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Volumn 85, Issue 1, 2013, Pages 341-348

Comparative analysis of sample preparation methods to handle the complexity of the blood fluid metabolome: When less is more

Author keywords

[No Author keywords available]

Indexed keywords

ANALYTICAL PROCEDURE; BIOLOGICAL VARIATION; BLOOD SAMPLES; COMPARATIVE ANALYSIS; DEPROTEINIZATION; ENDOGENOUS COMPOUND; ERROR PRONES; EXTRACTION PROCEDURE; HYBRID METHOD; INFORMATION COVERAGE; ION SUPPRESSION; LOW-MOLECULAR-WEIGHT SPECIES; MATRIX EFFECTS; METABOLOMES; METABOLOMIC ANALYSIS; METABOLOMIC STUDY; METABOLOMICS; PREPARATION METHOD; REPRODUCIBILITIES; SAMPLE HANDLING; SAMPLE PREPARATION; SAMPLE PREPARATION METHODS; SAMPLE PREPARATION PROCEDURE; SAMPLE PREPARATION TECHNIQUES; SELECTIVE REMOVAL; SERUM SAMPLES; SOLVENT FREE; SPIKED SAMPLES;

EID: 84871784197     PISSN: 00032700     EISSN: 15206882     Source Type: Journal    
DOI: 10.1021/ac302919t     Document Type: Article
Times cited : (128)

References (40)
  • 1
    • 33747856339 scopus 로고    scopus 로고
    • Metabolomics: Building on a century of biochemistry to guide human health
    • German, J. B.; Hammock, B. D.; Watkins, S. M. Metabolomics: Building on a century of biochemistry to guide human health Metabolomics 2005, 1 (1) 3-9
    • (2005) Metabolomics , vol.1 , Issue.1 , pp. 3-9
    • German, J.B.1    Hammock, B.D.2    Watkins, S.M.3
  • 2
    • 84871776424 scopus 로고    scopus 로고
    • Metabolomics Society Metabolomics. (accessed Sept. 15, 2012).
    • Metabolomics Society Metabolomics. http://www.metabolomicssociety.org/ metabolomics.html (accessed Sept. 15, 2012).
  • 3
    • 79251595354 scopus 로고    scopus 로고
    • The role of metabolites and metabolomics in clinically applicable biomarkers of disease
    • Mamas, M.; Dunn, W. B.; Neyses, L.; Goodacre, R. The role of metabolites and metabolomics in clinically applicable biomarkers of disease Arch. Toxicol. 2011, 85 (1) 5-17
    • (2011) Arch. Toxicol. , vol.85 , Issue.1 , pp. 5-17
    • Mamas, M.1    Dunn, W.B.2    Neyses, L.3    Goodacre, R.4
  • 5
    • 48749122465 scopus 로고    scopus 로고
    • Metabolic profiling of serum using ultra performance liquid chromatography and the LTQ-Orbitrap mass spectrometry system
    • Dunn, W. B.; Broadhurst, D.; Brown, M.; Baker, P. N.; Redman, C. W.; Kenny, L. C.; Kell, D. B. Metabolic profiling of serum using ultra performance liquid chromatography and the LTQ-Orbitrap mass spectrometry system J. Chromatogr. B 2008, 871 (2) 288-298
    • (2008) J. Chromatogr. B , vol.871 , Issue.2 , pp. 288-298
    • Dunn, W.B.1    Broadhurst, D.2    Brown, M.3    Baker, P.N.4    Redman, C.W.5    Kenny, L.C.6    Kell, D.B.7
  • 7
    • 67349192654 scopus 로고    scopus 로고
    • Critical evaluation of sample pretreatment techniques
    • Hyotylainen, T. Critical evaluation of sample pretreatment techniques Anal. Bioanal. Chem. 2009, 394 (3) 743-58
    • (2009) Anal. Bioanal. Chem. , vol.394 , Issue.3 , pp. 743-758
    • Hyotylainen, T.1
  • 10
    • 36148968834 scopus 로고    scopus 로고
    • Evaluation of a protocol for metabolic profiling studies on human blood plasma by combined ultra-performance liquid chromatography/mass spectrometry: From extraction to data analysis
    • Bruce, S. J.; Jonsson, P.; Antti, H.; Cloarec, O.; Trygg, J.; Marklund, S. L.; Moritz, T. Evaluation of a protocol for metabolic profiling studies on human blood plasma by combined ultra-performance liquid chromatography/mass spectrometry: From extraction to data analysis Anal. Biochem. 2008, 372 (2) 237-249
    • (2008) Anal. Biochem. , vol.372 , Issue.2 , pp. 237-249
    • Bruce, S.J.1    Jonsson, P.2    Antti, H.3    Cloarec, O.4    Trygg, J.5    Marklund, S.L.6    Moritz, T.7
  • 11
    • 65249146628 scopus 로고    scopus 로고
    • UPLC-MS-based analysis of human plasma for metabonomics using solvent precipitation or solid phase extraction
    • Michopoulos, F.; Lai, L.; Gika, H.; Theodoridis, G.; Wilson, I. UPLC-MS-based analysis of human plasma for metabonomics using solvent precipitation or solid phase extraction J. Proteome Res. 2009, 8 (4) 2114-2121
    • (2009) J. Proteome Res. , vol.8 , Issue.4 , pp. 2114-2121
    • Michopoulos, F.1    Lai, L.2    Gika, H.3    Theodoridis, G.4    Wilson, I.5
  • 13
    • 77952090855 scopus 로고    scopus 로고
    • Development and validation of a UPLC/MS method for a nutritional metabolomic study of human plasma
    • Pereira, H.; Martin, J.-F.; Joly, C.; Sébédio, J.-L.; Pujos-Guillot, E. Development and validation of a UPLC/MS method for a nutritional metabolomic study of human plasma Metabolomics 2010, 6 (2) 207-218
    • (2010) Metabolomics , vol.6 , Issue.2 , pp. 207-218
    • Pereira, H.1    Martin, J.-F.2    Joly, C.3    Sébédio, J.-L.4    Pujos-Guillot, E.5
  • 14
    • 79952679120 scopus 로고    scopus 로고
    • Metabolomic anatomy of an animal model revealing homeostatic imbalances in dyslipidaemia
    • Ooga, T.; Sato, H.; Nagashima, A.; Sasaki, K.; Tomita, M.; Soga, T.; Ohashi, Y. Metabolomic anatomy of an animal model revealing homeostatic imbalances in dyslipidaemia Mol. Biosyst. 2011, 7 (4) 1217-1223
    • (2011) Mol. Biosyst. , vol.7 , Issue.4 , pp. 1217-1223
    • Ooga, T.1    Sato, H.2    Nagashima, A.3    Sasaki, K.4    Tomita, M.5    Soga, T.6    Ohashi, Y.7
  • 15
    • 78449308741 scopus 로고    scopus 로고
    • Investigation of endogenous blood plasma phospholipids, cholesterol and glycerides that contribute to matrix effects in bioanalysis by liquid chromatography/mass spectrometry
    • Ismaiel, O. A.; Zhang, T.; Jenkins, R. G.; Karnes, H. T. Investigation of endogenous blood plasma phospholipids, cholesterol and glycerides that contribute to matrix effects in bioanalysis by liquid chromatography/mass spectrometry J. Chromatogr. B 2010, 878 (31) 3303-3316
    • (2010) J. Chromatogr. B , vol.878 , Issue.31 , pp. 3303-3316
    • Ismaiel, O.A.1    Zhang, T.2    Jenkins, R.G.3    Karnes, H.T.4
  • 16
    • 33645506527 scopus 로고    scopus 로고
    • Matrix effects on accurate mass measurements of low-molecular weight compounds using liquid chromatography-electrospray-quadrupole time-of-flight mass spectrometry
    • Calbiani, F.; Careri, M.; Elviri, L.; Mangia, A.; Zagnoni, I. Matrix effects on accurate mass measurements of low-molecular weight compounds using liquid chromatography-electrospray-quadrupole time-of-flight mass spectrometry J. Mass Spectrom. 2006, 41 (3) 289-294
    • (2006) J. Mass Spectrom. , vol.41 , Issue.3 , pp. 289-294
    • Calbiani, F.1    Careri, M.2    Elviri, L.3    Mangia, A.4    Zagnoni, I.5
  • 17
    • 48949118698 scopus 로고    scopus 로고
    • Metabolomics: Applications to food science and nutrition research
    • Wishart, D. S. Metabolomics: Applications to food science and nutrition research Trends Food Sci. Technol. 2008, 19 (9) 482-493
    • (2008) Trends Food Sci. Technol. , vol.19 , Issue.9 , pp. 482-493
    • Wishart, D.S.1
  • 20
    • 70449426567 scopus 로고    scopus 로고
    • An LC-MS-based metabolomics approach for exploring urinary metabolome modifications after cocoa consumption
    • Llorach, R.; Urpi-Sarda, M.; Jauregui, O.; Monagas, M.; Andres-Lacueva, C. An LC-MS-based metabolomics approach for exploring urinary metabolome modifications after cocoa consumption J. Proteome Res. 2009, 8 (11) 5060-5068
    • (2009) J. Proteome Res. , vol.8 , Issue.11 , pp. 5060-5068
    • Llorach, R.1    Urpi-Sarda, M.2    Jauregui, O.3    Monagas, M.4    Andres-Lacueva, C.5
  • 22
    • 33744828247 scopus 로고    scopus 로고
    • Effect of sample solvent on the chromatographic peak shape of analytes eluted under reversed-phase liquid chromatogaphic conditions
    • Keunchkarian, S.; Reta, M.; Romero, L.; Castells, C. Effect of sample solvent on the chromatographic peak shape of analytes eluted under reversed-phase liquid chromatogaphic conditions J. Chromatogr. A 2006, 1119 (1-2) 20-28
    • (2006) J. Chromatogr. A , vol.1119 , Issue.12 , pp. 20-28
    • Keunchkarian, S.1    Reta, M.2    Romero, L.3    Castells, C.4
  • 23
    • 78149388236 scopus 로고    scopus 로고
    • Metabolomics study of human urinary metabolome modifications after intake of almond (Prunus dulcis (Mill.) D.A. Webb) skin polyphenols
    • Llorach, R.; Garrido, I.; Monagas, M.; Urpi-Sarda, M.; Tulipani, S.; Bartolome, B.; Andres-Lacueva, C. Metabolomics study of human urinary metabolome modifications after intake of almond (Prunus dulcis (Mill.) D.A. Webb) skin polyphenols J. Proteome Res. 2010, 9 (11) 5859-5867
    • (2010) J. Proteome Res. , vol.9 , Issue.11 , pp. 5859-5867
    • Llorach, R.1    Garrido, I.2    Monagas, M.3    Urpi-Sarda, M.4    Tulipani, S.5    Bartolome, B.6    Andres-Lacueva, C.7
  • 25
    • 32444446805 scopus 로고    scopus 로고
    • XCMS: Processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification
    • Smith, C. A.; Want, E. J.; O'Maille, G.; Abagyan, R.; Siuzdak, G. XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification Anal. Chem. 2006, 78 (3) 779-787
    • (2006) Anal. Chem. , vol.78 , Issue.3 , pp. 779-787
    • Smith, C.A.1    Want, E.J.2    O'Maille, G.3    Abagyan, R.4    Siuzdak, G.5
  • 26
    • 84855402302 scopus 로고    scopus 로고
    • CAMERA: An integrated strategy for compound spectra extraction and annotation of liquid chromatography/mass spectrometry data sets
    • Kuhl, C.; Tautenhahn, R.; Bottcher, C.; Larson, T. R.; Neumann, S. CAMERA: An integrated strategy for compound spectra extraction and annotation of liquid chromatography/mass spectrometry data sets Anal. Chem. 2012, 84 (1) 283-289
    • (2012) Anal. Chem. , vol.84 , Issue.1 , pp. 283-289
    • Kuhl, C.1    Tautenhahn, R.2    Bottcher, C.3    Larson, T.R.4    Neumann, S.5
  • 27
    • 1642529511 scopus 로고    scopus 로고
    • Metagenes and molecular pattern discovery using matrix factorization
    • Brunet, J. P.; Tamayo, P.; Golub, T. R.; Mesirov, J. P. Metagenes and molecular pattern discovery using matrix factorization Proc. Natl. Acad. Sci. U.S.A. 2004, 101 (12) 4164-4169
    • (2004) Proc. Natl. Acad. Sci. U.S.A. , vol.101 , Issue.12 , pp. 4164-4169
    • Brunet, J.P.1    Tamayo, P.2    Golub, T.R.3    Mesirov, J.P.4
  • 28
    • 84858764020 scopus 로고    scopus 로고
    • Meta-analysis of untargeted metabolomic data from multiple profiling experiments
    • Patti, G. J.; Tautenhahn, R.; Siuzdak, G. Meta-analysis of untargeted metabolomic data from multiple profiling experiments Nat. Protoc. 2012, 7 (3) 508-516
    • (2012) Nat. Protoc. , vol.7 , Issue.3 , pp. 508-516
    • Patti, G.J.1    Tautenhahn, R.2    Siuzdak, G.3
  • 29
    • 48949086347 scopus 로고    scopus 로고
    • Global metabolic profiling analysis on human urine by UPLC-TOFMS: Issues and method validation in nutritional metabolomics
    • Guy, P. A.; Tavazzi, I.; Bruce, S. J.; Rramadan, Z.; Kochhar, S. Global metabolic profiling analysis on human urine by UPLC-TOFMS: Issues and method validation in nutritional metabolomics J. Chromatogr. B 2008, 871 (2) 253-260
    • (2008) J. Chromatogr. B , vol.871 , Issue.2 , pp. 253-260
    • Guy, P.A.1    Tavazzi, I.2    Bruce, S.J.3    Rramadan, Z.4    Kochhar, S.5
  • 30
    • 66149126908 scopus 로고    scopus 로고
    • Investigation of human blood plasma sample preparation for performing metabolomics using ultrahigh performance liquid chromatography/mass spectrometry
    • Bruce, S. J.; Tavazzi, I.; Parisod, V.; Rezzi, S.; Kochhar, S.; Guy, P. A. Investigation of human blood plasma sample preparation for performing metabolomics using ultrahigh performance liquid chromatography/mass spectrometry Anal. Chem. 2009, 81 (9) 3285-3296
    • (2009) Anal. Chem. , vol.81 , Issue.9 , pp. 3285-3296
    • Bruce, S.J.1    Tavazzi, I.2    Parisod, V.3    Rezzi, S.4    Kochhar, S.5    Guy, P.A.6
  • 31
    • 84875497782 scopus 로고    scopus 로고
    • The influence of citrate, EDTA, and heparin anticoagulants to human plasma LC-MS lipidomic profiling
    • DOI: 10.1007/s11306-012-0450-4.
    • Gonzalez-Covarrubias, V.; Dane, A.; Hankemeier, T.; Vreeken, R. The influence of citrate, EDTA, and heparin anticoagulants to human plasma LC-MS lipidomic profiling. Metabolomics 2012, DOI: 10.1007/s11306-012-0450-4.
    • (2012) Metabolomics
    • Gonzalez-Covarrubias, V.1    Dane, A.2    Hankemeier, T.3    Vreeken, R.4
  • 32
    • 84856500085 scopus 로고    scopus 로고
    • Metabolic fingerprinting of high-fat plasma samples processed by centrifugation- and filtration-based protein precipitation delineates significant differences in metabolite information coverage
    • Barri, T.; Holmer-Jensen, J.; Hermansen, K.; Dragsted, L. O. Metabolic fingerprinting of high-fat plasma samples processed by centrifugation- and filtration-based protein precipitation delineates significant differences in metabolite information coverage Anal. Chim. Acta 2012, 718, 47-57
    • (2012) Anal. Chim. Acta , vol.718 , pp. 47-57
    • Barri, T.1    Holmer-Jensen, J.2    Hermansen, K.3    Dragsted, L.O.4
  • 33
    • 84863977495 scopus 로고    scopus 로고
    • In-Vial Dual Extraction for Direct LC-MS Analysis of Plasma for Comprehensive and Highly Reproducible Metabolic Fingerprinting
    • Whiley, L.; Godzien, J.; Ruperez, F. J.; Legido-Quigley, C.; Barbas, C. In-Vial Dual Extraction for Direct LC-MS Analysis of Plasma for Comprehensive and Highly Reproducible Metabolic Fingerprinting Anal. Chem. 2012, 84 (14) 5992-5999
    • (2012) Anal. Chem. , vol.84 , Issue.14 , pp. 5992-5999
    • Whiley, L.1    Godzien, J.2    Ruperez, F.J.3    Legido-Quigley, C.4    Barbas, C.5
  • 37
    • 33746819836 scopus 로고    scopus 로고
    • Metabolomic approaches to phenotype characterization and applications to complex diseases
    • Oresic, M.; Vidal-Puig, A.; Hanninen, V. Metabolomic approaches to phenotype characterization and applications to complex diseases Expert Rev. Mol. Diagn. 2006, 6 (4) 575-585
    • (2006) Expert Rev. Mol. Diagn. , vol.6 , Issue.4 , pp. 575-585
    • Oresic, M.1    Vidal-Puig, A.2    Hanninen, V.3
  • 38
    • 77954956306 scopus 로고    scopus 로고
    • Lipidomics: Coming to grips with lipid diversity
    • Shevchenko, A.; Simons, K. Lipidomics: Coming to grips with lipid diversity Nat. Rev. Mol. Cell Biol. 2010, 11 (8) 593-8
    • (2010) Nat. Rev. Mol. Cell Biol. , vol.11 , Issue.8 , pp. 593-598
    • Shevchenko, A.1    Simons, K.2
  • 39
    • 22144478635 scopus 로고    scopus 로고
    • The emerging field of lipidomics
    • Wenk, M. R. The emerging field of lipidomics Nat. Rev. Drug Discovery 2005, 4 (7) 594-610
    • (2005) Nat. Rev. Drug Discovery , vol.4 , Issue.7 , pp. 594-610
    • Wenk, M.R.1


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