메뉴 건너뛰기




Volumn 7, Issue 12, 2012, Pages 1984-1993

Rational design of bioactive, modularly assembled aminoglycosides targeting the RNA that causes myotonic dystrophy type 1

Author keywords

[No Author keywords available]

Indexed keywords

AMINOGLYCOSIDE; MESSENGER RNA PRECURSOR;

EID: 84871602513     PISSN: 15548929     EISSN: 15548937     Source Type: Journal    
DOI: 10.1021/cb3001606     Document Type: Article
Times cited : (57)

References (48)
  • 1
    • 28144441826 scopus 로고    scopus 로고
    • The bacterial ribosome as a target for antibiotics
    • Poehlsgaard, J. and Douthwaite, S. (2005) The bacterial ribosome as a target for antibiotics Nat. Rev. Microbiol. 3, 870-881
    • (2005) Nat. Rev. Microbiol. , vol.3 , pp. 870-881
    • Poehlsgaard, J.1    Douthwaite, S.2
  • 2
    • 43149103943 scopus 로고    scopus 로고
    • Targeting RNA with small molecules
    • Thomas, J. R. and Hergenrother, P. J. (2008) Targeting RNA with small molecules Chem. Rev. 108, 1171-1224
    • (2008) Chem. Rev. , vol.108 , pp. 1171-1224
    • Thomas, J.R.1    Hergenrother, P.J.2
  • 3
    • 84856134636 scopus 로고    scopus 로고
    • Recent Advances in Developing Small Molecules Targeting RNA
    • Guan, L. and Disney, M. D. (2012) Recent Advances in Developing Small Molecules Targeting RNA ACS Chem. Biol. 7, 73-86
    • (2012) ACS Chem. Biol. , vol.7 , pp. 73-86
    • Guan, L.1    Disney, M.D.2
  • 4
    • 57849084800 scopus 로고    scopus 로고
    • Nucleic acids as therapeutic agents
    • Alvarez-Salas, L. M. (2008) Nucleic acids as therapeutic agents Curr. Top. Med. Chem. 8, 1379-1404
    • (2008) Curr. Top. Med. Chem. , vol.8 , pp. 1379-1404
    • Alvarez-Salas, L.M.1
  • 5
  • 6
    • 10044284093 scopus 로고    scopus 로고
    • Killing the messenger: Antisense DNA and siRNA
    • Nesterova, M. and Cho-Chung, Y. S. (2004) Killing the messenger: antisense DNA and siRNA Curr. Drug Targets 5, 683-689
    • (2004) Curr. Drug Targets , vol.5 , pp. 683-689
    • Nesterova, M.1    Cho-Chung, Y.S.2
  • 8
    • 0037255325 scopus 로고    scopus 로고
    • Oligodeoxynucleotide studies in primates: Antisense and immune stimulatory indications
    • Farman, C. A. and Kornbrust, D. J. (2003) Oligodeoxynucleotide studies in primates: antisense and immune stimulatory indications Toxicol. Pathol. 31 (Suppl.) 119-122
    • (2003) Toxicol. Pathol. , vol.31 , Issue.SUPPL. , pp. 119-122
    • Farman, C.A.1    Kornbrust, D.J.2
  • 9
    • 37349030751 scopus 로고    scopus 로고
    • A small molecule microarray platform to select RNA internal loop-ligand interactions
    • Childs-Disney, J. L., Wu, M., Pushechnikov, A., Aminova, O., and Disney, M. D. (2007) A small molecule microarray platform to select RNA internal loop-ligand interactions ACS Chem. Biol. 2, 745-754
    • (2007) ACS Chem. Biol. , vol.2 , pp. 745-754
    • Childs-Disney, J.L.1    Wu, M.2    Pushechnikov, A.3    Aminova, O.4    Disney, M.D.5
  • 11
    • 79959902464 scopus 로고    scopus 로고
    • Defining the RNA internal loops preferred by benzimidazole derivatives via 2D combinatorial screening and computational analysis
    • Velagapudi, S. P., Seedhouse, S. J., French, J., and Disney, M. D. (2011) Defining the RNA internal loops preferred by benzimidazole derivatives via 2D combinatorial screening and computational analysis J. Am. Chem. Soc. 133, 10111-10118
    • (2011) J. Am. Chem. Soc. , vol.133 , pp. 10111-10118
    • Velagapudi, S.P.1    Seedhouse, S.J.2    French, J.3    Disney, M.D.4
  • 12
    • 34250367088 scopus 로고    scopus 로고
    • Using selection to identify and chemical microarray to study the RNA internal loops recognized by 6′- N -acylated kanamycin A
    • Disney, M. D. and Childs-Disney, J. L. (2007) Using selection to identify and chemical microarray to study the RNA internal loops recognized by 6′- N -acylated kanamycin A ChemBioChem 8, 649-656
    • (2007) ChemBioChem , vol.8 , pp. 649-656
    • Disney, M.D.1    Childs-Disney, J.L.2
  • 13
    • 65749087933 scopus 로고    scopus 로고
    • Rational and modular design of potent ligands targeting the RNA that causes myotonic dystrophy 2
    • Lee, M. M., Pushechnikov, A., and Disney, M. D. (2009) Rational and modular design of potent ligands targeting the RNA that causes myotonic dystrophy 2 ACS Chem. Biol. 4, 345-355
    • (2009) ACS Chem. Biol. , vol.4 , pp. 345-355
    • Lee, M.M.1    Pushechnikov, A.2    Disney, M.D.3
  • 14
    • 67650506996 scopus 로고    scopus 로고
    • Rational design of ligands targeting triplet repeating transcripts that cause RNA dominant disease: Application to myotonic muscular dystrophy type 1 and spinocerebellar ataxia type 3
    • Pushechnikov, A., Lee, M. M., Childs-Disney, J. L., Sobczak, K., French, J. M., Thornton, C. A., and Disney, M. D. (2009) Rational design of ligands targeting triplet repeating transcripts that cause RNA dominant disease: application to myotonic muscular dystrophy type 1 and spinocerebellar ataxia type 3 J. Am. Chem. Soc. 131, 9767-9779
    • (2009) J. Am. Chem. Soc. , vol.131 , pp. 9767-9779
    • Pushechnikov, A.1    Lee, M.M.2    Childs-Disney, J.L.3    Sobczak, K.4    French, J.M.5    Thornton, C.A.6    Disney, M.D.7
  • 15
    • 72249122539 scopus 로고    scopus 로고
    • Controlling the specificity of modularly assembled small molecules for RNA via ligand module spacing: Targeting the RNAs that cause myotonic muscular dystrophy
    • Lee, M. M., Childs-Disney, J. L., Pushechnikov, A., French, J. M., Sobczak, K., Thornton, C. A., and Disney, M. D. (2009) Controlling the specificity of modularly assembled small molecules for RNA via ligand module spacing: targeting the RNAs that cause myotonic muscular dystrophy J. Am. Chem. Soc. 131, 17464-17472
    • (2009) J. Am. Chem. Soc. , vol.131 , pp. 17464-17472
    • Lee, M.M.1    Childs-Disney, J.L.2    Pushechnikov, A.3    French, J.M.4    Sobczak, K.5    Thornton, C.A.6    Disney, M.D.7
  • 16
    • 76649144805 scopus 로고    scopus 로고
    • The role of flexibility in the rational design of modularly assembled ligands targeting the RNAs that cause the myotonic dystrophies
    • Disney, M. D., Lee, M. M., Pushechnikov, A., and Childs-Disney, J. L. (2010) The role of flexibility in the rational design of modularly assembled ligands targeting the RNAs that cause the myotonic dystrophies ChemBioChem 11, 375-382
    • (2010) ChemBioChem , vol.11 , pp. 375-382
    • Disney, M.D.1    Lee, M.M.2    Pushechnikov, A.3    Childs-Disney, J.L.4
  • 19
    • 0037443035 scopus 로고    scopus 로고
    • Pre-mRNA splicing and human disease
    • Faustino, N. A. and Cooper, T. A. (2003) Pre-mRNA splicing and human disease Genes Dev. 17, 419-437
    • (2003) Genes Dev. , vol.17 , pp. 419-437
    • Faustino, N.A.1    Cooper, T.A.2
  • 21
    • 0032076126 scopus 로고    scopus 로고
    • Disruption of splicing regulated by a CUG-binding protein in myotonic dystrophy
    • Philips, A. V., Timchenko, L. T., and Cooper, T. A. (1998) Disruption of splicing regulated by a CUG-binding protein in myotonic dystrophy Science 280, 737-741
    • (1998) Science , vol.280 , pp. 737-741
    • Philips, A.V.1    Timchenko, L.T.2    Cooper, T.A.3
  • 22
    • 33646948225 scopus 로고    scopus 로고
    • Intracellular cargo delivery by an octaarginine transporter adapted to target prostate cancer cells through cell surface protease activation
    • Goun, E. A., Shinde, R., Dehnert, K. W., Adams-Bond, A., Wender, P. A., Contag, C. H., and Franc, B. L. (2006) Intracellular cargo delivery by an octaarginine transporter adapted to target prostate cancer cells through cell surface protease activation Bioconjugate Chem. 17, 787-796
    • (2006) Bioconjugate Chem. , vol.17 , pp. 787-796
    • Goun, E.A.1    Shinde, R.2    Dehnert, K.W.3    Adams-Bond, A.4    Wender, P.A.5    Contag, C.H.6    Franc, B.L.7
  • 23
    • 33749656235 scopus 로고    scopus 로고
    • Molecular transporters: Synthesis of oligoguanidinium transporters and their application to drug delivery and real-time imaging
    • Goun, E. A., Pillow, T. H., Jones, L. R., Rothbard, J. B., and Wender, P. A. (2006) Molecular transporters: synthesis of oligoguanidinium transporters and their application to drug delivery and real-time imaging ChemBioChem 7, 1497-1515
    • (2006) ChemBioChem , vol.7 , pp. 1497-1515
    • Goun, E.A.1    Pillow, T.H.2    Jones, L.R.3    Rothbard, J.B.4    Wender, P.A.5
  • 24
    • 0141954275 scopus 로고    scopus 로고
    • Cellular uptake of aminoglycosides, guanidinoglycosides, and poly-arginine
    • Luedtke, N. W., Carmichael, P., and Tor, Y. (2003) Cellular uptake of aminoglycosides, guanidinoglycosides, and poly-arginine J. Am. Chem. Soc. 125, 12374-12375
    • (2003) J. Am. Chem. Soc. , vol.125 , pp. 12374-12375
    • Luedtke, N.W.1    Carmichael, P.2    Tor, Y.3
  • 25
    • 0024262589 scopus 로고
    • Cellular uptake of the tat protein from human immunodeficiency virus
    • Frankel, A. D. and Pabo, C. O. (1988) Cellular uptake of the tat protein from human immunodeficiency virus Cell 55, 1189-1193
    • (1988) Cell , vol.55 , pp. 1189-1193
    • Frankel, A.D.1    Pabo, C.O.2
  • 26
    • 34948864433 scopus 로고    scopus 로고
    • Muscleblind-like protein 1 nuclear sequestration is a molecular pathology marker of DM1 and DM2
    • Cardani, R., Mancinelli, E., Rotondo, G., Sansone, V., and Meola, G. (2006) Muscleblind-like protein 1 nuclear sequestration is a molecular pathology marker of DM1 and DM2 Eur. J. Histochem. 50, 177-182
    • (2006) Eur. J. Histochem. , vol.50 , pp. 177-182
    • Cardani, R.1    Mancinelli, E.2    Rotondo, G.3    Sansone, V.4    Meola, G.5
  • 27
    • 20044371186 scopus 로고    scopus 로고
    • Woodchuck post-transcriptional element induces nuclear export of myotonic dystrophy 3′ untranslated region transcripts
    • Mastroyiannopoulos, N. P., Feldman, M. L., Uney, J. B., Mahadevan, M. S., and Phylactou, L. A. (2005) Woodchuck post-transcriptional element induces nuclear export of myotonic dystrophy 3′ untranslated region transcripts EMBO Rep. 6, 458-463
    • (2005) EMBO Rep. , vol.6 , pp. 458-463
    • Mastroyiannopoulos, N.P.1    Feldman, M.L.2    Uney, J.B.3    Mahadevan, M.S.4    Phylactou, L.A.5
  • 28
    • 0032837677 scopus 로고    scopus 로고
    • Cis and trans effects of the myotonic dystrophy (DM) mutation in a cell culture model
    • Amack, J. D., Paguio, A. P., and Mahadevan, M. S. (1999) Cis and trans effects of the myotonic dystrophy (DM) mutation in a cell culture model Hum. Mol. Genet. 8, 1975-1984
    • (1999) Hum. Mol. Genet. , vol.8 , pp. 1975-1984
    • Amack, J.D.1    Paguio, A.P.2    Mahadevan, M.S.3
  • 29
    • 11044233708 scopus 로고    scopus 로고
    • Myotonic dystrophy type 1 is associated with nuclear foci of mutant RNA, sequestration of muscleblind proteins and deregulated alternative splicing in neurons
    • Jiang, H., Mankodi, A., Swanson, M. S., Moxley, R. T., and Thornton, C. A. (2004) Myotonic dystrophy type 1 is associated with nuclear foci of mutant RNA, sequestration of muscleblind proteins and deregulated alternative splicing in neurons Hum. Mol. Genet. 13, 3079-3088
    • (2004) Hum. Mol. Genet. , vol.13 , pp. 3079-3088
    • Jiang, H.1    Mankodi, A.2    Swanson, M.S.3    Moxley, R.T.4    Thornton, C.A.5
  • 30
    • 80052716635 scopus 로고    scopus 로고
    • Cellular toxicity of expanded RNA repeats: Focus on RNA foci
    • Wojciechowska, M. and Krzyzosiak, W. J. (2011) Cellular toxicity of expanded RNA repeats: focus on RNA foci Hum. Mol. Genet. 20, 3811-3821
    • (2011) Hum. Mol. Genet. , vol.20 , pp. 3811-3821
    • Wojciechowska, M.1    Krzyzosiak, W.J.2
  • 31
    • 84862105985 scopus 로고    scopus 로고
    • Rationally designed small molecules targeting the RNA that causes myotonic dystrophy type 1 are potently bioactive
    • Childs-Disney, J. L., Hoskins, J., Rzuczek, S., Thornton, C., and Disney, M. D. (2012) Rationally designed small molecules targeting the RNA that causes myotonic dystrophy type 1 are potently bioactive ACS Chem. Biol. 7, 856-862
    • (2012) ACS Chem. Biol. , vol.7 , pp. 856-862
    • Childs-Disney, J.L.1    Hoskins, J.2    Rzuczek, S.3    Thornton, C.4    Disney, M.D.5
  • 33
    • 79960344743 scopus 로고    scopus 로고
    • Influencing uptake and localization of aminoglycoside-functionalized peptoids
    • Lee, M. M., French, J. M., and Disney, M. D. (2011) Influencing uptake and localization of aminoglycoside-functionalized peptoids Mol. BioSyst. 7, 2441-2451
    • (2011) Mol. BioSyst. , vol.7 , pp. 2441-2451
    • Lee, M.M.1    French, J.M.2    Disney, M.D.3
  • 34
    • 34249943356 scopus 로고    scopus 로고
    • Polyspecific organic cation transporters: Structure, function, physiological roles, and biopharmaceutical implications
    • Koepsell, H., Lips, K., and Volk, C. (2007) Polyspecific organic cation transporters: structure, function, physiological roles, and biopharmaceutical implications Pharm. Res. 24, 1227-1251
    • (2007) Pharm. Res. , vol.24 , pp. 1227-1251
    • Koepsell, H.1    Lips, K.2    Volk, C.3
  • 35
    • 1542327642 scopus 로고    scopus 로고
    • Pathway for polyarginine entry into mammalian cells
    • Fuchs, S. M. and Raines, R. T. (2004) Pathway for polyarginine entry into mammalian cells Biochemistry 43, 2438-2444
    • (2004) Biochemistry , vol.43 , pp. 2438-2444
    • Fuchs, S.M.1    Raines, R.T.2
  • 36
    • 0031657808 scopus 로고    scopus 로고
    • Matrix proteoglycans: From molecular design to cellular function
    • Iozzo, R. V. (1998) Matrix proteoglycans: from molecular design to cellular function Annu. Rev. Biochem. 67, 609-652
    • (1998) Annu. Rev. Biochem. , vol.67 , pp. 609-652
    • Iozzo, R.V.1
  • 37
    • 0032476812 scopus 로고    scopus 로고
    • Polyvalent interactions in biological systems: Implications for design and use of multivalent ligands and inhibitors
    • Mammen, M., Choi, S. K., and Whitesides, G. M. (1998) Polyvalent interactions in biological systems: Implications for design and use of multivalent ligands and inhibitors Angew. Chem., Int. Ed. 37, 2755-2794
    • (1998) Angew. Chem., Int. Ed. , vol.37 , pp. 2755-2794
    • Mammen, M.1    Choi, S.K.2    Whitesides, G.M.3
  • 39
    • 34047160522 scopus 로고    scopus 로고
    • Expression of MBNL and CELF mRNA transcripts in muscles with myotonic dystrophy
    • Nezu, Y., Kino, Y., Sasagawa, N., Nishino, I., and Ishiura, S. (2007) Expression of MBNL and CELF mRNA transcripts in muscles with myotonic dystrophy Neuromuscul. Disord. 17, 306-312
    • (2007) Neuromuscul. Disord. , vol.17 , pp. 306-312
    • Nezu, Y.1    Kino, Y.2    Sasagawa, N.3    Nishino, I.4    Ishiura, S.5
  • 40
    • 36248932588 scopus 로고    scopus 로고
    • MBNL binds similar RNA structures in the CUG repeats of myotonic dystrophy and its pre-mRNA substrate cardiac troponin T
    • Warf, M. B. and Berglund, J. A. (2007) MBNL binds similar RNA structures in the CUG repeats of myotonic dystrophy and its pre-mRNA substrate cardiac troponin T RNA 13, 2238-2251
    • (2007) RNA , vol.13 , pp. 2238-2251
    • Warf, M.B.1    Berglund, J.A.2
  • 41
    • 0036347525 scopus 로고    scopus 로고
    • Expanded CUG repeats trigger aberrant splicing of ClC-1 chloride channel pre-mRNA and hyperexcitability of skeletal muscle in myotonic dystrophy
    • Mankodi, A., Takahashi, M. P., Jiang, H., Beck, C. L., Bowers, W. J., Moxley, R. T., Cannon, S. C., and Thornton, C. A. (2002) Expanded CUG repeats trigger aberrant splicing of ClC-1 chloride channel pre-mRNA and hyperexcitability of skeletal muscle in myotonic dystrophy Mol. Cell 10, 35-44
    • (2002) Mol. Cell , vol.10 , pp. 35-44
    • Mankodi, A.1    Takahashi, M.P.2    Jiang, H.3    Beck, C.L.4    Bowers, W.J.5    Moxley, R.T.6    Cannon, S.C.7    Thornton, C.A.8
  • 42
    • 0036347927 scopus 로고    scopus 로고
    • Loss of the muscle-specific chloride channel in type 1 myotonic dystrophy due to misregulated alternative splicing
    • Charlet, B. N., Savkur, R. S., Singh, G., Philips, A. V., Grice, E. A., and Cooper, T. A. (2002) Loss of the muscle-specific chloride channel in type 1 myotonic dystrophy due to misregulated alternative splicing Mol. Cell 10, 45-53
    • (2002) Mol. Cell , vol.10 , pp. 45-53
    • Charlet, B.N.1    Savkur, R.S.2    Singh, G.3    Philips, A.V.4    Grice, E.A.5    Cooper, T.A.6
  • 48
    • 0016175370 scopus 로고
    • Theoretical aspects of DNA-protein interactions: Cooperative and non-cooperative binding of large ligands to a one-dimensional homogeneous lattice
    • McGhee, J. D. and Hippel, P. H. V. (1974) Theoretical aspects of DNA-protein interactions: cooperative and non-cooperative binding of large ligands to a one-dimensional homogeneous lattice J. Mol. Biol. 86, 469-489
    • (1974) J. Mol. Biol. , vol.86 , pp. 469-489
    • McGhee, J.D.1    Hippel, P.H.V.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.