-
1
-
-
67650812332
-
RIP3, an energy metabolism regulator that switches TNF-induced cell death from apoptosis to necrosis
-
Zhang, D. W., Shao, J., Lin, J., Zhang, N., Lu, B. J., Lin, S. C., Dong, M. Q., and Han, J. (2009) RIP3, an energy metabolism regulator that switches TNF-induced cell death from apoptosis to necrosis. Science 325, 332-336
-
(2009)
Science
, vol.325
, pp. 332-336
-
-
Zhang, D.W.1
Shao, J.2
Lin, J.3
Zhang, N.4
Lu, B.J.5
Lin, S.C.6
Dong, M.Q.7
Han, J.8
-
2
-
-
66449133280
-
Phosphorylation-driven assembly of the RIP1-RIP3 complex regulates programmed necrosis and virus-induced inflammation
-
Cho, Y. S., Challa, S., Moquin, D., Genga, R., Ray, T. D., Guildford, M., and Chan, F. K. (2009) Phosphorylation-driven assembly of the RIP1-RIP3 complex regulates programmed necrosis and virus-induced inflammation. Cell 137, 1112-1123
-
(2009)
Cell
, vol.137
, pp. 1112-1123
-
-
Cho, Y.S.1
Challa, S.2
Moquin, D.3
Genga, R.4
Ray, T.D.5
Guildford, M.6
Chan, F.K.7
-
3
-
-
66749183275
-
Receptor interacting protein kinase-3 determines cellular necrotic response to TNF-alpha
-
He, S., Wang, L., Miao, L., Wang, T., Du, F., Zhao, L., and Wang, X. (2009) Receptor interacting protein kinase-3 determines cellular necrotic response to TNF-alpha. Cell 137, 1100-1111
-
(2009)
Cell
, vol.137
, pp. 1100-1111
-
-
He, S.1
Wang, L.2
Miao, L.3
Wang, T.4
Du, F.5
Zhao, L.6
Wang, X.7
-
4
-
-
77954593965
-
Virus inhibition of RIP3-dependent necrosis
-
Upton, J. W., Kaiser, W. J., and Mocarski, E. S. (2010) Virus inhibition of RIP3-dependent necrosis. Cell Host Microbe 7, 302-313
-
(2010)
Cell Host Microbe
, vol.7
, pp. 302-313
-
-
Upton, J.W.1
Kaiser, W.J.2
Mocarski, E.S.3
-
5
-
-
79960921946
-
The Ripoptosome, a signaling platform that assembles in response to genotoxic stress and loss of IAPs
-
Tenev, T., Bianchi, K., Darding, M., Broemer, M., Langlais, C., Wallberg, F., Zachariou, A., Lopez, J., MacFarlane, M., Cain, K., and Meier, P. (2011) The Ripoptosome, a signaling platform that assembles in response to genotoxic stress and loss of IAPs. Mol. Cell. 43, 432-448
-
(2011)
Mol. Cell.
, vol.43
, pp. 432-448
-
-
Tenev, T.1
Bianchi, K.2
Darding, M.3
Broemer, M.4
Langlais, C.5
Wallberg, F.6
Zachariou, A.7
Lopez, J.8
MacFarlane, M.9
Cain, K.10
Meier, P.11
-
6
-
-
81255195542
-
Programmed necrosis: Backup to and competitor with apoptosis in the immune system
-
Han, J., Zhong, C. Q., and Zhang, D. W. (2011) Programmed necrosis: backup to and competitor with apoptosis in the immune system. Nat. Immunol. 12, 1143-1149
-
(2011)
Nat. Immunol.
, vol.12
, pp. 1143-1149
-
-
Han, J.1
Zhong, C.Q.2
Zhang, D.W.3
-
7
-
-
77957105977
-
Molecular mechanisms of necroptosis: An ordered cellular explosion
-
Vandenabeele, P., Galluzzi, L., Vanden Berghe, T., and Kroemer, G. (2010) Molecular mechanisms of necroptosis: an ordered cellular explosion. Nat. Rev. Mol. Cell Biol. 11, 700-714
-
(2010)
Nat. Rev. Mol. Cell Biol.
, vol.11
, pp. 700-714
-
-
Vandenabeele, P.1
Galluzzi, L.2
Vanden Berghe, T.3
Kroemer, G.4
-
8
-
-
79960922705
-
CIAPs block Ripoptosome formation, a RIP1/caspase-8 containing intracellular cell death complex differentially regulated by cFLIP isoforms
-
Feoktistova, M., Geserick, P., Kellert, B., Dimitrova, D. P., Langlais, C., Hupe, M., Cain, K., MacFarlane, M., Häcker, G., and Leverkus, M. (2011) cIAPs block Ripoptosome formation, a RIP1/caspase-8 containing intracellular cell death complex differentially regulated by cFLIP isoforms. Mol. Cell. 43, 449-463
-
(2011)
Mol. Cell.
, vol.43
, pp. 449-463
-
-
Feoktistova, M.1
Geserick, P.2
Kellert, B.3
Dimitrova, D.P.4
Langlais, C.5
Hupe, M.6
Cain, K.7
MacFarlane, M.8
Häcker, G.9
Leverkus, M.10
-
9
-
-
79952811804
-
RIP3 mediates the embryonic lethality of caspase-8-deficient mice
-
Kaiser, W. J., Upton, J. W., Long, A. B., Livingston-Rosanoff, D., Daley-Bauer, L. P., Hakem, R., Caspary, T., and Mocarski, E. S. (2011) RIP3 mediates the embryonic lethality of caspase-8-deficient mice. Nature 471, 368-372
-
(2011)
Nature
, vol.471
, pp. 368-372
-
-
Kaiser, W.J.1
Upton, J.W.2
Long, A.B.3
Livingston-Rosanoff, D.4
Daley-Bauer, L.P.5
Hakem, R.6
Caspary, T.7
Mocarski, E.S.8
-
10
-
-
79952810024
-
Catalytic activity of the caspase-8-FLIP(L) complex inhibits RIPK3-dependent necrosis
-
Oberst, A., Dillon, C. P., Weinlich, R., McCormick, L. L., Fitzgerald, P., Pop, C., Hakem, R., Salvesen, G. S., and Green, D. R. (2011) Catalytic activity of the caspase-8-FLIP(L) complex inhibits RIPK3-dependent necrosis. Nature 471, 363-367
-
(2011)
Nature
, vol.471
, pp. 363-367
-
-
Oberst, A.1
Dillon, C.P.2
Weinlich, R.3
McCormick, L.L.4
Fitzgerald, P.5
Pop, C.6
Hakem, R.7
Salvesen, G.S.8
Green, D.R.9
-
11
-
-
84862907788
-
Mixed lineage kinase domain-like protein mediates necrosis signaling downstream of RIP3 kinase
-
Sun, L., Wang, H., Wang, Z., He, S., Chen, S., Liao, D., Wang, L., Yan, J., Liu, W., Lei, X., and Wang, X. (2012) Mixed lineage kinase domain-like protein mediates necrosis signaling downstream of RIP3 kinase. Cell 148, 213-227
-
(2012)
Cell
, vol.148
, pp. 213-227
-
-
Sun, L.1
Wang, H.2
Wang, Z.3
He, S.4
Chen, S.5
Liao, D.6
Wang, L.7
Yan, J.8
Liu, W.9
Lei, X.10
Wang, X.11
-
12
-
-
84862909353
-
The mitochondrial phosphatase PGAM5 functions at the convergence point of multiple necrotic death pathways
-
Wang, Z., Jiang, H., Chen, S., Du, F., and Wang, X. (2012) The mitochondrial phosphatase PGAM5 functions at the convergence point of multiple necrotic death pathways. Cell 148, 228-243
-
(2012)
Cell
, vol.148
, pp. 228-243
-
-
Wang, Z.1
Jiang, H.2
Chen, S.3
Du, F.4
Wang, X.5
-
13
-
-
84859467770
-
Mixed lineage kinase domain-like is a key receptor interacting protein 3 downstream component of TNF-induced necrosis
-
Zhao, J., Jitkaew, S., Cai, Z., Choksi, S., Li, Q., Luo, J., and Liu, Z. G. (2012) Mixed lineage kinase domain-like is a key receptor interacting protein 3 downstream component of TNF-induced necrosis. Proc. Natl. Acad. Sci. U.S.A. 109, 5322-5327
-
(2012)
Proc. Natl. Acad. Sci. U.S.A.
, vol.109
, pp. 5322-5327
-
-
Zhao, J.1
Jitkaew, S.2
Cai, Z.3
Choksi, S.4
Li, Q.5
Luo, J.6
Liu, Z.G.7
-
14
-
-
80555134729
-
Quantitative phosphoproteomics to investigate the polo-like kinase 1-dependent phosphoproteome
-
Grosstessner-Hain, K., Hegemann, B., Novatchkova, M., Rameseder, J., Joughin, B. A., Hudecz, O., Roitinger, E., Pichler, P., Kraut, N., Yaffe, M. B., Peters, J. M., and Mechtler, K. (2011) Quantitative phosphoproteomics to investigate the polo-like kinase 1-dependent phosphoproteome. Mol. Cell. Proteomics 10, M111.008540
-
(2011)
Mol. Cell. Proteomics
, vol.10
-
-
Grosstessner-Hain, K.1
Hegemann, B.2
Novatchkova, M.3
Rameseder, J.4
Joughin, B.A.5
Hudecz, O.6
Roitinger, E.7
Pichler, P.8
Kraut, N.9
Yaffe, M.B.10
Peters, J.M.11
Mechtler, K.12
-
15
-
-
79960815170
-
Quantitative phosphoproteomics of transforming growth factor-beta signaling in colon cancer cells
-
Ali, N. A., and Molloy, M. P. (2011) Quantitative phosphoproteomics of transforming growth factor-beta signaling in colon cancer cells. Proteomics 11, 3390-3401
-
(2011)
Proteomics
, vol.11
, pp. 3390-3401
-
-
Ali, N.A.1
Molloy, M.P.2
-
16
-
-
84859815885
-
Combination of chemical genetics and phosphoproteomics for kinase signaling analysis enables confident identification of cellular downstream targets
-
Oppermann, F. S., Grundner-Culemann, K., Kumar, C., Gruss, O. J., Jallepalli, P. V., and Daub, H. (2011) Combination of chemical genetics and phosphoproteomics for kinase signaling analysis enables confident identification of cellular downstream targets. Mol. Cell. Proteomics 10, O111.012351
-
(2011)
Mol. Cell. Proteomics
, vol.10
-
-
Oppermann, F.S.1
Grundner-Culemann, K.2
Kumar, C.3
Gruss, O.J.4
Jallepalli, P.V.5
Daub, H.6
-
17
-
-
78650466243
-
A tissue-specific atlas of mouse protein phosphorylation and expression
-
Huttlin, E. L., Jedrychowski, M. P., Elias, J. E., Goswami, T., Rad, R., Beausoleil, S. A., Villén, J., Haas, W., Sowa, M. E., and Gygi, S. P. (2010) A tissue-specific atlas of mouse protein phosphorylation and expression. Cell 143, 1174-1189
-
(2010)
Cell
, vol.143
, pp. 1174-1189
-
-
Huttlin, E.L.1
Jedrychowski, M.P.2
Elias, J.E.3
Goswami, T.4
Rad, R.5
Beausoleil, S.A.6
Villén, J.7
Haas, W.8
Sowa, M.E.9
Gygi, S.P.10
-
18
-
-
72449196261
-
Global effects of kinase inhibitors on signaling networks revealed by quantitative phosphoproteomics
-
Pan, C., Olsen, J. V., Daub, H., and Mann, M. (2009) Global effects of kinase inhibitors on signaling networks revealed by quantitative phosphoproteomics. Mol. Cell. Proteomics 8, 2796-2808
-
(2009)
Mol. Cell. Proteomics
, vol.8
, pp. 2796-2808
-
-
Pan, C.1
Olsen, J.V.2
Daub, H.3
Mann, M.4
-
19
-
-
43849091451
-
Hydrophilic interaction chromatography reduces the complexity of the phosphoproteome and improves global phosphopeptide isolation and detection
-
DOI 10.1074/mcp.M700543-MCP200
-
McNulty, D. E., and Annan, R. S. (2008) Hydrophilic interaction chromatography reduces the complexity of the phosphoproteome and improves global phosphopeptide isolation and detection. Mol. Cell. Proteomics 7, 971-980 (Pubitemid 351737096)
-
(2008)
Molecular and Cellular Proteomics
, vol.7
, Issue.5
, pp. 971-980
-
-
McNulty, D.E.1
Annan, R.S.2
-
20
-
-
47849125967
-
A multidimensional chromatography technology for in-depth phosphoproteome analysis
-
DOI 10.1074/mcp.M700468-MCP200
-
Albuquerque, C. P., Smolka, M. B., Payne, S. H., Bafna, V., Eng, J., and Zhou, H. (2008) A multidimensional chromatography technology for in-depth phosphoproteome analysis. Mol. Cell. Proteomics 7, 1389-1396 (Pubitemid 352038280)
-
(2008)
Molecular and Cellular Proteomics
, vol.7
, Issue.7
, pp. 1389-1396
-
-
Albuquerque, C.P.1
Smolka, M.B.2
Payne, S.H.3
Bafna, V.4
Eng, J.5
Zhou, H.6
-
21
-
-
55849105589
-
Quantitative phosphoproteomics-an emerging key technology in signal-transduction research
-
Schreiber, T. B., Mäusbacher, N., Breitkopf, S. B., Grundner-Culemann, K., and Daub, H. (2008) Quantitative phosphoproteomics-an emerging key technology in signal-transduction research. Proteomics 8, 4416-4432
-
(2008)
Proteomics
, vol.8
, pp. 4416-4432
-
-
Schreiber, T.B.1
Mäusbacher, N.2
Breitkopf, S.B.3
Grundner-Culemann, K.4
Daub, H.5
-
22
-
-
84855932755
-
Advances in Quantitative Phosphoproteomics
-
Nilsson, C. L. (2011) Advances in Quantitative Phosphoproteomics. Anal. Chem. 84, 735-746
-
(2011)
Anal. Chem.
, vol.84
, pp. 735-746
-
-
Nilsson, C.L.1
-
23
-
-
47549099572
-
SILAC Mouse for Quantitative Proteomics Uncovers Kindlin-3 as an Essential Factor for Red Blood Cell Function
-
DOI 10.1016/j.cell.2008.05.033, PII S0092867408006958
-
Krüger, M., Moser, M., Ussar, S., Thievessen, I., Luber, C. A., Forner, F., Schmidt, S., Zanivan, S., Fässler, R., and Mann, M. (2008) SILAC mouse for quantitative proteomics uncovers kindlin-3 as an essential factor for red blood cell function. Cell 134, 353-364 (Pubitemid 352010327)
-
(2008)
Cell
, vol.134
, Issue.2
, pp. 353-364
-
-
Kruger, M.1
Moser, M.2
Ussar, S.3
Thievessen, I.4
Luber, C.A.5
Forner, F.6
Schmidt, S.7
Zanivan, S.8
Fassler, R.9
Mann, M.10
-
24
-
-
79961014854
-
Large-scale phosphosite quantification in tissues by a spike-in SILAC method
-
Monetti, M., Nagaraj, N., Sharma, K., and Mann, M. (2011) Large-scale phosphosite quantification in tissues by a spike-in SILAC method. Nat. Methods 8, 655-658
-
(2011)
Nat. Methods
, vol.8
, pp. 655-658
-
-
Monetti, M.1
Nagaraj, N.2
Sharma, K.3
Mann, M.4
-
25
-
-
22844436250
-
Quantitative mouse brain proteomics using culture-derived isotope tags as internal standards
-
DOI 10.1038/nbt1086
-
Ishihama, Y., Sato, T., Tabata, T., Miyamoto, N., Sagane, K., Nagasu, T., and Oda, Y. (2005) Quantitative mouse brain proteomics using culturederived isotope tags as internal standards. Nat. Biotechnol. 23, 617-621 (Pubitemid 41724902)
-
(2005)
Nature Biotechnology
, vol.23
, Issue.5
, pp. 617-621
-
-
Ishihama, Y.1
Sato, T.2
Tabata, T.3
Miyamoto, N.4
Sagane, K.5
Nagasu, T.6
Oda, Y.7
-
26
-
-
0842304221
-
Kinase RIP3 Is Dispensable for Normal NF-κBs, Signaling by the B-Cell and T-Cell Receptors, Tumor Necrosis Factor Receptor 1, and Toll-Like Receptors 2 and 4
-
DOI 10.1128/MCB.24.4.1464-1469.2004
-
Newton, K., Sun, X., and Dixit, V. M. (2004) Kinase RIP3 is dispensable for normal NF-kappa Bs, signaling by the B-cell and T-cell receptors, tumor necrosis factor receptor 1, and Toll-like receptors 2 and 4. Mol. Cell. Biol. 24, 1464-1469 (Pubitemid 38167070)
-
(2004)
Molecular and Cellular Biology
, vol.24
, Issue.4
, pp. 1464-1469
-
-
Newton, K.1
Sun, X.2
Dixit, V.M.3
-
27
-
-
80052403225
-
Phosphorylation of Raptor by p38beta participates in arsenite-induced mammalian target of rapamycin complex 1 (mTORC1) activation
-
Wu, X. N., Wang, X. K., Wu, S. Q., Lu, J., Zheng, M., Wang, Y. H., Zhou, H., Zhang, H., and Han, J. (2011) Phosphorylation of Raptor by p38beta participates in arsenite-induced mammalian target of rapamycin complex 1 (mTORC1) activation. J. Biol. Chem. 286, 31501-31511
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 31501-31511
-
-
Wu, X.N.1
Wang, X.K.2
Wu, S.Q.3
Lu, J.4
Zheng, M.5
Wang, Y.H.6
Zhou, H.7
Zhang, H.8
Han, J.9
-
28
-
-
79952281400
-
Inactivation of Rheb by PRAK-mediated phosphorylation is essential for energy-depletioninduced suppression of mTORC1
-
Zheng, M., Wang, Y. H., Wu, X. N., Wu, S. Q., Lu, B. J., Dong, M. Q., Zhang, H., Sun, P., Lin, S. C., Guan, K. L., and Han, J. (2011) Inactivation of Rheb by PRAK-mediated phosphorylation is essential for energy-depletioninduced suppression of mTORC1. Nat. Cell. Biol. 13, 263-272
-
(2011)
Nat. Cell. Biol.
, vol.13
, pp. 263-272
-
-
Zheng, M.1
Wang, Y.H.2
Wu, X.N.3
Wu, S.Q.4
Lu, B.J.5
Dong, M.Q.6
Zhang, H.7
Sun, P.8
Lin, S.C.9
Guan, K.L.10
Han, J.11
-
29
-
-
67349266694
-
Universal sample preparation method for proteome analysis
-
Wiśniewski, J. R., Zougman, A., Nagaraj, N., and Mann, M. (2009) Universal sample preparation method for proteome analysis. Nat. Methods 6, 359-362
-
(2009)
Nat. Methods
, vol.6
, pp. 359-362
-
-
Wiśniewski, J.R.1
Zougman, A.2
Nagaraj, N.3
Mann, M.4
-
30
-
-
77954375657
-
Optimized IMAC-IMAC protocol for phosphopeptide recovery from complex biological samples
-
Ye, J., Zhang, X., Young, C., Zhao, X., Hao, Q., Cheng, L., and Jensen, O. N. (2010) Optimized IMAC-IMAC protocol for phosphopeptide recovery from complex biological samples. J. Proteome Res. 9, 3561-3573
-
(2010)
J. Proteome Res.
, vol.9
, pp. 3561-3573
-
-
Ye, J.1
Zhang, X.2
Young, C.3
Zhao, X.4
Hao, Q.5
Cheng, L.6
Jensen, O.N.7
-
31
-
-
79959958529
-
Performance characteristics of a new hybrid quadrupole time-of-flight tandem mass spectrometer (TripleTOF 5600)
-
Andrews, G. L., Simons, B. L., Young, J. B., Hawkridge, A. M., and Muddiman, D. C. (2011) Performance characteristics of a new hybrid quadrupole time-of-flight tandem mass spectrometer (TripleTOF 5600). Anal. Chem. 83, 5442-5446
-
(2011)
Anal. Chem.
, vol.83
, pp. 5442-5446
-
-
Andrews, G.L.1
Simons, B.L.2
Young, J.B.3
Hawkridge, A.M.4
Muddiman, D.C.5
-
32
-
-
34848889259
-
The paragon algorithm, a next generation search engine that uses sequence temperature values sequence temperature values and feature probabilities to identify peptides from tandem mass spectra
-
DOI 10.1074/mcp.T600050-MCP200
-
Shilov, I. V., Seymour, S. L., Patel, A. A., Loboda, A., Tang, W. H., Keating, S. P., Hunter, C. L., Nuwaysir, L. M., and Schaeffer, D. A. (2007) The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra. Mol. Cell. Proteomics 6, 1638-1655 (Pubitemid 47506173)
-
(2007)
Molecular and Cellular Proteomics
, vol.6
, Issue.9
, pp. 1638-1655
-
-
Shilov, I.V.1
Seymourt, S.L.2
Patel, A.A.3
Loboda, A.4
Tang, W.H.5
Keating, S.P.6
Hunter, C.L.7
Nuwaysir, L.M.8
Schaeffer, D.A.9
-
33
-
-
33749853607
-
A probability-based approach for high-throughput protein phosphorylation analysis and site localization
-
DOI 10.1038/nbt1240, PII NBT1240
-
Beausoleil, S. A., Villén, J., Gerber, S. A., Rush, J., and Gygi, S. P. (2006) A probability-based approach for high-throughput protein phosphorylation analysis and site localization. Nat. Biotechnol. 24, 1285-1292 (Pubitemid 44564776)
-
(2006)
Nature Biotechnology
, vol.24
, Issue.10
, pp. 1285-1292
-
-
Beausoleil, S.A.1
Villen, J.2
Gerber, S.A.3
Rush, J.4
Gygi, S.P.5
-
34
-
-
0037108887
-
Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search
-
DOI 10.1021/ac025747h
-
Keller, A., Nesvizhskii, A. I., Kolker, E., and Aebersold, R. (2002) Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search. Anal. Chem. 74, 5383-5392 (Pubitemid 35215372)
-
(2002)
Analytical Chemistry
, vol.74
, Issue.20
, pp. 5383-5392
-
-
Keller, A.1
Nesvizhskii, A.I.2
Kolker, E.3
Aebersold, R.4
-
35
-
-
0042338362
-
A statistical model for identifying proteins by tandem mass spectrometry
-
DOI 10.1021/ac0341261
-
Nesvizhskii, A. I., Keller, A., Kolker, E., and Aebersold, R. (2003) A statistical model for identifying proteins by tandem mass spectrometry. Anal. Chem. 75, 4646-4658 (Pubitemid 37082259)
-
(2003)
Analytical Chemistry
, vol.75
, Issue.17
, pp. 4646-4658
-
-
Nesvizhskii, A.I.1
Keller, A.2
Kolker, E.3
Aebersold, R.4
-
36
-
-
27944499451
-
An iterative statistical approach to the identification of protein phosphorylation motifs from large-scale data sets
-
DOI 10.1038/nbt1146, PII N1146
-
Schwartz, D., and Gygi, S. P. (2005) An iterative statistical approach to the identification of protein phosphorylation motifs from large-scale data sets. Nat. Biotechnol. 23, 1391-1398 (Pubitemid 41679391)
-
(2005)
Nature Biotechnology
, vol.23
, Issue.11
, pp. 1391-1398
-
-
Schwartz, D.1
Gygi, S.P.2
-
37
-
-
58549112996
-
Bioinformatics enrichment tools: Paths toward the comprehensive functional analysis of large gene lists
-
Huang da, W., Sherman, B. T., and Lempicki, R. A. (2009) Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res. 37, 1-13
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 1-13
-
-
Huang Da, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
38
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
-
Huang da, W., Sherman, B. T., and Lempicki, R. A. (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc. 4, 44-57
-
(2009)
Nat. Protoc.
, vol.4
, pp. 44-57
-
-
Huang Da, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
39
-
-
77952226764
-
Super-SILAC mix for quantitative proteomics of human tumor tissue
-
Geiger, T., Cox, J., Ostasiewicz, P., Wisniewski, J. R., and Mann, M. (2010) Super-SILAC mix for quantitative proteomics of human tumor tissue. Nat. Methods 7, 383-385
-
(2010)
Nat. Methods
, vol.7
, pp. 383-385
-
-
Geiger, T.1
Cox, J.2
Ostasiewicz, P.3
Wisniewski, J.R.4
Mann, M.5
-
40
-
-
79551663189
-
Use of stable isotope labeling by amino acids in cell culture as a spike-in standard in quantitative proteomics
-
Geiger, T., Wisniewski, J. R., Cox, J., Zanivan, S., Kruger, M., Ishihama, Y., and Mann, M. (2011) Use of stable isotope labeling by amino acids in cell culture as a spike-in standard in quantitative proteomics. Nat. Protoc. 6, 147-157
-
(2011)
Nat. Protoc.
, vol.6
, pp. 147-157
-
-
Geiger, T.1
Wisniewski, J.R.2
Cox, J.3
Zanivan, S.4
Kruger, M.5
Ishihama, Y.6
Mann, M.7
-
41
-
-
84857047339
-
PhosphoSitePlus: A comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse
-
Hornbeck, P. V., Kornhauser, J. M., Tkachev, S., Zhang, B., Skrzypek, E., Murray, B., Latham, V., and Sullivan, M. (2012) PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse. Nucleic Acids Res. 40, D261-270
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Hornbeck, P.V.1
Kornhauser, J.M.2
Tkachev, S.3
Zhang, B.4
Skrzypek, E.5
Murray, B.6
Latham, V.7
Sullivan, M.8
-
42
-
-
78651320816
-
Phospho.ELM: A database of phosphorylation sites-update 2011
-
Dinkel, H., Chica, C., Via, A., Gould, C. M., Jensen, L. J., Gibson, T. J., and Diella, F. (2011) Phospho.ELM: a database of phosphorylation sites-update 2011. Nucleic Acids Res. 39, D261-267
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Dinkel, H.1
Chica, C.2
Via, A.3
Gould, C.M.4
Jensen, L.J.5
Gibson, T.J.6
Diella, F.7
-
43
-
-
33845329203
-
Functional and quantitative proteomics using SILAC
-
Mann, M. (2006) Functional and quantitative proteomics using SILAC. Nat. Rev. Mol. Cell Biol. 7, 952-958
-
(2006)
Nat. Rev. Mol. Cell Biol.
, vol.7
, pp. 952-958
-
-
Mann, M.1
-
44
-
-
84857938446
-
Comparative proteomic analysis of eleven common cell lines reveals ubiquitous but varying expression of most proteins
-
Geiger, T., Wehner, A., Schaab, C., Cox, J., and Mann, M. (2012) Comparative proteomic analysis of eleven common cell lines reveals ubiquitous but varying expression of most proteins. Mol. Cell. Proteomics. 11, M111.014050
-
(2012)
Mol. Cell. Proteomics.
, vol.11
-
-
Geiger, T.1
Wehner, A.2
Schaab, C.3
Cox, J.4
Mann, M.5
-
45
-
-
33947103658
-
A curated compendium of phosphorylation motifs
-
Amanchy, R., Periaswamy, B., Mathivanan, S., Reddy, R., Tattikota, S. G., and Pandey, A. (2007) A curated compendium of phosphorylation motifs. Nat. Biotechnol. 25, 285-286
-
(2007)
Nat. Biotechnol.
, vol.25
, pp. 285-286
-
-
Amanchy, R.1
Periaswamy, B.2
Mathivanan, S.3
Reddy, R.4
Tattikota, S.G.5
Pandey, A.6
-
46
-
-
0343177223
-
A structural basis for substrate specificities of protein Ser/Thr kinases: Primary sequence preference of casein kinases I and II, NIMA, phosphorylase kinase, calmodulin-dependent kinase II, CDK5, and Erk1
-
Songyang, Z., Lu, K. P., Kwon, Y. T., Tsai, L. H., Filhol, O., Cochet, C., Brickey, D. A., Soderling, T. R., Bartleson, C., Graves, D. J., DeMaggio, A. J., Hoekstra, M. F., Blenis, J., Hunter, T., and Cantley, L. C. (1996) A structural basis for substrate specificities of protein Ser/Thr kinases: primary sequence preference of casein kinases I and II, NIMA, phosphorylase kinase, calmodulin-dependent kinase II, CDK5, and Erk1. Mol. Cell. Biol. 16, 6486-6493 (Pubitemid 26361007)
-
(1996)
Molecular and Cellular Biology
, vol.16
, Issue.11
, pp. 6486-6493
-
-
Songyang, Z.1
Lu, K.P.2
Kwon, Y.T.3
Tsai, L.-H.4
Filhol, O.5
Cochet, C.6
Brickey, D.A.7
Soderling, T.R.8
Bartleson, C.9
Graves, D.J.10
Demaggio, A.J.11
Hoekstra, M.F.12
Blenis, J.13
Hunter, T.14
Cantley, L.C.15
-
47
-
-
0026321413
-
Multisite and hierarchal protein phosphorylation
-
Roach, P. J. (1991) Multisite and hierarchal protein phosphorylation. J. Biol. Chem. 266, 14139-14142
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 14139-14142
-
-
Roach, P.J.1
-
48
-
-
0042838373
-
A noncanonical sequence phosphorylated by casein kinase 1 in beta-catenin may play a role in casein kinase 1 targeting of important signaling proteins
-
Marin, O., Bustos, V. H., Cesaro, L., Meggio, F., Pagano, M. A., Antonelli, M., Allende, C. C., Pinna, L. A., and Allende, J. E. (2003) A noncanonical sequence phosphorylated by casein kinase 1 in beta-catenin may play a role in casein kinase 1 targeting of important signaling proteins. Proc. Natl. Acad. Sci. U.S.A. 100, 10193-10200
-
(2003)
Proc. Natl. Acad. Sci. U.S.A.
, vol.100
, pp. 10193-10200
-
-
Marin, O.1
Bustos, V.H.2
Cesaro, L.3
Meggio, F.4
Pagano, M.A.5
Antonelli, M.6
Allende, C.C.7
Pinna, L.A.8
Allende, J.E.9
-
49
-
-
0026355413
-
Protein kinase phosphorylation site sequences and consensus specificity motifs: Tabulations
-
Pearson, R. B., and Kemp, B. E. (1991) Protein kinase phosphorylation site sequences and consensus specificity motifs: tabulations. Methods Enzymol. 200, 62-81
-
(1991)
Methods Enzymol.
, vol.200
, pp. 62-81
-
-
Pearson, R.B.1
Kemp, B.E.2
-
50
-
-
80053954585
-
Regulation of sororin by Cdk1-mediated phosphorylation
-
Dreier, M. R., Bekier, M. E., 2nd, and Taylor, W. R. (2011) Regulation of sororin by Cdk1-mediated phosphorylation. J. Cell Sci. 124, 2976-2987
-
(2011)
J. Cell Sci.
, vol.124
, pp. 2976-2987
-
-
Dreier, M.R.1
Bekier II, M.E.2
Taylor, W.R.3
-
51
-
-
67651089806
-
Phosphorylation of Mcm2 by Cdc7 promotes pre-replication complex assembly during cell-cycle re-entry
-
Chuang, L. C., Teixeira, L. K., Wohlschlegel, J. A., Henze, M., Yates, J. R., Méndez, J., and Reed, S. I. (2009) Phosphorylation of Mcm2 by Cdc7 promotes pre-replication complex assembly during cell-cycle re-entry. Mol. Cell 35, 206-216
-
(2009)
Mol. Cell
, vol.35
, pp. 206-216
-
-
Chuang, L.C.1
Teixeira, L.K.2
Wohlschlegel, J.A.3
Henze, M.4
Yates, J.R.5
Méndez, J.6
Reed, S.I.7
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