-
1
-
-
74949143771
-
Inwardly rectifying potassium channels: Their structure, function, and physiological roles
-
H. Hibino, A. Inanobe, K. Furutani, S. Murakami, I. Findlay, and Y. Kurachi Inwardly rectifying potassium channels: their structure, function, and physiological roles Physiol. Rev. 90 2010 291 366
-
(2010)
Physiol. Rev.
, vol.90
, pp. 291-366
-
-
Hibino, H.1
Inanobe, A.2
Furutani, K.3
Murakami, S.4
Findlay, I.5
Kurachi, Y.6
-
3
-
-
29844450489
-
International union of pharmacology. LIV. Nomenclature and molecular relationships of inwardly rectifying potassium channels
-
Y. Kubo, J.P. Adelman, D.E. Clapham, L.Y. Jan, A. Karschin, Y. Kurachi, M. Lazdunski, C.G. Nichols, S. Seino, and C.A. Vandenberg International union of pharmacology. LIV. Nomenclature and molecular relationships of inwardly rectifying potassium channels Pharmacol. Rev. 57 2005 509 526
-
(2005)
Pharmacol. Rev.
, vol.57
, pp. 509-526
-
-
Kubo, Y.1
Adelman, J.P.2
Clapham, D.E.3
Jan, L.Y.4
Karschin, A.5
Kurachi, Y.6
Lazdunski, M.7
Nichols, C.G.8
Seino, S.9
Vandenberg, C.A.10
-
4
-
-
84859519233
-
Targeting GIRK channels for the development of new therapeutic agents
-
K.B. Walsh Targeting GIRK channels for the development of new therapeutic agents Front. Pharmacol. 2 2011 1 8
-
(2011)
Front. Pharmacol.
, vol.2
, pp. 1-8
-
-
Walsh, K.B.1
-
5
-
-
0037293068
-
Kir channels in the CNS: Emerging new roles and implications for neurological diseases
-
C. Neusch, J.H. Weishaupt, and M. Bähr Kir channels in the CNS: emerging new roles and implications for neurological diseases Cell Tissue Res. 311 2003 131 138
-
(2003)
Cell Tissue Res.
, vol.311
, pp. 131-138
-
-
Neusch, C.1
Weishaupt, J.H.2
Bähr, M.3
-
6
-
-
77951498231
-
Emerging roles for G protein-gated inwardly rectifying potassium (GIRK) channels in health and disease
-
C. Lüscher, and P.A. Slesinger Emerging roles for G protein-gated inwardly rectifying potassium (GIRK) channels in health and disease Nat. Rev. Neurosci. 11 2010 301 315
-
(2010)
Nat. Rev. Neurosci.
, vol.11
, pp. 301-315
-
-
Lüscher, C.1
Slesinger, P.A.2
-
8
-
-
73049109262
-
Cardiac strong inward rectifier potassium channels
-
J.M.B. Anumonwo, and A.N. Lopatin Cardiac strong inward rectifier potassium channels J. Mol. Cell. Cardiol. 48 2010 45 54
-
(2010)
J. Mol. Cell. Cardiol.
, vol.48
, pp. 45-54
-
-
Anumonwo, J.M.B.1
Lopatin, A.N.2
-
10
-
-
0037184996
-
Structural basis of inward rectification: Cytoplasmic pore of the G protein-gated inward rectifier GIRK1 at 1.8 Å resolution
-
M. Nishida, and R. MacKinnon Structural basis of inward rectification: cytoplasmic pore of the G protein-gated inward rectifier GIRK1 at 1.8 Å resolution Cell 111 2002 957 965
-
(2002)
Cell
, vol.111
, pp. 957-965
-
-
Nishida, M.1
MacKinnon, R.2
-
11
-
-
12444274301
-
Crystal structure of the potassium channel KirBac1.1 in the closed state
-
A. Kuo, J.M. Gulbis, J.F. Antcliff, T. Rahman, E.D. Lowe, J. Zimmer, J. Cuthbertson, F.M. Ashcroft, T. Ezaki, and D.A. Doyle Crystal structure of the potassium channel KirBac1.1 in the closed state Science 300 2003 1922 1926
-
(2003)
Science
, vol.300
, pp. 1922-1926
-
-
Kuo, A.1
Gulbis, J.M.2
Antcliff, J.F.3
Rahman, T.4
Lowe, E.D.5
Zimmer, J.6
Cuthbertson, J.7
Ashcroft, F.M.8
Ezaki, T.9
Doyle, D.A.10
-
13
-
-
0035049090
-
Yeast screen for constitutively active mutant G protein-activated potassium channels
-
B.A. Yi, Y.F. Lin, Y.N. Jan, and L.Y. Jan Yeast screen for constitutively active mutant G protein-activated potassium channels Neuron 29 2001 657 667
-
(2001)
Neuron
, vol.29
, pp. 657-667
-
-
Yi, B.A.1
Lin, Y.F.2
Jan, Y.N.3
Jan, L.Y.4
-
16
-
-
33947709389
-
Molecular dynamics simulations of inwardly rectifying (Kir) potassium channels: A comparative study
-
S. Haider, S. Khalid, S.J. Tucker, F.M. Ashcroft, and M.S.P. Sansom Molecular dynamics simulations of inwardly rectifying (Kir) potassium channels: a comparative study Biochemistry 46 2007 3643 3652
-
(2007)
Biochemistry
, vol.46
, pp. 3643-3652
-
-
Haider, S.1
Khalid, S.2
Tucker, S.J.3
Ashcroft, F.M.4
Sansom, M.S.P.5
-
17
-
-
0034123344
-
Homology modeling and molecular dynamics simulation studies of an inward rectifier potassium channel
-
C.E. Capener, I.H. Shrivastava, K.M. Ranatunga, L.R. Forrest, G.R. Smith, and M.S.P. Sansom Homology modeling and molecular dynamics simulation studies of an inward rectifier potassium channel Biophys. J. 78 2000 2929 2942
-
(2000)
Biophys. J.
, vol.78
, pp. 2929-2942
-
-
Capener, C.E.1
Shrivastava, I.H.2
Ranatunga, K.M.3
Forrest, L.R.4
Smith, G.R.5
Sansom, M.S.P.6
-
18
-
-
0036151669
-
Conducting-state properties of the KcsA potassium channels from molecular and Brownian dynamics simulations
-
S.H. Chung, T.W. Allen, and S. Kuyucak Conducting-state properties of the KcsA potassium channels from molecular and Brownian dynamics simulations Biophys. J. 82 2002 628 645
-
(2002)
Biophys. J.
, vol.82
, pp. 628-645
-
-
Chung, S.H.1
Allen, T.W.2
Kuyucak, S.3
-
19
-
-
0032750783
-
Molecular dynamics study of the KcsA potassium channel
-
T.W. Allen, S. Kuyucak, and S.H. Chung Molecular dynamics study of the KcsA potassium channel Biophys. J. 77 1999 2502 2516
-
(1999)
Biophys. J.
, vol.77
, pp. 2502-2516
-
-
Allen, T.W.1
Kuyucak, S.2
Chung, S.H.3
-
22
-
-
27344436659
-
Scalable molecular dynamics with NAMD
-
J.C. Phillips, R. Braun, W. Wang, J. Gumbart, E. Tajkhorshid, E. Villa, C. Chipot, R.D. Skeel, L. Kale, and K. Schulten Scalable molecular dynamics with NAMD J. Comput. Chem. 26 2005 1781 1802
-
(2005)
J. Comput. Chem.
, vol.26
, pp. 1781-1802
-
-
Phillips, J.C.1
Braun, R.2
Wang, W.3
Gumbart, J.4
Tajkhorshid, E.5
Villa, E.6
Chipot, C.7
Skeel, R.D.8
Kale, L.9
Schulten, K.10
-
23
-
-
82955193902
-
Permeation and block of the Kv1.2 channel examined using Brownian and molecular dynamics
-
D. Gordon, and S.H. Chung Permeation and block of the Kv1.2 channel examined using Brownian and molecular dynamics Biophys. J. 101 2011 2671 2678
-
(2011)
Biophys. J.
, vol.101
, pp. 2671-2678
-
-
Gordon, D.1
Chung, S.H.2
-
26
-
-
0037093650
-
Simulations of ion current in realistic models of ion channels: The KcsA potassium channel
-
A. Burykin, C.N. Schutz, J. Villá, and A. Warshel Simulations of ion current in realistic models of ion channels: the KcsA potassium channel Proteins 47 2002 265 280
-
(2002)
Proteins
, vol.47
, pp. 265-280
-
-
Burykin, A.1
Schutz, C.N.2
Villá, J.3
Warshel, A.4
-
27
-
-
84858130853
-
First-principles prediction of acidities in the gas and solution phase
-
J. Ho, and M.L. Coote First-principles prediction of acidities in the gas and solution phase WIREs Comput. Mol. Sci. 1 2011 649 660
-
(2011)
WIREs Comput. Mol. Sci.
, vol.1
, pp. 649-660
-
-
Ho, J.1
Coote, M.L.2
-
28
-
-
62149122220
-
Progress in ab initio QM/MM free-energy simulations of electrostatic energies in proteins: Accelerated QM/MM studies of pKa, redox reactions and salvation free energies
-
S.C.L. Kamerlin, M. Haranczyk, and A. Warshel Progress in ab initio QM/MM free-energy simulations of electrostatic energies in proteins: accelerated QM/MM studies of pKa, redox reactions and salvation free energies J. Phys. Chem. B 113 2009 1253 1272
-
(2009)
J. Phys. Chem. B
, vol.113
, pp. 1253-1272
-
-
Kamerlin, S.C.L.1
Haranczyk, M.2
Warshel, A.3
-
30
-
-
3142714765
-
Extending the treatment of backbone energetics in protein force fields: Limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulations
-
A.D. MacKerell Jr., M. Feig, and C.L. Brooks III Extending the treatment of backbone energetics in protein force fields: limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulations J. Comput. Chem. 25 2004 1400 1415
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1400-1415
-
-
MacKerell, Jr.A.D.1
Feig, M.2
Brooks Iii, C.L.3
-
31
-
-
0041784950
-
All-atom empirical potential for molecular modeling and dynamic studies of proteins
-
A.D. MacKerell Jr., D. Bashford, M. Bellott, R.L. Dunbrack Jr., J.D. Evanseck, M.J. Field, S. Fischer, J. Gao, H. Guo, S. Ha, D. Joseph-McCarthy, L. Kuchnir, K. Kuczera, F.T.K. Lau, C. Mattos, S. Michnick, T. Ngo, D.T. Nguyen, B. Prodhom, W.E. Reiher III, B. Roux, M. Schlenkrich, J.C. Smith, R. Stote, J. Straub, M. Watanabe, J. Wiorkiewicz-Kuczera, D. Yin, and M. Karplus All-atom empirical potential for molecular modeling and dynamic studies of proteins J. Phys. Chem. B 102 1998 3586 3616
-
(1998)
J. Phys. Chem. B
, vol.102
, pp. 3586-3616
-
-
MacKerell, Jr.A.D.1
Bashford, D.2
Bellott, M.3
Dunbrack, Jr.R.L.4
Evanseck, J.D.5
Field, M.J.6
Fischer, S.7
Gao, J.8
Guo, H.9
Ha, S.10
Joseph-Mccarthy, D.11
Kuchnir, L.12
Kuczera, K.13
Lau, F.T.K.14
Mattos, C.15
Michnick, S.16
Ngo, T.17
Nguyen, D.T.18
Prodhom, B.19
Reiher Iii, W.E.20
Roux, B.21
Schlenkrich, M.22
Smith, J.C.23
Stote, R.24
Straub, J.25
Watanabe, M.26
Wiorkiewicz-Kuczera, J.27
Yin, D.28
Karplus, M.29
more..
-
32
-
-
82955194460
-
Modeling the binding of three toxins to the voltage-gated potassium channel (Kv1.3)
-
R. Chen, A. Robinson, D. Gordon, and S.H. Chung Modeling the binding of three toxins to the voltage-gated potassium channel (Kv1.3) Biophys. J. 101 2011 2652 2660
-
(2011)
Biophys. J.
, vol.101
, pp. 2652-2660
-
-
Chen, R.1
Robinson, A.2
Gordon, D.3
Chung, S.H.4
-
33
-
-
0027369797
-
Solution structure of tertiapin determined using nuclear magnetic resonance and distance geometry
-
X. Xu, and J.W. Nelson Solution structure of tertiapin determined using nuclear magnetic resonance and distance geometry Proteins 17 1993 124 137
-
(1993)
Proteins
, vol.17
, pp. 124-137
-
-
Xu, X.1
Nelson, J.W.2
-
34
-
-
35449008122
-
Integrating statistical pair potentials into protein complex prediction
-
J. Mintseris, B. Pierce, K. Wiehe, R. Anderson, R. Chen, and Z. Weng Integrating statistical pair potentials into protein complex prediction Proteins 69 2007 511 520
-
(2007)
Proteins
, vol.69
, pp. 511-520
-
-
Mintseris, J.1
Pierce, B.2
Wiehe, K.3
Anderson, R.4
Chen, R.5
Weng, Z.6
-
35
-
-
84986497803
-
Multidimensional free-energy calculations using the weighted histogram analysis method
-
S. Kumar, J.M. Rosenberg, D. Bouzida, R.H. Swendsen, and P.A. Kollman Multidimensional free-energy calculations using the weighted histogram analysis method J. Comput. Chem. 16 1995 1339 1350
-
(1995)
J. Comput. Chem.
, vol.16
, pp. 1339-1350
-
-
Kumar, S.1
Rosenberg, J.M.2
Bouzida, D.3
Swendsen, R.H.4
Kollman, P.A.5
-
37
-
-
67649386435
-
Mechanism and energetic of charybdotoxin unbinding from a potassium channel from molecular dynamics simulations
-
P.C. Chen, and S. Kuyucak Mechanism and energetic of charybdotoxin unbinding from a potassium channel from molecular dynamics simulations Biophys. J. 96 2009 2577 2588
-
(2009)
Biophys. J.
, vol.96
, pp. 2577-2588
-
-
Chen, P.C.1
Kuyucak, S.2
-
39
-
-
84860307772
-
Affinity and selectivity of ShK toxin for the Kv1 potassium channels from free energy simulations
-
M.H. Rashid, and S. Kuyucak Affinity and selectivity of ShK toxin for the Kv1 potassium channels from free energy simulations J. Phys. Chem. B 116 2012 4812 4822
-
(2012)
J. Phys. Chem. B
, vol.116
, pp. 4812-4822
-
-
Rashid, M.H.1
Kuyucak, S.2
-
42
-
-
77950544751
-
+ channels
-
+ channels Proc. Natl. Acad. Sci. U. S. A. 107 2010 5833 5838
-
(2010)
Proc. Natl. Acad. Sci. U. S. A.
, vol.107
, pp. 5833-5838
-
-
Jensen, M.O.1
Borhani, D.W.2
Lindorff-Larsen, K.3
Maragakis, P.4
Jogini, V.5
Eastwood, M.P.6
Dror, R.O.7
Shaw, D.E.8
-
43
-
-
33646187879
-
An energy-efficient gating mechanism in the acetylcholine receptor channel suggested by molecular and Brownian dynamics
-
B. Corry An energy-efficient gating mechanism in the acetylcholine receptor channel suggested by molecular and Brownian dynamics Biophys. J. 90 2006 799 810
-
(2006)
Biophys. J.
, vol.90
, pp. 799-810
-
-
Corry, B.1
-
45
-
-
34447256789
-
Conduction properties of KcsA measured using Brownian dynamics with flexible carbonyl groups in the selectivity filter
-
S.H. Chung, and B. Corry Conduction properties of KcsA measured using Brownian dynamics with flexible carbonyl groups in the selectivity filter Biophys. J. 93 2007 44 53
-
(2007)
Biophys. J.
, vol.93
, pp. 44-53
-
-
Chung, S.H.1
Corry, B.2
-
47
-
-
0036286651
-
Modeling diverse range of potassium channels with Brownian dynamics
-
S.H. Chung, T.W. Allen, and S. Kuyucak Modeling diverse range of potassium channels with Brownian dynamics Biophys. J. 83 2002 263 277
-
(2002)
Biophys. J.
, vol.83
, pp. 263-277
-
-
Chung, S.H.1
Allen, T.W.2
Kuyucak, S.3
-
49
-
-
1642525904
-
Influence of artificial periodicity and ionic strength in molecular dynamics simulations of charged biomolecules employing lattice-sum methods
-
M.A. Kastenholz, and P.H. Hünenberger Influence of artificial periodicity and ionic strength in molecular dynamics simulations of charged biomolecules employing lattice-sum methods J. Phys. Chem. B 108 2004 774 788
-
(2004)
J. Phys. Chem. B
, vol.108
, pp. 774-788
-
-
Kastenholz, M.A.1
Hünenberger, P.H.2
-
52
-
-
0042171841
-
Exploring the origin of the selectivity of the KcsA potassium channel
-
A. Burykin, M. Kato, and A. Warshel Exploring the origin of the selectivity of the KcsA potassium channel Proteins 52 2003 412 426
-
(2003)
Proteins
, vol.52
, pp. 412-426
-
-
Burykin, A.1
Kato, M.2
Warshel, A.3
-
53
-
-
0035451052
-
What are the dielectric "constants" of proteins and how to validate electrostatic models?
-
C.N. Schutz, and A. Warshel What are the dielectric "constants" of proteins and how to validate electrostatic models? Proteins 44 2001 400 417
-
(2001)
Proteins
, vol.44
, pp. 400-417
-
-
Schutz, C.N.1
Warshel, A.2
|