-
1
-
-
46349091971
-
The social network of a cell: recent advances in interactome mapping
-
Charbonnier, S., Gallego, O., Gavin, A. C., The social network of a cell: recent advances in interactome mapping. Biotechnol. Annu. Rev. 2008, 14, 1-28.
-
(2008)
Biotechnol. Annu. Rev.
, vol.14
, pp. 1-28
-
-
Charbonnier, S.1
Gallego, O.2
Gavin, A.C.3
-
2
-
-
77955966732
-
Protein-protein interactions
-
Williamson, M. P., Sutcliffe, M. J., Protein-protein interactions. Biochem. Soc. Trans. 2010, 38, 875-878.
-
(2010)
Biochem. Soc. Trans.
, vol.38
, pp. 875-878
-
-
Williamson, M.P.1
Sutcliffe, M.J.2
-
3
-
-
79959896639
-
Building protein-protein interaction networks with proteomics and informatics tools
-
Sardiu, M. E., Washburn, M. P., Building protein-protein interaction networks with proteomics and informatics tools. J. Biol. Chem. 2011, 286, 23645-23651.
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 23645-23651
-
-
Sardiu, M.E.1
Washburn, M.P.2
-
4
-
-
79958767028
-
Systematic characterization of protein-DNA interactions
-
Xie, Z., Hu, S., Qian, J., Blackshaw, S., Zhu, H., Systematic characterization of protein-DNA interactions. Cell Mol. Life Sci. 2011, 68, 1657-1668.
-
(2011)
Cell Mol. Life Sci.
, vol.68
, pp. 1657-1668
-
-
Xie, Z.1
Hu, S.2
Qian, J.3
Blackshaw, S.4
Zhu, H.5
-
5
-
-
34047191812
-
Protein binding microarrays for the characterization of DNA-protein interactions
-
Bulyk, M. L., Protein binding microarrays for the characterization of DNA-protein interactions. Adv. Biochem. Eng. Biotechnol. 2007, 104, 65-85.
-
(2007)
Adv. Biochem. Eng. Biotechnol.
, vol.104
, pp. 65-85
-
-
Bulyk, M.L.1
-
6
-
-
33746864004
-
ChIP-chip comes of age for genome-wide functional analysis
-
Wu, J., Smith, L. T., Plass, C., Huang, T. H., ChIP-chip comes of age for genome-wide functional analysis. Cancer Res. 2006, 66, 6899-6902.
-
(2006)
Cancer Res.
, vol.66
, pp. 6899-6902
-
-
Wu, J.1
Smith, L.T.2
Plass, C.3
Huang, T.H.4
-
7
-
-
34250159524
-
Genome-wide mapping of in vivo protein-DNA interactions
-
Johnson, D. S., Mortazavi, A., Myers, R. M., Wold, B., Genome-wide mapping of in vivo protein-DNA interactions. Science 2007, 316, 1497-1502.
-
(2007)
Science
, vol.316
, pp. 1497-1502
-
-
Johnson, D.S.1
Mortazavi, A.2
Myers, R.M.3
Wold, B.4
-
8
-
-
34547630151
-
ChIP-seq: welcome to the new frontier
-
Mardis, E. R., ChIP-seq: welcome to the new frontier. Nat. Methods 2007, 4, 613-614.
-
(2007)
Nat. Methods
, vol.4
, pp. 613-614
-
-
Mardis, E.R.1
-
9
-
-
78649980497
-
Lipidomics: new tools and applications
-
Wenk, M. R., Lipidomics: new tools and applications. Cell 2010, 143, 888-895.
-
(2010)
Cell
, vol.143
, pp. 888-895
-
-
Wenk, M.R.1
-
10
-
-
57549085173
-
Characterizing protein-protein interactions by sedimentation velocity analytical ultracentrifugation
-
Chapter 18, Unit 18.15.1--18.15.39
-
Brown, P. H., Balbo, A., Schuck, P., Characterizing protein-protein interactions by sedimentation velocity analytical ultracentrifugation. Curr. Protoc. Immunol. 2008, Chapter 18, Unit 18.15.1--18.15.39
-
(2008)
Curr. Protoc. Immunol.
-
-
Brown, P.H.1
Balbo, A.2
Schuck, P.3
-
11
-
-
0035135419
-
Simultaneous binding of PtdIns(4,5)P2 and clathrin by AP180 in the nucleation of clathrin lattices on membranes
-
Ford, M. G., Pearse, B. M., Higgins, M. K., Vallis, Y. et al., Simultaneous binding of PtdIns(4, 5)P2 and clathrin by AP180 in the nucleation of clathrin lattices on membranes. Science 2001, 291, 1051-1055.
-
(2001)
Science
, vol.291
, pp. 1051-1055
-
-
Ford, M.G.1
Pearse, B.M.2
Higgins, M.K.3
Vallis, Y.4
-
12
-
-
40549088246
-
Dimerization of the transmembrane domain of amyloid precursor proteins and familial Alzheimer's disease mutants
-
Gorman, P. M., Kim, S., Guo, M., Melnyk, R. A. et al., Dimerization of the transmembrane domain of amyloid precursor proteins and familial Alzheimer's disease mutants. BMC Neurosci. 2008, 9, 17.
-
(2008)
BMC Neurosci.
, vol.9
, pp. 17
-
-
Gorman, P.M.1
Kim, S.2
Guo, M.3
Melnyk, R.A.4
-
13
-
-
30944435279
-
Coordination between the actin cytoskeleton and membrane deformation by a novel membrane tubulation domain of PCH proteins is involved in endocytosis
-
Tsujita, K., Suetsugu, S., Sasaki, N., Furutani, M. et al., Coordination between the actin cytoskeleton and membrane deformation by a novel membrane tubulation domain of PCH proteins is involved in endocytosis. J. Cell Biol. 2006, 172, 269-279.
-
(2006)
J. Cell Biol.
, vol.172
, pp. 269-279
-
-
Tsujita, K.1
Suetsugu, S.2
Sasaki, N.3
Furutani, M.4
-
14
-
-
12744274775
-
Phosphatidylinositol 3,4,5-trisphosphate and Ca2+/calmodulin competitively bind to the regulators of G-protein-signalling (RGS) domain of RGS4 and reciprocally regulate its action
-
Ishii, M., Fujita, S., Yamada, M., Hosaka, Y., Kurachi, Y., Phosphatidylinositol 3, 4, 5-trisphosphate and Ca2+/calmodulin competitively bind to the regulators of G-protein-signalling (RGS) domain of RGS4 and reciprocally regulate its action. Biochem. J. 2005, 385, 65-73.
-
(2005)
Biochem. J.
, vol.385
, pp. 65-73
-
-
Ishii, M.1
Fujita, S.2
Yamada, M.3
Hosaka, Y.4
Kurachi, Y.5
-
15
-
-
0037200122
-
The intermolecular interaction between the PH domain and the C-terminal domain of Arabidopsis dynamin-like 6 determines lipid binding specificity
-
Lee, S. H., Jin, J. B., Song, J., Min, M. K. et al., The intermolecular interaction between the PH domain and the C-terminal domain of Arabidopsis dynamin-like 6 determines lipid binding specificity. J. Biol. Chem. 2002, 277, 31842-31849.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 31842-31849
-
-
Lee, S.H.1
Jin, J.B.2
Song, J.3
Min, M.K.4
-
16
-
-
18144420374
-
Biochemical characterization of rous sarcoma virus MA protein interaction with membranes
-
Dalton, A. K., Murray, P. S., Murray, D., Vogt, V. M., Biochemical characterization of rous sarcoma virus MA protein interaction with membranes. J. Virol. 2005, 79, 6227-6238.
-
(2005)
J. Virol.
, vol.79
, pp. 6227-6238
-
-
Dalton, A.K.1
Murray, P.S.2
Murray, D.3
Vogt, V.M.4
-
17
-
-
77949894585
-
Proteome of acidic phospholipid-binding proteins: spatial and temporal regulation of Coronin 1A by phosphoinositides
-
Tsujita, K., Itoh, T., Kondo, A., Oyama, M. et al., Proteome of acidic phospholipid-binding proteins: spatial and temporal regulation of Coronin 1A by phosphoinositides. J. Biol. Chem. 2010, 285, 6781-6789.
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 6781-6789
-
-
Tsujita, K.1
Itoh, T.2
Kondo, A.3
Oyama, M.4
-
18
-
-
0023260890
-
Radioiodinated, photoactivatable phosphatidylcholine and phosphatidylserine: transfer properties and differential photoreactive interaction with human erythrocyte membrane proteins
-
Schroit, A. J., Madsen, J., Ruoho, A. E., Radioiodinated, photoactivatable phosphatidylcholine and phosphatidylserine: transfer properties and differential photoreactive interaction with human erythrocyte membrane proteins. Biochemistry 1987, 26, 1812-1819.
-
(1987)
Biochemistry
, vol.26
, pp. 1812-1819
-
-
Schroit, A.J.1
Madsen, J.2
Ruoho, A.E.3
-
19
-
-
0024506755
-
Electrostatic and hydrophobic interactions of synapsin I and synapsin I fragments with phospholipid bilayers
-
Benfenati, F., Greengard, P., Brunner, J., Bähler, M., Electrostatic and hydrophobic interactions of synapsin I and synapsin I fragments with phospholipid bilayers. J. Cell Biol. 1989, 108, 1851-1862.
-
(1989)
J. Cell Biol.
, vol.108
, pp. 1851-1862
-
-
Benfenati, F.1
Greengard, P.2
Brunner, J.3
Bähler, M.4
-
20
-
-
70349440924
-
Protein-lipid interactions: paparazzi hunting for snap-shots
-
Haberkant, P., van Meer, G., Protein-lipid interactions: paparazzi hunting for snap-shots. Biol. Chem. 2009, 390, 795-803.
-
(2009)
Biol. Chem.
, vol.390
, pp. 795-803
-
-
Haberkant, P.1
van Meer, G.2
-
21
-
-
77956516299
-
Proteome-wide detection of phospholipid-protein interactions in mitochondria by photo cross-linking and click chemistry
-
Gubbens, J., de Kroon, A. I., Proteome-wide detection of phospholipid-protein interactions in mitochondria by photo cross-linking and click chemistry. Mol. Biosyst. 2010, 6, 1751-1759.
-
(2010)
Mol. Biosyst.
, vol.6
, pp. 1751-1759
-
-
Gubbens, J.1
de Kroon, A.I.2
-
22
-
-
0024356301
-
Rapid measurement of binding constants and heats of binding using a new titration calorimeter
-
Wiseman, T., Williston, S., Brandts, J. F., Lin, L. N., Rapid measurement of binding constants and heats of binding using a new titration calorimeter. Anal. Biochem. 1989, 179, 131-137.
-
(1989)
Anal. Biochem.
, vol.179
, pp. 131-137
-
-
Wiseman, T.1
Williston, S.2
Brandts, J.F.3
Lin, L.N.4
-
23
-
-
59249086201
-
Cytoplasmic residues of phospholamban interact with membrane surfaces in the presence of SERCA: a new role for phospholipids in the regulation of cardiac calcium cycling?
-
Hughes, E., Clayton, J. C., Middleton, D. A., Cytoplasmic residues of phospholamban interact with membrane surfaces in the presence of SERCA: a new role for phospholipids in the regulation of cardiac calcium cycling? Biochim. Biophys. Acta. 2009, 1788, 559-566.
-
(2009)
Biochim. Biophys. Acta.
, vol.1788
, pp. 559-566
-
-
Hughes, E.1
Clayton, J.C.2
Middleton, D.A.3
-
24
-
-
84859883013
-
Binding of cationic pentapeptides with modified side chain lengths to negatively charged lipid membranes: complex interplay of electrostatic and hydrophobic interactions
-
Hoernke, M., Schwieger, C., Kerth, A., Blume, A., Binding of cationic pentapeptides with modified side chain lengths to negatively charged lipid membranes: complex interplay of electrostatic and hydrophobic interactions. Biochim. Biophys. Acta. 2012, 1818, 1663-1672.
-
(2012)
Biochim. Biophys. Acta.
, vol.1818
, pp. 1663-1672
-
-
Hoernke, M.1
Schwieger, C.2
Kerth, A.3
Blume, A.4
-
25
-
-
84857969148
-
Structural determinants of the specificity of a membrane binding domain of the scaffold protein Ste5 of budding yeast: implications in signaling by the scaffold protein in MAPK pathway
-
Bhunia, A., Mohanram, H., Bhattacharjya, S., Structural determinants of the specificity of a membrane binding domain of the scaffold protein Ste5 of budding yeast: implications in signaling by the scaffold protein in MAPK pathway. Biochim. Biophys. Acta 2012, 1818, 1250-1260.
-
(2012)
Biochim. Biophys. Acta
, vol.1818
, pp. 1250-1260
-
-
Bhunia, A.1
Mohanram, H.2
Bhattacharjya, S.3
-
26
-
-
78649776010
-
The intrinsically disordered late embryogenesis abundant protein LEA18 from Arabidopsis thaliana modulates membrane stability through binding and folding
-
Hundertmark, M., Dimova, R., Lengefeld, J., Seckler, R., Hincha, D. K., The intrinsically disordered late embryogenesis abundant protein LEA18 from Arabidopsis thaliana modulates membrane stability through binding and folding. Biochim. Biophys. Acta 2011, 1808, 446-453.
-
(2011)
Biochim. Biophys. Acta
, vol.1808
, pp. 446-453
-
-
Hundertmark, M.1
Dimova, R.2
Lengefeld, J.3
Seckler, R.4
Hincha, D.K.5
-
27
-
-
0344589334
-
Structure, dynamics and composition of the lipid-protein interface. Perspectives from spin-labelling
-
Marsh, D., Horváth, L. I., Structure, dynamics and composition of the lipid-protein interface. Perspectives from spin-labelling. Biochim. Biophys. Acta 1998, 1376, 267- 296.
-
(1998)
Biochim. Biophys. Acta
, vol.1376
, pp. 267-296
-
-
Marsh, D.1
Horváth, L.I.2
-
28
-
-
77952089695
-
Electron spin resonance in membrane research: protein-lipid interactions from challenging beginnings to state of the art
-
Marsh, D., Electron spin resonance in membrane research: protein-lipid interactions from challenging beginnings to state of the art. Eur. Biophys. J. 2010, 39, 513-525.
-
(2010)
Eur. Biophys. J.
, vol.39
, pp. 513-525
-
-
Marsh, D.1
-
29
-
-
80054769975
-
Enforcing the positive charge of N-termini enhances membrane interaction and antitumor activity of bovine seminal ribonuclease
-
D'Errico, G., Ercole, C., Lista, M., Pizzo, E. et al., Enforcing the positive charge of N-termini enhances membrane interaction and antitumor activity of bovine seminal ribonuclease. Biochim. Biophys. Acta 2011, 1808, 3007-3015.
-
(2011)
Biochim. Biophys. Acta
, vol.1808
, pp. 3007-3015
-
-
D'Errico, G.1
Ercole, C.2
Lista, M.3
Pizzo, E.4
-
30
-
-
74749108240
-
Interaction of a beta-sheet breaker peptide with lipid membranes
-
Vitiello, G., Grimaldi, M., Ramunno, A., Ortona, O. et al., Interaction of a beta-sheet breaker peptide with lipid membranes. J. Pept. Sci. 2010, 16, 115-122.
-
(2010)
J. Pept. Sci.
, vol.16
, pp. 115-122
-
-
Vitiello, G.1
Grimaldi, M.2
Ramunno, A.3
Ortona, O.4
-
31
-
-
84871293616
-
-
Eds), Springer, New York .
-
Mateo, C. R., Gómez, J., Villalaín, J., Gonzaláz Ros, J. M. (Eds) Protein-lipid interactions, Springer, New York 2005, pp. 1--33.
-
(2005)
Protein-lipid interactions
, pp. 1-33
-
-
Mateo, C.R.1
Gómez, J.2
Villalaín, J.3
Gonzaláz Ros, J.M.4
-
32
-
-
0029661973
-
Phospholipase C beta2 association with phospholipid interfaces assessed by fluorescence resonance energy transfer. G protein betagamma subunit-mediated translocation is not required for enzyme activation
-
Romoser, V., Ball, R., Smrcka, A. V., Phospholipase C beta2 association with phospholipid interfaces assessed by fluorescence resonance energy transfer. G protein betagamma subunit-mediated translocation is not required for enzyme activation. J. Biol. Chem. 1996, 271, 25071-25078.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 25071-25078
-
-
Romoser, V.1
Ball, R.2
Smrcka, A.V.3
-
33
-
-
34447521411
-
Binding of phosphoinositide-specific phospholipase C-zeta (PLC-zeta) to phospholipid membranes: potential role of an unstructured cluster of basic residues
-
Nomikos, M., Mulgrew-Nesbitt, A., Pallavi, P., Mihalyne, G. et al., Binding of phosphoinositide-specific phospholipase C-zeta (PLC-zeta) to phospholipid membranes: potential role of an unstructured cluster of basic residues. J. Biol. Chem. 2007, 282, 16644-16653.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 16644-16653
-
-
Nomikos, M.1
Mulgrew-Nesbitt, A.2
Pallavi, P.3
Mihalyne, G.4
-
34
-
-
70350025513
-
The Ca2+ affinity of synaptotagmin 1 is markedly increased by a specific interaction of its C2B domain with phosphatidylinositol 4,5-bisphosphate
-
Radhakrishnan, A., Stein, A., Jahn, R., Fasshauer, D., The Ca2+ affinity of synaptotagmin 1 is markedly increased by a specific interaction of its C2B domain with phosphatidylinositol 4, 5-bisphosphate. J. Biol. Chem. 2009, 284, 25749-25760.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 25749-25760
-
-
Radhakrishnan, A.1
Stein, A.2
Jahn, R.3
Fasshauer, D.4
-
35
-
-
0025174175
-
Binding of human factor VIII to phospholipid vesicles
-
Gilbert, G. E., Furie, B. C., Furie, B., Binding of human factor VIII to phospholipid vesicles. J. Biol. Chem. 1990, 265, 815-822.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 815-822
-
-
Gilbert, G.E.1
Furie, B.C.2
Furie, B.3
-
36
-
-
0027732495
-
Quantitation of the interaction of protein kinase C with diacylglycerol and phosphoinositides by time-resolved detection of resonance energy transfer
-
Pap, E. H., Bastiaens, P. I., Borst, J. W., van den Berg, P. A. et al., Quantitation of the interaction of protein kinase C with diacylglycerol and phosphoinositides by time-resolved detection of resonance energy transfer. Biochemistry 1993, 32, 13310-13317.
-
(1993)
Biochemistry
, vol.32
, pp. 13310-13317
-
-
Pap, E.H.1
Bastiaens, P.I.2
Borst, J.W.3
van den Berg, P.A.4
-
37
-
-
0035813102
-
Steroidogenic acute regulatory protein binds cholesterol and modulates mitochondrial membrane sterol domain dynamics
-
Petrescu, A. D., Gallegos, A. M., Okamura, Y., Strauss, J. F., Schroeder, F., Steroidogenic acute regulatory protein binds cholesterol and modulates mitochondrial membrane sterol domain dynamics. J. Biol. Chem. 2001, 276, 36970-36982.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 36970-36982
-
-
Petrescu, A.D.1
Gallegos, A.M.2
Okamura, Y.3
Strauss, J.F.4
Schroeder, F.5
-
38
-
-
0037442448
-
Peter Downes, C., Nonradioactive methods for the assay of phosphoinositide 3-kinases and phosphoinositide phosphatases and selective detection of signaling lipids in cell and tissue extracts
-
Gray, A., Olsson, H., Batty, I. H., Priganica, L., Peter Downes, C., Nonradioactive methods for the assay of phosphoinositide 3-kinases and phosphoinositide phosphatases and selective detection of signaling lipids in cell and tissue extracts. Anal. Biochem. 2003, 313, 234-245.
-
(2003)
Anal. Biochem.
, vol.313
, pp. 234-245
-
-
Gray, A.1
Olsson, H.2
Batty, I.H.3
Priganica, L.4
-
39
-
-
84863307218
-
IQGAP proteins reveal an atypical phosphoinositide (aPI) binding domain with a pseudo C2 domain fold
-
Dixon, M. J., Gray, A., Schenning, M., Agacan, M. et al., IQGAP proteins reveal an atypical phosphoinositide (aPI) binding domain with a pseudo C2 domain fold. J. Biol. Chem. 2012, 287, 22483-22496.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 22483-22496
-
-
Dixon, M.J.1
Gray, A.2
Schenning, M.3
Agacan, M.4
-
40
-
-
0036182267
-
Time resolved amplification of cryptate emission: a versatile technology to trace biomolecular interactions
-
Bazin, H., Trinquet, E., Mathis, G., Time resolved amplification of cryptate emission: a versatile technology to trace biomolecular interactions. J. Biotechnol. 2002, 82, 233-250.
-
(2002)
J. Biotechnol.
, vol.82
, pp. 233-250
-
-
Bazin, H.1
Trinquet, E.2
Mathis, G.3
-
41
-
-
84862777869
-
Interaction of α-synuclein with vesicles that mimic mitochondrial membranes
-
Zigoneanu, I. G., Yang, Y. J., Krois, A. S., Haque, E., Pielak, G. J., Interaction of α-synuclein with vesicles that mimic mitochondrial membranes. Biochim. Biophys. Acta 2012, 1818, 512-519.
-
(2012)
Biochim. Biophys. Acta
, vol.1818
, pp. 512-519
-
-
Zigoneanu, I.G.1
Yang, Y.J.2
Krois, A.S.3
Haque, E.4
Pielak, G.J.5
-
42
-
-
78651348672
-
Phosphoinositide-incorporated lipid-protein nanodiscs: a tool for studying protein-lipid interactions
-
Kobashigawa, Y., Harada, K., Yoshida, N., Ogura, K., Inagaki, F., Phosphoinositide-incorporated lipid-protein nanodiscs: a tool for studying protein-lipid interactions. Anal. Biochem. 2011, 410, 77-83.
-
(2011)
Anal. Biochem.
, vol.410
, pp. 77-83
-
-
Kobashigawa, Y.1
Harada, K.2
Yoshida, N.3
Ogura, K.4
Inagaki, F.5
-
43
-
-
68049131387
-
Cholesterol modulates the interaction of beta-amyloid peptide with lipid bilayers
-
Qiu, L., Lewis, A., Como, J., Vaughn, M. W. et al., Cholesterol modulates the interaction of beta-amyloid peptide with lipid bilayers. Biophys. J. 2009, 96, 4299-4307.
-
(2009)
Biophys. J.
, vol.96
, pp. 4299-4307
-
-
Qiu, L.1
Lewis, A.2
Como, J.3
Vaughn, M.W.4
-
44
-
-
62449236945
-
Glutamatergic regulation of serine racemase via reversal of PIP2 inhibition
-
Mustafa, A. K., van Rossum, D. B., Patterson, R. L., Maag, D. et al., Glutamatergic regulation of serine racemase via reversal of PIP2 inhibition. Proc. Natl. Acad. Sci. USA 2009, 106, 2921-2926.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 2921-2926
-
-
Mustafa, A.K.1
van Rossum, D.B.2
Patterson, R.L.3
Maag, D.4
-
45
-
-
76749128594
-
A membranotropic region in the C-terminal domain of hepatitis C virus protein NS4B interaction with membranes
-
Guillén, J., González-Alvarez, A., Villalaín, J., A membranotropic region in the C-terminal domain of hepatitis C virus protein NS4B interaction with membranes. Biochim. Biophys. Acta 2010, 1798, 327-337.
-
(2010)
Biochim. Biophys. Acta
, vol.1798
, pp. 327-337
-
-
Guillén, J.1
González-Alvarez, A.2
Villalaín, J.3
-
46
-
-
0036208278
-
A two-photon view of an enzyme at work: Crotalus atrox venom PLA2 interaction with single-lipid and mixed-lipid giant unilamellar vesicles
-
Sanchez, S. A., Bagatolli, L. A., Gratton, E., Hazlett, T. L., A two-photon view of an enzyme at work: Crotalus atrox venom PLA2 interaction with single-lipid and mixed-lipid giant unilamellar vesicles. Biophys. J. 2002, 82, 2232-2243.
-
(2002)
Biophys. J.
, vol.82
, pp. 2232-2243
-
-
Sanchez, S.A.1
Bagatolli, L.A.2
Gratton, E.3
Hazlett, T.L.4
-
47
-
-
80051786035
-
The effect of variable liposome brightness on quantifying lipid-protein interactions using fluorescence correlation spectroscopy
-
Melo, A. M., Prieto, M., Coutinho, A., The effect of variable liposome brightness on quantifying lipid-protein interactions using fluorescence correlation spectroscopy. Biochim. Biophys. Acta 2011, 1808, 2559-2568.
-
(2011)
Biochim. Biophys. Acta
, vol.1808
, pp. 2559-2568
-
-
Melo, A.M.1
Prieto, M.2
Coutinho, A.3
-
48
-
-
67649844238
-
A novel flow cytometric assay to quantify interactions between proteins and membrane lipids
-
Temmerman, K., Nickel, W., A novel flow cytometric assay to quantify interactions between proteins and membrane lipids. J. Lipid. Res. 2009, 50, 1245-1254.
-
(2009)
J. Lipid. Res.
, vol.50
, pp. 1245-1254
-
-
Temmerman, K.1
Nickel, W.2
-
49
-
-
51249113416
-
Calorimetric scrutiny of lipid binding by sticholysin II toxin mutants
-
Alegre-Cebollada, J., Cunietti, M., Herrero-Galán, E., Gavilanes, J. G., Martínez-del-Pozo, A., Calorimetric scrutiny of lipid binding by sticholysin II toxin mutants. J. Mol. Biol. 2008, 382, 920-930.
-
(2008)
J. Mol. Biol.
, vol.382
, pp. 920-930
-
-
Alegre-Cebollada, J.1
Cunietti, M.2
Herrero-Galán, E.3
Gavilanes, J.G.4
Martínez-del-Pozo, A.5
-
50
-
-
43749112983
-
Crystal structure of lactadherin C2 domain at 1.7A resolution with mutational and computational analyses of its membrane-binding motif
-
Shao, C., Novakovic, V. A., Head, J. F., Seaton, B. A., Gilbert, G. E., Crystal structure of lactadherin C2 domain at 1.7A resolution with mutational and computational analyses of its membrane-binding motif. J. Biol. Chem. 2008, 283, 7230-7241.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 7230-7241
-
-
Shao, C.1
Novakovic, V.A.2
Head, J.F.3
Seaton, B.A.4
Gilbert, G.E.5
-
51
-
-
70350105615
-
DLC1 activation requires lipid interaction through a polybasic region preceding the RhoGAP domain
-
Erlmann, P., Schmid, S., Horenkamp, F. A., Geyer, M. et al., DLC1 activation requires lipid interaction through a polybasic region preceding the RhoGAP domain. Mol. Biol. Cell 2009, 20, 4400-4411.
-
(2009)
Mol. Biol. Cell
, vol.20
, pp. 4400-4411
-
-
Erlmann, P.1
Schmid, S.2
Horenkamp, F.A.3
Geyer, M.4
-
52
-
-
66549126907
-
Identification and characterization of the lipid-binding property of GrlR, a locus of enterocyte effacement regulator
-
Jobichen, C., Fernandis, A. Z., Velazquez-Campoy, A., Leung, K. Y. et al., Identification and characterization of the lipid-binding property of GrlR, a locus of enterocyte effacement regulator. Biochem. J. 2009, 420, 191-199.
-
(2009)
Biochem. J.
, vol.420
, pp. 191-199
-
-
Jobichen, C.1
Fernandis, A.Z.2
Velazquez-Campoy, A.3
Leung, K.Y.4
-
53
-
-
60749131043
-
Orientation and peptide-lipid interactions of alamethicin incorporated in phospholipid membranes: polarized infrared and spin-label EPR spectroscopy
-
Marsh, D., Orientation and peptide-lipid interactions of alamethicin incorporated in phospholipid membranes: polarized infrared and spin-label EPR spectroscopy. Biochemistry 2009, 48, 729-737.
-
(2009)
Biochemistry
, vol.48
, pp. 729-737
-
-
Marsh, D.1
-
54
-
-
79751529958
-
A study of the membrane association and regulatory effect of the phospholemman cytoplasmic domain
-
Hughes, E., Whittaker, C. A., Barsukov, I. L., Esmann, M., Middleton, D. A., A study of the membrane association and regulatory effect of the phospholemman cytoplasmic domain. Biochim. Biophys. Acta 2011, 1808, 1021-1031.
-
(2011)
Biochim. Biophys. Acta
, vol.1808
, pp. 1021-1031
-
-
Hughes, E.1
Whittaker, C.A.2
Barsukov, I.L.3
Esmann, M.4
Middleton, D.A.5
-
55
-
-
84858726977
-
Binding of peptides corresponding to the carboxy-terminal region of human-β-defensins-1-3 with model membranes investigated by isothermal titration calorimetry
-
Krishnakumari, V., Nagaraj, R., Binding of peptides corresponding to the carboxy-terminal region of human-β-defensins-1-3 with model membranes investigated by isothermal titration calorimetry. Biochim. Biophys. Acta 2012, 1818, 1386-1394.
-
(2012)
Biochim. Biophys. Acta
, vol.1818
, pp. 1386-1394
-
-
Krishnakumari, V.1
Nagaraj, R.2
-
56
-
-
0035860499
-
Global analysis of protein activities using proteome chips
-
Zhu, H., Bilgin, M., Bangham, R., Hall, D. et al., Global analysis of protein activities using proteome chips. Science 2001, 293, 2101-2105.
-
(2001)
Science
, vol.293
, pp. 2101-2105
-
-
Zhu, H.1
Bilgin, M.2
Bangham, R.3
Hall, D.4
-
57
-
-
23644460355
-
Probing lipid-protein interactions using lipid microarrays
-
Feng, L., Probing lipid-protein interactions using lipid microarrays. Prostaglandins Other Lipid Mediat. 2005, 77, 158-167.
-
(2005)
Prostaglandins Other Lipid Mediat.
, vol.77
, pp. 158-167
-
-
Feng, L.1
-
58
-
-
50049101521
-
Nanodiscs for immobilization of lipid bilayers and membrane receptors: kinetic analysis of cholera toxin binding to a glycolipid receptor
-
Borch, J., Torta, F., Sligar, S. G., Roepstorff, P., Nanodiscs for immobilization of lipid bilayers and membrane receptors: kinetic analysis of cholera toxin binding to a glycolipid receptor. Anal. Chem. 2008, 80, 6245-6252.
-
(2008)
Anal. Chem.
, vol.80
, pp. 6245-6252
-
-
Borch, J.1
Torta, F.2
Sligar, S.G.3
Roepstorff, P.4
-
59
-
-
78649660824
-
Liposome and lipid bilayer arrays towards biosensing applications
-
Bally, M., Bailey, K., Sugihara, K., Grieshaber, D. et al., Liposome and lipid bilayer arrays towards biosensing applications. Small 2010, 6, 2481-2497.
-
(2010)
Small
, vol.6
, pp. 2481-2497
-
-
Bally, M.1
Bailey, K.2
Sugihara, K.3
Grieshaber, D.4
-
60
-
-
84891754230
-
-
Springer, New York .
-
Christensen, S. M., Stamou D., Biomimetic Membranes for Sensor and Separation Applications, Springer, New York 2012, pp. 87--112.
-
(2012)
Biomimetic Membranes for Sensor and Separation Applications
, pp. 87-112
-
-
Christensen, S.M.1
Stamou, D.2
-
61
-
-
0032575493
-
A phosphatidylinositol 4-kinase pleckstrin homology domain that binds phosphatidylinositol 4-monophosphate
-
Stevenson, J. M., Perera, I. Y., Boss, W. F., A phosphatidylinositol 4-kinase pleckstrin homology domain that binds phosphatidylinositol 4-monophosphate. J. Biol. Chem. 1998, 273, 22761-22767.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 22761-22767
-
-
Stevenson, J.M.1
Perera, I.Y.2
Boss, W.F.3
-
62
-
-
0037161475
-
Protein lipid overlay assay
-
Dowler, S., Kular, G., Alessi, D. R., Protein lipid overlay assay. Sci. STKE 2002, 2002, l6.
-
(2002)
Sci. STKE
, vol.2002
-
-
Dowler, S.1
Kular, G.2
Alessi, D.R.3
-
63
-
-
30044434622
-
Lipid microarrays identify key mediators of autoimmune brain inflammation
-
Kanter, J. L., Narayana, S., Ho, P. P., Catz, I. et al., Lipid microarrays identify key mediators of autoimmune brain inflammation. Nat. Med. 2006, 12, 138-143.
-
(2006)
Nat. Med.
, vol.12
, pp. 138-143
-
-
Kanter, J.L.1
Narayana, S.2
Ho, P.P.3
Catz, I.4
-
64
-
-
78649853031
-
A systematic screen for protein-lipid interactions in Saccharomyces cerevisiae
-
Gallego, O., Betts, M. J., Gvozdenovic-Jeremic, J., Maeda, K. et al., A systematic screen for protein-lipid interactions in Saccharomyces cerevisiae. Mol. Syst. Biol. 2010, 6, 430.
-
(2010)
Mol. Syst. Biol.
, vol.6
, pp. 430
-
-
Gallego, O.1
Betts, M.J.2
Gvozdenovic-Jeremic, J.3
Maeda, K.4
-
65
-
-
65249167447
-
Fabrication of fracture-free nanoglassified substrates by layer-by-layer deposition with a paint gun technique for real-time monitoring of protein-lipid interactions
-
Linman, M. J., Culver, S. P., Cheng, Q., Fabrication of fracture-free nanoglassified substrates by layer-by-layer deposition with a paint gun technique for real-time monitoring of protein-lipid interactions. Langmuir. 2009, 25, 3075-3082.
-
(2009)
Langmuir.
, vol.25
, pp. 3075-3082
-
-
Linman, M.J.1
Culver, S.P.2
Cheng, Q.3
-
66
-
-
79960993705
-
Etched glass microarrays with differential resonance for enhanced contrast and sensitivity of surface plasmon resonance imaging analysis
-
Linman, M. J., Abbas, A., Roberts, C. C., Cheng, Q., Etched glass microarrays with differential resonance for enhanced contrast and sensitivity of surface plasmon resonance imaging analysis. Anal. Chem. 2011, 83, 5936-5943.
-
(2011)
Anal. Chem.
, vol.83
, pp. 5936-5943
-
-
Linman, M.J.1
Abbas, A.2
Roberts, C.C.3
Cheng, Q.4
-
67
-
-
11844263927
-
Microfluidic immunoassay for bacterial toxins with supported phospholipid bilayer membranes on poly(dimethylsiloxane)
-
Phillips, K. S., Cheng, Q., Microfluidic immunoassay for bacterial toxins with supported phospholipid bilayer membranes on poly(dimethylsiloxane). Anal. Chem. 2005, 77, 327-334.
-
(2005)
Anal. Chem.
, vol.77
, pp. 327-334
-
-
Phillips, K.S.1
Cheng, Q.2
-
68
-
-
50049103719
-
Development of air-stable, supported membrane arrays with photolithography for study of phosphoinositide-protein interactions using surface plasmon resonance imaging
-
Wang, Z., Wilkop, T., Han, J. H., Dong, Y. et al., Development of air-stable, supported membrane arrays with photolithography for study of phosphoinositide-protein interactions using surface plasmon resonance imaging. Anal. Chem. 2008, 80, 6397-6404.
-
(2008)
Anal. Chem.
, vol.80
, pp. 6397-6404
-
-
Wang, Z.1
Wilkop, T.2
Han, J.H.3
Dong, Y.4
-
69
-
-
43249095010
-
Fluidic and air-stable supported lipid bilayer and cell-mimicking microarrays
-
Deng, Y., Wang, Y., Holtz, B., Li, J. et al., Fluidic and air-stable supported lipid bilayer and cell-mimicking microarrays. J. Am. Chem. Soc. 2008, 130, 6267-6271.
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 6267-6271
-
-
Deng, Y.1
Wang, Y.2
Holtz, B.3
Li, J.4
-
70
-
-
34347230519
-
Microfluidic fabrication of addressable tethered lipid bilayer arrays and optimization using SPR with silane-derivatized nanoglassy substrates
-
Taylor, J. D., Phillips, K. S., Cheng, Q., Microfluidic fabrication of addressable tethered lipid bilayer arrays and optimization using SPR with silane-derivatized nanoglassy substrates. Lab. Chip. 2007, 7, 927-930.
-
(2007)
Lab. Chip.
, vol.7
, pp. 927-930
-
-
Taylor, J.D.1
Phillips, K.S.2
Cheng, Q.3
-
71
-
-
62549109920
-
Microplate-based analysis of protein-membrane binding interactions via immobilization of whole liposomes containing a biotinylated anchor
-
Losey, E. A., Smith, M. D., Meng, M., Best, M. D., Microplate-based analysis of protein-membrane binding interactions via immobilization of whole liposomes containing a biotinylated anchor. Bioconjug. Chem. 2009, 20, 376-383.
-
(2009)
Bioconjug. Chem.
, vol.20
, pp. 376-383
-
-
Losey, E.A.1
Smith, M.D.2
Meng, M.3
Best, M.D.4
-
72
-
-
79951873691
-
Protein microarrays and novel detection platforms
-
Chandra, H., Reddy, P. J., Srivastava, S., Protein microarrays and novel detection platforms. Expert Rev. Proteomics 2011, 8, 61-79.
-
(2011)
Expert Rev. Proteomics
, vol.8
, pp. 61-79
-
-
Chandra, H.1
Reddy, P.J.2
Srivastava, S.3
-
73
-
-
77149157477
-
Label-free detection techniques for protein microarrays: prospects, merits and challenges
-
Ray, S., Mehta, G., Srivastava, S., Label-free detection techniques for protein microarrays: prospects, merits and challenges. Proteomics 2010, 10, 731-748.
-
(2010)
Proteomics
, vol.10
, pp. 731-748
-
-
Ray, S.1
Mehta, G.2
Srivastava, S.3
-
74
-
-
23244445997
-
Micrometer-sized supported lipid bilayer arrays for bacterial toxin binding studies through total internal reflection fluorescence microscopy
-
Moran-Mirabal, J. M., Edel, J. B., Meyer, G. D., Throckmorton, D. et al., Micrometer-sized supported lipid bilayer arrays for bacterial toxin binding studies through total internal reflection fluorescence microscopy. Biophys. J. 2005, 89, 296-305.
-
(2005)
Biophys. J.
, vol.89
, pp. 296-305
-
-
Moran-Mirabal, J.M.1
Edel, J.B.2
Meyer, G.D.3
Throckmorton, D.4
-
75
-
-
55549148405
-
Micropatterned fluid lipid bilayer arrays created using a continuous flow microspotter
-
Smith, K. A., Gale, B. K., Conboy, J. C., Micropatterned fluid lipid bilayer arrays created using a continuous flow microspotter. Anal. Chem. 2008, 80, 7980-7987.
-
(2008)
Anal. Chem.
, vol.80
, pp. 7980-7987
-
-
Smith, K.A.1
Gale, B.K.2
Conboy, J.C.3
-
76
-
-
77951914165
-
Stable, ligand-doped, poly(bis-SorbPC) lipid bilayer arrays for protein binding and detection
-
Joubert, J. R., Smith, K. A., Johnson, E., Keogh, J. P. et al., Stable, ligand-doped, poly(bis-SorbPC) lipid bilayer arrays for protein binding and detection. ACS Appl. Mater. Interfaces 2009, 1, 1310-1315.
-
(2009)
ACS Appl. Mater. Interfaces
, vol.1
, pp. 1310-1315
-
-
Joubert, J.R.1
Smith, K.A.2
Johnson, E.3
Keogh, J.P.4
-
77
-
-
84855768229
-
Microarray analysis of Akt PH domain binding employing synthetic biotinylated analogs of all seven phosphoinositide headgroup isomers
-
Rowland, M. M., Gong, D., Bostic, H. E., Lucas, N. et al., Microarray analysis of Akt PH domain binding employing synthetic biotinylated analogs of all seven phosphoinositide headgroup isomers. Chem. Phys. Lipids 2012, 165, 207-215.
-
(2012)
Chem. Phys. Lipids
, vol.165
, pp. 207-215
-
-
Rowland, M.M.1
Gong, D.2
Bostic, H.E.3
Lucas, N.4
-
78
-
-
84857947890
-
cAMP regulates DEP domain-mediated binding of the guanine nucleotide exchange factor Epac1 to phosphatidic acid at the plasma membrane
-
Consonni, S. V., Gloerich, M., Spanjaard, E., Bos, J. L., cAMP regulates DEP domain-mediated binding of the guanine nucleotide exchange factor Epac1 to phosphatidic acid at the plasma membrane. Proc. Natl. Acad. Sci. USA 2012, 109, 3814-3819.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 3814-3819
-
-
Consonni, S.V.1
Gloerich, M.2
Spanjaard, E.3
Bos, J.L.4
-
79
-
-
62549083819
-
Microplate-based characterization of protein-phosphoinositide binding interactions using a synthetic biotinylated headgroup analogue
-
Gong, D., Smith, M. D., Manna, D., Bostic, H. E. et al., Microplate-based characterization of protein-phosphoinositide binding interactions using a synthetic biotinylated headgroup analogue. Bioconjug. Chem. 2009, 20, 310-316.
-
(2009)
Bioconjug. Chem.
, vol.20
, pp. 310-316
-
-
Gong, D.1
Smith, M.D.2
Manna, D.3
Bostic, H.E.4
-
80
-
-
30744470120
-
Nanoscale glassification of gold substrates for surface plasmon resonance analysis of protein toxins with supported lipid membranes
-
Phillips, K. S., Han, J. H., Martinez, M., Wang, Z. et al., Nanoscale glassification of gold substrates for surface plasmon resonance analysis of protein toxins with supported lipid membranes. Anal. Chem. 2006, 78, 596-603.
-
(2006)
Anal. Chem.
, vol.78
, pp. 596-603
-
-
Phillips, K.S.1
Han, J.H.2
Martinez, M.3
Wang, Z.4
-
81
-
-
84859418071
-
Detection of membrane-binding proteins by surface plasmon resonance with an all-aqueous amplification scheme
-
Liu, Y., Cheng, Q., Detection of membrane-binding proteins by surface plasmon resonance with an all-aqueous amplification scheme. Anal. Chem. 2012, 84, 3179-3186.
-
(2012)
Anal. Chem.
, vol.84
, pp. 3179-3186
-
-
Liu, Y.1
Cheng, Q.2
-
82
-
-
79952615728
-
Probing protein-membrane interactions using solid supported membranes
-
Junghans, A., Champagne, C., Cayot, P., Loupiac, C., Köper, I., Probing protein-membrane interactions using solid supported membranes. Langmuir 2011, 27, 2709-2716.
-
(2011)
Langmuir
, vol.27
, pp. 2709-2716
-
-
Junghans, A.1
Champagne, C.2
Cayot, P.3
Loupiac, C.4
Köper, I.5
-
83
-
-
0027595323
-
Protein binding to supported lipid membranes: investigation of the cholera toxin-ganglioside interaction by simultaneous impedance spectroscopy and surface plasmon resonance
-
Terrettaz, S., Stora, Y., Duschl, C., Vogel, H., Protein binding to supported lipid membranes: investigation of the cholera toxin-ganglioside interaction by simultaneous impedance spectroscopy and surface plasmon resonance. Langmuir 1993, 9, 1361-1369.
-
(1993)
Langmuir
, vol.9
, pp. 1361-1369
-
-
Terrettaz, S.1
Stora, Y.2
Duschl, C.3
Vogel, H.4
-
84
-
-
45549099883
-
Unexpected complexity in the mechanisms that target assembly of the spectrin cytoskeleton
-
Das, A., Base, C., Manna, D., Cho, W., Dubreuil, R. R., Unexpected complexity in the mechanisms that target assembly of the spectrin cytoskeleton. J. Biol. Chem. 2008, 283, 12643-12653.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 12643-12653
-
-
Das, A.1
Base, C.2
Manna, D.3
Cho, W.4
Dubreuil, R.R.5
-
85
-
-
67650077171
-
Sensing based on assessment of non-monotonous effect determined by target analyte: case study on pore-forming compounds
-
Gheorghiu, M., Olaru, A., Tar, A., Polonschii, C., Gheorghiu, E., Sensing based on assessment of non-monotonous effect determined by target analyte: case study on pore-forming compounds. Biosens. Bioelectron. 2009, 24, 3517- 3523.
-
(2009)
Biosens. Bioelectron.
, vol.24
, pp. 3517-3523
-
-
Gheorghiu, M.1
Olaru, A.2
Tar, A.3
Polonschii, C.4
Gheorghiu, E.5
-
86
-
-
33746621673
-
Surface plasmon resonance imaging analysis of protein-receptor binding in supported membrane arrays on gold substrates with calcinated silicate films
-
Phillips, K. S., Wilkop, T., Wu, J. J., Al-Kaysi, R. O., Cheng, Q., Surface plasmon resonance imaging analysis of protein-receptor binding in supported membrane arrays on gold substrates with calcinated silicate films. J. Am. Chem. Soc. 2006, 128, 9590-9591.
-
(2006)
J. Am. Chem. Soc.
, vol.128
, pp. 9590-9591
-
-
Phillips, K.S.1
Wilkop, T.2
Wu, J.J.3
Al-Kaysi, R.O.4
Cheng, Q.5
-
87
-
-
61449223579
-
Regenerable tethered bilayer lipid membrane arrays for multiplexed label-free analysis of lipid-protein interactions on poly(dimethylsiloxane) microchips using SPR imaging
-
Taylor, J. D., Linman, M. J., Wilkop, T., Cheng, Q., Regenerable tethered bilayer lipid membrane arrays for multiplexed label-free analysis of lipid-protein interactions on poly(dimethylsiloxane) microchips using SPR imaging. Anal. Chem. 2009, 81, 1146-1153.
-
(2009)
Anal. Chem.
, vol.81
, pp. 1146-1153
-
-
Taylor, J.D.1
Linman, M.J.2
Wilkop, T.3
Cheng, Q.4
-
88
-
-
79959398473
-
Applications of mass spectrometry to lipids and membranes
-
Harkewicz, R., Dennis, E. A., Applications of mass spectrometry to lipids and membranes. Annu. Rev. Biochem. 2011, 80, 301-325.
-
(2011)
Annu. Rev. Biochem.
, vol.80
, pp. 301-325
-
-
Harkewicz, R.1
Dennis, E.A.2
-
89
-
-
84870225961
-
-
InTech, Croatia
-
D'Santos, C., Lewis, E. A., Integrative Proteomics, InTech, Croatia 2012, pp. 363-378.
-
(2012)
Integrative Proteomics
, pp. 363-378
-
-
D'Santos, C.1
Lewis, E.A.2
-
90
-
-
40949083431
-
Dimeric structures of alpha-synuclein bind preferentially to lipid membranes
-
Giannakis, E., Pacífico, J., Smith, D. P., Hung, L. W. et al., Dimeric structures of alpha-synuclein bind preferentially to lipid membranes. Biochim. Biophys. Acta 2008, 1778, 1112-1119.
-
(2008)
Biochim. Biophys. Acta
, vol.1778
, pp. 1112-1119
-
-
Giannakis, E.1
Pacífico, J.2
Smith, D.P.3
Hung, L.W.4
-
91
-
-
33645887821
-
Direct force measurement of the interaction between liposome and the C2A domain of synaptotagmin I using atomic force microscopy
-
Park, J. H., Kwon, E. Y., Jung, H. I., Kim, D. E., Direct force measurement of the interaction between liposome and the C2A domain of synaptotagmin I using atomic force microscopy. Biotechnol. Lett. 2006, 28, 505-509.
-
(2006)
Biotechnol. Lett.
, vol.28
, pp. 505-509
-
-
Park, J.H.1
Kwon, E.Y.2
Jung, H.I.3
Kim, D.E.4
-
92
-
-
79953839803
-
Label-free quantification of membrane-ligand interactions using backscattering interferometry
-
Baksh, M. M., Kussrow, A. K., Mileni, M., Finn, M. G., Bornhop, D. J., Label-free quantification of membrane-ligand interactions using backscattering interferometry. Nat. Biotechnol. 2011, 29, 357-360.
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 357-360
-
-
Baksh, M.M.1
Kussrow, A.K.2
Mileni, M.3
Finn, M.G.4
Bornhop, D.J.5
-
93
-
-
33747828217
-
BindN: a web-based tool for efficient prediction of DNA and RNA binding sites in amino acid sequences
-
Wang, L., Brown, S. J., BindN: a web-based tool for efficient prediction of DNA and RNA binding sites in amino acid sequences. Nucleic. Acids Res. 2006, 34, W243-W248.
-
(2006)
Nucleic. Acids Res.
, vol.34
-
-
Wang, L.1
Brown, S.J.2
-
94
-
-
47649102100
-
Machine learning approach for prediction of lipid-interacting residues in amino acid sequences
-
Irausquin, S. J., Wang, L., Machine learning approach for prediction of lipid-interacting residues in amino acid sequences. IEEE 2007, 315-319.
-
(2007)
IEEE
, pp. 315-319
-
-
Irausquin, S.J.1
Wang, L.2
-
95
-
-
77956263332
-
Prediction of lipid-binding sites based on support vector machine and position specific scoring matrix
-
Xiong, W., Guo, Y., Li, M., Prediction of lipid-binding sites based on support vector machine and position specific scoring matrix. Protein J. 2010, 29, 427-431.
-
(2010)
Protein J.
, vol.29
, pp. 427-431
-
-
Xiong, W.1
Guo, Y.2
Li, M.3
-
96
-
-
7044224837
-
Computer simulations of membrane proteins
-
Ash, W. L., Zlomislic, M. R., Oloo, E. O., Tieleman, D. P., Computer simulations of membrane proteins. Biochim. Biophys. Acta 2004, 1666, 158-189.
-
(2004)
Biochim. Biophys. Acta
, vol.1666
, pp. 158-189
-
-
Ash, W.L.1
Zlomislic, M.R.2
Oloo, E.O.3
Tieleman, D.P.4
-
97
-
-
33744490360
-
Positioning of proteins in membranes: a computational approach
-
Lomize, A. L., Pogozheva, I. D., Lomize, M. A., Mosberg, H. I., Positioning of proteins in membranes: a computational approach. Protein Sci. 2006, 15, 1318-1333.
-
(2006)
Protein Sci.
, vol.15
, pp. 1318-1333
-
-
Lomize, A.L.1
Pogozheva, I.D.2
Lomize, M.A.3
Mosberg, H.I.4
-
98
-
-
33644893631
-
Coarse grained protein-lipid model with application to lipoprotein particles
-
Shih, A. Y., Arkhipov, A., Freddolino, P. L., Schulten, K., Coarse grained protein-lipid model with application to lipoprotein particles. J. Phys. Chem. B 2006, 110, 3674-3684.
-
(2006)
J. Phys. Chem. B
, vol.110
, pp. 3674-3684
-
-
Shih, A.Y.1
Arkhipov, A.2
Freddolino, P.L.3
Schulten, K.4
-
99
-
-
41449119304
-
Coarse-grained MD simulations of membrane protein-bilayer self-assembly
-
Scott, K. A., Bond, P. J., Ivetac, A., Chetwynd, A. P. et al., Coarse-grained MD simulations of membrane protein-bilayer self-assembly. Structure 2008, 16, 621-630.
-
(2008)
Structure
, vol.16
, pp. 621-630
-
-
Scott, K.A.1
Bond, P.J.2
Ivetac, A.3
Chetwynd, A.P.4
-
100
-
-
39449131104
-
Coarse-grained simulation: a high-throughput computational approach to membrane proteins
-
Sansom, M. S., Scott, K. A., Bond, P. J., Coarse-grained simulation: a high-throughput computational approach to membrane proteins. Biochem. Soc. Trans. 2008, 36, 27-32.
-
(2008)
Biochem. Soc. Trans.
, vol.36
, pp. 27-32
-
-
Sansom, M.S.1
Scott, K.A.2
Bond, P.J.3
-
101
-
-
77954799754
-
Coarse grained molecular dynamics simulations of transmembrane protein-lipid systems
-
Spijker, P., van Hoof, B., Debertrand, M., Markvoort, A. J. et al., Coarse grained molecular dynamics simulations of transmembrane protein-lipid systems. Int. J. Mol. Sci. 2010, 11, 2393-2420.
-
(2010)
Int. J. Mol. Sci.
, vol.11
, pp. 2393-2420
-
-
Spijker, P.1
van Hoof, B.2
Debertrand, M.3
Markvoort, A.J.4
-
102
-
-
57049124381
-
CGDB: a database of membrane protein/lipid interactions by coarse-grained molecular dynamics simulations
-
Chetwynd, A. P., Scott, K. A., Mokrab, Y., Sansom, M. S., CGDB: a database of membrane protein/lipid interactions by coarse-grained molecular dynamics simulations. Mol. Membr. Biol. 2008, 25, 662-669.
-
(2008)
Mol. Membr. Biol.
, vol.25
, pp. 662-669
-
-
Chetwynd, A.P.1
Scott, K.A.2
Mokrab, Y.3
Sansom, M.S.4
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