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Volumn 13, Issue 1, 2012, Pages

Integrated miRNA, mRNA and protein expression analysis reveals the role of post-transcriptional regulation in controlling CHO cell growth rate

Author keywords

Chinese hamster ovary; CHO cells; Growth rate; Microarray; MicroRNA; mRNA; Proteomics

Indexed keywords

HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN; MESSENGER RNA; MICRORNA;

EID: 84869224817     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-13-656     Document Type: Article
Times cited : (58)

References (76)
  • 1
    • 58249088751 scopus 로고    scopus 로고
    • MicroRNAs: target recognition and regulatory functions
    • 10.1016/j.cell.2009.01.002, 19167326
    • Bartel DP. MicroRNAs: target recognition and regulatory functions. Cell 2009, 136(2):215-233. 10.1016/j.cell.2009.01.002, 19167326.
    • (2009) Cell , vol.136 , Issue.2 , pp. 215-233
    • Bartel, D.P.1
  • 2
    • 0027751663 scopus 로고
    • The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
    • 10.1016/0092-8674(93)90529-Y, 8252621
    • Lee RC, Feinbaum RL, Ambros V. The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 1993, 75(5):843-854. 10.1016/0092-8674(93)90529-Y, 8252621.
    • (1993) Cell , vol.75 , Issue.5 , pp. 843-854
    • Lee, R.C.1    Feinbaum, R.L.2    Ambros, V.3
  • 3
    • 78651293534 scopus 로고    scopus 로고
    • MiRBase: integrating microRNA annotation and deep-sequencing data
    • 3013655, 21037258 Database issue
    • Kozomara A, Griffiths-Jones S. miRBase: integrating microRNA annotation and deep-sequencing data. Nucleic Acids Res 2011, 39(Database issue):D152-D157. 3013655, 21037258.
    • (2011) Nucleic Acids Res , vol.39
    • Kozomara, A.1    Griffiths-Jones, S.2
  • 4
    • 33645119514 scopus 로고    scopus 로고
    • MicroRNAs direct rapid deadenylation of mRNA
    • 10.1073/pnas.0510928103, 1449641, 16495412
    • Wu L, Fan J, Belasco JG. MicroRNAs direct rapid deadenylation of mRNA. Proc Natl Acad Sci U S A 2006, 103(11):4034-4039. 10.1073/pnas.0510928103, 1449641, 16495412.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , Issue.11 , pp. 4034-4039
    • Wu, L.1    Fan, J.2    Belasco, J.G.3
  • 5
    • 43449090367 scopus 로고    scopus 로고
    • MicroRNA-10a binds the 5'UTR of ribosomal protein mRNAs and enhances their translation
    • 10.1016/j.molcel.2008.05.001, 18498749
    • Orom UA, Nielsen FC, Lund AH. MicroRNA-10a binds the 5'UTR of ribosomal protein mRNAs and enhances their translation. Mol Cell 2008, 30(4):460-471. 10.1016/j.molcel.2008.05.001, 18498749.
    • (2008) Mol Cell , vol.30 , Issue.4 , pp. 460-471
    • Orom, U.A.1    Nielsen, F.C.2    Lund, A.H.3
  • 6
    • 52949129831 scopus 로고    scopus 로고
    • Circular reasoning: microRNAs and cell-cycle control
    • 10.1016/j.tibs.2008.06.008, 2824243, 18774719
    • Chivukula RR, Mendell JT. Circular reasoning: microRNAs and cell-cycle control. Trends Biochem Sci 2008, 33(10):474-481. 10.1016/j.tibs.2008.06.008, 2824243, 18774719.
    • (2008) Trends Biochem Sci , vol.33 , Issue.10 , pp. 474-481
    • Chivukula, R.R.1    Mendell, J.T.2
  • 7
    • 33749528151 scopus 로고    scopus 로고
    • MiRNAs and apoptosis: RNAs to die for
    • 10.1038/sj.onc.1209912, 17028597
    • Jovanovic M, Hengartner MO. miRNAs and apoptosis: RNAs to die for. Oncogene 2006, 25(46):6176-6187. 10.1038/sj.onc.1209912, 17028597.
    • (2006) Oncogene , vol.25 , Issue.46 , pp. 6176-6187
    • Jovanovic, M.1    Hengartner, M.O.2
  • 8
    • 84858126071 scopus 로고    scopus 로고
    • MicroRNA dysregulation in cancer: diagnostics, monitoring and therapeutics. A comprehensive review
    • 10.1002/emmm.201100209, 3376845, 22351564
    • Iorio MV, Croce CM. MicroRNA dysregulation in cancer: diagnostics, monitoring and therapeutics. A comprehensive review. EMBO Mol Med 2012, 4(3):143-159. 10.1002/emmm.201100209, 3376845, 22351564.
    • (2012) EMBO Mol Med , vol.4 , Issue.3 , pp. 143-159
    • Iorio, M.V.1    Croce, C.M.2
  • 9
    • 80052102044 scopus 로고    scopus 로고
    • Diabetes complications: the microRNA perspective
    • 10.2337/db11-0082, 3121430, 21709278
    • Kantharidis P, Wang B, Carew RM, Lan HY. Diabetes complications: the microRNA perspective. Diabetes 2011, 60(7):1832-1837. 10.2337/db11-0082, 3121430, 21709278.
    • (2011) Diabetes , vol.60 , Issue.7 , pp. 1832-1837
    • Kantharidis, P.1    Wang, B.2    Carew, R.M.3    Lan, H.Y.4
  • 11
    • 60149095444 scopus 로고    scopus 로고
    • Most mammalian mRNAs are conserved targets of microRNAs
    • 2612969, 18955434
    • Friedman RC, Farh KK, Burge CB, Bartel DP. Most mammalian mRNAs are conserved targets of microRNAs. Genome Res 2009, 19(1):92-105. 2612969, 18955434.
    • (2009) Genome Res , vol.19 , Issue.1 , pp. 92-105
    • Friedman, R.C.1    Farh, K.K.2    Burge, C.B.3    Bartel, D.P.4
  • 12
    • 77951092028 scopus 로고    scopus 로고
    • Multiple microRNAs modulate p21Cip1/Waf1 expression by directly targeting its 3' untranslated region
    • 10.1038/onc.2010.34, 20190813
    • Wu S, Huang S, Ding J, Zhao Y, Liang L, Liu T, Zhan R, He X. Multiple microRNAs modulate p21Cip1/Waf1 expression by directly targeting its 3' untranslated region. Oncogene 2010, 29(15):2302-2308. 10.1038/onc.2010.34, 20190813.
    • (2010) Oncogene , vol.29 , Issue.15 , pp. 2302-2308
    • Wu, S.1    Huang, S.2    Ding, J.3    Zhao, Y.4    Liang, L.5    Liu, T.6    Zhan, R.7    He, X.8
  • 14
    • 11844278458 scopus 로고    scopus 로고
    • Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
    • 10.1016/j.cell.2004.12.035, 15652477
    • Lewis BP, Burge CB, Bartel DP. Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell 2005, 120(1):15-20. 10.1016/j.cell.2004.12.035, 15652477.
    • (2005) Cell , vol.120 , Issue.1 , pp. 15-20
    • Lewis, B.P.1    Burge, C.B.2    Bartel, D.P.3
  • 15
    • 34547441263 scopus 로고    scopus 로고
    • Target mRNAs are repressed as efficiently by microRNA-binding sites in the 5' UTR as in the 3' UTR
    • 10.1073/pnas.0703820104, 1887587, 17535905
    • Lytle JR, Yario TA, Steitz JA. Target mRNAs are repressed as efficiently by microRNA-binding sites in the 5' UTR as in the 3' UTR. Proc Natl Acad Sci U S A 2007, 104(23):9667-9672. 10.1073/pnas.0703820104, 1887587, 17535905.
    • (2007) Proc Natl Acad Sci U S A , vol.104 , Issue.23 , pp. 9667-9672
    • Lytle, J.R.1    Yario, T.A.2    Steitz, J.A.3
  • 16
    • 80053248649 scopus 로고    scopus 로고
    • Specific sequence determinants of miR-15/107 microRNA gene group targets
    • 10.1093/nar/gkr532, 3185429, 21724616
    • Nelson PT, Wang WX, Mao G, Wilfred BR, Xie K, Jennings MH, Gao Z, Wang X. Specific sequence determinants of miR-15/107 microRNA gene group targets. Nucleic Acids Res 2011, 39(18):8163-8172. 10.1093/nar/gkr532, 3185429, 21724616.
    • (2011) Nucleic Acids Res , vol.39 , Issue.18 , pp. 8163-8172
    • Nelson, P.T.1    Wang, W.X.2    Mao, G.3    Wilfred, B.R.4    Xie, K.5    Jennings, M.H.6    Gao, Z.7    Wang, X.8
  • 17
    • 74049088856 scopus 로고    scopus 로고
    • Lost in translation: an assessment and perspective for computational microRNA target identification
    • 10.1093/bioinformatics/btp565, 19789267
    • Alexiou P, Maragkakis M, Papadopoulos GL, Reczko M, Hatzigeorgiou AG. Lost in translation: an assessment and perspective for computational microRNA target identification. Bioinformatics 2009, 25(23):3049-3055. 10.1093/bioinformatics/btp565, 19789267.
    • (2009) Bioinformatics , vol.25 , Issue.23 , pp. 3049-3055
    • Alexiou, P.1    Maragkakis, M.2    Papadopoulos, G.L.3    Reczko, M.4    Hatzigeorgiou, A.G.5
  • 18
    • 33750318273 scopus 로고    scopus 로고
    • A guide through present computational approaches for the identification of mammalian microRNA targets
    • 10.1038/nmeth954, 17060911
    • Sethupathy P, Megraw M, Hatzigeorgiou AG. A guide through present computational approaches for the identification of mammalian microRNA targets. Nat Methods 2006, 3(11):881-886. 10.1038/nmeth954, 17060911.
    • (2006) Nat Methods , vol.3 , Issue.11 , pp. 881-886
    • Sethupathy, P.1    Megraw, M.2    Hatzigeorgiou, A.G.3
  • 20
    • 8344271026 scopus 로고    scopus 로고
    • Production of recombinant protein therapeutics in cultivated mammalian cells
    • 10.1038/nbt1026, 15529164
    • Wurm FM. Production of recombinant protein therapeutics in cultivated mammalian cells. Nat Biotechnol 2004, 22(11):1393-1398. 10.1038/nbt1026, 15529164.
    • (2004) Nat Biotechnol , vol.22 , Issue.11 , pp. 1393-1398
    • Wurm, F.M.1
  • 21
    • 79961191745 scopus 로고    scopus 로고
    • The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell line
    • 10.1038/nbt.1932, 3164356, 21804562
    • Xu X, Nagarajan H, Lewis NE, Pan S, Cai Z, Liu X, Chen W, Xie M, Wang W, Hammond S, et al. The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell line. Nat Biotechnol 2011, 29(8):735-741. 10.1038/nbt.1932, 3164356, 21804562.
    • (2011) Nat Biotechnol , vol.29 , Issue.8 , pp. 735-741
    • Xu, X.1    Nagarajan, H.2    Lewis, N.E.3    Pan, S.4    Cai, Z.5    Liu, X.6    Chen, W.7    Xie, M.8    Wang, W.9    Hammond, S.10
  • 22
    • 77955081300 scopus 로고    scopus 로고
    • Into the unknown: expression profiling without genome sequence information in CHO by next generation sequencing
    • 10.1093/nar/gkq116, 2896516, 20194116
    • Birzele F, Schaub J, Rust W, Clemens C, Baum P, Kaufmann H, Weith A, Schulz TW, Hildebrandt T. Into the unknown: expression profiling without genome sequence information in CHO by next generation sequencing. Nucleic Acids Res 2010, 38(12):3999-4010. 10.1093/nar/gkq116, 2896516, 20194116.
    • (2010) Nucleic Acids Res , vol.38 , Issue.12 , pp. 3999-4010
    • Birzele, F.1    Schaub, J.2    Rust, W.3    Clemens, C.4    Baum, P.5    Kaufmann, H.6    Weith, A.7    Schulz, T.W.8    Hildebrandt, T.9
  • 23
    • 79251576820 scopus 로고    scopus 로고
    • Genomic sequencing and analysis of a Chinese hamster ovary cell line using Illumina sequencing technology
    • 10.1186/1471-2164-12-67, 3038171, 21269493
    • Hammond S, Swanberg JC, Kaplarevic M, Lee KH. Genomic sequencing and analysis of a Chinese hamster ovary cell line using Illumina sequencing technology. BMC Genomics 2011, 12:67. 10.1186/1471-2164-12-67, 3038171, 21269493.
    • (2011) BMC Genomics , vol.12 , pp. 67
    • Hammond, S.1    Swanberg, J.C.2    Kaplarevic, M.3    Lee, K.H.4
  • 24
    • 34250307966 scopus 로고    scopus 로고
    • Initial identification of low temperature and culture stage induction of miRNA expression in suspension CHO-K1 cells
    • 10.1016/j.jbiotec.2007.04.020, 17570552
    • Gammell P, Barron N, Kumar N, Clynes M. Initial identification of low temperature and culture stage induction of miRNA expression in suspension CHO-K1 cells. J Biotechnol 2007, 130(3):213-218. 10.1016/j.jbiotec.2007.04.020, 17570552.
    • (2007) J Biotechnol , vol.130 , Issue.3 , pp. 213-218
    • Gammell, P.1    Barron, N.2    Kumar, N.3    Clynes, M.4
  • 26
    • 79955132774 scopus 로고    scopus 로고
    • Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    • 3119918, 21392545
    • Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Siederdissen CH, Bort JA, Wieser M, et al. Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering. J Biotechnol 2011, 153(1-2):62-75. 3119918, 21392545.
    • (2011) J Biotechnol , vol.153 , Issue.1-2 , pp. 62-75
    • Hackl, M.1    Jakobi, T.2    Blom, J.3    Doppmeier, D.4    Brinkrolf, K.5    Szczepanowski, R.6    Bernhart, S.H.7    Siederdissen, C.H.8    Bort, J.A.9    Wieser, M.10
  • 27
    • 84862778524 scopus 로고    scopus 로고
    • Profiling conserved microRNA expression in recombinant CHO cell lines using Illumina sequencing
    • 10.1002/bit.24415, 22189905
    • Hammond S, Swanberg JC, Polson SW, Lee KH. Profiling conserved microRNA expression in recombinant CHO cell lines using Illumina sequencing. Biotechnol Bioeng 2012, 109(6):1371-1375. 10.1002/bit.24415, 22189905.
    • (2012) Biotechnol Bioeng , vol.109 , Issue.6 , pp. 1371-1375
    • Hammond, S.1    Swanberg, J.C.2    Polson, S.W.3    Lee, K.H.4
  • 29
    • 78651507094 scopus 로고    scopus 로고
    • Engineering CHO cell growth and recombinant protein productivity by overexpression of miR-7
    • 10.1016/j.jbiotec.2010.12.005, 21167223
    • Barron N, Kumar N, Sanchez N, Doolan P, Clarke C, Meleady P, O'Sullivan F, Clynes M. Engineering CHO cell growth and recombinant protein productivity by overexpression of miR-7. J Biotechnol 2011, 151(2):204-211. 10.1016/j.jbiotec.2010.12.005, 21167223.
    • (2011) J Biotechnol , vol.151 , Issue.2 , pp. 204-211
    • Barron, N.1    Kumar, N.2    Sanchez, N.3    Doolan, P.4    Clarke, C.5    Meleady, P.6    O'Sullivan, F.7    Clynes, M.8
  • 30
    • 79956158579 scopus 로고    scopus 로고
    • A novel microRNA mmu-miR-466h affects apoptosis regulation in mammalian cells
    • 10.1002/bit.23092, 3099433, 21337326
    • Druz A, Chu C, Majors B, Santuary R, Betenbaugh M, Shiloach J. A novel microRNA mmu-miR-466h affects apoptosis regulation in mammalian cells. Biotechnol Bioeng 2011, 108(7):1651-1661. 10.1002/bit.23092, 3099433, 21337326.
    • (2011) Biotechnol Bioeng , vol.108 , Issue.7 , pp. 1651-1661
    • Druz, A.1    Chu, C.2    Majors, B.3    Santuary, R.4    Betenbaugh, M.5    Shiloach, J.6
  • 31
    • 80052389765 scopus 로고    scopus 로고
    • Large scale microarray profiling and coexpression network analysis of CHO cells identifies transcriptional modules associated with growth and productivity
    • 10.1016/j.jbiotec.2011.07.011, 21801763
    • Clarke C, Doolan P, Barron N, Meleady P, O'Sullivan F, Gammell P, Melville M, Leonard M, Clynes M. Large scale microarray profiling and coexpression network analysis of CHO cells identifies transcriptional modules associated with growth and productivity. J Biotechnol 2011, 155(3):350-359. 10.1016/j.jbiotec.2011.07.011, 21801763.
    • (2011) J Biotechnol , vol.155 , Issue.3 , pp. 350-359
    • Clarke, C.1    Doolan, P.2    Barron, N.3    Meleady, P.4    O'Sullivan, F.5    Gammell, P.6    Melville, M.7    Leonard, M.8    Clynes, M.9
  • 32
    • 79953693020 scopus 로고    scopus 로고
    • Integration of transcriptomics, proteomics, and microRNA analyses reveals novel microRNA regulation of targets in the mammalian inner ear
    • 10.1371/journal.pone.0018195, 3071727, 21483685
    • Elkan-Miller T, Ulitsky I, Hertzano R, Rudnicki A, Dror AA, Lenz DR, Elkon R, Irmler M, Beckers J, Shamir R, et al. Integration of transcriptomics, proteomics, and microRNA analyses reveals novel microRNA regulation of targets in the mammalian inner ear. PLoS One 2011, 6(4):e18195. 10.1371/journal.pone.0018195, 3071727, 21483685.
    • (2011) PLoS One , vol.6 , Issue.4
    • Elkan-Miller, T.1    Ulitsky, I.2    Hertzano, R.3    Rudnicki, A.4    Dror, A.A.5    Lenz, D.R.6    Elkon, R.7    Irmler, M.8    Beckers, J.9    Shamir, R.10
  • 33
    • 77956275374 scopus 로고    scopus 로고
    • MicroRNA, mRNA, and protein expression link development and aging in human and macaque brain
    • 10.1101/gr.106849.110, 2928499, 20647238
    • Somel M, Guo S, Fu N, Yan Z, Hu HY, Xu Y, Yuan Y, Ning Z, Hu Y, Menzel C, et al. MicroRNA, mRNA, and protein expression link development and aging in human and macaque brain. Genome Res 2010, 20(9):1207-1218. 10.1101/gr.106849.110, 2928499, 20647238.
    • (2010) Genome Res , vol.20 , Issue.9 , pp. 1207-1218
    • Somel, M.1    Guo, S.2    Fu, N.3    Yan, Z.4    Hu, H.Y.5    Xu, Y.6    Yuan, Y.7    Ning, Z.8    Hu, Y.9    Menzel, C.10
  • 34
    • 84862831034 scopus 로고    scopus 로고
    • Strand-Specific miR-28-5p and miR-28-3p Have Distinct Effects in Colorectal Cancer Cells
    • e889, 10.1053/j.gastro.2011.12.047, 22240480
    • Almeida MI, Nicoloso MS, Zeng L, Ivan C, Spizzo R, Gafa R, Xiao L, Zhang X, Vannini I, Fanini F, et al. Strand-Specific miR-28-5p and miR-28-3p Have Distinct Effects in Colorectal Cancer Cells. Gastroenterology 2012, 142(4):886-896. e889, 10.1053/j.gastro.2011.12.047, 22240480.
    • (2012) Gastroenterology , vol.142 , Issue.4 , pp. 886-896
    • Almeida, M.I.1    Nicoloso, M.S.2    Zeng, L.3    Ivan, C.4    Spizzo, R.5    Gafa, R.6    Xiao, L.7    Zhang, X.8    Vannini, I.9    Fanini, F.10
  • 36
    • 84859444423 scopus 로고    scopus 로고
    • Both inhibition and enhanced expression of miR-31 lead to reduced migration and invasion of pancreatic cancer cells
    • 10.1002/gcc.21941, 22344632
    • Laurila EM, Sandstrom S, Rantanen LM, Autio R, Kallioniemi A. Both inhibition and enhanced expression of miR-31 lead to reduced migration and invasion of pancreatic cancer cells. Genes Chromosomes Cancer 2012, 51(6):557-568. 10.1002/gcc.21941, 22344632.
    • (2012) Genes Chromosomes Cancer , vol.51 , Issue.6 , pp. 557-568
    • Laurila, E.M.1    Sandstrom, S.2    Rantanen, L.M.3    Autio, R.4    Kallioniemi, A.5
  • 37
    • 79958288052 scopus 로고    scopus 로고
    • MicroRNA-451 functions as a tumor suppressor in human non-small cell lung cancer by targeting ras-related protein 14 (RAB14)
    • 10.1038/onc.2010.642, 21358675
    • Wang R, Wang ZX, Yang JS, Pan X, De W, Chen LB. MicroRNA-451 functions as a tumor suppressor in human non-small cell lung cancer by targeting ras-related protein 14 (RAB14). Oncogene 2011, 30(23):2644-2658. 10.1038/onc.2010.642, 21358675.
    • (2011) Oncogene , vol.30 , Issue.23 , pp. 2644-2658
    • Wang, R.1    Wang, Z.X.2    Yang, J.S.3    Pan, X.4    De, W.5    Chen, L.B.6
  • 38
    • 70350383632 scopus 로고    scopus 로고
    • MicroRNA-1/206 targets c-Met and inhibits rhabdomyosarcoma development
    • 10.1074/jbc.M109.020511, 2785592, 19710019
    • Yan D, Dong Xda E, Chen X, Wang L, Lu C, Wang J, Qu J, Tu L. MicroRNA-1/206 targets c-Met and inhibits rhabdomyosarcoma development. J Biol Chem 2009, 284(43):29596-29604. 10.1074/jbc.M109.020511, 2785592, 19710019.
    • (2009) J Biol Chem , vol.284 , Issue.43 , pp. 29596-29604
    • Yan, D.1    Dong Xda, E.2    Chen, X.3    Wang, L.4    Lu, C.5    Wang, J.6    Qu, J.7    Tu, L.8
  • 39
    • 70349220767 scopus 로고    scopus 로고
    • Repression of the miR-17-92 cluster by p53 has an important function in hypoxia-induced apoptosis
    • 10.1038/emboj.2009.214, 2750010, 19696742
    • Yan HL, Xue G, Mei Q, Wang YZ, Ding FX, Liu MF, Lu MH, Tang Y, Yu HY, Sun SH. Repression of the miR-17-92 cluster by p53 has an important function in hypoxia-induced apoptosis. EMBO J 2009, 28(18):2719-2732. 10.1038/emboj.2009.214, 2750010, 19696742.
    • (2009) EMBO J , vol.28 , Issue.18 , pp. 2719-2732
    • Yan, H.L.1    Xue, G.2    Mei, Q.3    Wang, Y.Z.4    Ding, F.X.5    Liu, M.F.6    Lu, M.H.7    Tang, Y.8    Yu, H.Y.9    Sun, S.H.10
  • 40
    • 83055162537 scopus 로고    scopus 로고
    • Down-regulation of MiR-206 promotes proliferation and invasion of laryngeal cancer by regulating VEGF expression
    • Zhang T, Liu M, Wang C, Lin C, Sun Y, Jin D. Down-regulation of MiR-206 promotes proliferation and invasion of laryngeal cancer by regulating VEGF expression. Anticancer Res 2011, 31(11):3859-3863.
    • (2011) Anticancer Res , vol.31 , Issue.11 , pp. 3859-3863
    • Zhang, T.1    Liu, M.2    Wang, C.3    Lin, C.4    Sun, Y.5    Jin, D.6
  • 41
    • 77954382780 scopus 로고    scopus 로고
    • Mir-17-92, a cluster of miRNAs in the midst of the cancer network
    • 10.1016/j.biocel.2010.03.004, 20227518
    • Olive V, Jiang I, He L. mir-17-92, a cluster of miRNAs in the midst of the cancer network. Int J Biochem Cell Biol 2010, 42(8):1348-1354. 10.1016/j.biocel.2010.03.004, 20227518.
    • (2010) Int J Biochem Cell Biol , vol.42 , Issue.8 , pp. 1348-1354
    • Olive, V.1    Jiang, I.2    He, L.3
  • 42
    • 20444479428 scopus 로고    scopus 로고
    • C-Myc-regulated microRNAs modulate E2F1 expression
    • 10.1038/nature03677, 15944709
    • O'Donnell KA, Wentzel EA, Zeller KI, Dang CV, Mendell JT. c-Myc-regulated microRNAs modulate E2F1 expression. Nature 2005, 435(7043):839-843. 10.1038/nature03677, 15944709.
    • (2005) Nature , vol.435 , Issue.7043 , pp. 839-843
    • O''Donnell, K.A.1    Wentzel, E.A.2    Zeller, K.I.3    Dang, C.V.4    Mendell, J.T.5
  • 46
    • 79953330808 scopus 로고    scopus 로고
    • Analysis of MiR-195 and MiR-497 expression, regulation and role in breast cancer
    • 10.1158/1078-0432.CCR-10-1800, 21350001
    • Li D, Zhao Y, Liu C, Chen X, Qi Y, Jiang Y, Zou C, Zhang X, Liu S, Wang X, et al. Analysis of MiR-195 and MiR-497 expression, regulation and role in breast cancer. Clin Cancer Res 2011, 17(7):1722-1730. 10.1158/1078-0432.CCR-10-1800, 21350001.
    • (2011) Clin Cancer Res , vol.17 , Issue.7 , pp. 1722-1730
    • Li, D.1    Zhao, Y.2    Liu, C.3    Chen, X.4    Qi, Y.5    Jiang, Y.6    Zou, C.7    Zhang, X.8    Liu, S.9    Wang, X.10
  • 47
    • 63449104333 scopus 로고    scopus 로고
    • MicroRNA-mediated regulation of Ubc9 expression in cancer cells
    • 10.1158/1078-0432.CCR-08-0820, 2846614, 19223510
    • Wu F, Zhu S, Ding Y, Beck WT, Mo YY. MicroRNA-mediated regulation of Ubc9 expression in cancer cells. Clin Cancer Res 2009, 15(5):1550-1557. 10.1158/1078-0432.CCR-08-0820, 2846614, 19223510.
    • (2009) Clin Cancer Res , vol.15 , Issue.5 , pp. 1550-1557
    • Wu, F.1    Zhu, S.2    Ding, Y.3    Beck, W.T.4    Mo, Y.Y.5
  • 48
    • 79952539094 scopus 로고    scopus 로고
    • Upregulation of microRNA-451 increases cisplatin sensitivity of non-small cell lung cancer cell line (A549)
    • 10.1186/1756-9966-30-20, 3051912, 21329503
    • Bian HB, Pan X, Yang JS, Wang ZX, De W. Upregulation of microRNA-451 increases cisplatin sensitivity of non-small cell lung cancer cell line (A549). J Exp Clin Cancer Res 2011, 30:20. 10.1186/1756-9966-30-20, 3051912, 21329503.
    • (2011) J Exp Clin Cancer Res , vol.30 , pp. 20
    • Bian, H.B.1    Pan, X.2    Yang, J.S.3    Wang, Z.X.4    De, W.5
  • 49
    • 53349147033 scopus 로고    scopus 로고
    • Eukaryotic initiation factor 6 is rate-limiting in translation, growth and transformation
    • 10.1038/nature07267, 2753212, 18784653
    • Gandin V, Miluzio A, Barbieri AM, Beugnet A, Kiyokawa H, Marchisio PC, Biffo S. Eukaryotic initiation factor 6 is rate-limiting in translation, growth and transformation. Nature 2008, 455(7213):684-688. 10.1038/nature07267, 2753212, 18784653.
    • (2008) Nature , vol.455 , Issue.7213 , pp. 684-688
    • Gandin, V.1    Miluzio, A.2    Barbieri, A.M.3    Beugnet, A.4    Kiyokawa, H.5    Marchisio, P.C.6    Biffo, S.7
  • 50
    • 0345732640 scopus 로고    scopus 로고
    • MTOR controls cell cycle progression through its cell growth effectors S6K1 and 4E-BP1/eukaryotic translation initiation factor 4E
    • 10.1128/MCB.24.1.200-216.2004, 303352, 14673156
    • Fingar DC, Richardson CJ, Tee AR, Cheatham L, Tsou C, Blenis J. mTOR controls cell cycle progression through its cell growth effectors S6K1 and 4E-BP1/eukaryotic translation initiation factor 4E. Mol Cell Biol 2004, 24(1):200-216. 10.1128/MCB.24.1.200-216.2004, 303352, 14673156.
    • (2004) Mol Cell Biol , vol.24 , Issue.1 , pp. 200-216
    • Fingar, D.C.1    Richardson, C.J.2    Tee, A.R.3    Cheatham, L.4    Tsou, C.5    Blenis, J.6
  • 51
    • 63649157049 scopus 로고    scopus 로고
    • How common are extraribosomal functions of ribosomal proteins?
    • 10.1016/j.molcel.2009.03.006, 2679180, 19362532
    • Warner JR, McIntosh KB. How common are extraribosomal functions of ribosomal proteins?. Mol Cell 2009, 34(1):3-11. 10.1016/j.molcel.2009.03.006, 2679180, 19362532.
    • (2009) Mol Cell , vol.34 , Issue.1 , pp. 3-11
    • Warner, J.R.1    McIntosh, K.B.2
  • 52
    • 33846549173 scopus 로고    scopus 로고
    • A housekeeper with power of attorney: the rRNA genes in ribosome biogenesis
    • 10.1007/s00018-006-6278-1, 17171232
    • Moss T, Langlois F, Gagnon-Kugler T, Stefanovsky V. A housekeeper with power of attorney: the rRNA genes in ribosome biogenesis. Cell Mol Life Sci 2007, 64(1):29-49. 10.1007/s00018-006-6278-1, 17171232.
    • (2007) Cell Mol Life Sci , vol.64 , Issue.1 , pp. 29-49
    • Moss, T.1    Langlois, F.2    Gagnon-Kugler, T.3    Stefanovsky, V.4
  • 54
    • 0033611568 scopus 로고    scopus 로고
    • P53 represses ribosomal gene transcription
    • 10.1038/sj.onc.1202402, 10023689
    • Budde A, Grummt I. p53 represses ribosomal gene transcription. Oncogene 1999, 18(4):1119-1124. 10.1038/sj.onc.1202402, 10023689.
    • (1999) Oncogene , vol.18 , Issue.4 , pp. 1119-1124
    • Budde, A.1    Grummt, I.2
  • 57
    • 34547577319 scopus 로고    scopus 로고
    • P53 and its isoforms in cancer
    • 10.1038/sj.bjc.6603886, 2360320,2360320, 17637683
    • Bourdon JC. p53 and its isoforms in cancer. Br J Cancer 2007, 97(3):277-282. 10.1038/sj.bjc.6603886, 2360320,2360320, 17637683.
    • (2007) Br J Cancer , vol.97 , Issue.3 , pp. 277-282
    • Bourdon, J.C.1
  • 58
    • 80052065124 scopus 로고    scopus 로고
    • YB-1 evokes susceptibility to cancer through cytokinesis failure, mitotic dysfunction and HER2 amplification
    • 10.1038/onc.2011.82, 3121916, 21423216
    • Davies AH, Barrett I, Pambid MR, Hu K, Stratford AL, Freeman S, Berquin IM, Pelech S, Hieter P, Maxwell C, et al. YB-1 evokes susceptibility to cancer through cytokinesis failure, mitotic dysfunction and HER2 amplification. Oncogene 2011, 30(34):3649-3660. 10.1038/onc.2011.82, 3121916, 21423216.
    • (2011) Oncogene , vol.30 , Issue.34 , pp. 3649-3660
    • Davies, A.H.1    Barrett, I.2    Pambid, M.R.3    Hu, K.4    Stratford, A.L.5    Freeman, S.6    Berquin, I.M.7    Pelech, S.8    Hieter, P.9    Maxwell, C.10
  • 59
    • 0037705425 scopus 로고    scopus 로고
    • Splicing factor SRp30c interaction with Y-box protein-1 confers nuclear YB-1 shuttling and alternative splice site selection
    • 10.1074/jbc.M212518200, 12604611
    • Raffetseder U, Frye B, Rauen T, Jurchott K, Royer HD, Jansen PL, Mertens PR. Splicing factor SRp30c interaction with Y-box protein-1 confers nuclear YB-1 shuttling and alternative splice site selection. J Biol Chem 2003, 278(20):18241-18248. 10.1074/jbc.M212518200, 12604611.
    • (2003) J Biol Chem , vol.278 , Issue.20 , pp. 18241-18248
    • Raffetseder, U.1    Frye, B.2    Rauen, T.3    Jurchott, K.4    Royer, H.D.5    Jansen, P.L.6    Mertens, P.R.7
  • 60
    • 33646394318 scopus 로고    scopus 로고
    • Disruption of the Y-box binding protein-1 results in suppression of the epidermal growth factor receptor and HER-2
    • 10.1158/0008-5472.CAN-05-3561, 16651443
    • Wu J, Lee C, Yokom D, Jiang H, Cheang MC, Yorida E, Turbin D, Berquin IM, Mertens PR, Iftner T, et al. Disruption of the Y-box binding protein-1 results in suppression of the epidermal growth factor receptor and HER-2. Cancer Res 2006, 66(9):4872-4879. 10.1158/0008-5472.CAN-05-3561, 16651443.
    • (2006) Cancer Res , vol.66 , Issue.9 , pp. 4872-4879
    • Wu, J.1    Lee, C.2    Yokom, D.3    Jiang, H.4    Cheang, M.C.5    Yorida, E.6    Turbin, D.7    Berquin, I.M.8    Mertens, P.R.9    Iftner, T.10
  • 61
    • 34250735674 scopus 로고    scopus 로고
    • RNA regulons: coordination of post-transcriptional events
    • 10.1038/nrg2111, 17572691
    • Keene JD. RNA regulons: coordination of post-transcriptional events. Nat Rev Genet 2007, 8(7):533-543. 10.1038/nrg2111, 17572691.
    • (2007) Nat Rev Genet , vol.8 , Issue.7 , pp. 533-543
    • Keene, J.D.1
  • 62
    • 82355191732 scopus 로고    scopus 로고
    • Expression of the tumor suppressor miR-206 is associated with cellular proliferative inhibition and impairs invasion in ERalpha-positive endometrioid adenocarcinoma
    • 10.1016/j.canlet.2011.09.014, 21983130
    • Chen X, Yan Q, Li S, Zhou L, Yang H, Yang Y, Liu X, Wan X. Expression of the tumor suppressor miR-206 is associated with cellular proliferative inhibition and impairs invasion in ERalpha-positive endometrioid adenocarcinoma. Cancer Lett 2012, 314(1):41-53. 10.1016/j.canlet.2011.09.014, 21983130.
    • (2012) Cancer Lett , vol.314 , Issue.1 , pp. 41-53
    • Chen, X.1    Yan, Q.2    Li, S.3    Zhou, L.4    Yang, H.5    Yang, Y.6    Liu, X.7    Wan, X.8
  • 63
    • 84862787132 scopus 로고    scopus 로고
    • MicroRNA-409-3p regulates cell proliferation and apoptosis by targeting PHF10 in gastric cancer
    • 10.1016/j.canlet.2012.02.030, 22388101
    • Li C, Nie H, Wang M, Su L, Li J, Yu B, Wei M, Ju J, Yu Y, Yan M, et al. MicroRNA-409-3p regulates cell proliferation and apoptosis by targeting PHF10 in gastric cancer. Cancer Lett 2012, 320(2):189-197. 10.1016/j.canlet.2012.02.030, 22388101.
    • (2012) Cancer Lett , vol.320 , Issue.2 , pp. 189-197
    • Li, C.1    Nie, H.2    Wang, M.3    Su, L.4    Li, J.5    Yu, B.6    Wei, M.7    Ju, J.8    Yu, Y.9    Yan, M.10
  • 64
    • 33644755496 scopus 로고    scopus 로고
    • A MAPK/HNRPK pathway controls BCR/ABL oncogenic potential by regulating MYC mRNA translation
    • 10.1182/blood-2005-09-3732, 1895740, 16293596
    • Notari M, Neviani P, Santhanam R, Blaser BW, Chang JS, Galietta A, Willis AE, Roy DC, Caligiuri MA, Marcucci G, et al. A MAPK/HNRPK pathway controls BCR/ABL oncogenic potential by regulating MYC mRNA translation. Blood 2006, 107(6):2507-2516. 10.1182/blood-2005-09-3732, 1895740, 16293596.
    • (2006) Blood , vol.107 , Issue.6 , pp. 2507-2516
    • Notari, M.1    Neviani, P.2    Santhanam, R.3    Blaser, B.W.4    Chang, J.S.5    Galietta, A.6    Willis, A.E.7    Roy, D.C.8    Caligiuri, M.A.9    Marcucci, G.10
  • 65
    • 34447115822 scopus 로고    scopus 로고
    • The multifunctional RNA-binding protein hnRNP A1 is required for processing of miR-18a
    • 10.1038/nsmb1250, 17558416
    • Guil S, Caceres JF. The multifunctional RNA-binding protein hnRNP A1 is required for processing of miR-18a. Nat Struct Mol Biol 2007, 14(7):591-596. 10.1038/nsmb1250, 17558416.
    • (2007) Nat Struct Mol Biol , vol.14 , Issue.7 , pp. 591-596
    • Guil, S.1    Caceres, J.F.2
  • 66
    • 77955425756 scopus 로고    scopus 로고
    • Antagonistic role of hnRNP A1 and KSRP in the regulation of let-7a biogenesis
    • 10.1038/nsmb.1874, 2923024, 20639884
    • Michlewski G, Caceres JF. Antagonistic role of hnRNP A1 and KSRP in the regulation of let-7a biogenesis. Nat Struct Mol Biol 2010, 17(8):1011-1018. 10.1038/nsmb.1874, 2923024, 20639884.
    • (2010) Nat Struct Mol Biol , vol.17 , Issue.8 , pp. 1011-1018
    • Michlewski, G.1    Caceres, J.F.2
  • 67
    • 77649133970 scopus 로고    scopus 로고
    • MiR-328 functions as an RNA decoy to modulate hnRNP E2 regulation of mRNA translation in leukemic blasts
    • 10.1016/j.cell.2010.01.007, 2924756, 20211135
    • Eiring AM, Harb JG, Neviani P, Garton C, Oaks JJ, Spizzo R, Liu S, Schwind S, Santhanam R, Hickey CJ, et al. miR-328 functions as an RNA decoy to modulate hnRNP E2 regulation of mRNA translation in leukemic blasts. Cell 2010, 140(5):652-665. 10.1016/j.cell.2010.01.007, 2924756, 20211135.
    • (2010) Cell , vol.140 , Issue.5 , pp. 652-665
    • Eiring, A.M.1    Harb, J.G.2    Neviani, P.3    Garton, C.4    Oaks, J.J.5    Spizzo, R.6    Liu, S.7    Schwind, S.8    Santhanam, R.9    Hickey, C.J.10
  • 68
    • 78649775595 scopus 로고    scopus 로고
    • Integrin-mediated function of Rab GTPases in cancer progression
    • 10.1186/1476-4598-9-312, 3003658, 21143914
    • Subramani D, Alahari SK. Integrin-mediated function of Rab GTPases in cancer progression. Mol Cancer 2010, 9:312. 10.1186/1476-4598-9-312, 3003658, 21143914.
    • (2010) Mol Cancer , vol.9 , pp. 312
    • Subramani, D.1    Alahari, S.K.2
  • 69
    • 71749100911 scopus 로고    scopus 로고
    • An integrated approach for experimental target identification of hypoxia-induced miR-210
    • 10.1074/jbc.M109.052779, 2787374, 19826008
    • Fasanaro P, Greco S, Lorenzi M, Pescatori M, Brioschi M, Kulshreshtha R, Banfi C, Stubbs A, Calin GA, Ivan M, et al. An integrated approach for experimental target identification of hypoxia-induced miR-210. J Biol Chem 2009, 284(50):35134-35143. 10.1074/jbc.M109.052779, 2787374, 19826008.
    • (2009) J Biol Chem , vol.284 , Issue.50 , pp. 35134-35143
    • Fasanaro, P.1    Greco, S.2    Lorenzi, M.3    Pescatori, M.4    Brioschi, M.5    Kulshreshtha, R.6    Banfi, C.7    Stubbs, A.8    Calin, G.A.9    Ivan, M.10
  • 70
    • 75849154284 scopus 로고    scopus 로고
    • HTqPCR: high-throughput analysis and visualization of quantitative real-time PCR data in R
    • 10.1093/bioinformatics/btp578, 2788924, 19808880
    • Dvinge H, Bertone P. HTqPCR: high-throughput analysis and visualization of quantitative real-time PCR data in R. Bioinformatics 2009, 25(24):3325-3326. 10.1093/bioinformatics/btp578, 2788924, 19808880.
    • (2009) Bioinformatics , vol.25 , Issue.24 , pp. 3325-3326
    • Dvinge, H.1    Bertone, P.2
  • 71
    • 49849101676 scopus 로고    scopus 로고
    • Transcriptional profiling of gene expression changes in a PACE-transfected CHO DUKX cell line secreting high levels of rhBMP-2
    • 10.1007/s12033-008-9039-6, 18240028
    • Doolan P, Melville M, Gammell P, Sinacore M, Meleady P, McCarthy K, Francullo L, Leonard M, Charlebois T, Clynes M. Transcriptional profiling of gene expression changes in a PACE-transfected CHO DUKX cell line secreting high levels of rhBMP-2. Mol Biotechnol 2008, 39(3):187-199. 10.1007/s12033-008-9039-6, 18240028.
    • (2008) Mol Biotechnol , vol.39 , Issue.3 , pp. 187-199
    • Doolan, P.1    Melville, M.2    Gammell, P.3    Sinacore, M.4    Meleady, P.5    McCarthy, K.6    Francullo, L.7    Leonard, M.8    Charlebois, T.9    Clynes, M.10
  • 74
    • 34447555632 scopus 로고    scopus 로고
    • A multivariate analysis approach to the integration of proteomic and gene expression data
    • 10.1002/pmic.200600898, 17549791
    • Fagan A, Culhane AC, Higgins DG. A multivariate analysis approach to the integration of proteomic and gene expression data. Proteomics 2007, 7(13):2162-2171. 10.1002/pmic.200600898, 17549791.
    • (2007) Proteomics , vol.7 , Issue.13 , pp. 2162-2171
    • Fagan, A.1    Culhane, A.C.2    Higgins, D.G.3
  • 76
    • 20744439107 scopus 로고    scopus 로고
    • MADE4: an R package for multivariate analysis of gene expression data
    • 10.1093/bioinformatics/bti394, 15797915
    • Culhane AC, Thioulouse J, Perriere G, Higgins DG. MADE4: an R package for multivariate analysis of gene expression data. Bioinformatics 2005, 21(11):2789-2790. 10.1093/bioinformatics/bti394, 15797915.
    • (2005) Bioinformatics , vol.21 , Issue.11 , pp. 2789-2790
    • Culhane, A.C.1    Thioulouse, J.2    Perriere, G.3    Higgins, D.G.4


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