메뉴 건너뛰기




Volumn 279, Issue 1749, 2012, Pages 5048-5057

Gene duplication as a mechanism of genomic adaptation to a changing environment

Author keywords

Environmental adaptation; Gene duplication; Genomics

Indexed keywords

ADAPTATION; ENVIRONMENTAL CUE; EVOLUTIONARY THEORY; GENOME; GENOMICS;

EID: 84869130037     PISSN: 09628452     EISSN: 14712954     Source Type: Journal    
DOI: 10.1098/rspb.2012.1108     Document Type: Review
Times cited : (482)

References (144)
  • 1
    • 0034634395 scopus 로고    scopus 로고
    • The evolutionary fate and consequences of duplicate genes
    • (doi:10.1126/science.290.5494.1151)
    • Lynch, M. & Conery, J. S. 2000 The evolutionary fate and consequences of duplicate genes. Science 290, 1151-1155. (doi:10.1126/science.290.5494.1151)
    • (2000) Science , vol.290 , pp. 1151-1155
    • Lynch, M.1    Conery, J.S.2
  • 2
    • 49949090861 scopus 로고    scopus 로고
    • The functional repertoires of metazoan genomes
    • (doi:10.1038/nrg2413)
    • Ponting, C. P. 2008 The functional repertoires of metazoan genomes. Nat. Rev. Genet. 9, 689-698. (doi:10.1038/nrg2413)
    • (2008) Nat. Rev. Genet. , vol.9 , pp. 689-698
    • Ponting, C.P.1
  • 3
    • 56549119570 scopus 로고    scopus 로고
    • Turning a hobby into a job: How duplicated genes find new functions
    • (doi:10.1038/nrg2482)
    • Conant, G. C. & Wolfe, K. H. 2008 Turning a hobby into a job: how duplicated genes find new functions. Nat. Rev. Genet. 9, 938-950. (doi:10.1038/nrg2482)
    • (2008) Nat. Rev. Genet. , vol.9 , pp. 938-950
    • Conant, G.C.1    Wolfe, K.H.2
  • 4
    • 0002339389 scopus 로고
    • Salivary chromosome maps
    • Bridges, C. A. 1935 Salivary chromosome maps. J. Hered. 26, 60-64.
    • (1935) J. Hered. , vol.26 , pp. 60-64
    • Bridges, C.A.1
  • 6
    • 79954672317 scopus 로고    scopus 로고
    • Genome structural variation discovery and genotyping
    • (doi:10.1038/nrg2958)
    • Alkan, C., Coe, B. P. & Eichler, E. E. 2011 Genome structural variation discovery and genotyping. Nat. Rev. Genet. 12, 363-376. (doi:10.1038/nrg2958)
    • (2011) Nat. Rev. Genet. , vol.12 , pp. 363-376
    • Alkan, C.1    Coe, B.P.2    Eichler, E.E.3
  • 7
    • 59849091566 scopus 로고    scopus 로고
    • The life and death of gene families
    • (doi:10.1002/bies. 080085)
    • Demuth, J. P. & Hahn, M.W. 2009 The life and death of gene families. Bioessays 31, 29-39. (doi:10.1002/bies. 080085)
    • (2009) Bioessays , vol.31 , pp. 29-39
    • Demuth, J.P.1    Hahn, M.W.2
  • 8
    • 0018757601 scopus 로고
    • Fixation of a deleterious allele at one of two 'duplicate' loci by mutation pressure and random drift
    • (doi:10.1073/pnas.76.6.2858)
    • Kimura, M. & King, J. L. 1979 Fixation of a deleterious allele at one of two 'duplicate' loci by mutation pressure and random drift. Proc. Natl Acad. Sci. USA 76, 2858-2861. (doi:10.1073/pnas.76.6.2858)
    • (1979) Proc. Natl Acad. Sci. USA , vol.76 , pp. 2858-2861
    • Kimura, M.1    King, J.L.2
  • 9
    • 0018953460 scopus 로고
    • Rate of gene silencing at duplicate loci: A theoretical study and interpretation of data from tetraploid fishes
    • Li, W. H. 1980 Rate of gene silencing at duplicate loci: a theoretical study and interpretation of data from tetraploid fishes. Genetics 95, 237-258.
    • (1980) Genetics , vol.95 , pp. 237-258
    • Li, W.H.1
  • 10
    • 0025377889 scopus 로고
    • How gene families evolve?
    • (doi:10.1016/0040-5809(90)90036-U)
    • Ohta, T. 1990How gene families evolve? Theor. Popul. Biol. 37, 213-219. (doi:10.1016/0040-5809(90)90036-U)
    • (1990) Theor. Popul. Biol. , vol.37 , pp. 213-219
    • Ohta, T.1
  • 11
    • 0028893838 scopus 로고
    • How often do duplicated genes evolve new functions?
    • Walsh, J. B. 1995 How often do duplicated genes evolve new functions? Genetics 139, 421-428.
    • (1995) Genetics , vol.139 , pp. 421-428
    • Walsh, J.B.1
  • 12
    • 0032191746 scopus 로고    scopus 로고
    • The fate of duplicated genes: Loss or new function?
    • (doi:10.1002/ (SICI)1521-1878(199810)20:10,785::AID-BIES2.3. 0.CO;2-M)
    • Wagner, A. 1998 The fate of duplicated genes: loss or new function? BioEssays 20, 785-788. (doi:10.1002/ (SICI)1521-1878(199810)20:10,785::AID-BIES2.3. 0.CO;2-M)
    • (1998) BioEssays , vol.20 , pp. 785-788
    • Wagner, A.1
  • 13
    • 0032770725 scopus 로고    scopus 로고
    • On the possibility of constructive neutral evolution
    • (doi:10. 1007/PL00006540)
    • Stoltzfus, A. 1999 On the possibility of constructive neutral evolution. J. Mol. Evol. 49, 169-181. (doi:10. 1007/PL00006540)
    • (1999) J. Mol. Evol. , vol.49 , pp. 169-181
    • Stoltzfus, A.1
  • 14
    • 0032893932 scopus 로고    scopus 로고
    • Preservation of duplicate genes by complementary, degenerative mutations
    • Force, A., Lynch, M., Pickett, F. B., Amores, A., Yan, Y. L. & Postlethwait, J. 1999 Preservation of duplicate genes by complementary, degenerative mutations. Genetics 151, 1531-1545.
    • (1999) Genetics , vol.151 , pp. 1531-1545
    • Force, A.1    Lynch, M.2    Pickett, F.B.3    Amores, A.4    Yan, Y.L.5    Postlethwait, J.6
  • 15
    • 0033972072 scopus 로고    scopus 로고
    • The probability of duplicate gene preservation by subfunctionalization
    • Lynch, M. & Force, A. 2000 The probability of duplicate gene preservation by subfunctionalization. Genetics 154, 459-473.
    • (2000) Genetics , vol.154 , pp. 459-473
    • Lynch, M.1    Force, A.2
  • 16
    • 0020121724 scopus 로고
    • Gene amplification in prokaryotic and eukaryotic systems
    • Velkov, V. V. 1982 Gene amplification in prokaryotic and eukaryotic systems. Genetika 18, 529-543.
    • (1982) Genetika , vol.18 , pp. 529-543
    • Velkov, V.V.1
  • 17
    • 0031468083 scopus 로고    scopus 로고
    • Gene amplification and genomic plasticity in prokaryotes
    • (doi:10.1146/annurev.genet.31.1.91)
    • Romero, D. & Palacios, R. 1997 Gene amplification and genomic plasticity in prokaryotes. Annu. Rev. Genet. 31, 91-111. (doi:10.1146/annurev.genet.31.1.91)
    • (1997) Annu. Rev. Genet. , vol.31 , pp. 91-111
    • Romero, D.1    Palacios, R.2
  • 18
    • 0345107239 scopus 로고    scopus 로고
    • Selection in the evolution of gene duplications
    • (doi:10.1186/gb-2002-3-2-research0008)
    • Kondrashov, F. A., Rogozin, I. B., Wolf, Y. I. & Koonin, E. V. 2002 Selection in the evolution of gene duplications. Genome Biol. 3, research0008. (doi:10.1186/gb-2002-3-2-research0008)
    • (2002) Genome Biol. , vol.3
    • Kondrashov, F.A.1    Rogozin, I.B.2    Wolf, Y.I.3    Koonin, E.V.4
  • 19
    • 33644621076 scopus 로고
    • Mnogokratnye linejnye povtoreniya uchastkov khromosom i ikh evolyucionnoe znachenie
    • [In Russian], Zh. Obshchej Biologii
    • Rapoport, I. A. 1940 Mnogokratnye linejnye povtoreniya uchastkov khromosom i ikh evolyucionnoe znachenie. [Multiple linear repeats of chromosome segments and their evolutionary significance]. Zh. Obshchej Biologii 1, 235-270. [In Russian]
    • (1940) Multiple linear repeats of chromosome segments and their evolutionary significance , vol.1 , pp. 235-270
    • Rapoport, I.A.1
  • 20
    • 3242808027 scopus 로고    scopus 로고
    • Large-scale copy number polymorphism in the human genome
    • (doi:10.1126/science.1098918)
    • Sebat, J. et al. 2004 Large-scale copy number polymorphism in the human genome. Science 305, 525-528. (doi:10.1126/science.1098918)
    • (2004) Science , vol.305 , pp. 525-528
    • Sebat, J.1
  • 21
    • 34547754092 scopus 로고    scopus 로고
    • Adaptive amplification
    • (doi:10.1080/1040 9230701507757)
    • Hastings, P. J. 2007 Adaptive amplification. Crit. Rev. Biochem. Mol. Biol. 42, 271-283. (doi:10.1080/1040 9230701507757)
    • (2007) Crit. Rev. Biochem. Mol. Biol. , vol.42 , pp. 271-283
    • Hastings, P.J.1
  • 22
    • 67650915748 scopus 로고    scopus 로고
    • Gene duplication and evolutionary novelty in plants
    • (doi:10.1111/j.1469-8137.2009.02923.x)
    • Flagel, L. E. & Wendel, J. F. 2009 Gene duplication and evolutionary novelty in plants. New Phytol. 183, 557-564. (doi:10.1111/j.1469-8137.2009.02923.x)
    • (2009) New Phytol. , vol.183 , pp. 557-564
    • Flagel, L.E.1    Wendel, J.F.2
  • 23
    • 65549117790 scopus 로고    scopus 로고
    • The varieties of gene amplification, diversification and hypervariability in the human malaria parasite, Plasmodium falciparum
    • (doi:10.1016/j.molbiopara. 2009.04.003)
    • Templeton, T. J. 2009 The varieties of gene amplification, diversification and hypervariability in the human malaria parasite, Plasmodium falciparum. Mol. Biochem. Parasitol. 166, 109-116. (doi:10.1016/j.molbiopara. 2009.04.003)
    • (2009) Mol. Biochem. Parasitol. , vol.166 , pp. 109-116
    • Templeton, T.J.1
  • 24
    • 77956940792 scopus 로고    scopus 로고
    • Plant secondary metabolism and challenges in modifying its operation: An overview
    • (doi:10.1007/978-1-60761-723-5-1)
    • Nascimento, N. C. & Fett-Neto, A. G. 2010 Plant secondary metabolism and challenges in modifying its operation: an overview. Methods Mol. Biol. 643, 1-13. (doi:10.1007/978-1-60761-723-5-1)
    • (2010) Methods Mol. Biol. , vol.643 , pp. 1-13
    • Nascimento, N.C.1    Fett-Neto, A.G.2
  • 25
    • 79960171704 scopus 로고    scopus 로고
    • Gene amplification and insecticide resistance
    • (doi:10.1002/ps.2189)
    • Bass, C. & Field, L. M. 2011 Gene amplification and insecticide resistance. Pest Manag. Sci. 67, 886-890. (doi:10.1002/ps.2189)
    • (2011) Pest Manag. Sci. , vol.67 , pp. 886-890
    • Bass, C.1    Field, L.M.2
  • 26
    • 84155181070 scopus 로고    scopus 로고
    • What have the mechanisms of resistance to glyphosate taught us?
    • (doi:10. 1002/ps.2261)
    • Shaner, D. L., Lindenmeyer, R. B. & Ostlie, M. H. 2012 What have the mechanisms of resistance to glyphosate taught us? Pest Manag. Sci. 68, 3-9. (doi:10. 1002/ps.2261)
    • (2012) Pest Manag. Sci. , vol.68 , pp. 3-9
    • Shaner, D.L.1    Lindenmeyer, R.B.2    Ostlie, M.H.3
  • 27
    • 70349325524 scopus 로고    scopus 로고
    • The evolutionary significance of ancient genome duplications
    • (doi:10.1038/nrg2600)
    • Van de Peer, Y., Maere, S. & Meyer, A. 2009 The evolutionary significance of ancient genome duplications. Nat. Rev. Genet. 10, 725-732. (doi:10.1038/nrg2600)
    • (2009) Nat. Rev. Genet. , vol.10 , pp. 725-732
    • Van de Peer, Y.1    Maere, S.2    Meyer, A.3
  • 28
    • 62549166268 scopus 로고    scopus 로고
    • Human genes involved in copy number variation: Mechanisms of origin, functional effects and implications for disease
    • (doi:10.1159/000184688)
    • de Smith, A. J., Walters, R. G., Froguel, P. & Blakemore, A. I. 2008 Human genes involved in copy number variation: mechanisms of origin, functional effects and implications for disease. Cytogenet. Genome Res. 123, 17-26. (doi:10.1159/000184688)
    • (2008) Cytogenet. Genome Res. , vol.123 , pp. 17-26
    • de Smith, A.J.1    Walters, R.G.2    Froguel, P.3    Blakemore, A.I.4
  • 29
    • 63149198301 scopus 로고    scopus 로고
    • Copy number variants, diseases and gene expression
    • (doi:10.1093/hmg/ddp011)
    • Henrichsen, C. N., Chaignat, E. & Reymond, A. 2009 Copy number variants, diseases and gene expression. Hum. Mol. Genet. 18, R1-R8. (doi:10.1093/hmg/ddp011)
    • (2009) Hum. Mol. Genet. , vol.18
    • Henrichsen, C.N.1    Chaignat, E.2    Reymond, A.3
  • 30
    • 70350221909 scopus 로고    scopus 로고
    • Copy number variation in human health, disease, and evolution
    • (doi:10.1146/annurev.genom.9.081307.164217)
    • Zhang, F., Gu, W., Hurles, M. E. & Lupski, J. R. 2009 Copy number variation in human health, disease, and evolution. Annu. Rev. Genomics Hum. Genet. 10, 451-481. (doi:10.1146/annurev.genom.9.081307.164217)
    • (2009) Annu. Rev. Genomics Hum. Genet. , vol.10 , pp. 451-481
    • Zhang, F.1    Gu, W.2    Hurles, M.E.3    Lupski, J.R.4
  • 31
    • 66049128566 scopus 로고    scopus 로고
    • Distinguishing among evolutionary models for the maintenance of gene duplicates
    • (doi:10.1093/jhered/esp047)
    • Hahn, M. W. 2009 Distinguishing among evolutionary models for the maintenance of gene duplicates. J. Hered. 100, 605-617. (doi:10.1093/jhered/esp047)
    • (2009) J. Hered. , vol.100 , pp. 605-617
    • Hahn, M.W.1
  • 32
    • 75549087305 scopus 로고    scopus 로고
    • The evolution of gene duplications: Classifying and distinguishing between models
    • (doi:10.1038/ nrg2689)
    • Innan, H. & Kondrashov, F. 2010 The evolution of gene duplications: classifying and distinguishing between models. Nat. Rev. Genet. 11, 97-108. (doi:10.1038/ nrg2689)
    • (2010) Nat. Rev. Genet. , vol.11 , pp. 97-108
    • Innan, H.1    Kondrashov, F.2
  • 33
    • 77949745690 scopus 로고    scopus 로고
    • Dosage sensitivity shapes the evolution of copynumber varied regions
    • (doi:10. 1371/journal.pone.0009474)
    • Schuster-Böckler, B., Conrad, D. & Bateman, A. 2010 Dosage sensitivity shapes the evolution of copynumber varied regions. PLoS ONE 5, e9474. (doi:10. 1371/journal.pone.0009474)
    • (2010) PLoS ONE , vol.5
    • Schuster-Böckler, B.1    Conrad, D.2    Bateman, A.3
  • 34
    • 33846978695 scopus 로고    scopus 로고
    • Relative impact of nucleotide and copy number variation on gene expression phenotypes
    • (doi:10.1126/science. 1136678)
    • Stranger, B. E. et al. 2007 Relative impact of nucleotide and copy number variation on gene expression phenotypes. Science 315, 848-853. (doi:10.1126/science. 1136678)
    • (2007) Science , vol.315 , pp. 848-853
    • Stranger, B.E.1
  • 35
    • 84856200354 scopus 로고    scopus 로고
    • Copy-number variation: The balance between gene dosage and expression in Drosophila melanogaster
    • (doi:10.1093/gbe/evr023)
    • Zhou, J., Lemos, B., Dopman, E. B. & Hartl, D. L. 2011 Copy-number variation: the balance between gene dosage and expression in Drosophila melanogaster. Genome Biol. Evol. 3, 1014-1024. (doi:10.1093/gbe/evr023)
    • (2011) Genome Biol. Evol. , vol.3 , pp. 1014-1024
    • Zhou, J.1    Lemos, B.2    Dopman, E.B.3    Hartl, D.L.4
  • 36
    • 33644629879 scopus 로고    scopus 로고
    • Role of selection in fixation of gene duplications
    • (doi:10.1016/j.jtbi.2005.08.033)
    • Kondrashov, F. A. & Kondrashov, A. S. 2006 Role of selection in fixation of gene duplications. J. Theor. Biol. 239, 141-151. (doi:10.1016/j.jtbi.2005.08.033)
    • (2006) J. Theor. Biol. , vol.239 , pp. 141-151
    • Kondrashov, F.A.1    Kondrashov, A.S.2
  • 37
    • 36849037818 scopus 로고    scopus 로고
    • An evolution revolution provides further revelation
    • (doi:10. 1002/bies.20686)
    • Lupski, J. R. 2007 An evolution revolution provides further revelation. Bioessays 29, 1182-1184. (doi:10. 1002/bies.20686)
    • (2007) Bioessays , vol.29 , pp. 1182-1184
    • Lupski, J.R.1
  • 38
    • 0347364640 scopus 로고    scopus 로고
    • The early stages of duplicate gene evolution
    • (doi:10.1073/pnas. 2535513100)
    • Moore, R. C. & Purugganan, M. D. 2003 The early stages of duplicate gene evolution. Proc. Natl Acad. Sci. USA 100, 15 682-15 687. (doi:10.1073/pnas. 2535513100)
    • (2003) Proc. Natl Acad. Sci. USA , vol.100
    • Moore, R.C.1    Purugganan, M.D.2
  • 39
    • 0026428610 scopus 로고
    • Adaptive protein evolution at the Adh locus in Drosophila
    • (doi:10.1038/351652a0)
    • McDonald, J. H. & Kreitman, M. 1991 Adaptive protein evolution at the Adh locus in Drosophila. Nature 351, 652-654. (doi:10.1038/351652a0)
    • (1991) Nature , vol.351 , pp. 652-654
    • McDonald, J.H.1    Kreitman, M.2
  • 40
    • 1842526843 scopus 로고    scopus 로고
    • Implications of human genome architecture for rearrangement-based disorders: The genomic basis of disease
    • (doi:10.1093/hmg/ddh073)
    • Shaw, C. J. & Lupski, J. R. 2004 Implications of human genome architecture for rearrangement-based disorders: the genomic basis of disease. Hum. Mol. Genet. 13, R57-R64. (doi:10.1093/hmg/ddh073)
    • (2004) Hum. Mol. Genet. , vol.13
    • Shaw, C.J.1    Lupski, J.R.2
  • 41
    • 0031904230 scopus 로고    scopus 로고
    • Multiple duplications of yeast hexose transport genes in response to selection in a glucose-limited environment
    • (doi:10.1093/ oxfordjournals.molbev.a026009)
    • Brown, C. J., Todd, K. M. & Rosenzweig, R. F. 1998 Multiple duplications of yeast hexose transport genes in response to selection in a glucose-limited environment. Mol. Biol. Evol. 15, 931-942. (doi:10.1093/ oxfordjournals.molbev.a026009)
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 931-942
    • Brown, C.J.1    Todd, K.M.2    Rosenzweig, R.F.3
  • 42
    • 78650488831 scopus 로고    scopus 로고
    • Expansion of hexose transporter genes was associated with the evolution of aerobic fermentation in yeasts
    • (doi:10.1093/molbev/msq184)
    • Lin, Z. & Li, W. H. 2011 Expansion of hexose transporter genes was associated with the evolution of aerobic fermentation in yeasts. Mol. Biol. Evol. 28, 131-142. (doi:10.1093/molbev/msq184)
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 131-142
    • Lin, Z.1    Li, W.H.2
  • 43
    • 58149166731 scopus 로고    scopus 로고
    • The repertoire and dynamics of evolutionary adaptations to controlled nutrient-limited environments in yeast
    • (doi:10.1371/journal.pgen.1000303)
    • Gresham, D., Desai, M. M., Tucker, C. M., Jenq, H. T., Pai, D. A., Ward, A., DeSevo, C. G., Botstein, D. & Dunham, M. J. 2008 The repertoire and dynamics of evolutionary adaptations to controlled nutrient-limited environments in yeast. PLoS Genet. 4, e1000303. (doi:10.1371/journal.pgen.1000303)
    • (2008) PLoS Genet. , vol.4
    • Gresham, D.1    Desai, M.M.2    Tucker, C.M.3    Jenq, H.T.4    Pai, D.A.5    Ward, A.6    DeSevo, C.G.7    Botstein, D.8    Dunham, M.J.9
  • 44
    • 0035895278 scopus 로고    scopus 로고
    • Genetic architecture of thermal adaptation in Escherichia coli
    • (doi:10. 1073/pnas.98.2.525)
    • Riehle, M. M., Bennett, A. F. & Long, A. D. 2001 Genetic architecture of thermal adaptation in Escherichia coli. Proc. Natl Acad. Sci. USA 98, 525-530. (doi:10. 1073/pnas.98.2.525)
    • (2001) Proc. Natl Acad. Sci. USA , vol.98 , pp. 525-530
    • Riehle, M.M.1    Bennett, A.F.2    Long, A.D.3
  • 45
    • 39749104182 scopus 로고    scopus 로고
    • Engineering Escherichia coli heat-resistance by synthetic gene amplification
    • (doi:10.1093/ protein/gzm085)
    • Christ, D. & Chin, J. W. 2008 Engineering Escherichia coli heat-resistance by synthetic gene amplification. Protein Eng. Des. Sel. 21, 121-125. (doi:10.1093/ protein/gzm085)
    • (2008) Protein Eng. Des. Sel. , vol.21 , pp. 121-125
    • Christ, D.1    Chin, J.W.2
  • 46
    • 39649104571 scopus 로고    scopus 로고
    • Lager yeasts possess dynamic genomes that undergo rearrangements and gene amplification in response to stress
    • (doi:10.1007/ s00294-007-0172-8)
    • James, T. C., Usher, J., Campbell, S. & Bond, U. 2008 Lager yeasts possess dynamic genomes that undergo rearrangements and gene amplification in response to stress. Curr. Genet. 53, 139-152. (doi:10.1007/ s00294-007-0172-8)
    • (2008) Curr. Genet. , vol.53 , pp. 139-152
    • James, T.C.1    Usher, J.2    Campbell, S.3    Bond, U.4
  • 47
    • 77958462555 scopus 로고    scopus 로고
    • Copy number variation shapes genome diversity in Arabidopsis over immediate family generational scales
    • (doi:10. 1093/gbe/evq033)
    • DeBolt, S. 2010 Copy number variation shapes genome diversity in Arabidopsis over immediate family generational scales. Genome Biol. Evol. 2, 441-453. (doi:10. 1093/gbe/evq033)
    • (2010) Genome Biol. Evol. , vol.2 , pp. 441-453
    • DeBolt, S.1
  • 48
    • 0030970280 scopus 로고    scopus 로고
    • Evolution of antifreeze glycoprotein gene from a trypsinogen gene in Antarctic notothenioid fish
    • (doi:10.1073/pnas.94.8.3811)
    • Chen, L., DeVries, A. L. & Cheng, C. H. 1997 Evolution of antifreeze glycoprotein gene from a trypsinogen gene in Antarctic notothenioid fish. Proc. Natl Acad. Sci. USA 94, 3811-3816. (doi:10.1073/pnas.94.8.3811)
    • (1997) Proc. Natl Acad. Sci. USA , vol.94 , pp. 3811-3816
    • Chen, L.1    DeVries, A.L.2    Cheng, C.H.3
  • 49
    • 51349160670 scopus 로고    scopus 로고
    • Transcriptomic and genomic evolution under constant cold in Antarctic notothenioid fish
    • (doi:10.1073/pnas.0802432105)
    • Chen, Z. et al. 2008 Transcriptomic and genomic evolution under constant cold in Antarctic notothenioid fish. Proc. Natl Acad. Sci. USA 105, 12 944-12 949. (doi:10.1073/pnas.0802432105)
    • (2008) Proc. Natl Acad. Sci. USA , vol.105
    • Chen, Z.1
  • 50
    • 0038157152 scopus 로고    scopus 로고
    • Dosage sensitivity and the evolution of gene families in yeast
    • (doi:10.1038/nature01771)
    • Papp, B., Pal, C. & Hurst, L. D. 2003 Dosage sensitivity and the evolution of gene families in yeast. Nature 424, 194-197. (doi:10.1038/nature01771)
    • (2003) Nature , vol.424 , pp. 194-197
    • Papp, B.1    Pal, C.2    Hurst, L.D.3
  • 51
    • 33750476346 scopus 로고    scopus 로고
    • Amplification of histone genes by circular chromosome formation in Saccharomyces cerevisiae
    • (doi:10.1038/nature05205)
    • Libuda, D. E. & Winston, F. 2006 Amplification of histone genes by circular chromosome formation in Saccharomyces cerevisiae. Nature 443, 1003-1007. (doi:10.1038/nature05205)
    • (2006) Nature , vol.443 , pp. 1003-1007
    • Libuda, D.E.1    Winston, F.2
  • 52
    • 78651088019 scopus 로고    scopus 로고
    • Escape from growth restriction in small colony variants of Salmonella typhimurium by gene amplification and mutation
    • (doi:10.1111/j.1365-2958. 2010.07458.x)
    • Pranting, M. & Andersson, D. I. 2011 Escape from growth restriction in small colony variants of Salmonella typhimurium by gene amplification and mutation. Mol. Microbiol. 79, 305-315. (doi:10.1111/j.1365-2958. 2010.07458.x)
    • (2011) Mol. Microbiol. , vol.79 , pp. 305-315
    • Pranting, M.1    Andersson, D.I.2
  • 53
    • 77956637258 scopus 로고    scopus 로고
    • Amplification of the gene for isoleucyl-tRNA synthetase facilitates adaptation to the fitness cost of mupirocin resistance in Salmonella enterica
    • (doi:10.1534/genetics.109.113514)
    • Paulander, W., Andersson, D. I. & Maisnier-Patin, S. 2010 Amplification of the gene for isoleucyl-tRNA synthetase facilitates adaptation to the fitness cost of mupirocin resistance in Salmonella enterica. Genetics 185, 305-312. (doi:10.1534/genetics.109.113514)
    • (2010) Genetics , vol.185 , pp. 305-312
    • Paulander, W.1    Andersson, D.I.2    Maisnier-Patin, S.3
  • 54
    • 79955027266 scopus 로고    scopus 로고
    • Adaptation of Saccharomyces cerevisiae to saline stress through laboratory evolution
    • (doi:10.1111/j.1420-9101.2011.02249.x)
    • Dhar, R., Sagesser, R., Weikert, C., Yuan, J. &Wagner, A. 2011 Adaptation of Saccharomyces cerevisiae to saline stress through laboratory evolution. J. Evol. Biol. 24, 1135-1153. (doi:10.1111/j.1420-9101.2011.02249.x)
    • (2011) J. Evol. Biol. , vol.24 , pp. 1135-1153
    • Dhar, R.1    Sagesser, R.2    Weikert, C.3    Yuan, J.4    Wagner, A.5
  • 55
    • 33749420389 scopus 로고    scopus 로고
    • Genomic convergence toward diploidy in Saccharomyces cerevisiae
    • (doi:10.1371/journal. pgen.0020145)
    • Gerstein, A. C., Chun, H. J., Grant, A. & Otto, S. P. 2006 Genomic convergence toward diploidy in Saccharomyces cerevisiae. PLoS Genet. 2, e145. (doi:10.1371/journal. pgen.0020145)
    • (2006) PLoS Genet. , vol.2
    • Gerstein, A.C.1    Chun, H.J.2    Grant, A.3    Otto, S.P.4
  • 56
    • 49649097629 scopus 로고    scopus 로고
    • Tetraploid citrus rootstocks are more tolerant to salt stress than diploid
    • (doi:10.1016/j.crvi.2008.06.007)
    • Saleh, B., Allario, T., Dambier, D., Ollitrault, P. & Morillon, R. 2008 Tetraploid citrus rootstocks are more tolerant to salt stress than diploid. C. R. Biol. 331, 703-710. (doi:10.1016/j.crvi.2008.06.007)
    • (2008) C. R. Biol. , vol.331 , pp. 703-710
    • Saleh, B.1    Allario, T.2    Dambier, D.3    Ollitrault, P.4    Morillon, R.5
  • 57
    • 33744470096 scopus 로고    scopus 로고
    • Chromosome endoreduplication as a factor of salt adaptation in Sorghum bicolor
    • (doi:10. 1007/s00709-005-0144-0)
    • Ceccarelli, M., Santantonio, E., Marmottini, F., Amzallag, G. N. & Cionini, P. G. 2006 Chromosome endoreduplication as a factor of salt adaptation in Sorghum bicolor. Protoplasma 227, 113-118. (doi:10. 1007/s00709-005-0144-0)
    • (2006) Protoplasma , vol.227 , pp. 113-118
    • Ceccarelli, M.1    Santantonio, E.2    Marmottini, F.3    Amzallag, G.N.4    Cionini, P.G.5
  • 58
    • 77953719270 scopus 로고    scopus 로고
    • Biosequestration via cooperative binding of copper by Ralstonia pickettii
    • (doi:10.1080/09593330.2010.487290)
    • Yang, F., Pecina, D. A., Kelly, S. D., Kim, S. H., Kemner, K. M., Long, D. T. & Marsh, T. L. 2010 Biosequestration via cooperative binding of copper by Ralstonia pickettii. Environ. Technol. 31, 1045-1060. (doi:10.1080/09593330.2010.487290)
    • (2010) Environ. Technol. , vol.31 , pp. 1045-1060
    • Yang, F.1    Pecina, D.A.2    Kelly, S.D.3    Kim, S.H.4    Kemner, K.M.5    Long, D.T.6    Marsh, T.L.7
  • 59
    • 68449097696 scopus 로고    scopus 로고
    • Cupriavidus metallidurans: Evolution of a metal-resistant bacterium
    • (doi:10.1007/ s10482-008-9284-5)
    • von Rozycki, T. & Nies, D. H. 2009 Cupriavidus metallidurans: evolution of a metal-resistant bacterium. Antonie Van Leeuwenhoek 96, 115-139. (doi:10.1007/ s10482-008-9284-5)
    • (2009) Antonie Van Leeuwenhoek , vol.96 , pp. 115-139
    • von Rozycki, T.1    Nies, D.H.2
  • 60
    • 84864642785 scopus 로고    scopus 로고
    • Microevolution of Cryptococcus neoformans driven by massive tandem gene amplification
    • (doi:10.1093/ molbev/mss066)
    • Chow, E. W., Morrow, C. A., Djordjevic, J. T., Wood, I. A. & Fraser, J. A. 2012 Microevolution of Cryptococcus neoformans driven by massive tandem gene amplification. Mol. Biol. Evol. 29, 1987-2000. (doi:10.1093/ molbev/mss066)
    • (2012) Mol. Biol. Evol. , vol.29 , pp. 1987-2000
    • Chow, E.W.1    Morrow, C.A.2    Djordjevic, J.T.3    Wood, I.A.4    Fraser, J.A.5
  • 61
    • 34547547951 scopus 로고    scopus 로고
    • Double trouble: Medical implications of genetic duplication and amplification in bacteria
    • (doi:10.2217/17460913.2.3.309)
    • Craven, S. H. & Neidle, E. L. 2007 Double trouble: medical implications of genetic duplication and amplification in bacteria. Future Microbiol. 2, 309-321. (doi:10.2217/17460913.2.3.309)
    • (2007) Future Microbiol. , vol.2 , pp. 309-321
    • Craven, S.H.1    Neidle, E.L.2
  • 62
    • 67651204792 scopus 로고    scopus 로고
    • Bacterial gene amplification: Implications for the evolution of antibiotic resistance
    • (doi:10.1038/nrmicro2174)
    • Sandegren, L. & Andersson, D. I. 2009 Bacterial gene amplification: implications for the evolution of antibiotic resistance. Nat. Rev. Microbiol. 7, 578-588. (doi:10.1038/nrmicro2174)
    • (2009) Nat. Rev. Microbiol. , vol.7 , pp. 578-588
    • Sandegren, L.1    Andersson, D.I.2
  • 63
    • 0028275289 scopus 로고
    • Leishmania gene amplification: A mechanism of drug resistance
    • Segovia, M. 1994 Leishmania gene amplification: a mechanism of drug resistance. Ann. Trop. Med. Parasitol. 88, 123-130.
    • (1994) Ann. Trop. Med. Parasitol. , vol.88 , pp. 123-130
    • Segovia, M.1
  • 64
    • 0024338609 scopus 로고
    • Amplification of the multidrug resistance gene in some chloroquine-resistant isolates of P falciparum
    • (doi:10.1016/0092-8674(89)90330-9)
    • Foote, S. J., Thompson, J. K., Cowman, A. F. & Kemp, D. J. 1989 Amplification of the multidrug resistance gene in some chloroquine-resistant isolates of P. falciparum. Cell 57, 921-930. (doi:10.1016/0092-8674(89)90330-9)
    • (1989) Cell , vol.57 , pp. 921-930
    • Foote, S.J.1    Thompson, J.K.2    Cowman, A.F.3    Kemp, D.J.4
  • 65
    • 0025269612 scopus 로고
    • Several alleles of the multidrug-resistance gene are closely linked to chloroquine resistance in Plasmodium falciparum
    • (doi:10.1038/345255a0)
    • Foote, S. J., Kyle, D. E., Martin, R. K., Oduola, A. M., Forsyth, K., Kemp, D. J. & Cowman, A. F. 1990 Several alleles of the multidrug-resistance gene are closely linked to chloroquine resistance in Plasmodium falciparum. Nature 345, 255-258. (doi:10.1038/345255a0)
    • (1990) Nature , vol.345 , pp. 255-258
    • Foote, S.J.1    Kyle, D.E.2    Martin, R.K.3    Oduola, A.M.4    Forsyth, K.5    Kemp, D.J.6    Cowman, A.F.7
  • 66
    • 19344377032 scopus 로고    scopus 로고
    • Contribution of the pfmdr1 gene to antimalarial drug-resistance
    • (doi:10.1016/j.actatropica.2005. 04.008)
    • Duraisingh, M. T. & Cowman, A. F. 2005 Contribution of the pfmdr1 gene to antimalarial drug-resistance. Acta Trop. 94, 181-190. (doi:10.1016/j.actatropica.2005. 04.008)
    • (2005) Acta Trop. , vol.94 , pp. 181-190
    • Duraisingh, M.T.1    Cowman, A.F.2
  • 68
    • 77952664258 scopus 로고    scopus 로고
    • Role of pfmdr1 amplification and expression in induction of resistance to artemisinin derivatives in Plasmodium falciparum
    • (doi:10.1128/AAC.00947-09)
    • Chavchich, M., Gerena, L., Peters, J., Chen, N., Cheng, Q. & Kyle, D. E. 2010 Role of pfmdr1 amplification and expression in induction of resistance to artemisinin derivatives in Plasmodium falciparum. Antimicrob. Agents Chemother. 54, 2455-2464. (doi:10.1128/AAC.00947-09)
    • (2010) Antimicrob. Agents Chemother. , vol.54 , pp. 2455-2464
    • Chavchich, M.1    Gerena, L.2    Peters, J.3    Chen, N.4    Cheng, Q.5    Kyle, D.E.6
  • 69
    • 0026048108 scopus 로고
    • Amplification of the multidrug resistance gene pfmdr1 in Plasmodium falciparum has arisen as multiple independent events
    • Triglia, T., Foote, S. J., Kemp, D. J. & Cowman, A. F. 1991 Amplification of the multidrug resistance gene pfmdr1 in Plasmodium falciparum has arisen as multiple independent events. Mol. Cell. Biol. 11, 5244-5250.
    • (1991) Mol. Cell. Biol. , vol.11 , pp. 5244-5250
    • Triglia, T.1    Foote, S.J.2    Kemp, D.J.3    Cowman, A.F.4
  • 70
    • 80054715589 scopus 로고    scopus 로고
    • Increased pfmdr1 copy number and sequence polymorphisms in Plasmodium falciparum isolates from Sudanese malaria patients treated with artemether-lumefantrine
    • (doi:10.1128/AAC. 05102-11)
    • Gadalla, N. B. et al. 2011 Increased pfmdr1 copy number and sequence polymorphisms in Plasmodium falciparum isolates from Sudanese malaria patients treated with artemether-lumefantrine. Antimicrob. Agents Chemother. 55, 5408-5411. (doi:10.1128/AAC. 05102-11)
    • (2011) Antimicrob. Agents Chemother. , vol.55 , pp. 5408-5411
    • Gadalla, N.B.1
  • 71
    • 46249096629 scopus 로고    scopus 로고
    • Gene amplification of the multidrug resistance 1 gene of Plasmodium vivax isolates from Thailand, Laos, and Myanmar
    • (doi:10.1128/AAC.01459-07)
    • Imwong, M. et al. 2008 Gene amplification of the multidrug resistance 1 gene of Plasmodium vivax isolates from Thailand, Laos, and Myanmar. Antimicrob. Agents Chemother. 52, 2657-2659. (doi:10.1128/AAC.01459-07)
    • (2008) Antimicrob. Agents Chemother. , vol.52 , pp. 2657-2659
    • Imwong, M.1
  • 73
    • 77950146604 scopus 로고    scopus 로고
    • pfmdr1 amplification and fixation of pfcrt chloroquine resistance alleles in Plasmodium falciparum in Venezuela
    • (doi:10.1128/AAC.01243-09)
    • Griffing, S. et al. 2010 pfmdr1 amplification and fixation of pfcrt chloroquine resistance alleles in Plasmodium falciparum in Venezuela. Antimicrob. Agents Chemother. 54, 1572-1579. (doi:10.1128/AAC.01243-09)
    • (2010) Antimicrob. Agents Chemother. , vol.54 , pp. 1572-1579
    • Griffing, S.1
  • 74
    • 33846833887 scopus 로고    scopus 로고
    • Recurrent gene amplification and soft selective sweeps during evolution of multidrug resistance in malaria parasites
    • (doi:10.1093/molbev/msl185)
    • Nair, S., Nash, D., Sudimack, D., Jaidee, A., Barends, M., Uhlemann, A. C., Krishna, S., Nosten, F. & Anderson, T. J. 2007 Recurrent gene amplification and soft selective sweeps during evolution of multidrug resistance in malaria parasites. Mol. Biol. Evol. 24, 562-573. (doi:10.1093/molbev/msl185)
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 562-573
    • Nair, S.1    Nash, D.2    Sudimack, D.3    Jaidee, A.4    Barends, M.5    Uhlemann, A.C.6    Krishna, S.7    Nosten, F.8    Anderson, T.J.9
  • 75
    • 55449133690 scopus 로고    scopus 로고
    • Adaptive copy number evolution in malaria parasites
    • (doi:10. 1371/journal.pgen.1000243)
    • Nair, S. et al. 2008 Adaptive copy number evolution in malaria parasites. PLoS Genet. 4, e1000243. (doi:10. 1371/journal.pgen.1000243)
    • (2008) PLoS Genet. , vol.4
    • Nair, S.1
  • 76
    • 49049118494 scopus 로고    scopus 로고
    • Modulation of gene expression in drug resistant Leishmania is associated with gene amplification, gene deletion and chromosome aneuploidy
    • (doi:10.1186/gb-2008-9-7-r115)
    • Ubeda, J. M. et al. 2008 Modulation of gene expression in drug resistant Leishmania is associated with gene amplification, gene deletion and chromosome aneuploidy. Genome Biol. 9, R115. (doi:10.1186/gb-2008-9-7-r115)
    • (2008) Genome Biol. , vol.9
    • Ubeda, J.M.1
  • 77
    • 80052492787 scopus 로고    scopus 로고
    • Frequency of drug resistance gene amplification in clinical Leishmania strains
    • (doi:10.1155/ 2010/819060)
    • Mary, C., Faraut, F., Deniau, M., Dereure, J., Aoun, K., Ranque, S. & Piarroux, R. 2010 Frequency of drug resistance gene amplification in clinical Leishmania strains. Int. J. Microbiol. 2010, 819060. (doi:10.1155/ 2010/819060)
    • (2010) Int. J. Microbiol. , vol.2010 , pp. 819060
    • Mary, C.1    Faraut, F.2    Deniau, M.3    Dereure, J.4    Aoun, K.5    Ranque, S.6    Piarroux, R.7
  • 78
    • 79952166228 scopus 로고    scopus 로고
    • Artificial gene amplification reveals an abundance of promiscuous resistance determinants in Escherichia coli
    • (doi:10. 1073/pnas.1012108108)
    • Soo, V. W., Hanson-Manful, P. & Patrick, W. M. 2011 Artificial gene amplification reveals an abundance of promiscuous resistance determinants in Escherichia coli. Proc. Natl Acad. Sci. USA 108, 1484-1489. (doi:10. 1073/pnas.1012108108)
    • (2011) Proc. Natl Acad. Sci. USA , vol.108 , pp. 1484-1489
    • Soo, V.W.1    Hanson-Manful, P.2    Patrick, W.M.3
  • 79
    • 0029944227 scopus 로고    scopus 로고
    • Molecular biology and evolution of resistance of toxicants
    • (doi:10.1093/oxfordjournals.molbev.a025633)
    • Taylor, M. & Feyereisen, R. 1996 Molecular biology and evolution of resistance of toxicants. Mol. Biol. Evol. 13, 719-734. (doi:10.1093/oxfordjournals.molbev.a025633)
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 719-734
    • Taylor, M.1    Feyereisen, R.2
  • 80
    • 0032411022 scopus 로고    scopus 로고
    • Appearance and sweep of a gene duplication: Adaptive response and potential for new functions in the mosquito Culex pipiens
    • (doi:10.2307/2411343)
    • Lenormand, T., Guillemaud, T., Bourguet, D. & Raymond, M. 1998 Appearance and sweep of a gene duplication: adaptive response and potential for new functions in the mosquito Culex pipiens. Evolution 52, 1705-1712. (doi:10.2307/2411343)
    • (1998) Evolution , vol.52 , pp. 1705-1712
    • Lenormand, T.1    Guillemaud, T.2    Bourguet, D.3    Raymond, M.4
  • 81
    • 37349088131 scopus 로고    scopus 로고
    • Forty years of erratic insecticide resistance evolution in the mosquito Culex pipiens
    • (doi:10. 1371/journal.pgen.0030205)
    • Labbe, P., Berticat, C., Berthomieu, A., Unal, S., Bernard, C., Weill, M. & Lenormand, T. 2007 Forty years of erratic insecticide resistance evolution in the mosquito Culex pipiens. PLoS Genet. 3, e205. (doi:10. 1371/journal.pgen.0030205)
    • (2007) PLoS Genet. , vol.3
    • Labbe, P.1    Berticat, C.2    Berthomieu, A.3    Unal, S.4    Bernard, C.5    Weill, M.6    Lenormand, T.7
  • 82
    • 34047197339 scopus 로고    scopus 로고
    • Independent duplications of the acetylcholinesterase gene conferring insecticide resistance in the mosquito Culex pipiens
    • (doi:10.1093/ molbev/msm025)
    • Labbe, P., Berthomieu, A., Berticat, C., Alout, H., Raymond, M., Lenormand, T. & Weill, M. 2007 Independent duplications of the acetylcholinesterase gene conferring insecticide resistance in the mosquito Culex pipiens. Mol. Biol. Evol. 24, 1056-1067. (doi:10.1093/ molbev/msm025)
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1056-1067
    • Labbe, P.1    Berthomieu, A.2    Berticat, C.3    Alout, H.4    Raymond, M.5    Lenormand, T.6    Weill, M.7
  • 83
    • 78651231131 scopus 로고    scopus 로고
    • High incidence of ace-1 duplicated haplotypes in resistant Culex pipiens mosquitoes from Algeria
    • (doi:10.1016/j.ibmb.2010.09.009)
    • Alout, H., Labbe, P., Pasteur, N. & Weill, M. 2011 High incidence of ace-1 duplicated haplotypes in resistant Culex pipiens mosquitoes from Algeria. Insect Biochem. Mol. Biol. 41, 29-35. (doi:10.1016/j.ibmb.2010.09.009)
    • (2011) Insect Biochem. Mol. Biol. , vol.41 , pp. 29-35
    • Alout, H.1    Labbe, P.2    Pasteur, N.3    Weill, M.4
  • 84
    • 33749037127 scopus 로고    scopus 로고
    • Genomic organization and evolution of the ULBP genes in cattle
    • (doi:10.1186/1471-2164-7-227)
    • Larson, J. H., Marron, B. M., Beever, J. E., Roe, B. A. & Lewin, H. A. 2006 Genomic organization and evolution of the ULBP genes in cattle. BMC Genomics 7, 227. (doi:10.1186/1471-2164-7-227)
    • (2006) BMC Genomics , vol.7 , pp. 227
    • Larson, J.H.1    Marron, B.M.2    Beever, J.E.3    Roe, B.A.4    Lewin, H.A.5
  • 85
    • 84859535421 scopus 로고    scopus 로고
    • Copy number variation of individual cattle genomes using next-generation sequencing
    • (doi:10.1101/gr.133967.111)
    • Bickhart, D.M. et al. 2012 Copy number variation of individual cattle genomes using next-generation sequencing. Genome Res. 22, 778-790. (doi:10.1101/gr.133967.111)
    • (2012) Genome Res. , vol.22 , pp. 778-790
    • Bickhart, D.M.1
  • 87
    • 20044377204 scopus 로고    scopus 로고
    • The influence of CCL3L1 gene-containing segmental duplications on HIV-1/ AIDS susceptibility
    • (doi:10. 1126/science.1101160)
    • Gonzalez, E. et al. 2005 The influence of CCL3L1 gene-containing segmental duplications on HIV-1/ AIDS susceptibility. Science 307, 1434-1440. (doi:10. 1126/science.1101160)
    • (2005) Science , vol.307 , pp. 1434-1440
    • Gonzalez, E.1
  • 88
    • 34748895999 scopus 로고    scopus 로고
    • Diet and the evolution of human amylase gene copy number variation
    • (doi:10.1038/ng2123)
    • Perry, G. H. et al. 2007 Diet and the evolution of human amylase gene copy number variation. Nat. Genet. 39, 1256-1260. (doi:10.1038/ng2123)
    • (2007) Nat. Genet. , vol.39 , pp. 1256-1260
    • Perry, G.H.1
  • 89
    • 34347354302 scopus 로고    scopus 로고
    • Mutational and selective effects on copy-number variants in the human genome
    • (doi:10.1038/ng2054)
    • Cooper, G. M., Nickerson, D. A. & Eichler, E. E. 2007 Mutational and selective effects on copy-number variants in the human genome. Nat. Genet. 39, S22-S29. (doi:10.1038/ng2054)
    • (2007) Nat. Genet. , vol.39
    • Cooper, G.M.1    Nickerson, D.A.2    Eichler, E.E.3
  • 90
    • 46249105777 scopus 로고    scopus 로고
    • Natural selection shapes genome-wide patterns of copy-number polymorphism in Drosophila melanogaster
    • (doi:10.1126/ science.1158078)
    • Emerson, J. J., Cardoso-Moreira, M., Borevitz, J. O. & Long, M. 2008 Natural selection shapes genome-wide patterns of copy-number polymorphism in Drosophila melanogaster. Science 320, 1629-1631. (doi:10.1126/ science.1158078)
    • (2008) Science , vol.320 , pp. 1629-1631
    • Emerson, J.J.1    Cardoso-Moreira, M.2    Borevitz, J.O.3    Long, M.4
  • 91
    • 80053542924 scopus 로고    scopus 로고
    • Copy number variation analysis in the great apes reveals species-specific patterns of structural variation
    • (doi:10.1101/gr.117242.110)
    • Gazave, E. et al. 2011 Copy number variation analysis in the great apes reveals species-specific patterns of structural variation. Genome Res. 21, 1626-1639. (doi:10.1101/gr.117242.110)
    • (2011) Genome Res. , vol.21 , pp. 1626-1639
    • Gazave, E.1
  • 92
    • 0034703711 scopus 로고    scopus 로고
    • Adaptive amplification: An inducible chromosomal instability mechanism
    • (doi:10.1016/ S0092-8674(00)00176-8)
    • Hastings, P. J., Bull, H. J., Klump, J.R. &Rosenberg, S.M. 2000 Adaptive amplification: an inducible chromosomal instability mechanism. Cell 103, 723-731. (doi:10.1016/ S0092-8674(00)00176-8)
    • (2000) Cell , vol.103 , pp. 723-731
    • Hastings, P.J.1    Bull, H.J.2    Klump, J.R.3    Rosenberg, S.M.4
  • 93
    • 4143069266 scopus 로고    scopus 로고
    • Evolutionary genomics of ecological specialization
    • (doi:10.1073/pnas.040439 7101)
    • Zhong, S., Khodursky, A., Dykhuizen, D. E. & Dean, A. M. 2004 Evolutionary genomics of ecological specialization. Proc. Natl Acad. Sci. USA 101, 11 719-11 724. (doi:10.1073/pnas.040439 7101)
    • (2004) Proc. Natl Acad. Sci. USA , vol.101
    • Zhong, S.1    Khodursky, A.2    Dykhuizen, D.E.3    Dean, A.M.4
  • 94
    • 80052330521 scopus 로고    scopus 로고
    • Global chromosomal structural instability in a subpopulation of starving Escherichia coli cells
    • (doi:10.1371/journal.pgen.1002223)
    • Lin, D., Gibson, I. B., Moore, J. M., Thornton, P. C., Leal, S. M. & Hastings, P. J. 2011 Global chromosomal structural instability in a subpopulation of starving Escherichia coli cells. PLoS Genet. 7, e1002223. (doi:10.1371/journal.pgen.1002223)
    • (2011) PLoS Genet. , vol.7
    • Lin, D.1    Gibson, I.B.2    Moore, J.M.3    Thornton, P.C.4    Leal, S.M.5    Hastings, P.J.6
  • 95
    • 70949104315 scopus 로고    scopus 로고
    • Amplification of prolamin storage protein genes in different subfamilies of the Poaceae
    • (doi:10. 1007/s00122-009-1143-x)
    • Xu, J. H. & Messing, J. 2009 Amplification of prolamin storage protein genes in different subfamilies of the Poaceae. Theor. Appl. Genet. 119, 1397-1412. (doi:10. 1007/s00122-009-1143-x)
    • (2009) Theor. Appl. Genet. , vol.119 , pp. 1397-1412
    • Xu, J.H.1    Messing, J.2
  • 96
    • 84861899831 scopus 로고    scopus 로고
    • Antifreeze protein gene amplification facilitated niche exploitation and speciation in wolffish
    • (doi:10.1111/j. 1742-4658.2012.08605.x)
    • Desjardins, M., Graham, L. A., Davies, P. L. & Fletcher, G. L. 2012 Antifreeze protein gene amplification facilitated niche exploitation and speciation in wolffish. FEBS J. 279, 2215-2230. (doi:10.1111/j. 1742-4658.2012.08605.x)
    • (2012) FEBS J. , vol.279 , pp. 2215-2230
    • Desjardins, M.1    Graham, L.A.2    Davies, P.L.3    Fletcher, G.L.4
  • 97
    • 52149101564 scopus 로고    scopus 로고
    • Tracking the evolution of a cold stress associated gene family in cold tolerant grasses
    • (doi:10.1186/1471-2148-8-245)
    • Sandve, S. R., Rudi, H., Asp, T. & Rognli, O. A. 2008 Tracking the evolution of a cold stress associated gene family in cold tolerant grasses. BMC Evol. Biol. 8, 245. (doi:10.1186/1471-2148-8-245)
    • (2008) BMC Evol. Biol. , vol.8 , pp. 245
    • Sandve, S.R.1    Rudi, H.2    Asp, T.3    Rognli, O.A.4
  • 98
    • 67349254731 scopus 로고    scopus 로고
    • Duplication and adaptive evolution of the COR15 genes within the highly cold-tolerant Draba lineage (Brassicaceae)
    • (doi:10.1016/j.gene.2008.06.024)
    • Zhou, D. et al. 2009 Duplication and adaptive evolution of the COR15 genes within the highly cold-tolerant Draba lineage (Brassicaceae). Gene 441, 36-44. (doi:10.1016/j.gene.2008.06.024)
    • (2009) Gene , vol.441 , pp. 36-44
    • Zhou, D.1
  • 99
    • 77349104670 scopus 로고    scopus 로고
    • Compensatory gene amplification restores fitness after inter-species gene replacements
    • (doi:10. 1111/j.1365-2958.2009.07030.x)
    • Lind, P. A., Tobin, C., Berg, O. G., Kurland, C. G. & Andersson, D. I. 2010 Compensatory gene amplification restores fitness after inter-species gene replacements. Mol. Microbiol. 75, 1078-1089. (doi:10. 1111/j.1365-2958.2009.07030.x)
    • (2010) Mol. Microbiol. , vol.75 , pp. 1078-1089
    • Lind, P.A.1    Tobin, C.2    Berg, O.G.3    Kurland, C.G.4    Andersson, D.I.5
  • 100
    • 0034923228 scopus 로고    scopus 로고
    • Glyphosate selection of gene amplification in suspension cultures of 3 plant species
    • (doi:10.1034/j. 1399-3054.2001.1120411.x)
    • Widholm, J.M., Chinnala, A.R., Ryu, J.H., Song, H. S., Eggett, T. & Brotherton, J. E. 2001 Glyphosate selection of gene amplification in suspension cultures of 3 plant species. Physiol. Plant 112, 540-545. (doi:10.1034/j. 1399-3054.2001.1120411.x)
    • (2001) Physiol. Plant , vol.112 , pp. 540-545
    • Widholm, J.M.1    Chinnala, A.R.2    Ryu, J.H.3    Song, H.S.4    Eggett, T.5    Brotherton, J.E.6
  • 101
    • 77949890871 scopus 로고    scopus 로고
    • Gene amplification confers glyphosate resistance in Amaranthus palmeri
    • (doi:10.1073/pnas. 0906649107)
    • Gaines, T. A. et al. 2010 Gene amplification confers glyphosate resistance in Amaranthus palmeri. Proc. Natl Acad. Sci. USA 107, 1029-1034. (doi:10.1073/pnas. 0906649107)
    • (2010) Proc. Natl Acad. Sci. USA , vol.107 , pp. 1029-1034
    • Gaines, T.A.1
  • 102
    • 79958019905 scopus 로고    scopus 로고
    • Mechanism of resistance of evolved glyphosate-resistant Palmer amaranth (Amaranthus palmeri)
    • (doi:10.1021/jf104719k)
    • Gaines, T. A., Shaner, D. L., Ward, S. M., Leach, J. E., Preston, C. & Westra, P. 2011 Mechanism of resistance of evolved glyphosate-resistant Palmer amaranth (Amaranthus palmeri). J. Agric. Food. Chem. 59, 5886-5889. (doi:10.1021/jf104719k)
    • (2011) J. Agric. Food. Chem. , vol.59 , pp. 5886-5889
    • Gaines, T.A.1    Shaner, D.L.2    Ward, S.M.3    Leach, J.E.4    Preston, C.5    Westra, P.6
  • 103
    • 62449196667 scopus 로고    scopus 로고
    • Direct evidence that genetic variation in glycerol-3-phosphate and malate dehydrogenase genes (Gpdh and Mdh1) affects adult ethanol tolerance in Drosophila melanogaster
    • (doi:10. 1534/genetics.108.089383)
    • Eanes, W. F., Merritt, T. J., Flowers, J.M., Kumagai, S. & Zhu, C. T. 2009 Direct evidence that genetic variation in glycerol-3-phosphate and malate dehydrogenase genes (Gpdh and Mdh1) affects adult ethanol tolerance in Drosophila melanogaster. Genetics 181, 607-614. (doi:10. 1534/genetics.108.089383)
    • (2009) Genetics , vol.181 , pp. 607-614
    • Eanes, W.F.1    Merritt, T.J.2    Flowers, J.M.3    Kumagai, S.4    Zhu, C.T.5
  • 104
    • 34548501747 scopus 로고    scopus 로고
    • Natural history and evolutionary principles of gene duplication in fungi
    • (doi:10. 1038/nature06107)
    • Wapinski, I., Pfeffer, A., Friedman, N. & Regev, A. 2007 Natural history and evolutionary principles of gene duplication in fungi. Nature 449, 54-61. (doi:10. 1038/nature06107)
    • (2007) Nature , vol.449 , pp. 54-61
    • Wapinski, I.1    Pfeffer, A.2    Friedman, N.3    Regev, A.4
  • 105
    • 57749085421 scopus 로고    scopus 로고
    • Importance of lineage-specific expansion of plant tandem duplicates in the adaptive response to environmental stimuli
    • (doi:10.1104/pp.108.122457)
    • Hanada, K., Zou, C., Lehti-Shiu, M. D., Shinozaki, K. & Shiu, S. H. 2008 Importance of lineage-specific expansion of plant tandem duplicates in the adaptive response to environmental stimuli. Plant Physiol. 148, 993-1003. (doi:10.1104/pp.108.122457)
    • (2008) Plant Physiol. , vol.148 , pp. 993-1003
    • Hanada, K.1    Zou, C.2    Lehti-Shiu, M.D.3    Shinozaki, K.4    Shiu, S.H.5
  • 106
    • 42549143433 scopus 로고    scopus 로고
    • Consistent and contrasting properties of lineage-specific genes in the apicomplexan parasites Plasmodium and Theileria
    • (doi:10.1186/1471-2148-8-108)
    • Kuo, C. H. & Kissinger, J. C. 2008 Consistent and contrasting properties of lineage-specific genes in the apicomplexan parasites Plasmodium and Theileria. BMC Evol. Biol. 8, 108. (doi:10.1186/1471-2148-8-108)
    • (2008) BMC Evol. Biol. , vol.8 , pp. 108
    • Kuo, C.H.1    Kissinger, J.C.2
  • 107
    • 39749109407 scopus 로고    scopus 로고
    • Rapid rates of lineage-specific gene duplication and deletion in the alpha-globin gene family
    • (doi:10.1093/molbev/msn004)
    • Hoffmann, F. G., Opazo, J. C. & Storz, J. F. 2008 Rapid rates of lineage-specific gene duplication and deletion in the alpha-globin gene family. Mol. Biol. Evol. 25, 591-602. (doi:10.1093/molbev/msn004)
    • (2008) Mol. Biol. Evol. , vol.25 , pp. 591-602
    • Hoffmann, F.G.1    Opazo, J.C.2    Storz, J.F.3
  • 108
    • 44149128129 scopus 로고    scopus 로고
    • Extensive gene amplification and concerted evolution within the CPR family of cuticular proteins in mosquitoes
    • (doi:10.1016/j.ibmb. 2008.04.001)
    • Cornman, R. S. & Willis, J. H. 2008 Extensive gene amplification and concerted evolution within the CPR family of cuticular proteins in mosquitoes. Insect Biochem. Mol. Biol. 38, 661-676. (doi:10.1016/j.ibmb. 2008.04.001)
    • (2008) Insect Biochem. Mol. Biol. , vol.38 , pp. 661-676
    • Cornman, R.S.1    Willis, J.H.2
  • 109
    • 66149113974 scopus 로고    scopus 로고
    • Evolutionary history and stress regulation of plant receptor-like kinase/pelle genes
    • (doi:10.1104/pp.108.134353)
    • Lehti-Shiu, M. D., Zou, C., Hanada, K. & Shiu, S. H. 2009 Evolutionary history and stress regulation of plant receptor-like kinase/pelle genes. Plant Physiol. 150, 12-26. (doi:10.1104/pp.108.134353)
    • (2009) Plant Physiol. , vol.150 , pp. 12-26
    • Lehti-Shiu, M.D.1    Zou, C.2    Hanada, K.3    Shiu, S.H.4
  • 110
    • 77950261904 scopus 로고    scopus 로고
    • Evolutionary history and stress regulation of the lectin superfamily in higher plants
    • (doi:10.1186/1471-2148-10-79)
    • Jiang, S. Y., Ma, Z. & Ramachandran, S. 2010 Evolutionary history and stress regulation of the lectin superfamily in higher plants. BMC Evol. Biol. 10, 79. (doi:10.1186/1471-2148-10-79)
    • (2010) BMC Evol. Biol. , vol.10 , pp. 79
    • Jiang, S.Y.1    Ma, Z.2    Ramachandran, S.3
  • 111
    • 77949430286 scopus 로고    scopus 로고
    • Gallin; an antimicrobial peptide member of a new avian defensin family, the ovodefensins, has been subject to recent gene duplication
    • (doi:10.1186/1471-2172-11-12)
    • Gong, D., Wilson, P. W., Bain, M. M., McDade, K., Kalina, J., Herve-Grepinet, V., Nys, Y. & Dunn, I. C. 2010 Gallin; an antimicrobial peptide member of a new avian defensin family, the ovodefensins, has been subject to recent gene duplication. BMC Immunol. 11, 12. (doi:10.1186/1471-2172-11-12)
    • (2010) BMC Immunol. , vol.11 , pp. 12
    • Gong, D.1    Wilson, P.W.2    Bain, M.M.3    McDade, K.4    Kalina, J.5    Herve-Grepinet, V.6    Nys, Y.7    Dunn, I.C.8
  • 112
    • 77958478691 scopus 로고    scopus 로고
    • Gene duplication and environmental adaptation within yeast populations
    • (doi:10. 1093/gbe/evq043)
    • Ames, R. M., Rash, B. M., Hentges, K. E., Robertson, D. L., Delneri, D. & Lovell, S. C. 2010 Gene duplication and environmental adaptation within yeast populations. Genome Biol. Evol. 2, 591-601. (doi:10. 1093/gbe/evq043)
    • (2010) Genome Biol. Evol. , vol.2 , pp. 591-601
    • Ames, R.M.1    Rash, B.M.2    Hentges, K.E.3    Robertson, D.L.4    Delneri, D.5    Lovell, S.C.6
  • 113
    • 84856403530 scopus 로고    scopus 로고
    • Dynamics of gene duplication in the genomes of chlorophyll d-producing cyanobacteria: Implications for the ecological niche
    • (doi:10.1093/gbe/evr060)
    • Miller, S. R., Wood, A. M., Blankenship, R. E., Kim, M. & Ferriera, S. 2011 Dynamics of gene duplication in the genomes of chlorophyll d-producing cyanobacteria: implications for the ecological niche. Genome Biol. Evol. 3, 601-613. (doi:10.1093/gbe/evr060)
    • (2011) Genome Biol. Evol. , vol.3 , pp. 601-613
    • Miller, S.R.1    Wood, A.M.2    Blankenship, R.E.3    Kim, M.4    Ferriera, S.5
  • 114
    • 79551632781 scopus 로고    scopus 로고
    • The ecoresponsive genome of Daphnia pulex
    • (doi:10.1126/ science.1197761)
    • Colbourne, J. K. et al. 2011 The ecoresponsive genome of Daphnia pulex. Science 331, 555-561. (doi:10.1126/ science.1197761)
    • (2011) Science , vol.331 , pp. 555-561
    • Colbourne, J.K.1
  • 115
    • 84862957389 scopus 로고    scopus 로고
    • Dynamic gene copy number variation in collinear regions of grass genomes
    • (doi:10.1093/ molbev/msr261)
    • Xu, J. H., Bennetzen, J. L. & Messing, J. 2012 Dynamic gene copy number variation in collinear regions of grass genomes. Mol. Biol. Evol. 29, 861-871. (doi:10.1093/ molbev/msr261)
    • (2012) Mol. Biol. Evol. , vol.29 , pp. 861-871
    • Xu, J.H.1    Bennetzen, J.L.2    Messing, J.3
  • 116
    • 84857049782 scopus 로고    scopus 로고
    • Venom evolution through gene duplications
    • (doi:10.1016/j.gene. 2012.01.009)
    • Wong, E. S. & Belov, K. 2012 Venom evolution through gene duplications. Gene. 496, 1-7. (doi:10.1016/j.gene. 2012.01.009)
    • (2012) Gene. , vol.496 , pp. 1-7
    • Wong, E.S.1    Belov, K.2
  • 117
    • 56549111367 scopus 로고    scopus 로고
    • The evolution of animal chemosensory receptor gene repertoires: Roles of chance and necessity
    • (doi:10.1038/nrg2480)
    • Nei, M., Niimura, Y. & Nozawa, M. 2008 The evolution of animal chemosensory receptor gene repertoires: roles of chance and necessity. Nat. Rev. Genet. 9, 951-963. (doi:10.1038/nrg2480)
    • (2008) Nat. Rev. Genet. , vol.9 , pp. 951-963
    • Nei, M.1    Niimura, Y.2    Nozawa, M.3
  • 118
    • 76249088916 scopus 로고    scopus 로고
    • Evolutionary dynamics of olfactory receptor genes in chordates: Interaction between environments and genomic contents
    • (doi:10.1186/1479-7364-4-2-107)
    • Niimura, Y. 2009 Evolutionary dynamics of olfactory receptor genes in chordates: interaction between environments and genomic contents. Hum. Genomics 4, 107-118. (doi:10.1186/1479-7364-4-2-107)
    • (2009) Hum. Genomics , vol.4 , pp. 107-118
    • Niimura, Y.1
  • 119
    • 84856734877 scopus 로고    scopus 로고
    • Evolutionary genomics of genes involved in olfactory behavior in the Drosophila melanogaster species group
    • (doi:10.4137/EBO.S8484)
    • Lavagnino, N., Serra, F., Arbiza, L., Dopazo, H. & Hasson, E. 2012 Evolutionary genomics of genes involved in olfactory behavior in the Drosophila melanogaster species group. Evol. Bioinform. Online 8, 89-104. (doi:10.4137/EBO.S8484)
    • (2012) Evol. Bioinform. Online , vol.8 , pp. 89-104
    • Lavagnino, N.1    Serra, F.2    Arbiza, L.3    Dopazo, H.4    Hasson, E.5
  • 120
    • 33749166603 scopus 로고    scopus 로고
    • Beauty in the eye of the beholder: The two blue opsins of lycaenid butterflies and the opsin gene-driven evolution of sexually dimorphic eyes
    • (doi:10.1242/jeb.02360)
    • Sison-Mangus, M. P., Bernard, G. D., Lampel, J. & Briscoe, A. D. 2006 Beauty in the eye of the beholder: the two blue opsins of lycaenid butterflies and the opsin gene-driven evolution of sexually dimorphic eyes. J. Exp. Biol. 209, 3079-3090. (doi:10.1242/jeb.02360)
    • (2006) J. Exp. Biol. , vol.209 , pp. 3079-3090
    • Sison-Mangus, M.P.1    Bernard, G.D.2    Lampel, J.3    Briscoe, A.D.4
  • 121
    • 65349147033 scopus 로고    scopus 로고
    • Potential of fish opsin gene duplications to evolve new adaptive functions
    • (doi:10.1016/j.tig.2009.03.008)
    • Gojobori, J. & Innan, H. 2009 Potential of fish opsin gene duplications to evolve new adaptive functions. Trends Genet. 25, 198-202. (doi:10.1016/j.tig.2009.03.008)
    • (2009) Trends Genet. , vol.25 , pp. 198-202
    • Gojobori, J.1    Innan, H.2
  • 122
    • 43549106617 scopus 로고    scopus 로고
    • Diversification and adaptive sequence evolution of Caenorhabditis lysozymes (Nematoda: Rhabditidae)
    • (doi:10.1186/1471-2148-8-114)
    • Schulenburg, H. & Boehnisch, C. 2008 Diversification and adaptive sequence evolution of Caenorhabditis lysozymes (Nematoda: Rhabditidae). BMC Evol. Biol. 8, 114. (doi:10.1186/1471-2148-8-114)
    • (2008) BMC Evol. Biol. , vol.8 , pp. 114
    • Schulenburg, H.1    Boehnisch, C.2
  • 123
    • 67650899749 scopus 로고    scopus 로고
    • Selective histories of poplar protease inhibitors: Elevated polymorphism, purifying selection, and positive selection driving divergence of recent duplicates
    • (doi:10.1111/j.1469-8137.2009.02936.x)
    • Neiman, M., Olson, M. S. & Tiffin, P. 2009 Selective histories of poplar protease inhibitors: elevated polymorphism, purifying selection, and positive selection driving divergence of recent duplicates. New Phytol. 183, 740-750. (doi:10.1111/j.1469-8137.2009.02936.x)
    • (2009) New Phytol. , vol.183 , pp. 740-750
    • Neiman, M.1    Olson, M.S.2    Tiffin, P.3
  • 124
    • 42549135491 scopus 로고    scopus 로고
    • Altered patterns of gene duplication and differential gene gain and loss in fungal pathogens
    • (doi:10.1186/1471-2164-9-147)
    • Powell, A. J., Conant, G. C., Brown, D. E., Carbone, I. & Dean, R. A. 2008 Altered patterns of gene duplication and differential gene gain and loss in fungal pathogens. BMC Genomics 9, 147. (doi:10.1186/1471-2164-9-147)
    • (2008) BMC Genomics , vol.9 , pp. 147
    • Powell, A.J.1    Conant, G.C.2    Brown, D.E.3    Carbone, I.4    Dean, R.A.5
  • 125
    • 79955748635 scopus 로고    scopus 로고
    • Adaptation to drought in two wild tomato species: The evolution of the Asr gene family
    • (doi:10.1111/j.1469-8137.2011.03648.x)
    • Fischer, I., Camus-Kulandaivelu, L., Allal, F. & Stephan, W. 2011 Adaptation to drought in two wild tomato species: the evolution of the Asr gene family. New Phytol. 190, 1032-1044. (doi:10.1111/j.1469-8137.2011.03648.x)
    • (2011) New Phytol. , vol.190 , pp. 1032-1044
    • Fischer, I.1    Camus-Kulandaivelu, L.2    Allal, F.3    Stephan, W.4
  • 126
    • 70149102931 scopus 로고    scopus 로고
    • Evolutionary and functional insights into the mechanism underlying high-altitude adaptation of deer mouse hemoglobin
    • (doi:10.1073/pnas.0905224106)
    • Storz, J. F., Runck, A. M., Sabatino, S. J., Kelly, J. K., Ferrand, N., Moriyama, H., Weber, R. E. & Fago, A. 2009 Evolutionary and functional insights into the mechanism underlying high-altitude adaptation of deer mouse hemoglobin. Proc. Natl Acad. Sci. USA 106, 14 450-14 455. (doi:10.1073/pnas.0905224106)
    • (2009) Proc. Natl Acad. Sci. USA , vol.106
    • Storz, J.F.1    Runck, A.M.2    Sabatino, S.J.3    Kelly, J.K.4    Ferrand, N.5    Moriyama, H.6    Weber, R.E.7    Fago, A.8
  • 127
    • 13044283060 scopus 로고    scopus 로고
    • Molecular genetics of ecological diversification: Duplication and rapid evolution of toxin genes of the venomous gastropod Conus
    • (doi:10.1073/pnas.96.12.6820)
    • Duda Jr, T. F. & Palumbi, S. R. 1999 Molecular genetics of ecological diversification: duplication and rapid evolution of toxin genes of the venomous gastropod Conus. Proc. Natl Acad. Sci. USA 96, 6820-6823. (doi:10.1073/pnas.96.12.6820)
    • (1999) Proc. Natl Acad. Sci. USA , vol.96 , pp. 6820-6823
    • Duda Jr, T.F.1    Palumbi, S.R.2
  • 128
    • 33747442760 scopus 로고    scopus 로고
    • When positive selection of neurotoxin genes is missing The riddle of the sea anemone Nematostella vectensis
    • (doi:10.1111/j.1742-4658.2006.05397.x)
    • Moran, Y. & Gurevitz, M. 2006 When positive selection of neurotoxin genes is missing. The riddle of the sea anemone Nematostella vectensis. FEBS J. 273, 3886-3892. (doi:10.1111/j.1742-4658.2006.05397.x)
    • (2006) FEBS J. , vol.273 , pp. 3886-3892
    • Moran, Y.1    Gurevitz, M.2
  • 129
    • 33846669778 scopus 로고    scopus 로고
    • Inventing an arsenal: Adaptive evolution and neofunctionalization of snake venom phospholipase A2 genes
    • (doi:10.1186/1471-2148-7-2)
    • Lynch, V. J. 2007 Inventing an arsenal: adaptive evolution and neofunctionalization of snake venom phospholipase A2 genes. BMC Evol. Biol. 7, 2. (doi:10.1186/1471-2148-7-2)
    • (2007) BMC Evol. Biol. , vol.7 , pp. 2
    • Lynch, V.J.1
  • 130
    • 79951831891 scopus 로고    scopus 로고
    • Extraordinary conservation, gene loss, and positive selection in the evolution of an ancient neurotoxin
    • (doi:10.1093/molbev/msq295)
    • Murray, S. A., Mihali, T. K. & Neilan, B. A. 2011 Extraordinary conservation, gene loss, and positive selection in the evolution of an ancient neurotoxin. Mol. Biol. Evol. 28, 1173-1182. (doi:10.1093/molbev/msq295)
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 1173-1182
    • Murray, S.A.1    Mihali, T.K.2    Neilan, B.A.3
  • 131
    • 84856322933 scopus 로고    scopus 로고
    • Extreme diversity of scorpion venom peptides and proteins revealed by transcriptomic analysis: Implication for proteome evolution of scorpion venom arsenal
    • (doi:10.1016/j.jprot. 2011.11.029)
    • Ma, Y., He, Y., Zhao, R., Wu, Y., Li, W. & Cao, Z. 2012 Extreme diversity of scorpion venom peptides and proteins revealed by transcriptomic analysis: implication for proteome evolution of scorpion venom arsenal. J. Proteomics 75, 1563-1576. (doi:10.1016/j.jprot. 2011.11.029)
    • (2012) J. Proteomics , vol.75 , pp. 1563-1576
    • Ma, Y.1    He, Y.2    Zhao, R.3    Wu, Y.4    Li, W.5    Cao, Z.6
  • 132
    • 84864721498 scopus 로고    scopus 로고
    • Extensive and continuous duplication facilitates rapid evolution and diversification of gene families
    • (doi:10.1093/molbev/mss068)
    • Chang, D. & Duda Jr, T. F. 2012 Extensive and continuous duplication facilitates rapid evolution and diversification of gene families. Mol. Biol. Evol. 29, 2019-2029. (doi:10.1093/molbev/mss068)
    • (2012) Mol. Biol. Evol. , vol.29 , pp. 2019-2029
    • Chang, D.1    Duda Jr, T.F.2
  • 133
    • 84857394108 scopus 로고    scopus 로고
    • Independent recruitment of a flavin-dependent monooxygenase for safe accumulation of sequestered pyrrolizidine alkaloids in grasshoppers and moths
    • (doi:10.1371/journal.pone. 0031796)
    • Wang, L., Beuerle, T., Timbilla, J. & Ober, D. 2012 Independent recruitment of a flavin-dependent monooxygenase for safe accumulation of sequestered pyrrolizidine alkaloids in grasshoppers and moths. PLoS ONE 7, e31796. (doi:10.1371/journal.pone. 0031796)
    • (2012) PLoS ONE , vol.7
    • Wang, L.1    Beuerle, T.2    Timbilla, J.3    Ober, D.4
  • 134
    • 77954225164 scopus 로고    scopus 로고
    • Comprehensive survey of developmental genes in the pea aphid, Acyrthosiphon pisum: Frequent lineage-specific duplications and losses of developmental genes
    • (doi:10.1111/j.1365-2583.2009. 00944.x)
    • Shigenobu, S. et al. 2010 Comprehensive survey of developmental genes in the pea aphid, Acyrthosiphon pisum: frequent lineage-specific duplications and losses of developmental genes. Insect Mol. Biol. 19(Suppl. 2), 47-62. (doi:10.1111/j.1365-2583.2009. 00944.x)
    • (2010) Insect Mol. Biol. , vol.19 , Issue.SUPPL. 2 , pp. 47-62
    • Shigenobu, S.1
  • 135
    • 77951831492 scopus 로고    scopus 로고
    • Lateral transfer of genes from fungi underlies carotenoid production in aphids
    • (doi:10.1126/science. 1187113)
    • Moran, N. A. & Jarvik, T. 2010 Lateral transfer of genes from fungi underlies carotenoid production in aphids. Science 328, 624-627. (doi:10.1126/science. 1187113)
    • (2010) Science , vol.328 , pp. 624-627
    • Moran, N.A.1    Jarvik, T.2
  • 136
    • 57649233377 scopus 로고    scopus 로고
    • The evolution of the adenylate-forming protein family in beetles: Multiple luciferase gene paralogues in fireflies and glowworms
    • (doi:10. 1016/j.ympev.2008.09.026)
    • Day, J. C., Goodall, T. I. & Bailey, M. J. 2009 The evolution of the adenylate-forming protein family in beetles: multiple luciferase gene paralogues in fireflies and glowworms. Mol. Phylogenet. Evol. 50, 93-101. (doi:10. 1016/j.ympev.2008.09.026)
    • (2009) Mol. Phylogenet. Evol. , vol.50 , pp. 93-101
    • Day, J.C.1    Goodall, T.I.2    Bailey, M.J.3
  • 137
    • 67650337470 scopus 로고    scopus 로고
    • Duplication, selection and gene conversion in a Drosophila mojavensis female reproductive protein family
    • (doi:10.1534/genetics.108.099044)
    • Kelleher, E. S. & Markow, T. A. 2009 Duplication, selection and gene conversion in a Drosophila mojavensis female reproductive protein family. Genetics 181, 1451-1465. (doi:10.1534/genetics.108.099044)
    • (2009) Genetics , vol.181 , pp. 1451-1465
    • Kelleher, E.S.1    Markow, T.A.2
  • 138
    • 34447569298 scopus 로고    scopus 로고
    • Copy number variants and genetic traits: Closer to the resolution of phenotypic to genotypic variability
    • (doi:10.1038/nrg2149)
    • Beckmann, J. S., Estivill, X. & Antonarakis, S. E. 2007 Copy number variants and genetic traits: closer to the resolution of phenotypic to genotypic variability. Nat. Rev. Genet. 8, 639-646. (doi:10.1038/nrg2149)
    • (2007) Nat. Rev. Genet. , vol.8 , pp. 639-646
    • Beckmann, J.S.1    Estivill, X.2    Antonarakis, S.E.3
  • 139
    • 27144491328 scopus 로고    scopus 로고
    • Adaptive evolution of non-coding DNA in Drosophila
    • (doi:10. 1038/nature04107)
    • Andolfatto, P. 2005 Adaptive evolution of non-coding DNA in Drosophila. Nature 437, 1149-1152. (doi:10. 1038/nature04107)
    • (2005) Nature , vol.437 , pp. 1149-1152
    • Andolfatto, P.1
  • 140
    • 36749083463 scopus 로고    scopus 로고
    • Ohno's dilemma: Evolution of new genes under continuous selection
    • (doi:10.1073/pnas.0707158104)
    • Bergthorsson, U., Andersson, D. I. & Roth, J. R. 2007 Ohno's dilemma: evolution of new genes under continuous selection. Proc. Natl Acad. Sci. USA 104, 17 004-17 009. (doi:10.1073/pnas.0707158104)
    • (2007) Proc. Natl Acad. Sci. USA , vol.104
    • Bergthorsson, U.1    Andersson, D.I.2    Roth, J.R.3
  • 141
    • 70350195337 scopus 로고    scopus 로고
    • Gene amplification and adaptive evolution in bacteria
    • (doi:10.1146/annurev-genet-1021 08-134805)
    • Andersson, D. I. & Hughes, D. 2009 Gene amplification and adaptive evolution in bacteria. Annu. Rev. Genet. 43, 167-195. (doi:10.1146/annurev-genet-1021 08-134805)
    • (2009) Annu. Rev. Genet. , vol.43 , pp. 167-195
    • Andersson, D.I.1    Hughes, D.2
  • 142
    • 79951559649 scopus 로고    scopus 로고
    • The role of duplications in the evolution of genomes highlights the need for evolutionary-based approaches in comparative genomics
    • (doi:10.1186/1745-6150-6-11)
    • Levasseur, A. & Pontarotti, P. 2011 The role of duplications in the evolution of genomes highlights the need for evolutionary-based approaches in comparative genomics. Biol. Direct. 6, 11. (doi:10.1186/1745-6150-6-11)
    • (2011) Biol. Direct. , vol.6 , pp. 11
    • Levasseur, A.1    Pontarotti, P.2
  • 143
    • 33846433687 scopus 로고    scopus 로고
    • Experimental evolution of gene duplicates in a bacterial plasmid model
    • (doi:10. 1007/s00239-006-0087-x)
    • Holloway, A. K., Palzkill, T. & Bull, J. J. 2007 Experimental evolution of gene duplicates in a bacterial plasmid model. J. Mol. Evol. 64, 215-222. (doi:10. 1007/s00239-006-0087-x)
    • (2007) J. Mol. Evol. , vol.64 , pp. 215-222
    • Holloway, A.K.1    Palzkill, T.2    Bull, J.J.3
  • 144
    • 77955876041 scopus 로고    scopus 로고
    • Duplication frequency in a population of Salmonella enterica rapidly approaches steady state with or without recombination
    • (doi:10.1534/genetics.109.111963)
    • Reams, A. B., Kofoid, E., Savageau, M. & Roth, J. R. 2010 Duplication frequency in a population of Salmonella enterica rapidly approaches steady state with or without recombination. Genetics 184, 1077-1094. (doi:10.1534/genetics.109.111963)
    • (2010) Genetics , vol.184 , pp. 1077-1094
    • Reams, A.B.1    Kofoid, E.2    Savageau, M.3    Roth, J.R.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.