-
1
-
-
0019570557
-
Spontaneous tandem genetic duplications in Salmonella typhimurium arise by unequal recombination between rRNA (rrn) cistrons
-
Anderson, P. Roth, J. (1981) Spontaneous tandem genetic duplications in Salmonella typhimurium arise by unequal recombination between rRNA (rrn) cistrons. Proc Natl Acad Sci USA 78 : 3113 3117.
-
(1981)
Proc Natl Acad Sci USA
, vol.78
, pp. 3113-3117
-
-
Anderson, P.1
Roth, J.2
-
2
-
-
33748693294
-
The biological cost of mutational antibiotic resistance: Any practical conclusions?
-
Andersson, D.I. (2006) The biological cost of mutational antibiotic resistance: any practical conclusions? Curr Opin Microbiol 9 : 461 465.
-
(2006)
Curr Opin Microbiol
, vol.9
, pp. 461-465
-
-
Andersson, D.I.1
-
3
-
-
0033515041
-
An Escherichia coli strain with all chromosomal rRNA operons inactivated: Complete exchange of rRNA genes between bacteria
-
Asai, T., Zaporojets, D., Squires, C. Squires, C.L. (1999) An Escherichia coli strain with all chromosomal rRNA operons inactivated: complete exchange of rRNA genes between bacteria. Proc Natl Acad Sci USA 96 : 1971 1976.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 1971-1976
-
-
Asai, T.1
Zaporojets, D.2
Squires, C.3
Squires, C.L.4
-
4
-
-
0029867157
-
Selection intensity for codon bias and the effective population size of Escherichia coli
-
Berg, O.G. (1996) Selection intensity for codon bias and the effective population size of Escherichia coli. Genet 142 : 1379 1382.
-
(1996)
Genet
, vol.142
, pp. 1379-1382
-
-
Berg, O.G.1
-
5
-
-
0036899896
-
Evolution of microbial genomes: Sequence acquisition and loss
-
Berg, O.G. Kurland, C.G. (2002) Evolution of microbial genomes: sequence acquisition and loss. Mol Biol Evol 19 : 2265 2276.
-
(2002)
Mol Biol Evol
, vol.19
, pp. 2265-2276
-
-
Berg, O.G.1
Kurland, C.G.2
-
6
-
-
36749083463
-
Ohno's dilemma: Evolution of new genes under continuous selection
-
Bergthorsson, U., Andersson, D.I. Roth, J.R. (2007) Ohno's dilemma: evolution of new genes under continuous selection. Proc Natl Acad Sci USA 104 : 17004 17009.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 17004-17009
-
-
Bergthorsson, U.1
Andersson, D.I.2
Roth, J.R.3
-
7
-
-
0023694037
-
Evolution of a bacteria/plasmid association
-
Bouma, J.E. Lenski, R.E. (1988) Evolution of a bacteria/plasmid association. Nature 335 : 351 352.
-
(1988)
Nature
, vol.335
, pp. 351-352
-
-
Bouma, J.E.1
Lenski, R.E.2
-
8
-
-
0034565944
-
The evolutionary history of ribosomal protein RpS14: Horizontal gene transfer at the heart of the ribosome
-
Brochier, C., Philippe, H. Moreira, D. (2000) The evolutionary history of ribosomal protein RpS14: horizontal gene transfer at the heart of the ribosome. Trends Genet 16 : 529 533.
-
(2000)
Trends Genet
, vol.16
, pp. 529-533
-
-
Brochier, C.1
Philippe, H.2
Moreira, D.3
-
9
-
-
0347992016
-
Amelioration of the cost of conjugative plasmid carriage in Escherichia coli K12
-
Dahlberg, C. Chao, L. (2003) Amelioration of the cost of conjugative plasmid carriage in Escherichia coli K12. Genet 165 : 1641 1649.
-
(2003)
Genet
, vol.165
, pp. 1641-1649
-
-
Dahlberg, C.1
Chao, L.2
-
10
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko, K.A. Wanner, B.L. (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA 97 : 6640 6645.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
11
-
-
0025527885
-
Experimental studies of natural selection in bacteria
-
Dykhuizen, D.E. (1990) Experimental studies of natural selection in bacteria. Annu Rev Ecol Syst 21 : 373 398.
-
(1990)
Annu Rev Ecol Syst
, vol.21
, pp. 373-398
-
-
Dykhuizen, D.E.1
-
12
-
-
0021370660
-
Costs of accuracy determined by a maximal growth rate constraint
-
Ehrenberg, M. Kurland, C.G. (1984) Costs of accuracy determined by a maximal growth rate constraint. Q Rev Biophys 17 : 45 82.
-
(1984)
Q Rev Biophys
, vol.17
, pp. 45-82
-
-
Ehrenberg, M.1
Kurland, C.G.2
-
13
-
-
0037119587
-
Stochastic gene expression in a single cell
-
Elowitz, M.B., Levine, A.J., Siggia, E.D. Swain, P.S. (2002) Stochastic gene expression in a single cell. Science 297 : 1183 1186.
-
(2002)
Science
, vol.297
, pp. 1183-1186
-
-
Elowitz, M.B.1
Levine, A.J.2
Siggia, E.D.3
Swain, P.S.4
-
14
-
-
0029018327
-
Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter
-
Guzman, L.M., Belin, D., Carson, M.J. Beckwith, J. (1995) Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter. J Bacteriol 177 : 4121 4130.
-
(1995)
J Bacteriol
, vol.177
, pp. 4121-4130
-
-
Guzman, L.M.1
Belin, D.2
Carson, M.J.3
Beckwith, J.4
-
15
-
-
0642344263
-
Duplication is more common among laterally transferred genes than among indigenous genes
-
Hooper, S.D. Berg, O.G. (2003a) Duplication is more common among laterally transferred genes than among indigenous genes. Genome Biol 4 : R48.
-
(2003)
Genome Biol
, vol.4
, pp. 48
-
-
Hooper, S.D.1
Berg, O.G.2
-
16
-
-
0037572262
-
On the nature of gene innovation: Duplication patterns in microbial genomes
-
Hooper, S.D. Berg, O.G. (2003b) On the nature of gene innovation: duplication patterns in microbial genomes. Mol Biol Evol 20 : 945 954.
-
(2003)
Mol Biol Evol
, vol.20
, pp. 945-954
-
-
Hooper, S.D.1
Berg, O.G.2
-
17
-
-
0033616714
-
Horizontal gene transfer among genomes: The complexity hypothesis
-
Jain, R., Rivera, M.C. Lake, J.A. (1999) Horizontal gene transfer among genomes: the complexity hypothesis. Proc Natl Acad Sci USA 96 : 3801 3806.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 3801-3806
-
-
Jain, R.1
Rivera, M.C.2
Lake, J.A.3
-
18
-
-
0000800333
-
On the probability of fixation of mutant genes in a population
-
Kimura, M. (1962) On the probability of fixation of mutant genes in a population. Genet 47 : 713 719.
-
(1962)
Genet
, vol.47
, pp. 713-719
-
-
Kimura, M.1
-
19
-
-
64849114915
-
Coding-sequence determinants of gene expression in Escherichia coli
-
Kudla, G., Murray, A.W., Tollervey, D. Plotkin, J.B. (2009) Coding-sequence determinants of gene expression in Escherichia coli. Science 324 : 255 258.
-
(2009)
Science
, vol.324
, pp. 255-258
-
-
Kudla, G.1
Murray, A.W.2
Tollervey, D.3
Plotkin, J.B.4
-
20
-
-
57549115252
-
The fate of new bacterial genes
-
Kuo, C.H. Ochman, H. (2009) The fate of new bacterial genes. FEMS Microbiol Rev 33 : 38 43.
-
(2009)
FEMS Microbiol Rev
, vol.33
, pp. 38-43
-
-
Kuo, C.H.1
Ochman, H.2
-
23
-
-
0032482924
-
Molecular archaeology of the Escherichia coli genome
-
Lawrence, J.G. Ochman, H. (1998) Molecular archaeology of the Escherichia coli genome. Proc Natl Acad Sci USA 95 : 9413 9417.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 9413-9417
-
-
Lawrence, J.G.1
Ochman, H.2
-
24
-
-
0035225012
-
Two C or not two C: Recurrent disruption of Zn-ribbons, gene duplication, lineage-specific gene loss, and horizontal gene transfer in evolution of bacterial ribosomal proteins
-
RESEARCH 0033
-
Makarova, K.S., Ponomarev, V.A. Koonin, E.V. (2001) Two C or not two C: recurrent disruption of Zn-ribbons, gene duplication, lineage-specific gene loss, and horizontal gene transfer in evolution of bacterial ribosomal proteins. Genome Biol 2 : 1 14. RESEARCH 0033
-
(2001)
Genome Biol
, vol.2
, pp. 1-14
-
-
Makarova, K.S.1
Ponomarev, V.A.2
Koonin, E.V.3
-
25
-
-
0019297501
-
Genetic variability and effective population size when local extinction and recolonization of subpopulations are frequent
-
Maruyama, T. Kimura, M. (1980) Genetic variability and effective population size when local extinction and recolonization of subpopulations are frequent. Proc Natl Acad Sci USA 77 : 6710 6714.
-
(1980)
Proc Natl Acad Sci USA
, vol.77
, pp. 6710-6714
-
-
Maruyama, T.1
Kimura, M.2
-
26
-
-
0026522792
-
Selection of laboratory wild-type phenotype from natural isolates of Escherichia coli in chemostats
-
Mikkola, R. Kurland, C.G. (1992) Selection of laboratory wild-type phenotype from natural isolates of Escherichia coli in chemostats. Mol Biol Evol 9 : 394 402.
-
(1992)
Mol Biol Evol
, vol.9
, pp. 394-402
-
-
Mikkola, R.1
Kurland, C.G.2
-
27
-
-
33746008173
-
Selective silencing of foreign DNA with low GC content by the H-NS protein in Salmonella
-
Navarre, W.W., Porwollik, S., Wang, Y., McClelland, M., Rosen, H., Libby, S.J. Fang, F.C. (2006) Selective silencing of foreign DNA with low GC content by the H-NS protein in Salmonella. Science 313 : 236 238.
-
(2006)
Science
, vol.313
, pp. 236-238
-
-
Navarre, W.W.1
Porwollik, S.2
Wang, Y.3
McClelland, M.4
Rosen, H.5
Libby, S.J.6
Fang, F.C.7
-
28
-
-
0034671796
-
Evolutionary dynamics of full genome content in Escherichia coli
-
Ochman, H. Jones, I.B. (2000) Evolutionary dynamics of full genome content in Escherichia coli. EMBO J 19 : 6637 6643.
-
(2000)
EMBO J
, vol.19
, pp. 6637-6643
-
-
Ochman, H.1
Jones, I.B.2
-
29
-
-
0034682335
-
Lateral gene transfer and the nature of bacterial innovation
-
Ochman, H., Lawrence, J.G. Groisman, E.A. (2000) Lateral gene transfer and the nature of bacterial innovation. Nature 405 : 299 304.
-
(2000)
Nature
, vol.405
, pp. 299-304
-
-
Ochman, H.1
Lawrence, J.G.2
Groisman, E.A.3
-
31
-
-
0012088802
-
Population size and rate of evolution
-
Ohta, T. (1972) Population size and rate of evolution. J Mol Evol 1 : 305 314.
-
(1972)
J Mol Evol
, vol.1
, pp. 305-314
-
-
Ohta, T.1
-
32
-
-
0038157152
-
Dosage sensitivity and the evolution of gene families in yeast
-
Papp, B., Pal, C. Hurst, L.D. (2003) Dosage sensitivity and the evolution of gene families in yeast. Nature 424 : 194 197.
-
(2003)
Nature
, vol.424
, pp. 194-197
-
-
Papp, B.1
Pal, C.2
Hurst, L.D.3
-
33
-
-
65449142090
-
Evolution of new gene functions: Simulation and analysis of the amplification model
-
Pettersson, M.E., Sun, S., Andersson, D.I. Berg, O.G. (2009) Evolution of new gene functions: simulation and analysis of the amplification model. Genetica 135 : 309 324.
-
(2009)
Genetica
, vol.135
, pp. 309-324
-
-
Pettersson, M.E.1
Sun, S.2
Andersson, D.I.3
Berg, O.G.4
-
34
-
-
0023650543
-
The codon Adaptation Index - A measure of directional synonymous codon usage bias, and its potential applications
-
Sharp, P.M. Li, W.H. (1987) The codon Adaptation Index - a measure of directional synonymous codon usage bias, and its potential applications. Nucleic Acids Res 15 : 1281 1295.
-
(1987)
Nucleic Acids Res
, vol.15
, pp. 1281-1295
-
-
Sharp, P.M.1
Li, W.H.2
-
35
-
-
36249021315
-
Genome-wide experimental determination of barriers to horizontal gene transfer
-
Sorek, R., Zhu, Y., Creevey, C.J., Francino, M.P., Bork, P. Rubin, E.M. (2007) Genome-wide experimental determination of barriers to horizontal gene transfer. Science 318 : 1449 1452.
-
(2007)
Science
, vol.318
, pp. 1449-1452
-
-
Sorek, R.1
Zhu, Y.2
Creevey, C.J.3
Francino, M.P.4
Bork, P.5
Rubin, E.M.6
-
36
-
-
23944475626
-
Mechanisms of, and barriers to, horizontal gene transfer between bacteria
-
Thomas, C.M. Nielsen, K.M. (2005) Mechanisms of, and barriers to, horizontal gene transfer between bacteria. Nat Rev Microbiol 3 : 711 721.
-
(2005)
Nat Rev Microbiol
, vol.3
, pp. 711-721
-
-
Thomas, C.M.1
Nielsen, K.M.2
-
37
-
-
39749170667
-
Complexity, connectivity, and duplicability as barriers to lateral gene transfer
-
Wellner, A., Lurie, M.N. Gophna, U. (2007) Complexity, connectivity, and duplicability as barriers to lateral gene transfer. Genome Biol 8 : R156.
-
(2007)
Genome Biol
, vol.8
, pp. 156
-
-
Wellner, A.1
Lurie, M.N.2
Gophna, U.3
|