메뉴 건너뛰기




Volumn 7, Issue , 2007, Pages

Inventing an arsenal: Adaptive evolution and neofunctionalization of snake venom phospholipase A2 genes

Author keywords

[No Author keywords available]

Indexed keywords

PHOSPHOLIPASE A2; SNAKE VENOM; PHOSPHOLIPASE A;

EID: 33846669778     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-7-2     Document Type: Article
Times cited : (180)

References (34)
  • 1
    • 0000927770 scopus 로고
    • Phospholipases
    • New York, Academic Press Boyer PD 3rd
    • Phospholipases. EA Dennis, The Enzymes New York, Academic Press, Boyer PD, 3rd 1983 16
    • (1983) The Enzymes , vol.16
    • Dennis, E.A.1
  • 3
    • 0029617267 scopus 로고
    • The role of enzymatic activity in inhibition of the extrinsic tenase complex by phospholipase A2 isoenzymes from Naja nigricollis venom
    • 10.1016/0041-0101(95)00103. 8866616
    • The role of enzymatic activity in inhibition of the extrinsic tenase complex by phospholipase A2 isoenzymes from Naja nigricollis venom. RM Kini HJ Evans, Toxicon 1995 33 1585 1590 10.1016/0041-0101(95)00103-4 8866616
    • (1995) Toxicon , vol.33 , Issue.4 , pp. 1585-1590
    • Kini, R.M.1    Evans, H.J.2
  • 4
    • 0029854094 scopus 로고    scopus 로고
    • The proliferative effects of ammodytin L from the venom of Vipera ammodytes on 208F rat fibroblasts in culture.
    • The proliferative effects of ammodytin L from the venom of Vipera ammodytes on 208F rat fibroblasts in culture. S Rufini Cesaroni, M.P., Balestro, N., Luly, P., Biochemical Journal 1996 320 318 326
    • (1996) Biochemical Journal , vol.320 , pp. 318-326
    • Rufini, S.1    Cesaroni, M.P.2    Balestro, N.3    Luly, P.4
  • 5
    • 0024312040 scopus 로고
    • A model to explain the pharmacological effects of snake venom phospholipases A2
    • 10.1016/0041-0101(89)90013. 2665186
    • A model to explain the pharmacological effects of snake venom phospholipases A2. RM Kini HJ Evans, Toxicon 1989 27 613 635 10.1016/0041-0101(89)90013-5 2665186
    • (1989) Toxicon , vol.27 , Issue.5 , pp. 613-635
    • Kini, R.M.1    Evans, H.J.2
  • 8
    • 0032552875 scopus 로고    scopus 로고
    • Positive Darwinian Selection inVipera palaestinaePhospholipase A2Genes Is Unexpectedly Limited to the Third Exon
    • 10.1006/bbrc.1998.9528
    • Positive Darwinian Selection inVipera palaestinaePhospholipase A2Genes Is Unexpectedly Limited to the Third Exon. D Kordis A Bdolah F Gubensek, Biochemical and Biophysical Research Communications 1998 251 613 619 10.1006/bbrc.1998.9528
    • (1998) Biochemical and Biophysical Research Communications , vol.251 , pp. 613-619
    • Kordis, D.1    Bdolah, A.2    Gubensek, F.3
  • 9
    • 0032953625 scopus 로고    scopus 로고
    • Accelerated evolution and molecular surface of venom phospholipase A2 enzymes.
    • 10.1007/PL00006450. 9929380
    • Accelerated evolution and molecular surface of venom phospholipase A2 enzymes. RM Kini Chan, Y.M., Journal of Molecular Evolution 1999 48 125 132 10.1007/PL00006450 9929380
    • (1999) Journal of Molecular Evolution , vol.48 , pp. 125-132
    • Kini, R.M.1    Chan, Y.M.2
  • 10
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • 10.1093/bioinformatics/btg180. 12912839
    • MrBayes 3: Bayesian phylogenetic inference under mixed models. F Ronquist JP Huelsenbeck, Bioinformatics 2003 19 1572 1574 10.1093/bioinformatics/btg180 12912839
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 11
    • 0031296691 scopus 로고    scopus 로고
    • Inferring Species Trees from Gene Trees: A Phylogenetic Analysis of the Elapidae (Serpentes) Based on the Amino Acid Sequences of Venom Proteins
    • 10.1006/mpev.1997.0434
    • Inferring Species Trees from Gene Trees: A Phylogenetic Analysis of the Elapidae (Serpentes) Based on the Amino Acid Sequences of Venom Proteins. JB Slowinski A Knight AP Rooney, Molecular Phylogenetics and Evolution 1997 8 349 362 10.1006/mpev.1997.0434
    • (1997) Molecular Phylogenetics and Evolution , vol.8 , pp. 349-362
    • Slowinski, J.B.1    Knight, A.2    Rooney, A.P.3
  • 12
    • 0037067235 scopus 로고    scopus 로고
    • Nucleotide sequence of phospholipase A2 gene expressed in snake pancreas reveals the molecular evolution of toxic phospholipase A2 genes
    • 10.1016/S0378-1119(02)00682. 12119117
    • Nucleotide sequence of phospholipase A2 gene expressed in snake pancreas reveals the molecular evolution of toxic phospholipase A2 genes. TJ Fujimi Y Kariya T Tsuchiya T Tamiya, Gene 2002 292 225 231 10.1016/S0378-1119(02)00682-0 12119117
    • (2002) Gene , vol.292 , pp. 225-231
    • Fujimi, T.J.1    Kariya, Y.2    Tsuchiya, T.3    Tamiya, T.4
  • 13
    • 0023019601 scopus 로고
    • The lysine-49 phospholipase A2 from the venom of Agkistrodon piscivorus piscivorus. Relation of structure and function to other phospholipases A2 [published erratum appears in J Biol Chem 1993 Mar 15;268(8):6064]
    • 3082870
    • The lysine-49 phospholipase A2 from the venom of Agkistrodon piscivorus piscivorus. Relation of structure and function to other phospholipases A2 [published erratum appears in J Biol Chem 1993 Mar 15;268(8):6064]. JM Maraganore RL Heinrikson, J Biol Chem 1986 261 4797 4804 3082870
    • (1986) J Biol Chem , vol.261 , pp. 4797-4804
    • Maraganore, J.M.1    Heinrikson, R.L.2
  • 14
    • 0023727484 scopus 로고    scopus 로고
    • The role of aspartic acid-49 in the active site of phospholipase A2. a site-specific mutagenesis study of porcine pancreatic phospholipase A2 and the rationale of the enzymatic activity of [lysine49]phospholipase A2 from Agkistrodon piscivorus piscivorus' venom.
    • 10.1111/j.1432
    • The role of aspartic acid-49 in the active site of phospholipase A2. A site-specific mutagenesis study of porcine pancreatic phospholipase A2 and the rationale of the enzymatic activity of [lysine49]phospholipase A2 from Agkistrodon piscivorus piscivorus' venom. CJ van den Bergh Slotboom, A.J., Verheij, H.M., de Haas, G.H.,, European Journal of Biochemistry 1998 176 353 357 10.1111/j.1432-1033.1988.tb14288.x
    • (1998) European Journal of Biochemistry , vol.176 , pp. 353-357
    • Van Den Bergh, C.J.1    Slotboom, A.J.2    Verheij, H.M.3    De Haas, G.H.4
  • 15
    • 0026068009 scopus 로고
    • The effect of myotoxins isolated from Bothrops snake venoms on multilamellar liposomes: Relationship to phospholipase A2, anticoagulant and myotoxic activities.
    • 10.1016/0005-2736(91)90086. 1764457
    • The effect of myotoxins isolated from Bothrops snake venoms on multilamellar liposomes: relationship to phospholipase A2, anticoagulant and myotoxic activities. C Diaz Gutierez, J.M., Lomonte, B., Gene, J.A., Biochim Biophys Acta 1991 1070 455 460 10.1016/0005-2736(91)90086-N 1764457
    • (1991) Biochim Biophys Acta , vol.1070 , pp. 455-460
    • Diaz, C.1    Gutierez, J.M.2    Lomonte, B.3    Gene, J.A.4
  • 17
    • 0028168856 scopus 로고
    • A codon-based model of nucleotide substitution for protein-coding DNA sequences
    • 7968486
    • A codon-based model of nucleotide substitution for protein-coding DNA sequences. N Goldman Z Yang, Mol Biol Evol 1994 11 725 736 7968486
    • (1994) Mol Biol Evol , vol.11 , pp. 725-736
    • Goldman, N.1    Yang, Z.2
  • 18
    • 0031897964 scopus 로고    scopus 로고
    • Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution
    • 9580986
    • Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution. Z Yang, Mol Biol Evol 1998 15 568 573 9580986
    • (1998) Mol Biol Evol , vol.15 , pp. 568-573
    • Yang, Z.1
  • 20
    • 0036544871 scopus 로고    scopus 로고
    • Adaptive evolution of a duplicated pancreatic ribonuclease gene in a leaf-eating monkey.
    • 10.1038/ng852. 11925567
    • Adaptive evolution of a duplicated pancreatic ribonuclease gene in a leaf-eating monkey. J Zhang, Zhang, Y., Rosenberg, H.F, Nature Genetics 2002 30 411 415 10.1038/ng852 11925567
    • (2002) Nature Genetics , vol.30 , pp. 411-415
    • Zhang, J.1    Zhang, Y.2    Rosenberg, H.F.3
  • 21
    • 0035895278 scopus 로고    scopus 로고
    • Genetic architecture of thermal adaptation in Escherichia coli
    • 11149947. 10.1073/pnas.021448998
    • Genetic architecture of thermal adaptation in Escherichia coli. MM Riehle AF Bennett AD Long, PNAS 2001 98 525 530 11149947 10.1073/pnas.021448998
    • (2001) PNAS , vol.98 , pp. 525-530
    • Riehle, M.M.1    Bennett, A.F.2    Long, A.D.3
  • 22
    • 0036934198 scopus 로고    scopus 로고
    • Relationships between sexual dimophism and niche partitioning within a clade of sea snakes (Laticaudinae)
    • 10.1007/s00442-002-1012
    • Relationships between sexual dimophism and niche partitioning within a clade of sea snakes (Laticaudinae). R Shine Reed, R. N., Shelty, S., Cogger, H. G., Oecologia 2002 133 45 53 10.1007/s00442-002-1012-7
    • (2002) Oecologia , vol.133 , Issue.7 , pp. 45-53
    • Shine, R.1    Reed, R.N.2    Shelty, S.3    Cogger, H.G.4
  • 23
    • 27944451061 scopus 로고    scopus 로고
    • Food Habits of the Sea Snake, Laticauda semifasciata
    • Food Habits of the Sea Snake, Laticauda semifasciata. Y Su Fong, S.-C., Tu, M.-C., Zoological Studies 2005 44 403 408
    • (2005) Zoological Studies , vol.44 , pp. 403-408
    • Su, Y.1    Fong, S.-C.2    Tu, M.-C.3
  • 24
    • 0000751888 scopus 로고
    • Habitats, diets, and sympatry in snakes: A study from Australia
    • Habitats, diets, and sympatry in snakes: a study from Australia. R Shine, Canadian Journal of Zoology 1977 55 1118 1128
    • (1977) Canadian Journal of Zoology , vol.55 , pp. 1118-1128
    • Shine, R.1
  • 26
    • 0033639150 scopus 로고    scopus 로고
    • Statistical Methods for detecting molecular adaptation
    • Statistical Methods for detecting molecular adaptation. Z Yang Bielawski, J. P., Trends in Ecology and Evoltuion 2000 15 1994 1997
    • (2000) Trends in Ecology and Evoltuion , vol.15 , pp. 1994-1997
    • Yang, Z.1    Bielawski, J.P.2
  • 27
    • 1042275605 scopus 로고    scopus 로고
    • Excitement ahead: Structure, function and mechanism of snake venom phospholipase A2 enzymes
    • 10.1016/j.toxicon.2003.11.002. 15019485
    • Excitement ahead: structure, function and mechanism of snake venom phospholipase A2 enzymes. RM Kini, Toxicon 2003 42 827 840 10.1016/j.toxicon. 2003.11.002 15019485
    • (2003) Toxicon , vol.42 , pp. 827-840
    • Kini, R.M.1
  • 28
    • 1042287120 scopus 로고    scopus 로고
    • Mapping structural determinants of biological activities in snake venom phospholipases A2 by sequence analysis and site directed mutagenesis
    • 10.1016/j.toxicon.2003.11.027. 15019488
    • Mapping structural determinants of biological activities in snake venom phospholipases A2 by sequence analysis and site directed mutagenesis. L Chioato RJ Ward, Toxicon 2003 42 869 883 10.1016/j.toxicon.2003.11.027 15019488
    • (2003) Toxicon , vol.42 , pp. 869-883
    • Chioato, L.1    Ward, R.J.2
  • 29
    • 1042287118 scopus 로고    scopus 로고
    • Chemical modifications of phospholipases A2 from snake venoms: Effects on catalytic and pharmacological properties
    • 10.1016/j.toxicon.2003.11.004. 15019487
    • Chemical modifications of phospholipases A2 from snake venoms: effects on catalytic and pharmacological properties. AM Soares JR Giglio, Toxicon 2003 42 855 868 10.1016/j.toxicon.2003.11.004 15019487
    • (2003) Toxicon , vol.42 , pp. 855-868
    • Soares, A.M.1    Giglio, J.R.2
  • 31
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressivemultiple sequence alignment through sequence weighting,position-specific gap penalties and weight matrix choice.
    • 7984417. 10.1093/nar/22.22.4673
    • CLUSTAL W: improving the sensitivity of progressivemultiple sequence alignment through sequence weighting,position-specific gap penalties and weight matrix choice. D Higgins Thompson, J., Gibson, T., Thompson, J.D., Higgins, D.G., Gibson, T.J., Nucleic Acids Research 1994 22 4673 4680 7984417 10.1093/nar/22.22.4673
    • (1994) Nucleic Acids Research , vol.22 , pp. 4673-4680
    • Higgins, D.1    Thompson, J.2    Gibson, T.3    Thompson, J.D.4    Higgins, D.G.5    Gibson, T.J.6
  • 32
    • 0030683599 scopus 로고    scopus 로고
    • PAML. a program package for phylogenetic analysis by maximum likelihood.
    • 9367129
    • PAML. a program package for phylogenetic analysis by maximum likelihood. Z Yang, CABIOS 1997 13 555 556 9367129
    • (1997) CABIOS , vol.13 , pp. 555-556
    • Yang, Z.1
  • 33
    • 0034097381 scopus 로고    scopus 로고
    • Codon-Substitution Models for Heterogeneous Selection Pressure at Amino Acid Sites
    • 10790415
    • Codon-Substitution Models for Heterogeneous Selection Pressure at Amino Acid Sites. Z Yang R Nielsen N Goldman AMK Pedersen, Genetics 2000 155 431 449 10790415
    • (2000) Genetics , vol.155 , pp. 431-449
    • Yang, Z.1    Nielsen, R.2    Goldman, N.3    Pedersen, A.M.K.4
  • 34
    • 0031473847 scopus 로고    scopus 로고
    • SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling
    • 10.1002/elps.1150181505. 9504803
    • SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling. N Guex, Peitsch, M.C. Electrophoresis 1997 18 2714 2723 10.1002/elps.1150181505 9504803
    • (1997) Electrophoresis , vol.18 , pp. 2714-2723
    • Guex, N.1    Peitsch, M.C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.