How to deal with the upcoming challenges in GMO detection in food and feed

Journal of Biomedicine and Biotechnology

Volumn 2012, Issue , 2012, Pages

  Broeders, Sylvia R M ^a   De Keersmaecker, Sigrid C J ^a   Roosens, Nancy H C ^a  

^a SCIENTIFIC INSTITUTE OF PUBLIC HEALTH   (Belgium)

Author keywords

[No Author keywords available]

Indexed keywords

ZINC FINGER NUCLEASE;

DNA METHYLATION; DNA MODIFICATION; DNA SEQUENCE; EVOLUTION; FOOD ANALYSIS; GENE AMPLIFICATION; GENETICALLY MODIFIED FOOD; GREEN CHEMISTRY; HERBICIDE TOLERANCE; INSECT RESISTANCE; MUTAGENESIS; NONHUMAN; PAPAYA; PLANT GENOME; REAL TIME POLYMERASE CHAIN REACTION; REVIEW; RHIZOBIUM RADIOBACTER; SCREENING; TRANSGENIC ORGANISM; ANIMAL; ANIMAL FOOD; GENETIC PROCEDURES; GENETICS;

ANIMAL FEED; ANIMALS; FOOD, GENETICALLY MODIFIED; GENETIC TECHNIQUES; ORGANISMS, GENETICALLY MODIFIED;

EID: 84869041418     PISSN: 11107243     EISSN: 11107251     Source Type: Journal    
DOI: 10.1155/2012/402418     Document Type: Review

References (82)

1. James C., Global status of commercialized biotech/GM crops: 2011. Executive summary. ISAAA Brief 2011 43
2. Dymond M., Hurr K., The Global Status of Commercialised Genetically Modified Plants (1 July 200831 December 2009) 2010 Wellington, New Zealand Plant Imports, MAF Biosecurity
3. European Parliament, Commission regulation (EC) No 1830/2003 of the European Parliament and of the Council of 22 September 2003 concerning the traceability and labelling of genetically modified organisms and the traceability of food and feed products produced from genetically modified organisms and amending Directive 2001/18/EC. Official Journal of the European Union 2003 L 268 24 28
4. Bean C. E., Japan Biotechnology MAFF's Biotech food labeling standards (revised). GAIN Report 2002 JA2010 USDA, GAIN
5. Wiggin G. W., Russian federation. Food and agricultural import regulations and standards. New food safety and GMO labeling requirements. GAIN Report 2002 RS2020 USDA
6. Stein A. J., Rodriguez-Cerezo E., The global pipeline of new GM crops. Implications of asynchroneous approval for international trade. EU23846-EN 2009
7. de Suza L., Brazilian Virus-Resistant Beans 2011 BIOfortified
8. Fox J. L., Puzzling industry response to ProdiGene fiasco. Nature Biotechnology 2003 21 1 3 4 2-s2.0-0038266834
9. APHIS, Biotechnology. Noncompliance History 2011 United States Department of Agriculture, Animal and Plant Health Inspection Service, USDA
10. Zapiola M. L., Campbell C. K., Butler M. D., Mallory-Smith C. A., Escape and establishment of transgenic glyphosate-resistant creeping bentgrass Agrostis stolonifera in Oregon, USA: a 4-year study. Journal of Applied Ecology 2008 45 2 486 494 2-s2.0-40949132598 10.1111/j.1365-2664.2007.01430.x (Pubitemid 351406239)
11. Vermij P., Liberty Link rice raises specter of tightened regulations. Nature Biotechnology 2006 24 11 1301 1302 2-s2.0-33947125863 10.1038/nbt1106-1301
12. Holst-Jensen A., Testing for genetically modified organisms (GMOs): past, present and future perspectives. Biotechnology Advances 2009 27 6 1071 1082 2-s2.0-70349991410 10.1016/j.biotechadv.2009.05.025
13. Zhang D., Guo J., The development and standardization of testing methods for genetically modified organisms and their derived products. Journal of Integrative Plant Biology 2011 53 7 539 551 2-s2.0-79960144445 10.1111/j.1744-7909.2011.01060.x
14. Dong W., Yang L., Shen K., Kim B., Kleter G. A., Marvin H. J. P., Guo R., Liang W., Zhang D., GMDD: a database of GMO detection methods. BMC Bioinformatics 2008 9, article 260 2-s2.0-45749128220 10.1186/1471-2105-9-260 (Pubitemid 351866016)
15. Miraglia M., Berdal K. G., Brera C., Corbisier P., Holst-Jensen A., Kok E. J., Marvin H. J. P., Schimmel H., Rentsch J., Van Rie J. P. P. F., Zagon J., Detection and traceability of genetically modified organisms in the food production chain. Food and Chemical Toxicology 2004 42 7 1157 1180 2-s2.0-2342615576 10.1016/j.fct.2004.02.018 (Pubitemid 38581213)
16. Holst-Jensen A., De Loose M., Van Den Eede G., Coherence between legal requirements and approaches for detection of genetically modified organisms (GMOs) and their derived products. Journal of Agricultural and Food Chemistry 2006 54 8 2799 2809 2-s2.0-33646514436 10.1021/jf052849a
17. Anklam E., Gadani F., Heinze P., Pijnenburg H., Van Eede G. D., Analytical methods for detection and determination of genetically modified organisms in agricultural crops and plant-derived food products. European Food Research and Technology 2002 214 1 3 26 2-s2.0-34249283265 10.1007/s002170100415
18. Querci M., Van den Bulcke M., Žel J., Van Den Eede G., Broll H., New approaches in GMO detection. Analytical and Bioanalytical Chemistry 2010 396 6 1991 2002 2-s2.0-77951295365 10.1007/s00216-009-3237-3
19. Deisingh A. K., Badrie N., Detection approaches for genetically modified organisms in foods. Food Research International 2005 38 6 639 649 2-s2.0-17644396390 10.1016/j.foodres.2005.01.003 (Pubitemid 40560925)
20. Marmiroli N., Maestri E., Gullì M., Malcevschi A., Peano C., Bordoni R., De Bellis G., Methods for detection of GMOs in food and feed. Analytical and Bioanalytical Chemistry 2008 392 3 369 384 2-s2.0-51349133520 10.1007/s00216-008-2303-6
21. Ovesna J., Demnerova K., Pouchova V., GMO detection. Food Microbiology and Food Safety 2009 515 532
22. Grohmann L., Detection of genetically modified plants in seeds, food and feed. Biotechnology in Agriculture and Forestry 2010 64 1 117 136
23. Joint Research Centre, Compendium of reference methods for GMO analysis. 2011 EUR 24526 EN
24. Mackay J., Landt O., Hilario E., Mackay J., Real-time PCR fluorescent chemistries. Protocols for Nucleic Acid Analysis by Nonradioactive Probes 2007 2nd Totwa, NJ, USA Humana Press 237 261 Methods in Molecular Biology (Pubitemid 350183281)
25. Gašparič M. B., Cankar K., Žel J., Gruden K., Comparison of different real-time PCR chemistries and their suitability for detection and quantification of genetically modified organisms. BMC Biotechnology 2008 8, article 26 2-s2.0-42249106845 10.1186/1472-6750-8-26 (Pubitemid 351546722)
26. Gašparič M. B., Tengs T., La Paz J. L., Holst-Jensen A., Pla M., Esteve T., Žel J., Gruden K., Comparison of nine different real-time PCR chemistries for qualitative and quantitative applications in GMO detection. Analytical and Bioanalytical Chemistry 2010 396 6 2023 2029 2-s2.0-77951295591 10.1007/s00216-009-3418-0
27. Life Technologies, TaqMan and SYBR Green Chemistries.
28. Barbau-Piednoir E., Lievens A., Mbongolo-Mbella G., Roosens N., Sneyers M., Leunda-Casi A., van den Bulcke M., SYBR Green qPCR screening methods for the presence of 35S promoter and NOS terminator elements in food and feed products. European Food Research and Technology 2010 230 3 383 393 2-s2.0-72749124186 10.1007/s00217-009-1170-5
29. Jiang L., Yang L., Rao J., Guo J., Wang S., Liu J., Leeb S., Zhanga D., Development and in-house validation of the event-specific qualitative and quantitative PCR detection methods for genetically modified cotton MON15985. Journal of the Science of Food and Agriculture 2010 90 3 402 408 2-s2.0-73349107814 10.1002/jsfa.3829
30. Baeumler S., Wulff D., Tagliani L., Song P., A real-time quantitative PCR detection method specific to widestrike transgenic cotton (Event 281-24-236/3006-210-23). Journal of Agricultural and Food Chemistry 2006 54 18 6527 6534 2-s2.0-33748898075 10.1021/jf0610357 (Pubitemid 44426925)
31. European Union Reference Laboratory for GM Food and Feed, Feed, Event-specific method for the quantification of sugar beet line H7-1 using Real-time PCR: protocol. 2006 CRLVL28/04VP
32. Dörries H. H., Remus I., Grönewald A., Grönewald C., Berghof-Jäger K., Development of a qualitative, multiplex real-time PCR kit for screening of genetically modified organisms (GMOs). Analytical and Bioanalytical Chemistry 2010 396 6 2043 2054 2-s2.0-77951296860 10.1007/s00216-009-3149-2
33. Lu I. J., Lin C. H., Pan T. M., Establishment of a system based on universal multiplex-PCR for screening genetically modified crops. Analytical and Bioanalytical Chemistry 2010 396 6 2055 2064 2-s2.0-77951298545 10.1007/s00216-009-3214-x
34. Bahrdt C., Krech A. B., Wurz A., Wulff D., Validation of a newly developed hexaplex real-time PCR assay for screening for presence of GMOs in food, feed and seed. Analytical and Bioanalytical Chemistry 2010 396 6 2103 2112 2-s2.0-77951296916 10.1007/s00216-009-3380-x
35. Guo J., Yang L., Chen L., Morisset D., Li X., Pan L., Zhang D., MPIC: a high-throughput analytical method for multiple DNA targets. Analytical Chemistry 2011 83 5 1579 1586 2-s2.0-79952159591 10.1021/ac103266w
36. Hamels S., Glouden T., Gillard K., Mazzara M., Debode F., Foti N., Sneyers M., Nuez T. E., Pla M., Berben G., Moens W., Bertheau Y., Audéon C., Van Den Eede G., Remacle J., A PCR-microarray method for the screening of genetically modified organisms. European Food Research and Technology 2009 228 4 531 541 2-s2.0-58849129678 10.1007/s00217-008-0960-5
37. Nadal A., Esteve T., Pla M., Multiplex polymerase chain reaction-capillary gel electrophoresis: a promising tool for gmo screening-assay for simultaneous detection of five genetically modified cotton events and species. Journal of AOAC International 2009 92 3 765 772 2-s2.0-68349088098
38. Holst-Jensen A., Bertheau Y., de Loose M., Detecting un-authorized genetically modified organisms (GMOs) and derived materials. Biotechnology Advances. In press 10.1016/j.biotechadv.2012.01.024
39. Odell J. T., Nagy F., Chua N. H., Identification of DNA sequences required for activity of the cauliflower mosaic virus 35S promoter. Nature 1985 313 6005 810 812 2-s2.0-0021919918 (Pubitemid 15130834)
40. Depicker A., Stachel S., Dhaese P., Nopaline synthase: transcript mapping and DNA sequence. Journal of Molecular and Applied Genetics 1982 1 6 561 573 2-s2.0-0020406695 (Pubitemid 13150004)
41. Wehrmann A., Van Vliet A., Opsomer C., Botterman J., Schulz A., The similarities of bar and pat gene products make them equally applicable for plant engineers. Nature Biotechnology 1996 14 10 1274 1278 2-s2.0-0029763582 (Pubitemid 26332789)
42. Kishore G., Shah D., Padgette S., American Chemical Society, Hedin P. A., Menn J. J., Hollingworth R. M., 5-enolpyruvylshikimate 3-phosphate synthase. Biochemistry to Genetic Engineering of Glyphosate Tolerance 1988 37 48
43. Padgette S. R., Re D. B., Barry G. F., New weed control opportunities: development of soybeans with a Roundup Ready gene. Herbicide-Resistant Crops: Agricultural, Environmental, Economic, Regulatory, and Technical Aspects 1996 53 84
44. Sanger M., Daubert S., Goodman R. M., Characteristics of a strong promoter from figwort mosaic virus: comparison with the analogous 35S promoter from cauliflower mosaic virus and the regulated mannopine synthase promoter. Plant Molecular Biology 1990 14 3 433 443 2-s2.0-0025400544 10.1007/BF00028779
45. McElroy D., Zhang W., Cao J., Wu R., Isolation of an efficient actin promoter for use in rice transformation. The Plant Cell 1990 2 2 163 171 2-s2.0-0025376570 (Pubitemid 120029577)
46. Christensen A. H., Sharrock R. A., Quail P. H., Maize polyubiquitin genes: structure, thermal perturbation of expression and transcript splicing, and promoter activity following transfer to protoplasts by electroporation. Plant Molecular Biology 1992 18 4 675 689 2-s2.0-0026816010 10.1007/BF00020010
47. Gonsalves D., Transgenic papaya in Hawaii and beyond. AgBioForum 2004 7 1-2 36 40 2-s2.0-8744272414 (Pubitemid 39526764)
48. Cai W., Gonsalves C., Tennant P., Fermin G., Souza M., Sarindu N., Jan F. J., Zhu H. Y., Gonsalves D., A protocol for efficient transformation and regeneration of Carica papaya L. In Vitro Cellular and Developmental Biology 1999 35 1 61 69 2-s2.0-0344178051 (Pubitemid 29111884)
49. Tennant P. F., Ahmad M. H., Gonsalves D., Transformation of Carica papaya L. with virus coat protein genes for studies on resistance to Papaya ringspot virus from Jamaica. Tropical Agriculture 2002 79 2 105 113 2-s2.0-0036556594 (Pubitemid 36117493)
50. Acciarri N., Vitelli G., Arpaia S., Mennella G., Sunseri F., Rotino G. L., Transgenic resistance to the Colorado potato beetle in Bt-expressing eggplant fields. HortScience 2000 35 4 722 725 2-s2.0-0033915822 (Pubitemid 30495836)
51. Koehorst-van Putten H. J. J., Sudarmonowati E., Herman M., Pereira-Bertram I. J., Wolters A. M. A., Meima H., de Vetten N., Raemakers C. J. J. M., Visser R. G. F., Field testing and exploitation of genetically modified cassava with low-amylose or amylose-free starch in Indonesia. Transgenic Research 2012 21 1 39 50 2-s2.0-79953255946 10.1007/s11248-011-9507-9
52. Sriroth K., Piyachomkwan K., Santisopasri V., Oates C. G., Environmental conditions during root development: drought constraint on cassava starch quality. Euphytica 2001 120 1 95 101 2-s2.0-0034898501 10.1023/A:1017511806128 (Pubitemid 32736236)
53. Taverniers I., Papazova N., Bertheau Y., De Loose M., Holst-Jensen A., Gene stacking in transgenic plants: towards compliance between definitions, terminology, and detection within the EU regulatory framework. Environmental Biosafety Research 2008 7 4 197 218 2-s2.0-58149117589 10.1051/ebr:2008018
54. OECD, OECD Guidance for the Designation of a Unique Identifier for transgenic plants 2002 23
55. Ye X., Al-Babili S., Klöti A., Engineering the provitamin A (β -carotene) biosynthetic pathway into (carotenoid-free) rice endosperm. Science 2000 287 5451 303 305 2-s2.0-0033983338 10.1126/science.287.5451.303 (Pubitemid 30046756)
56. Beyer P., Golden Rice and Golden crops for human nutrition. New Biotechnology 2010 27 5 478 481 2-s2.0-78649519656 10.1016/j.nbt.2010.05.010
57. Dow AgroSciences,.
58. Lusser M., Parisi C., Plan D., New plant breedings techniques. State-of-the-art and prospects for commercial development. European Commisson 2011 EUR 24760 EN
59. Bruderer S., Leitner K. E., Lindenmeyer J., Genetically Modified (GM) Crops: Molecular and Regulatory Details 2003 BATS, Centre for Biosafety and Sustainability
60. Waiblinger H. U., Ernst B., Anderson A., Pietsch K., Validation and collaborative study of a P35S and T-nos duplex real-time PCR screening method to detect genetically modified organisms in food products. European Food Research and Technology 2008 226 5 1221 1228 2-s2.0-38949187855 10.1007/s00217-007-0748-z (Pubitemid 351214732)
61. Fernandez S., Charles-Delobel C., Geldreich A., Berthier G., Boyer F., Collonnier C., Coué-Philippe G., Diolez A., Duplan M., Kebdani N., Romaniuk M., Feinberg M., Bertheau Y., Quantification of the 35S promoter in DNA extracts from genetically modified organisms using real-time polymerase chain reaction and specificity assessment on various genetically modified organisms, part I: operating procedure. Journal of AOAC International 2005 88 2 547 557 2-s2.0-20144387495 (Pubitemid 40479412)
62. Höhne M., Santisi C. R., Meyer R., Real-time multiplex PCR: an accurate method for the detection and quantification of 35S-CaMV promoter in genetically modified maize-containing food. European Food Research and Technology 2002 215 1 59 64 2-s2.0-10044292473 10.1007/s00217-002-0503-4
63. Corbisier P., Trapmann S., Gancberg D., Hannes L., Van Iwaarden P., Berben G., Schimmel H., Emons H., Quantitative determination of Roundup Ready soybean (Glycine max) extracted from highly processed flour. Analytical and Bioanalytical Chemistry 2005 383 2 282 290 2-s2.0-26644444367 10.1007/s00216-005-0013-x (Pubitemid 41442920)
64. Reiting R., Broll H., Waiblinger H. U., Grohmann L., Collaborative study of a T-nos real-time PCR method for screening of genetically modified organisms in food products. Journal für Verbraucherschutz und Lebensmittelsicherheit 2007 2 2 116 121 2-s2.0-34250195786 10.1007/s00003-007-0189-4 (Pubitemid 46902909)
65. Barbau-Piednoir E., Lievens A., Vandermassen E., Four new SYBR Green qPCR screening methods for the detection of Roundup Ready, LibertyLink, and CryIAb traits in genetically modified products. European Food Research and Technology 2012 234 1 13 23
66. Grohmann L., Nieweler C. B., Nemeth A., Waiblinger H. U., Collaborative trial validation studies of real-time PCR-based GMO Screening methods for detection of the bar gene and the ctp2-cp4epsps construct. Journal of Agricultural and Food Chemistry 2009 57 19 8913 8920 2-s2.0-70349906741 10.1021/jf901598r
67. Dinon A. Z., Prins T. W., Van Dijk J. P., Arisi A. C. M., Scholtens I. M. J., Kok E. J., Development and validation of real-time PCR screening methods for detection of cry1A.105 and cry2Ab2 genes in genetically modified organisms. Analytical and Bioanalytical Chemistry 2011 400 5 1433 1442 2-s2.0-79955565637 10.1007/s00216-011-4875-9
68. Van den Bulcke M., Lievens A., Barbau-Piednoir E., Mbongolombella G., Roosens N., Sneyers M., Casi A. L., A theoretical introduction to combinatory SYBR Green qPCR Screening a matrix-based approach for the detection of materials derived from genetically modified plants. Analytical and Bioanalytical Chemistry 2010 396 6 2113 2123 2-s2.0-77951297303 10.1007/s00216-009-3286-7
69. Broeders S., Papazova N., Van den Bulcke M., Hernández- Rodríguez P., Gome A. P. R., Development of a molecular platform for GMO detection in food and feed on the basis of, combinatory qPCR technology. Polymerase Chain Reaction 2012 1 Rijeka, Croatia InTech 363 404
70. Mbongolo Mbella E. G., Lievens A., Barbau-Piednoir E., Sneyers M., Leunda-Casi A., Roosens N., Van den Bulcke M., SYBR Green qPCR methods for detection of endogenous reference genes in commodity crops: a step ahead in combinatory screening of genetically modified crops in food and feed products. European Food Research and Technology 2011 232 3 485 496 2-s2.0-79952008363 10.1007/s00217-010-1408-2
71. Vaïtilingom M., Pijnenburg H., Gendre F., Brignon P., Real-time quantitative PCR detection of genetically modified maximizer maize and roundup ready soybean in some representative foods. Journal of Agricultural and Food Chemistry 1999 47 12 5261 5266 2-s2.0-0043042112 10.1021/jf981208v (Pubitemid 30016972)
72. Yang L., Chen J., Huang C., Liu Y., Jia S., Pan L., Zhang D., Validation of a cotton-specific gene, Sad1, used as an endogenous reference gene in qualitative and real-time quantitative PCR detection of transgenic cottons. The Plant Cell Reports 2005 24 4 237 245 2-s2.0-21444433034 10.1007/s00299-005-0929- 9 (Pubitemid 40912347)
73. Broeders S., Barbau-Piednoir E., Vandermassen E., Debode F., Mazzara M., Roosens N., New SYBRGreen methods targeting promoter sequences used for screening of several GM events pending for authorisation in Europe. submitted
74. European Parliament, Regulation (EC) No 1829/2003 of the European Parliament and of the Council of 22 September 2003 on genetically modified food and feed. Official Journal of the European Union 2003 L 268 1 23
75. European Commission, Commission Regulation (EU) No 619/2011 of 24 June 2011 laying down the methods of sampling and analysis for the official control of feed as regards presence of genetically modified material for which an authorisation procedure is pending or the authorisation of which has expired. Official Journal of the European Union 2011 L166 9 15
76. Ruttink T., Demeyer R., Van Gulck E., Van Droogenbroeck B., Querci M., Taverniers I., De Loose M., Molecular toolbox for the identification of unknown genetically modified organisms. Analytical and Bioanalytical Chemistry 2010 396 6 2073 2089 2-s2.0-77951297194 10.1007/s00216-009-3287-6
77. Thirulogachandar V., Pandey P., Vaishnavi C. S., Reddy M. K., An affinity-based genome walking method to find transgene integration loci in transgenic genome. Analytical Biochemistry 2011 416 2 196 201 2-s2.0-79959408479 10.1016/j.ab.2011.05.021
78. GAO, Genetically engineered crops. Agencies are proposing changes to improve oversight, but could take additional steps to enhance coordination and monitoring. Report 2008 GAO-09-60 United States Government Accountability Office
79. Akiyama H., Watanabe T., Wakabayashi K., Nakade S., Yasui S., Sakata K., Chiba R., Spiegelhalter F., Hino A., Maitani T., Quantitative detection system for maize sample containing combined-trait genetically modified maize. Analytical Chemistry 2005 77 22 7421 7428 2-s2.0-27944477356 10.1021/ac051236u (Pubitemid 41681412)
80. Vossen R. H. A. M., Aten E., Roos A., Den Dunnen J. T., High-resolution melting analysis (HRMA)more than just sequence variant screening. Human Mutation 2009 30 6 860 866 2-s2.0-66349090454 10.1002/humu.21019
81. Gady A. L. F., Hermans F. W. K., Van de Wal M. H. B. J., van Loo E. N., Visser R. G. F., Bachem C. W. B., Implementation of two high through-put techniques in a novel application: detecting point mutations in large EMS mutated plant populations. Plant Methods 2009 5 1, article 13 2-s2.0-70350263714 10.1186/1746-4811-5-13
82. Directive 2001/18/EC of the European Parliament and of the Council of 12 March 2001 on the deliberate release into the environment of genetically modified organisms and repealing Council Directive 90/220/EEC. Official Journal of the European Union 2001 L 106 1 38