메뉴 건너뛰기




Volumn 13, Issue , 2012, Pages

Evaluation of reference genes for real-time quantitative PCR studies in Candida glabrata following azole treatment

Author keywords

Azole resistance gene; Candida glabrata; Fluconazole; hkgFinder; Housekeeping gene; Reference gene; RT qPCR

Indexed keywords

FLUCONAZOLE; MESSENGER RNA; RIBOSOME RNA; RNA 18S; RNA 28S;

EID: 84867981243     PISSN: None     EISSN: 14712199     Source Type: Journal    
DOI: 10.1186/1471-2199-13-22     Document Type: Article
Times cited : (77)

References (59)
  • 1
    • 77955409771 scopus 로고    scopus 로고
    • Microarray and molecular analyses of the azole resistance mechanism in Candida glabrata oropharyngeal isolates
    • 10.1128/AAC.00535-10, 2916311, 20547810
    • Tsai HF, Sammons LR, Zhang X, Suffis SD, Su Q, Myers TG, Marr KA, Bennett JE. Microarray and molecular analyses of the azole resistance mechanism in Candida glabrata oropharyngeal isolates. Antimicrob Agents Chemother 2010, 54:3308-3317. 10.1128/AAC.00535-10, 2916311, 20547810.
    • (2010) Antimicrob Agents Chemother , vol.54 , pp. 3308-3317
    • Tsai, H.F.1    Sammons, L.R.2    Zhang, X.3    Suffis, S.D.4    Su, Q.5    Myers, T.G.6    Marr, K.A.7    Bennett, J.E.8
  • 2
    • 21344458602 scopus 로고    scopus 로고
    • Quantitative real-time RT-PCR-a perspective
    • 10.1677/jme.1.01755, 15956331
    • Bustin SA, Benes V, Nolan T, Pfaffl MW. Quantitative real-time RT-PCR-a perspective. J Mol Endocrinol 2005, 34:597-601. 10.1677/jme.1.01755, 15956331.
    • (2005) J Mol Endocrinol , vol.34 , pp. 597-601
    • Bustin, S.A.1    Benes, V.2    Nolan, T.3    Pfaffl, M.W.4
  • 4
    • 43249099500 scopus 로고    scopus 로고
    • Twenty-five years of quantitative PCR for gene expression analysis
    • 10.2144/000112776, 18474036
    • VanGuilder HD, Vrana KE, Freeman WM. Twenty-five years of quantitative PCR for gene expression analysis. Biotechniques 2008, 44:619-626. 10.2144/000112776, 18474036.
    • (2008) Biotechniques , vol.44 , pp. 619-626
    • VanGuilder, H.D.1    Vrana, K.E.2    Freeman, W.M.3
  • 5
    • 24944534978 scopus 로고    scopus 로고
    • Real-time PCR for mRNA quantitation
    • 10.2144/05391RV01, 16060372
    • Wong ML, Medrano JF. Real-time PCR for mRNA quantitation. Biotechniques 2005, 39:75-85. 10.2144/05391RV01, 16060372.
    • (2005) Biotechniques , vol.39 , pp. 75-85
    • Wong, M.L.1    Medrano, J.F.2
  • 6
    • 0033775615 scopus 로고    scopus 로고
    • Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays
    • 10.1677/jme.0.0250169, 11013345
    • Bustin SA. Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays. J Mol Endocrinol 2000, 25:169-193. 10.1677/jme.0.0250169, 11013345.
    • (2000) J Mol Endocrinol , vol.25 , pp. 169-193
    • Bustin, S.A.1
  • 7
    • 0035710229 scopus 로고    scopus 로고
    • An overview of real-time quantitative PCR: applications to quantify cytokine gene expression
    • 10.1006/meth.2001.1261, 11846608
    • Giulietti A, Overbergh L, Valckx D, Decallonne B, Bouillon R, Mathieu C. An overview of real-time quantitative PCR: applications to quantify cytokine gene expression. Methods 2001, 25:386-401. 10.1006/meth.2001.1261, 11846608.
    • (2001) Methods , vol.25 , pp. 386-401
    • Giulietti, A.1    Overbergh, L.2    Valckx, D.3    Decallonne, B.4    Bouillon, R.5    Mathieu, C.6
  • 8
    • 0346728757 scopus 로고    scopus 로고
    • Guideline to reference gene selection for quantitative real-time PCR
    • 10.1016/j.bbrc.2003.11.177, 14706621
    • Radonic A, Thulke S, Mackay IM, Landt O, Siegert W, Nitsche A. Guideline to reference gene selection for quantitative real-time PCR. Biochem Biophys Res Commun 2004, 313:856-862. 10.1016/j.bbrc.2003.11.177, 14706621.
    • (2004) Biochem Biophys Res Commun , vol.313 , pp. 856-862
    • Radonic, A.1    Thulke, S.2    Mackay, I.M.3    Landt, O.4    Siegert, W.5    Nitsche, A.6
  • 9
    • 0037129827 scopus 로고    scopus 로고
    • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
    • 126239, 12184808
    • Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, De Paepe A, Speleman F. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 2002, 3:RESEARCH0034. www.biogazelle.com/genormplus/, 126239, 12184808.
    • (2002) Genome Biol , vol.3
    • Vandesompele, J.1    De Preter, K.2    Pattyn, F.3    Poppe, B.4    Van Roy, N.5    De Paepe, A.6    Speleman, F.7
  • 12
    • 0036729454 scopus 로고    scopus 로고
    • Beta-Actin and GAPDH housekeeping gene expression in asthmatic airways is variable and not suitable for normalising mRNA levels
    • 10.1136/thorax.57.9.765, 1746418, 12200519
    • Glare EM, Divjak M, Bailey MJ, Walters EH. beta-Actin and GAPDH housekeeping gene expression in asthmatic airways is variable and not suitable for normalising mRNA levels. Thorax 2002, 57:765-770. 10.1136/thorax.57.9.765, 1746418, 12200519.
    • (2002) Thorax , vol.57 , pp. 765-770
    • Glare, E.M.1    Divjak, M.2    Bailey, M.J.3    Walters, E.H.4
  • 13
    • 21244499405 scopus 로고    scopus 로고
    • GAPDH as a housekeeping gene: analysis of GAPDH mRNA expression in a panel of 72 human tissues
    • 10.1152/physiolgenomics.00025.2005, 15769908
    • Barber RD, Harmer DW, Coleman RA, Clark BJ. GAPDH as a housekeeping gene: analysis of GAPDH mRNA expression in a panel of 72 human tissues. Physiol Genomics 2005, 21:389-395. 10.1152/physiolgenomics.00025.2005, 15769908.
    • (2005) Physiol Genomics , vol.21 , pp. 389-395
    • Barber, R.D.1    Harmer, D.W.2    Coleman, R.A.3    Clark, B.J.4
  • 15
    • 0033575003 scopus 로고    scopus 로고
    • Direct comparison of GAPDH, beta-actin, cyclophilin, and 28S rRNA as internal standards for quantifying RNA levels under hypoxia
    • 10.1006/bbrc.1999.0815, 10364451
    • Zhong H, Simons JW. Direct comparison of GAPDH, beta-actin, cyclophilin, and 28S rRNA as internal standards for quantifying RNA levels under hypoxia. Biochem Biophys Res Commun 1999, 259:523-526. 10.1006/bbrc.1999.0815, 10364451.
    • (1999) Biochem Biophys Res Commun , vol.259 , pp. 523-526
    • Zhong, H.1    Simons, J.W.2
  • 16
    • 23644459677 scopus 로고    scopus 로고
    • Mechanical injury of cartilage explants causes specific time-dependent changes in chondrocyte gene expression
    • 10.1002/art.21215, 16052587
    • Lee JH, Fitzgerald JB, Dimicco MA, Grodzinsky AJ. Mechanical injury of cartilage explants causes specific time-dependent changes in chondrocyte gene expression. Arthritis Rheum 2005, 52:2386-2395. 10.1002/art.21215, 16052587.
    • (2005) Arthritis Rheum , vol.52 , pp. 2386-2395
    • Lee, J.H.1    Fitzgerald, J.B.2    Dimicco, M.A.3    Grodzinsky, A.J.4
  • 18
    • 0034694128 scopus 로고    scopus 로고
    • Effect of experimental treatment on housekeeping gene expression: validation by real-time, quantitative RT-PCR
    • 10.1016/S0165-022X(00)00129-9, 11086195
    • Schmittgen TD, Zakrajsek BA. Effect of experimental treatment on housekeeping gene expression: validation by real-time, quantitative RT-PCR. J Biochem Biophys Methods 2000, 46:69-81. 10.1016/S0165-022X(00)00129-9, 11086195.
    • (2000) J Biochem Biophys Methods , vol.46 , pp. 69-81
    • Schmittgen, T.D.1    Zakrajsek, B.A.2
  • 19
    • 3142615272 scopus 로고    scopus 로고
    • Validation of housekeeping genes for normalizing RNA expression in real-time PCR
    • 116, 118-119
    • Dheda K, Huggett JF, Bustin SA, Johnson MA, Rook G, Zumla A. Validation of housekeeping genes for normalizing RNA expression in real-time PCR. Biotechniques 2004, 37:112-114. 116, 118-119.
    • (2004) Biotechniques , vol.37 , pp. 112-114
    • Dheda, K.1    Huggett, J.F.2    Bustin, S.A.3    Johnson, M.A.4    Rook, G.5    Zumla, A.6
  • 20
    • 0034720002 scopus 로고    scopus 로고
    • Comparison of human adult and fetal expression and identification of 535 housekeeping/maintenance genes
    • Warrington JA, Nair A, Mahadevappa M, Tsyganskaya M. Comparison of human adult and fetal expression and identification of 535 housekeeping/maintenance genes. Physiol Genomics 2000, 2:143-147.
    • (2000) Physiol Genomics , vol.2 , pp. 143-147
    • Warrington, J.A.1    Nair, A.2    Mahadevappa, M.3    Tsyganskaya, M.4
  • 21
    • 0037792045 scopus 로고    scopus 로고
    • Validation of endogenous controls for gene expression analysis in microdissected human renal biopsies
    • 10.1046/j.1523-1755.2003.00074.x, 12787429
    • Schmid H, Cohen CD, Henger A, Irrgang S, Schlondorff D, Kretzler M. Validation of endogenous controls for gene expression analysis in microdissected human renal biopsies. Kidney Int 2003, 64:356-360. 10.1046/j.1523-1755.2003.00074.x, 12787429.
    • (2003) Kidney Int , vol.64 , pp. 356-360
    • Schmid, H.1    Cohen, C.D.2    Henger, A.3    Irrgang, S.4    Schlondorff, D.5    Kretzler, M.6
  • 22
    • 0033983951 scopus 로고    scopus 로고
    • Variation in epidermal housekeeping gene expression in different pathological states
    • 10.1080/000155500750012397, 10721821
    • Wu YY, Rees JL. Variation in epidermal housekeeping gene expression in different pathological states. Acta Derm Venereol 2000, 80:2-3. 10.1080/000155500750012397, 10721821.
    • (2000) Acta Derm Venereol , vol.80 , pp. 2-3
    • Wu, Y.Y.1    Rees, J.L.2
  • 23
    • 0034807289 scopus 로고    scopus 로고
    • Control genes in quantitative molecular biological techniques: the variability of invariance
    • 10.1016/S1096-4959(01)00440-7, 11567890
    • Sturzenbaum SR, Kille P. Control genes in quantitative molecular biological techniques: the variability of invariance. Comp Biochem Physiol B Biochem Mol Biol 2001, 130:281-289. 10.1016/S1096-4959(01)00440-7, 11567890.
    • (2001) Comp Biochem Physiol B Biochem Mol Biol , vol.130 , pp. 281-289
    • Sturzenbaum, S.R.1    Kille, P.2
  • 24
    • 0036265158 scopus 로고    scopus 로고
    • Quantitative assessment of gene expression in highly purified hematopoietic cells using real-time reverse transcriptase polymerase chain reaction
    • 10.1016/S0301-472X(02)00787-7, 12031655
    • Raaijmakers MH, van Emst L, de Witte T, Mensink E, Raymakers RA. Quantitative assessment of gene expression in highly purified hematopoietic cells using real-time reverse transcriptase polymerase chain reaction. Exp Hematol 2002, 30:481-487. 10.1016/S0301-472X(02)00787-7, 12031655.
    • (2002) Exp Hematol , vol.30 , pp. 481-487
    • Raaijmakers, M.H.1    van Emst, L.2    de Witte, T.3    Mensink, E.4    Raymakers, R.A.5
  • 25
    • 0035161457 scopus 로고    scopus 로고
    • Unsuitability of using ribosomal RNA as loading control for Northern blot analyses related to the imbalance between messenger and ribosomal RNA content in rat mammary tumors
    • 10.1006/abio.2000.4889, 11141312
    • Solanas M, Moral R, Escrich E. Unsuitability of using ribosomal RNA as loading control for Northern blot analyses related to the imbalance between messenger and ribosomal RNA content in rat mammary tumors. Anal Biochem 2001, 288:99-102. 10.1006/abio.2000.4889, 11141312.
    • (2001) Anal Biochem , vol.288 , pp. 99-102
    • Solanas, M.1    Moral, R.2    Escrich, E.3
  • 26
    • 3442876969 scopus 로고    scopus 로고
    • Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets
    • 10.1158/0008-5472.CAN-04-0496, 15289330
    • Andersen CL, Jensen JL, Orntoft TF. Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Res 2004, 64:5245-5250. http://www.mdl.dk/publicationsnormfinder.htm, 10.1158/0008-5472.CAN-04-0496, 15289330.
    • (2004) Cancer Res , vol.64 , pp. 5245-5250
    • Andersen, C.L.1    Jensen, J.L.2    Orntoft, T.F.3
  • 27
    • 84856016873 scopus 로고    scopus 로고
    • Reference gene selection for quantitative real-time PCR in chrysanthemum subjected to biotic and abiotic stress
    • 10.1007/s12033-011-9394-6, 21416201
    • Gu C, Chen S, Liu Z, Shan H, Luo H, Guan Z, Chen F. Reference gene selection for quantitative real-time PCR in chrysanthemum subjected to biotic and abiotic stress. Mol Biotechnol 2011, 49:192-197. 10.1007/s12033-011-9394-6, 21416201.
    • (2011) Mol Biotechnol , vol.49 , pp. 192-197
    • Gu, C.1    Chen, S.2    Liu, Z.3    Shan, H.4    Luo, H.5    Guan, Z.6    Chen, F.7
  • 28
    • 77950946491 scopus 로고    scopus 로고
    • Selection of reference genes for quantitative gene expression normalization in flax (Linum usitatissimum L.)
    • 10.1186/1471-2229-10-71, 3095345, 20403198
    • Huis R, Hawkins S, Neutelings G. Selection of reference genes for quantitative gene expression normalization in flax (Linum usitatissimum L.). BMC Plant Biol 2010, 10:71. 10.1186/1471-2229-10-71, 3095345, 20403198.
    • (2010) BMC Plant Biol , vol.10 , pp. 71
    • Huis, R.1    Hawkins, S.2    Neutelings, G.3
  • 29
    • 77955615600 scopus 로고    scopus 로고
    • Selection of housekeeping genes for use in quantitative reverse transcription PCR assays on the murine cornea
    • 2893048, 20596249
    • Ren S, Zhang F, Li C, Jia C, Li S, Xi H, Zhang H, Yang L, Wang Y. Selection of housekeeping genes for use in quantitative reverse transcription PCR assays on the murine cornea. Mol Vis 2010, 16:1076-1086. 2893048, 20596249.
    • (2010) Mol Vis , vol.16 , pp. 1076-1086
    • Ren, S.1    Zhang, F.2    Li, C.3    Jia, C.4    Li, S.5    Xi, H.6    Zhang, H.7    Yang, L.8    Wang, Y.9
  • 30
    • 0035423813 scopus 로고    scopus 로고
    • Ribosomal 18 S RNA prevails over glyceraldehyde-3-phosphate dehydrogenase and beta-actin genes as internal standard for quantitative comparison of mRNA levels in invasive and noninvasive human melanoma cell subpopulations
    • 10.1006/abio.2001.5171, 11476540
    • Goidin D, Mamessier A, Staquet MJ, Schmitt D, Berthier-Vergnes O. Ribosomal 18 S RNA prevails over glyceraldehyde-3-phosphate dehydrogenase and beta-actin genes as internal standard for quantitative comparison of mRNA levels in invasive and noninvasive human melanoma cell subpopulations. Anal Biochem 2001, 295:17-21. 10.1006/abio.2001.5171, 11476540.
    • (2001) Anal Biochem , vol.295 , pp. 17-21
    • Goidin, D.1    Mamessier, A.2    Staquet, M.J.3    Schmitt, D.4    Berthier-Vergnes, O.5
  • 31
    • 18044374087 scopus 로고    scopus 로고
    • Housekeeping gene expression during fetal brain development in the rat-validation by semi-quantitative RT-PCR
    • Al-Bader MD, Al-Sarraf HA. Housekeeping gene expression during fetal brain development in the rat-validation by semi-quantitative RT-PCR. Brain Res Dev Brain Res 2005, 156:38-45.
    • (2005) Brain Res Dev Brain Res , vol.156 , pp. 38-45
    • Al-Bader, M.D.1    Al-Sarraf, H.A.2
  • 32
    • 15544374615 scopus 로고    scopus 로고
    • Reference gene selection for quantitative real-time PCR analysis in virus infected cells: SARS corona virus, Yellow fever virus, Human Herpesvirus-6. Camelpox virus and Cytomegalovirus infections
    • 10.1186/1743-422X-2-7, 549079, 15705200
    • Radonic A, Thulke S, Bae HG, Muller MA, Siegert W, Nitsche A. Reference gene selection for quantitative real-time PCR analysis in virus infected cells: SARS corona virus, Yellow fever virus, Human Herpesvirus-6. Camelpox virus and Cytomegalovirus infections. Virol J 2005, 2:7. 10.1186/1743-422X-2-7, 549079, 15705200.
    • (2005) Virol J , vol.2 , pp. 7
    • Radonic, A.1    Thulke, S.2    Bae, H.G.3    Muller, M.A.4    Siegert, W.5    Nitsche, A.6
  • 33
    • 16844379879 scopus 로고    scopus 로고
    • Standardization strategy for quantitative PCR in human seminoma and normal testis
    • 10.1016/j.jbiotec.2005.01.011, 15823405
    • Neuvians TP, Gashaw I, Sauer CG, von Ostau C, Kliesch S, Bergmann M, Hacker A, Grobholz R. Standardization strategy for quantitative PCR in human seminoma and normal testis. J Biotechnol 2005, 117:163-171. 10.1016/j.jbiotec.2005.01.011, 15823405.
    • (2005) J Biotechnol , vol.117 , pp. 163-171
    • Neuvians, T.P.1    Gashaw, I.2    Sauer, C.G.3    von Ostau, C.4    Kliesch, S.5    Bergmann, M.6    Hacker, A.7    Grobholz, R.8
  • 34
    • 4644254793 scopus 로고    scopus 로고
    • Azole resistance in Candida glabrata: coordinate upregulation of multidrug transporters and evidence for a Pdr1-like transcription factor
    • 10.1128/AAC.48.10.3773-3781.2004, 521908, 15388433
    • Vermitsky JP, Edlind TD. Azole resistance in Candida glabrata: coordinate upregulation of multidrug transporters and evidence for a Pdr1-like transcription factor. Antimicrob Agents Chemother 2004, 48:3773-3781. 10.1128/AAC.48.10.3773-3781.2004, 521908, 15388433.
    • (2004) Antimicrob Agents Chemother , vol.48 , pp. 3773-3781
    • Vermitsky, J.P.1    Edlind, T.D.2
  • 35
    • 33645773419 scopus 로고    scopus 로고
    • Candida glabrata PDR1, a transcriptional regulator of a pleiotropic drug resistance network, mediates azole resistance in clinical isolates and petite mutants
    • 10.1128/AAC.50.4.1384-1392.2006, 1426987, 16569856
    • Tsai HF, Krol AA, Sarti KE, Bennett JE. Candida glabrata PDR1, a transcriptional regulator of a pleiotropic drug resistance network, mediates azole resistance in clinical isolates and petite mutants. Antimicrob Agents Chemother 2006, 50:1384-1392. 10.1128/AAC.50.4.1384-1392.2006, 1426987, 16569856.
    • (2006) Antimicrob Agents Chemother , vol.50 , pp. 1384-1392
    • Tsai, H.F.1    Krol, A.A.2    Sarti, K.E.3    Bennett, J.E.4
  • 36
    • 2142810157 scopus 로고    scopus 로고
    • Mechanism of increased fluconazole resistance in Candida glabrata during prophylaxis
    • 10.1128/AAC.48.5.1773-1777.2004, 400565, 15105134
    • Bennett JE, Izumikawa K, Marr KA. Mechanism of increased fluconazole resistance in Candida glabrata during prophylaxis. Antimicrob Agents Chemother 2004, 48:1773-1777. 10.1128/AAC.48.5.1773-1777.2004, 400565, 15105134.
    • (2004) Antimicrob Agents Chemother , vol.48 , pp. 1773-1777
    • Bennett, J.E.1    Izumikawa, K.2    Marr, K.A.3
  • 37
    • 0033807662 scopus 로고    scopus 로고
    • Upregulation of ERG genes in Candida species by azoles and other sterol biosynthesis inhibitors
    • 10.1128/AAC.44.10.2693-2700.2000, 90137, 10991846
    • Henry KW, Nickels JT, Edlind TD. Upregulation of ERG genes in Candida species by azoles and other sterol biosynthesis inhibitors. Antimicrob Agents Chemother 2000, 44:2693-2700. 10.1128/AAC.44.10.2693-2700.2000, 90137, 10991846.
    • (2000) Antimicrob Agents Chemother , vol.44 , pp. 2693-2700
    • Henry, K.W.1    Nickels, J.T.2    Edlind, T.D.3
  • 38
    • 0036841830 scopus 로고    scopus 로고
    • Histone deacetylase inhibitors enhance Candida albicans sensitivity to azoles and related antifungals: correlation with reduction in CDR and ERG upregulation
    • 10.1128/AAC.46.11.3532-3539.2002, 128736, 12384361
    • Smith WL, Edlind TD. Histone deacetylase inhibitors enhance Candida albicans sensitivity to azoles and related antifungals: correlation with reduction in CDR and ERG upregulation. Antimicrob Agents Chemother 2002, 46:3532-3539. 10.1128/AAC.46.11.3532-3539.2002, 128736, 12384361.
    • (2002) Antimicrob Agents Chemother , vol.46 , pp. 3532-3539
    • Smith, W.L.1    Edlind, T.D.2
  • 40
    • 0037323687 scopus 로고    scopus 로고
    • Function of Candida glabrata ABC transporter gene, PDH1
    • 10.1002/yea.962, 12557277
    • Izumikawa K, Kakeya H, Tsai HF, Grimberg B, Bennett JE. Function of Candida glabrata ABC transporter gene, PDH1. Yeast 2003, 20:249-261. 10.1002/yea.962, 12557277.
    • (2003) Yeast , vol.20 , pp. 249-261
    • Izumikawa, K.1    Kakeya, H.2    Tsai, H.F.3    Grimberg, B.4    Bennett, J.E.5
  • 41
    • 67650963685 scopus 로고    scopus 로고
    • Application of a master equation for quantitative mRNA analysis using qRT-PCR
    • 10.1016/j.jbiotec.2009.06.006, 19539678
    • Liu ZL, Palmquist DE, Ma M, Liu J, Alexander NJ. Application of a master equation for quantitative mRNA analysis using qRT-PCR. J Biotechnol 2009, 143:10-16. 10.1016/j.jbiotec.2009.06.006, 19539678.
    • (2009) J Biotechnol , vol.143 , pp. 10-16
    • Liu, Z.L.1    Palmquist, D.E.2    Ma, M.3    Liu, J.4    Alexander, N.J.5
  • 42
    • 84875007373 scopus 로고    scopus 로고
    • Bioinformatics and Computational Biosciences Branch (BCBB), Office of Cyber Infrastructure and Computational Biology (OCICB), National Institute of Allergy and Infectious Disease (NIAID), National Institutes of Health (NIH), Bethesda, Maryland, USA
    • Skinner J. hkgFinder: Identify housekeeping genes and compute differential expression-User's Manual October 2011 2011, Bioinformatics and Computational Biosciences Branch (BCBB), Office of Cyber Infrastructure and Computational Biology (OCICB), National Institute of Allergy and Infectious Disease (NIAID), National Institutes of Health (NIH), Bethesda, Maryland, USA, http://exon.niaid.nih.gov/hkgFinder/.
    • (2011) hkgFinder: Identify housekeeping genes and compute differential expression-User's Manual October 2011
    • Skinner, J.1
  • 43
    • 45449087921 scopus 로고    scopus 로고
    • QBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data
    • 10.1186/gb-2007-8-2-r19, 1852402, 17291332
    • Hellemans J, Mortier G, De Paepe A, Speleman F, Vandesompele J. qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data. Genome Biol 2007, 8:R19. www.biogazelle.com/genormplus/, 10.1186/gb-2007-8-2-r19, 1852402, 17291332.
    • (2007) Genome Biol , vol.8
    • Hellemans, J.1    Mortier, G.2    De Paepe, A.3    Speleman, F.4    Vandesompele, J.5
  • 44
    • 1842483281 scopus 로고    scopus 로고
    • Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper--Excel-based tool using pair-wise correlations
    • Pfaffl MW, Tichopad A, Prgomet C, Neuvians TP. Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper--Excel-based tool using pair-wise correlations. Biotechnol Lett 2004, 26:509-515. http://gene-quantification.com/bestkeeper.html.
    • (2004) Biotechnol Lett , vol.26 , pp. 509-515
    • Pfaffl, M.W.1    Tichopad, A.2    Prgomet, C.3    Neuvians, T.P.4
  • 45
    • 0031584831 scopus 로고    scopus 로고
    • Effects of fasting on the expression of gastrin, cholecystokinin, and somatostatin genes and of various housekeeping genes in the pancreas and upper digestive tract of rats
    • 10.1006/bbrc.1997.6198, 9070905
    • Yamada H, Chen D, Monstein HJ, Hakanson R. Effects of fasting on the expression of gastrin, cholecystokinin, and somatostatin genes and of various housekeeping genes in the pancreas and upper digestive tract of rats. Biochem Biophys Res Commun 1997, 231:835-838. 10.1006/bbrc.1997.6198, 9070905.
    • (1997) Biochem Biophys Res Commun , vol.231 , pp. 835-838
    • Yamada, H.1    Chen, D.2    Monstein, H.J.3    Hakanson, R.4
  • 47
    • 0031614223 scopus 로고    scopus 로고
    • Regulation of hypoxanthine phosphoribosyltransferase, glyceraldehyde-3-phosphate dehydrogenase and beta-actin mRNA expression in porcine immune cells and tissues
    • 10.1080/10495399809525893, 9676236
    • Foss DL, Baarsch MJ, Murtaugh MP. Regulation of hypoxanthine phosphoribosyltransferase, glyceraldehyde-3-phosphate dehydrogenase and beta-actin mRNA expression in porcine immune cells and tissues. Anim Biotechnol 1998, 9:67-78. 10.1080/10495399809525893, 9676236.
    • (1998) Anim Biotechnol , vol.9 , pp. 67-78
    • Foss, D.L.1    Baarsch, M.J.2    Murtaugh, M.P.3
  • 48
    • 0037089538 scopus 로고    scopus 로고
    • Housekeeping gene variability in normal and carcinomatous colorectal and liver tissues: applications in pharmacogenomic gene expression studies
    • 10.1006/abio.2001.5570, 11950223
    • Blanquicett C, Johnson MR, Heslin M, Diasio RB. Housekeeping gene variability in normal and carcinomatous colorectal and liver tissues: applications in pharmacogenomic gene expression studies. Anal Biochem 2002, 303:209-214. 10.1006/abio.2001.5570, 11950223.
    • (2002) Anal Biochem , vol.303 , pp. 209-214
    • Blanquicett, C.1    Johnson, M.R.2    Heslin, M.3    Diasio, R.B.4
  • 50
    • 18444417714 scopus 로고    scopus 로고
    • Validation of oligonucleotide microarray data using microfluidic low-density arrays: a new statistical method to normalize real-time RT-PCR data
    • 10.2144/05385MT01, 15945375
    • Abruzzo LV, Lee KY, Fuller A, Silverman A, Keating MJ, Medeiros LJ, Coombes KR. Validation of oligonucleotide microarray data using microfluidic low-density arrays: a new statistical method to normalize real-time RT-PCR data. Biotechniques 2005, 38:785-792. 10.2144/05385MT01, 15945375.
    • (2005) Biotechniques , vol.38 , pp. 785-792
    • Abruzzo, L.V.1    Lee, K.Y.2    Fuller, A.3    Silverman, A.4    Keating, M.J.5    Medeiros, L.J.6    Coombes, K.R.7
  • 51
    • 0035061369 scopus 로고    scopus 로고
    • Relative quantitative RT-PCR to study the expression of plant nutrient transporters in arbuscular mycorrhizas
    • 10.1016/S0168-9452(00)00460-X, 11297786
    • Burleigh SH. Relative quantitative RT-PCR to study the expression of plant nutrient transporters in arbuscular mycorrhizas. Plant Sci 2001, 160:899-904. 10.1016/S0168-9452(00)00460-X, 11297786.
    • (2001) Plant Sci , vol.160 , pp. 899-904
    • Burleigh, S.H.1
  • 53
    • 0022423216 scopus 로고
    • Various rat adult tissues express only one major mRNA species from the glyceraldehyde-3-phosphate-dehydrogenase multigenic family
    • 10.1093/nar/13.5.1431, 341087, 2987824
    • Fort P, Marty L, Piechaczyk M, el Sabrouty S, Dani C, Jeanteur P, Blanchard JM. Various rat adult tissues express only one major mRNA species from the glyceraldehyde-3-phosphate-dehydrogenase multigenic family. Nucleic Acids Res 1985, 13:1431-1442. 10.1093/nar/13.5.1431, 341087, 2987824.
    • (1985) Nucleic Acids Res , vol.13 , pp. 1431-1442
    • Fort, P.1    Marty, L.2    Piechaczyk, M.3    el Sabrouty, S.4    Dani, C.5    Jeanteur, P.6    Blanchard, J.M.7
  • 54
    • 0028125811 scopus 로고
    • Comparison of glyceraldehyde-3-phosphate dehydrogenase and 28 S-ribosomal RNA gene expression as RNA loading controls for northern blot analysis of cell lines of varying malignant potential
    • 10.1006/abio.1994.1028, 8135355
    • Bhatia P, Taylor WR, Greenberg AH, Wright JA. Comparison of glyceraldehyde-3-phosphate dehydrogenase and 28 S-ribosomal RNA gene expression as RNA loading controls for northern blot analysis of cell lines of varying malignant potential. Anal Biochem 1994, 216:223-226. 10.1006/abio.1994.1028, 8135355.
    • (1994) Anal Biochem , vol.216 , pp. 223-226
    • Bhatia, P.1    Taylor, W.R.2    Greenberg, A.H.3    Wright, J.A.4
  • 55
    • 5444258598 scopus 로고    scopus 로고
    • Validating internal controls for quantitative plant gene expression studies
    • 10.1186/1471-2229-4-14, 515301, 15317655
    • Brunner AM, Yakovlev IA, Strauss SH. Validating internal controls for quantitative plant gene expression studies. BMC Plant Biol 2004, 4:14. 10.1186/1471-2229-4-14, 515301, 15317655.
    • (2004) BMC Plant Biol , vol.4 , pp. 14
    • Brunner, A.M.1    Yakovlev, I.A.2    Strauss, S.H.3
  • 56
    • 17744385367 scopus 로고    scopus 로고
    • Enzyme co-localization in pea leaf chloroplasts: glyceraldehyde-3-P dehydrogenase, triose-P isomerase, aldolase and sedoheptulose bisphosphatase
    • 10.1007/s11120-005-0790-2, 16143921
    • Anderson LE, Gatla N, Carol AA. Enzyme co-localization in pea leaf chloroplasts: glyceraldehyde-3-P dehydrogenase, triose-P isomerase, aldolase and sedoheptulose bisphosphatase. Photosynth Res 2005, 83:317-328. 10.1007/s11120-005-0790-2, 16143921.
    • (2005) Photosynth Res , vol.83 , pp. 317-328
    • Anderson, L.E.1    Gatla, N.2    Carol, A.A.3
  • 57
    • 77953715170 scopus 로고    scopus 로고
    • Regulatory mechanisms involved in the control of ubiquitin homeostasis
    • 10.1093/jb/mvq044, 20418328
    • Kimura Y, Tanaka K. Regulatory mechanisms involved in the control of ubiquitin homeostasis. J Biochem 2010, 147:793-798. 10.1093/jb/mvq044, 20418328.
    • (2010) J Biochem , vol.147 , pp. 793-798
    • Kimura, Y.1    Tanaka, K.2
  • 58
    • 0022507035 scopus 로고
    • Cyclophilin: distribution and variant properties in normal and neoplastic tissues
    • Koletsky AJ, Harding MW, Handschumacher RE. Cyclophilin: distribution and variant properties in normal and neoplastic tissues. J Immunol 1986, 137:1054-1059.
    • (1986) J Immunol , vol.137 , pp. 1054-1059
    • Koletsky, A.J.1    Harding, M.W.2    Handschumacher, R.E.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.