Micronutrient status and global DNA methylation in school-age children

Epigenetics

Volumn 7, Issue 10, 2012, Pages 1133-1141

  Perng, Wei ^a   Rozek, Laura S ^a   Mora Plazas, Mercedes ^b   Duchin, Ofra ^a   Marin, Constanza ^b   Forero, Yibby ^c   Baylin, Ana ^a   Villamor, Eduardo ^a  

^a UNIVERSITY OF MICHIGAN SCHOOL OF PUBLIC HEALTH   (United States)

^b FINUSAD   (Colombia)

^c NATIONAL INSTITUTES OF HEALTH   (United States)

Author keywords

C reactive protein; Children; Global DNA methylation; Inflammation; Line 1; Maternal BMI; Methyl donor nutrients; Socioeconomic status; Vitamin A

Indexed keywords

C REACTIVE PROTEIN; CYANOCOBALAMIN; FERRITIN; FOLIC ACID; RETINOL; TRACE ELEMENT; VASCULAR CELL ADHESION MOLECULE 1; ZINC;

ARTICLE; BODY MASS; CANCER RISK; CARDIOMETABOLIC RISK; CARDIOVASCULAR RISK; CHILD; CROSS-SECTIONAL STUDY; DISEASE ASSOCIATION; DNA METHYLATION; ERYTHROCYTE; FEMALE; FOLIC ACID BLOOD LEVEL; GENE EXPRESSION; HUMAN; MAJOR CLINICAL STUDY; MALE; NUTRITIONAL STATUS; PHYSICAL ACTIVITY; PRENATAL EXPOSURE; PRESCHOOL CHILD; SCHOOL CHILD; SOCIAL STATUS; VITAMIN BLOOD LEVEL; ZINC BLOOD LEVEL;

EID: 84867152163     PISSN: 15592294     EISSN: 15592308     Source Type: Journal    
DOI: 10.4161/epi.21915     Document Type: Article

References (48)

1. Weisenberger DJ, Campan M, Long TI, Kim M, Woods C, Fiala E, et al. Analysis of repetitive element DNA methylation by MethyLight. Nucleic Acids Res 2005; 33:6823-36. PMID:16326863; http://dx.doi.org/10.1093/nar/gki987.
2. Yang AS, Estécio MR, Doshi K, Kondo Y, Tajara EH, Issa JP. A simple method for estimating global DNA methylation using bisulfite PCR of repetitive DNA elements. Nucleic Acids Res 2004; 32:e38. PMID:14973332; http://dx.doi.org/10.1093/nar/gnh032.
3. Suter CM, Martin DI, Ward RL. Hypomethylation of L1 retrotransposons in colorectal cancer and adjacent normal tissue. Int J Colorectal Dis 2004; 19:95-101. PMID:14534800; http://dx.doi.org/10.1007/s00384-003-0539-3.
4. Cropley JE, Suter CM, Beckman KB, Martin DI. CpG methylation of a silent controlling element in the murine Avy allele is incomplete and unresponsive to methyl donor supplementation. PLoS One 2010; 5:e9055. PMID:20140227; http://dx.doi.org/10.1371/journal.pone.0009055.
5. Kim M, Long TI, Arakawa K, Wang R, Yu MC, Laird PW. DNA methylation as a biomarker for cardiovascular disease risk. PLoS One 2010; 5:e9692. PMID:20300621; http://dx.doi.org/10.1371/journal.pone.0009692.
6. Baccarelli A, Wright R, Bollati V, Litonjua A, Zanobetti A, Tarantini L, et al. Ischemic heart disease and stroke in relation to blood DNA methylation. Epidemiology 2010; 21:819-28. PMID:20805753; http://dx.doi.org/10.1097/EDE.0b013e3181f20457.
7. Zhang FF, Morabia A, Carroll J, Gonzalez K, Fulda K, Kaur M, et al. Dietary patterns are associated with levels of global genomic DNA methylation in a cancer-free population. J Nutr 2011; 141:1165-71. PMID:21525250; http://dx.doi.org/10.3945/jn.110.134536.
8. Breton CV, Byun HM, Wenten M, Pan F, Yang A, Gilliland FD. Prenatal tobacco smoke exposure affects global and gene-specific DNA methylation. Am J Respir Crit Care Med 2009; 180:462-7. PMID:19498054; http://dx.doi.org/10.1164/rccm.200901-0135OC.
9. Baccarelli A, Wright RO, Bollati V, Tarantini L, Litonjua AA, Suh HH, et al. Rapid DNA methylation changes after exposure to traffic particles. Am J Respir Crit Care Med 2009; 179:572-8. PMID:19136372; http://dx.doi.org/10.1164/rccm.200807-1097OC.
10. Dolinoy DC, Huang D, Jirtle RL. Maternal nutrient supplementation counteracts bisphenol A-induced DNA hypomethylation in early development. Proc Natl Acad Sci U S A 2007; 104:13056-61. PMID:17670942; http://dx.doi.org/10.1073/pnas.0703739104.
11. Waterland RA, Travisano M, Tahiliani KG, Rached MT, Mirza S. Methyl donor supplementation prevents transgenerational amplification of obesity. Int J Obes (Lond) 2008; 32:1373-9. PMID:18626486; http://dx.doi.org/10.1038/ijo.2008.100.
12. Jacob RA, Gretz DM, Taylor PC, James SJ, Pogribny IP, Miller BJ, et al. Moderate folate depletion increases plasma homocysteine and decreases lymphocyte DNA methylation in postmenopausal women. J Nutr 1998; 128:1204-12. PMID:9649607.
13. Rampersaud GC, Kauwell GP, Hutson AD, Cerda JJ, Bailey LB. Genomic DNA methylation decreases in response to moderate folate depletion in elderly women. Am J Clin Nutr 2000; 72:998-1003. PMID:11010943.
14. Axume J, Smith SS, Pogribny IP, Moriarty DJ, Caudill MA. Global leukocyte DNA methylation is similar in African American and Caucasian women under conditions of controlled folate intake. Epigenetics 2007; 2:66-8. PMID:17965592; http://dx.doi.org/10.4161/epi.2.1.4066.
15. Crider KS, Quinlivan EP, Berry RJ, Hao L, Li Z, Maneval D, et al. Genomic DNA methylation changes in response to folic acid supplementation in a population-based intervention study among women of reproductive age. PLoS One 2011; 6:e28144. PMID:22163281; http://dx.doi.org/10.1371/journal.pone.0028144.
16. Boeke CE, Baccarelli A, Kleinman KP, Burris HH, Litonjua AA, Rifas-Shiman SL, et al. Gestational intake of methyl donors and global LINE-1 DNA methylation in maternal and cord blood: prospective results from a folate-replete population. Epigenetics 2012; 7:253-60. PMID:22430801; http://dx.doi.org/10.4161/epi.7.3.19082.
17. Zhang FF, Santella RM, Wolff M, Kappil MA. B. S. White blood cell global methylation and IL-6 promoter methylation in association with diet and lifestyle risk factors in a cancer-free population. Epigenetics 2012; 7:606-14.
18. Cheong HS, Lee HC, Park BL, Kim H, Jang MJ, Han YM, et al. Epigenetic modification of retinoic acid-treated human embryonic stem cells. BMB Rep 2010; 43:830-5. PMID:21189161; http://dx.doi.org/10.5483/BMBRep.2010.43.12.830.
19. Castro R, Rivera I, Struys EA, Jansen EE, Ravasco P, Camilo ME, et al. Increased homocysteine and S-adenosylhomocysteine concentrations and DNA hypomethylation in vascular disease. Clin Chem 2003; 49:1292-6. PMID:12881445; http://dx.doi.org/10.1373/49.8.1292.
20. Zhang FF, Cardarelli R, Carroll J, Fulda KG, Kaur M, Gonzalez K, et al. Significant differences in global genomic DNA methylation by gender and race/ethnicity in peripheral blood. Epigenetics 2011; 6:623-9. PMID:21739720; http://dx.doi.org/10.4161/epi.6.5.15335.
21. Hansen NJ, Wylie RC, Phipps SM, Love WK, Andrews LG, Tollefsbol TO. The low-toxicity 9-cis UAB30 novel retinoid down-regulates the DNA methyltransferases and has anti-telomerase activity in human breast cancer cells. Int J Oncol 2007; 30:641-50;PMID:17273765.
22. Guilleret I, Yan P, Grange F, Braunschweig R, Bosman FT, Benhattar J. Hypermethylation of the human telomerase catalytic subunit (hTERT) gene correlates with telomerase activity. Int J Cancer 2002; 101:335-41. PMID:12209957; http://dx.doi.org/10.1002/ijc.10593.
23. Lim JS, Park SH, Jang KL. All-trans retinoic acid induces cellular senescence by up-regulating levels of p16 and p21 via promoter hypomethylation. Biochem Biophys Res Commun 2011; 412:500-5. PMID:21843507; http://dx.doi.org/10.1016/j.bbrc.2011.07.130.
24. Van Der Meer IM, De Maat MP, Hak AE, Kiliaan AJ, Del Sol AI, Van Der Kuip DA, et al. C-reactive protein predicts progression of atherosclerosis measured at various sites in the arterial tree: the Rotterdam Study. Stroke 2002; 33:2750-5. PMID:12468765; http://dx.doi.org/10.1161/01.STR.0000044168.00485.02.
25. Toprak A, Kandavar R, Toprak D, Chen W, Srinivasan S, Xu JH, et al. C-reactive protein is an independent predictor for carotid artery intima-media thickness progression in asymptomatic younger adults (from the Bogalusa Heart Study). BMC Cardiovasc Disord 2011; 11:78. PMID:22208681; http://dx.doi.org/10.1186/1471-2261-11-78.
26. Baccarelli A, Tarantini L, Wright RO, Bollati V, Litonjua AA, Zanobetti A, et al. Repetitive element DNA methylation and circulating endothelial and inflammation markers in the VA normative aging study. Epigenetics 2010; 5:5. PMID:20305373; http://dx.doi.org/10.4161/epi.5.3.11377.
27. Stenvinkel P, Karimi M, Johansson S, Axelsson J, Suliman M, Lindholm B, et al. Impact of inflammation on epigenetic DNA methylation-a novel risk factor for cardiovascular disease? J Intern Med 2007; 261:488-99. PMID:17444888; http://dx.doi.org/10.1111/j.1365-2796.2007.01777.x.
28. Frederick IO, Williams MA, Sales AE, Martin DP, Killien M. Pre-pregnancy body mass index, gestational weight gain, and other maternal characteristics in relation to infant birth weight. Matern Child Health J 2008; 12:557-67. PMID:17713848; http://dx.doi.org/10.1007/s10995-007-0276-2.
29. Kile ML, Baccarelli A, Tarantini L, Hoffman E, Wright RO, Christiani DC. Correlation of global and genespecific DNA methylation in maternal-infant pairs. PLoS One 2010; 5:e13730. PMID:21060777; http://dx.doi.org/10.1371/journal.pone.0013730.
30. Morgan HD, Santos F, Green K, Dean W, Reik W. Epigenetic reprogramming in mammals. Hum Mol Genet 2005; 14(Spec No 1):R47-58. PMID:15809273; http://dx.doi.org/10.1093/hmg/ddi114.
31. Painter RC, Roseboom TJ, Bleker OP. Prenatal exposure to the Dutch famine and disease in later life: an overview. Reprod Toxicol 2005; 20:345-52. PMID:15893910; http://dx.doi.org/10.1016/j.reprotox.2005.04.005.
32. Heijmans BT, Tobi EW, Stein AD, Putter H, Blauw GJ, Susser ES, et al. Persistent epigenetic differences associated with prenatal exposure to famine in humans. Proc Natl Acad Sci U S A 2008; 105:17046-9. PMID:18955703; http://dx.doi.org/10.1073/pnas.0806560105.
33. Tobi EW, Lumey LH, Talens RP, Kremer D, Putter H, Stein AD, et al. DNA methylation differences after exposure to prenatal famine are common and timingand sex-specific. Hum Mol Genet 2009; 18:4046-53. PMID:19656776; http://dx.doi.org/10.1093/hmg/ddp353.
34. Michels KB, Harris HR, Barault L. Birthweight, maternal weight trajectories and global DNA methylation of LINE-1 repetitive elements. PLoS One 2011; 6:e25254. PMID:21980406; http://dx.doi.org/10.1371/journal.pone.0025254.
35. Al-Sahab B, Saqib M, Hauser G, Tamim H. Prevalence of smoking during pregnancy and associated risk factors among Canadian women: a national survey. BMC Pregnancy Childbirth 2010; 10:24. PMID:20497553; http://dx.doi.org/10.1186/1471-2393-10-24.
36. Drenowatz C, Eisenmann JC, Pfeiffer KA, Welk G, Heelan K, Gentile D, et al. Influence of socio-economic status on habitual physical activity and sedentary behavior in 8-to 11-year old children. BMC Public Health 2010; 10:214. PMID:20423487; http://dx.doi.org/10.1186/1471-2458-10-214.
37. Northstone K, Emmett P. Multivariate analysis of diet in children at four and seven years of age and associations with socio-demographic characteristics. Eur J Clin Nutr 2005; 59:751-60. PMID:15841093; http://dx.doi.org/10.1038/sj.ejcn.1602136.
38. Zhang FF, Cardarelli R, Carroll J, Zhang S, Fulda KG, Gonzalez K, et al. Physical activity and global genomic DNA methylation in a cancer-free population. Epigenetics 2011; 6:293-9. PMID:21178401; http://dx.doi.org/10.4161/epi.6.3.14378.
39. Villamor E, Mora-Plazas M, Forero Y, Lopez-Arana S, Baylin A. Vitamin B-12 status is associated with socioeconomic level and adherence to an animal food dietary pattern in Colombian school children. J Nutr 2008; 138:1391-8. PMID:18567766.
40. Waterland RA, Kellermayer R, Laritsky E, Rayco-Solon P, Harris RA, Travisano M, et al. Season of conception in rural gambia affects DNA methylation at putative human metastable epialleles. PLoS Genet 2010; 6:e1001252. PMID:21203497; http://dx.doi.org/10.1371/journal.pgen.1001252.
41. Arsenault JE, Mora-Plazas M, Forero Y, López-Arana S, Marín C, Baylin A, et al. Provision of a school snack is associated with vitamin B-12 status, linear growth, and morbidity in children from Bogota, Colombia. J Nutr 2009; 139:1744-50. PMID:19587125; http://dx.doi.org/10.3945/jn.109.108662.
42. Office of the Mayor of Bogota. Estadisticas del sector educativo de Bogota 2005 y avances 2006. [Statistics of the educative sector of Bogota 2005 and advances 2006.] Secretary of Education http://wwwsedbogotaeduco/AplicativosSED/Centro_Documentacion/anexos/publicaciones_2004_2008/estadisticas_05_avances_2006pdf, 2006.
43. Lohman T, Roche A, Martorell R. Anthropometric standardization reference manual. Champaign, IL: Human Kinetics Viijs, 1988.
44. Makino T, Takahara K. Direct determination of plasma copper and zinc in infants by atomic absorption with discrete nebulization. Clin Chem 1981; 27:1445-7. PMID:7273408.
45. Tost J, Gut IG. DNA methylation analysis by pyrosequencing. Nat Protoc 2007; 2:2265-75. PMID:17853883; http://dx.doi.org/10.1038/nprot.2007.314.
46. Physical status: the use and interpretation of anthropometry. Report of a WHO Expert Committee. World Health Organ Tech Rep Ser 1995; 854:1-452. PMID:8594834.
47. de Onis M, Onyango AW, Borghi E, Siyam A, Nishida C, Siekmann J. Development of a WHO growth reference for school-aged children and adolescents. Bull World Health Organ 2007; 85:660-7. PMID:18026621; http://dx.doi.org/10.2471/BLT.07.043497.
48. Sommer A, Davidson FR; Annecy Accords. Assessment and control of vitamin A deficiency: the Annecy Accords. J Nutr 2002; 132(Suppl):2845S-50S. PMID:12221259.