-
1
-
-
0037372003
-
Epigenetic regulation of gene expression: How the genome integrates intrinsic and environmental signals
-
Jaenisch R, Bird A (2003) Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals. Nat Genet 33 Suppl: 245-254.
-
(2003)
Nat Genet
, vol.33
, Issue.SUPPL.
, pp. 245-254
-
-
Jaenisch, R.1
Bird, A.2
-
2
-
-
59149084538
-
The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores
-
Irizarry RA, Ladd-Acosta C, Wen B, Wu Z, Montano C, et al. (2009) The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores. Nat Genet 41: 178-186.
-
(2009)
Nat Genet
, vol.41
, pp. 178-186
-
-
Irizarry, R.A.1
Ladd-Acosta, C.2
Wen, B.3
Wu, Z.4
Montano, C.5
-
3
-
-
77954504873
-
Conserved role of intragenic DNA methylation in regulating alternative promoters
-
Maunakea AK, Nagarajan RP, Bilenky M, Ballinger TJ, D'Souza C, et al. (2010) Conserved role of intragenic DNA methylation in regulating alternative promoters. Nature 466: 253-257.
-
(2010)
Nature
, vol.466
, pp. 253-257
-
-
Maunakea, A.K.1
Nagarajan, R.P.2
Bilenky, M.3
Ballinger, T.J.4
D'souza, C.5
-
4
-
-
69449093363
-
Epigenetic mechanisms that underpin metabolic and cardiovascular diseases
-
Gluckman PD, Hanson MA, Buklijas T, Low FM, Beedle AS (2009) Epigenetic mechanisms that underpin metabolic and cardiovascular diseases. Nat Rev Endocrinol 5: 401-408.
-
(2009)
Nat Rev Endocrinol
, vol.5
, pp. 401-408
-
-
Gluckman, P.D.1
Hanson, M.A.2
Buklijas, T.3
Low, F.M.4
Beedle, A.S.5
-
5
-
-
35548941189
-
Epigenetic Epidemiology of the Developmental Origins Hypothesis
-
Waterland RA, Michels KB (2007) Epigenetic Epidemiology of the Developmental Origins Hypothesis. Annu Rev Nutr 27: 363-388.
-
(2007)
Annu Rev Nutr
, vol.27
, pp. 363-388
-
-
Waterland, R.A.1
Michels, K.B.2
-
6
-
-
33646193822
-
Inherited epigenetic variation-revisiting soft inheritance
-
Richards EJ (2006) Inherited epigenetic variation-revisiting soft inheritance. Nat Rev Genet 7: 395-401.
-
(2006)
Nat Rev Genet
, vol.7
, pp. 395-401
-
-
Richards, E.J.1
-
7
-
-
0032751471
-
Epigenetic inheritance at the agouti locus in the mouse [see comments]
-
Morgan HD, Sutherland HG, Martin DI, Whitelaw E (1999) Epigenetic inheritance at the agouti locus in the mouse [see comments]. NatGenet 23: 314-318.
-
(1999)
NatGenet
, vol.23
, pp. 314-318
-
-
Morgan, H.D.1
Sutherland, H.G.2
Martin, D.I.3
Whitelaw, E.4
-
8
-
-
0030776825
-
Two dominant mutations in the mouse fused gene are the result of transposon insertions
-
Vasicek TJ, Zeng L, Guan XJ, Zhang T, Costantini F, et al. (1997) Two dominant mutations in the mouse fused gene are the result of transposon insertions. Genetics 147: 777-786.
-
(1997)
Genetics
, vol.147
, pp. 777-786
-
-
Vasicek, T.J.1
Zeng, L.2
Guan, X.J.3
Zhang, T.4
Costantini, F.5
-
9
-
-
0033547260
-
Physiological consequences of ectopic agouti gene expression: The yellow obese mouse syndrome
-
Wolff GL, Roberts DW, Mountjoy KG (1999) Physiological consequences of ectopic agouti gene expression: the yellow obese mouse syndrome. Physiol Genomics 1: 151-163.
-
(1999)
Physiol Genomics
, vol.1
, pp. 151-163
-
-
Wolff, G.L.1
Roberts, D.W.2
Mountjoy, K.G.3
-
10
-
-
34548715144
-
Maternal nutrient supplementation counteracts bisphenol A-induced DNA hypomethylation in early development
-
Dolinoy DC, Huang D, Jirtle RL (2007) Maternal nutrient supplementation counteracts bisphenol A-induced DNA hypomethylation in early development. Proc Natl Acad Sci U S A 104: 13056-13061.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 13056-13061
-
-
Dolinoy, D.C.1
Huang, D.2
Jirtle, R.L.3
-
11
-
-
33749026098
-
Maternal methyl supplements increase offspring DNA methylation at Axin fused
-
Waterland RA, Dolinoy DC, Lin JR, Smith CA, Shi X, et al. (2006) Maternal methyl supplements increase offspring DNA methylation at Axin fused. Genesis 44: 401-406.
-
(2006)
Genesis
, vol.44
, pp. 401-406
-
-
Waterland, R.A.1
Dolinoy, D.C.2
Lin, J.R.3
Smith, C.A.4
Shi, X.5
-
12
-
-
0043093697
-
Transposable elements: Targets for early nutritional effects on epigenetic gene regulation
-
Waterland RA, Jirtle RL (2003) Transposable elements: targets for early nutritional effects on epigenetic gene regulation. Mol Cell Biol 23: 5293-5300.
-
(2003)
Mol Cell Biol
, vol.23
, pp. 5293-5300
-
-
Waterland, R.A.1
Jirtle, R.L.2
-
13
-
-
0032923528
-
Potential mechanisms of metabolic imprinting that lead to chronic disease
-
Waterland RA, Garza C (1999) Potential mechanisms of metabolic imprinting that lead to chronic disease. AmJClinNutr 69: 179-197.
-
(1999)
AmJClinNutr
, vol.69
, pp. 179-197
-
-
Waterland, R.A.1
Garza, C.2
-
14
-
-
67349190247
-
Linking DNA methylation and histone modification: Patterns and paradigms
-
Cedar H, Bergman Y (2009) Linking DNA methylation and histone modification: patterns and paradigms. Nat Rev Genet 10: 295-304.
-
(2009)
Nat Rev Genet
, vol.10
, pp. 295-304
-
-
Cedar, H.1
Bergman, Y.2
-
15
-
-
35948981875
-
Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters
-
doi:10.1371/journal.pgen.0030181
-
Shen L, Kondo Y, Guo Y, Zhang J, Zhang L, et al. (2007) Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters. PLoS Genet 3: e181. doi:10.1371/journal.pgen.0030181.
-
(2007)
PLoS Genet
, vol.3
-
-
Shen, L.1
Kondo, Y.2
Guo, Y.3
Zhang, J.4
Zhang, L.5
-
16
-
-
70349573301
-
DNA methylation and gene expression differences in children conceived in vitro or in vivo
-
Katari S, Turan N, Bibikova M, Erinle O, Chalian R, et al. (2009) DNA methylation and gene expression differences in children conceived in vitro or in vivo. Hum Mol Genet 18: 3769-3778.
-
(2009)
Hum Mol Genet
, vol.18
, pp. 3769-3778
-
-
Katari, S.1
Turan, N.2
Bibikova, M.3
Erinle, O.4
Chalian, R.5
-
18
-
-
55949137722
-
Persistent epigenetic differences associated with prenatal exposure to famine in humans
-
Heijmans BT, Tobi EW, Stein AD, Putter H, Blauw GJ, et al. (2008) Persistent epigenetic differences associated with prenatal exposure to famine in humans. Proc Natl Acad Sci U S A 105: 17046-17049.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 17046-17049
-
-
Heijmans, B.T.1
Tobi, E.W.2
Stein, A.D.3
Putter, H.4
Blauw, G.J.5
-
19
-
-
70349999407
-
DNA methylation differences after exposure to prenatal famine are common and timing- and sex-specific
-
Tobi EW, Lumey LH, Talens RP, Kremer D, Putter H, et al. (2009) DNA methylation differences after exposure to prenatal famine are common and timing- and sex-specific. Hum Mol Genet 18: 4046-4053.
-
(2009)
Hum Mol Genet
, vol.18
, pp. 4046-4053
-
-
Tobi, E.W.1
Lumey, L.H.2
Talens, R.P.3
Kremer, D.4
Putter, H.5
-
20
-
-
7444264729
-
Complex patterns of transcription at the insertion site of a retrotransposon in the mouse
-
Druker R, Bruxner TJ, Lehrbach NJ, Whitelaw E (2004) Complex patterns of transcription at the insertion site of a retrotransposon in the mouse. Nucleic Acids Res 32: 5800-5808.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 5800-5808
-
-
Druker, R.1
Bruxner, T.J.2
Lehrbach, N.J.3
Whitelaw, E.4
-
21
-
-
0036642103
-
Metastable epialleles in mammals
-
Rakyan VK, Blewitt ME, Druker R, Preis JI, Whitelaw E (2002) Metastable epialleles in mammals. Trends Genet 18: 348-351.
-
(2002)
Trends Genet
, vol.18
, pp. 348-351
-
-
Rakyan, V.K.1
Blewitt, M.E.2
Druker, R.3
Preis, J.I.4
Whitelaw, E.5
-
22
-
-
46249117780
-
Genomic surveys by methylation-sensitive SNP analysis identify sequence-dependent allele-specific DNA methylation
-
Kerkel K, Spadola A, Yuan E, Kosek J, Jiang L, et al. (2008) Genomic surveys by methylation-sensitive SNP analysis identify sequence-dependent allele-specific DNA methylation. Nat Genet 40: 904-908.
-
(2008)
Nat Genet
, vol.40
, pp. 904-908
-
-
Kerkel, K.1
Spadola, A.2
Yuan, E.3
Kosek, J.4
Jiang, L.5
-
23
-
-
58149144567
-
Heritable somatic methylation and inactivation of MSH2 in families with Lynch syndrome due to deletion of the 39 exons of TACSTD1
-
Ligtenberg MJ, Kuiper RP, Chan TL, Goossens M, Hebeda KM, et al. (2009) Heritable somatic methylation and inactivation of MSH2 in families with Lynch syndrome due to deletion of the 39 exons of TACSTD1. Nat Genet 41: 112-117.
-
(2009)
Nat Genet
, vol.41
, pp. 112-117
-
-
Ligtenberg, M.J.1
Kuiper, R.P.2
Chan, T.L.3
Goossens, M.4
Hebeda, K.M.5
-
24
-
-
0035234557
-
Genomic imprinting: Parental influence on the genome
-
Reik W, Walter J (2001) Genomic imprinting: parental influence on the genome. Nat Rev Genet 2: 21-32.
-
(2001)
Nat Rev Genet
, vol.2
, pp. 21-32
-
-
Reik, W.1
Walter, J.2
-
25
-
-
33645814398
-
CTCF mediates interchromosomal colocalization between Igf2/H19 and Wsb1/Nf1
-
Ling JQ, Li T, Hu JF, Vu TH, Chen HL, et al. (2006) CTCF mediates interchromosomal colocalization between Igf2/H19 and Wsb1/Nf1. Science 312: 269-272.
-
(2006)
Science
, vol.312
, pp. 269-272
-
-
Ling, J.Q.1
Li, T.2
Hu, J.F.3
Vu, T.H.4
Chen, H.L.5
-
26
-
-
0023587755
-
Increased birthweight after prenatal dietary supplementation of rural African women
-
Prentice AM, Cole TJ, Foord FA, Lamb WH, Whitehead RG (1987) Increased birthweight after prenatal dietary supplementation of rural African women. Am J Clin Nutr 46: 912-925.
-
(1987)
Am J Clin Nutr
, vol.46
, pp. 912-925
-
-
Prentice, A.M.1
Cole, T.J.2
Foord, F.A.3
Lamb, W.H.4
Whitehead, R.G.5
-
27
-
-
13744253869
-
Differential effects of seasonality on preterm birth and intrauterine growth restriction in rural Africans
-
Rayco-Solon P, Fulford AJ, Prentice AM (2005) Differential effects of seasonality on preterm birth and intrauterine growth restriction in rural Africans. Am J Clin Nutr 81: 134-139.
-
(2005)
Am J Clin Nutr
, vol.81
, pp. 134-139
-
-
Rayco-Solon, P.1
Fulford, A.J.2
Prentice, A.M.3
-
28
-
-
1842292083
-
Season of birth predicts mortality in rural Gambia
-
Moore SE, Cole TJ, Poskitt EM, Sonko BJ, Whitehead RG, et al. (1997) Season of birth predicts mortality in rural Gambia. Nature 388: 434.
-
(1997)
Nature
, vol.388
, pp. 434
-
-
Moore, S.E.1
Cole, T.J.2
Poskitt, E.M.3
Sonko, B.J.4
Whitehead, R.G.5
-
29
-
-
2342557977
-
A simple method for estimating global DNA methylation using bisulfite PCR of repetitive DNA elements
-
Yang AS, Estecio MR, Doshi K, Kondo Y, Tajara EH, et al. (2004) A simple method for estimating global DNA methylation using bisulfite PCR of repetitive DNA elements. Nucleic Acids Res 32: e38.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Yang, A.S.1
Estecio, M.R.2
Doshi, K.3
Kondo, Y.4
Tajara, E.H.5
-
30
-
-
0037418193
-
Transgenerational inheritance of epigenetic states at the murine Axin(Fu) allele occurs after maternal and paternal transmission
-
Rakyan VK, Chong S, Champ ME, Cuthbert PC, Morgan HD, et al. (2003) Transgenerational inheritance of epigenetic states at the murine Axin(Fu) allele occurs after maternal and paternal transmission. Proc Natl Acad Sci U S A 100: 2538-2543.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 2538-2543
-
-
Rakyan, V.K.1
Chong, S.2
Champ, M.E.3
Cuthbert, P.C.4
Morgan, H.D.5
-
31
-
-
0006396159
-
Body Composition and Coat Color Correlation in Different Phenotypes of "Viable Yellow" Mice
-
Wolff GL (1965) Body Composition and Coat Color Correlation in Different Phenotypes of "Viable Yellow" Mice. Science 147: 1145-1147.
-
(1965)
Science
, vol.147
, pp. 1145-1147
-
-
Wolff, G.L.1
-
32
-
-
76549135113
-
Evolution in health and medicine Sackler colloquium: Stochastic epigenetic variation as a driving force of development, evolutionary adaptation, and disease
-
Feinberg AP, Irizarry RA (2010) Evolution in health and medicine Sackler colloquium: Stochastic epigenetic variation as a driving force of development, evolutionary adaptation, and disease. Proc Natl Acad Sci U S A 107 Suppl 1: 1757-1764.
-
(2010)
Proc Natl Acad Sci U S a 107 Suppl
, vol.1
, pp. 1757-1764
-
-
Feinberg, A.P.1
Irizarry, R.A.2
-
33
-
-
23044514669
-
Epigenetic differences arise during the lifetime of monozygotic twins
-
Fraga MF, Ballestar E, Paz MF, Ropero S, Setien F, et al. (2005) Epigenetic differences arise during the lifetime of monozygotic twins. Proc Natl Acad Sci U S A 102: 10604-10609.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 10604-10609
-
-
Fraga, M.F.1
Ballestar, E.2
Paz, M.F.3
Ropero, S.4
Setien, F.5
-
34
-
-
59249107052
-
DNA methylation profiles in monozygotic and dizygotic twins
-
Kaminsky ZA, Tang T, Wang SC, Ptak C, Oh GH, et al. (2009) DNA methylation profiles in monozygotic and dizygotic twins. Nat Genet 41: 240-245.
-
(2009)
Nat Genet
, vol.41
, pp. 240-245
-
-
Kaminsky, Z.A.1
Tang, T.2
Wang, S.C.3
Ptak, C.4
Oh, G.H.5
-
35
-
-
17344374131
-
PAX8 mutations associated with congenital hypothyroidism caused by thyroid dysgenesis
-
Macchia PE, Lapi P, Krude H, Pirro MT, Missero C, et al. (1998) PAX8 mutations associated with congenital hypothyroidism caused by thyroid dysgenesis. Nat Genet 19: 83-86.
-
(1998)
Nat Genet
, vol.19
, pp. 83-86
-
-
Macchia, P.E.1
Lapi, P.2
Krude, H.3
Pirro, M.T.4
Missero, C.5
-
36
-
-
26844498125
-
Sequence variants in LITRK1 are associated with Tourette's syndrome
-
Abelson JF, Kwan KY, O'Roak BJ, Baek DY, Stillman AA, et al. (2005) Sequence variants in LITRK1 are associated with Tourette's syndrome. Science 310: 317-320.
-
(2005)
Science
, vol.310
, pp. 317-320
-
-
Abelson, J.F.1
Kwan, K.Y.2
O'Roak, B.J.3
Baek, D.Y.4
Stillman, A.A.5
-
37
-
-
33947310031
-
Environmental epigenomics and disease susceptibility
-
Jirtle RL, Skinner MK (2007) Environmental epigenomics and disease susceptibility. Nat Rev Genet 8: 253-262.
-
(2007)
Nat Rev Genet
, vol.8
, pp. 253-262
-
-
Jirtle, R.L.1
Skinner, M.K.2
-
38
-
-
33144488275
-
Post-weaning diet affects genomic imprinting at the insulin-like growth factor 2 (Igf2) locus
-
Waterland RA, Lin JR, Smith CA, Jirtle RL (2006) Post-weaning diet affects genomic imprinting at the insulin-like growth factor 2 (Igf2) locus. Hum Mol Genet 15: 705-716.
-
(2006)
Hum Mol Genet
, vol.15
, pp. 705-716
-
-
Waterland, R.A.1
Lin, J.R.2
Smith, C.A.3
Jirtle, R.L.4
-
39
-
-
3342989681
-
Epigenetic programming by maternal behavior
-
Weaver IC, Cervoni N, Champagne FA, D'Alessio AC, Sharma S, et al. (2004) Epigenetic programming by maternal behavior. Nat Neurosci 7: 847-854.
-
(2004)
Nat Neurosci
, vol.7
, pp. 847-854
-
-
Weaver, I.C.1
Cervoni, N.2
Champagne, F.A.3
D'alessio, A.C.4
Sharma, S.5
-
40
-
-
0036862451
-
Cardiovascular and diabetes mortality determined by nutrition during parents' and grandparents' slow growth period
-
Kaati G, Bygren LO, Edvinsson S (2002) Cardiovascular and diabetes mortality determined by nutrition during parents' and grandparents' slow growth period. Eur J Hum Genet 10: 682-688.
-
(2002)
Eur J Hum Genet
, vol.10
, pp. 682-688
-
-
Kaati, G.1
Bygren, L.O.2
Edvinsson, S.3
-
41
-
-
31344434726
-
Sex-specific, male-line transgenerational responses in humans
-
Pembrey ME, Bygren LO, Kaati G, Edvinsson S, Northstone K, et al. (2006) Sex-specific, male-line transgenerational responses in humans. Eur J Hum Genet 14: 159-166.
-
(2006)
Eur J Hum Genet
, vol.14
, pp. 159-166
-
-
Pembrey, M.E.1
Bygren, L.O.2
Kaati, G.3
Edvinsson, S.4
Northstone, K.5
-
42
-
-
0022643594
-
Folate status during pregnancy and lactation in a West African rural community
-
Bates CJ, Fuller NJ, Prentice AM (1986) Folate status during pregnancy and lactation in a West African rural community. Hum Nutr Clin Nutr 40: 3-13.
-
(1986)
Hum Nutr Clin Nutr
, vol.40
, pp. 3-13
-
-
Bates, C.J.1
Fuller, N.J.2
Prentice, A.M.3
-
43
-
-
58849158772
-
Global DNA hypomethylation is associated with high serum-persistent organic pollutants in Greenlandic Inuit
-
Rusiecki JA, Baccarelli A, Bollati V, Tarantini L, Moore LE, et al. (2008) Global DNA hypomethylation is associated with high serum-persistent organic pollutants in Greenlandic Inuit. Environ Health Perspect 116: 1547-1552.
-
(2008)
Environ Health Perspect
, vol.116
, pp. 1547-1552
-
-
Rusiecki, J.A.1
Baccarelli, A.2
Bollati, V.3
Tarantini, L.4
Moore, L.E.5
-
44
-
-
33746340651
-
Aflatoxin B1 and polycyclic aromatic hydrocarbon adducts, p53 mutations and p16 methylation in liver tissue and plasma of hepatocellular carcinoma patients
-
Zhang YJ, Rossner P, Jr., Chen Y, Agrawal M, Wang Q, et al. (2006) Aflatoxin B1 and polycyclic aromatic hydrocarbon adducts, p53 mutations and p16 methylation in liver tissue and plasma of hepatocellular carcinoma patients. Int J Cancer 119: 985-991.
-
(2006)
Int J Cancer
, vol.119
, pp. 985-991
-
-
Zhang, Y.J.1
Rossner Jr., P.2
Chen, Y.3
Agrawal, M.4
Wang, Q.5
-
45
-
-
0024452980
-
Protection of children from seasonal nutritional stress in an Andean agricultural community
-
Leonard WR (1989) Protection of children from seasonal nutritional stress in an Andean agricultural community. Eur J Clin Nutr 43: 597-602.
-
(1989)
Eur J Clin Nutr
, vol.43
, pp. 597-602
-
-
Leonard, W.R.1
-
46
-
-
68849129609
-
Seasonality in maternal intake and activity influence offspring's birth size among rural Indian mothers-Pune Maternal Nutrition Study
-
Rao S, Kanade AN, Yajnik CS, Fall CH (2009) Seasonality in maternal intake and activity influence offspring's birth size among rural Indian mothers-Pune Maternal Nutrition Study. Int J Epidemiol 38: 1094-1103.
-
(2009)
Int J Epidemiol
, vol.38
, pp. 1094-1103
-
-
Rao, S.1
Kanade, A.N.2
Yajnik, C.S.3
Fall, C.H.4
-
47
-
-
0001279038
-
Preparation of genomic DNA from mammalian tissue
-
In: Ausubel FM, et al, New York: J. Wiley & Sons
-
Strauss WM (2001) Preparation of genomic DNA from mammalian tissue. In: Ausubel FM, et al. (2001) Current protocols in molecular biology. New York: J. Wiley & Sons. pp 2.2.1-2.2.3.
-
(2001)
Current Protocols In Molecular Biology
, vol.2001
, pp. 1-3
-
-
Strauss, W.M.1
-
48
-
-
70349322843
-
Common polymorphic variation in the genetically diverse African insulin gene and its association with size at birth
-
Petry CJ, Rayco-Solon P, Fulford AJ, Stead JD, Wingate DL, et al. (2009) Common polymorphic variation in the genetically diverse African insulin gene and its association with size at birth. Hum Genet 126: 375-384.
-
(2009)
Hum Genet
, vol.126
, pp. 375-384
-
-
Petry, C.J.1
Rayco-Solon, P.2
Fulford, A.J.3
Stead, J.D.4
Wingate, D.L.5
-
49
-
-
0024284028
-
A simple salting out procedure for extracting DNA from human nucleated cells
-
Miller SA, Dykes DD, Polesky HF (1988) A simple salting out procedure for extracting DNA from human nucleated cells. Nucleic Acids Res 16: 1215.
-
(1988)
Nucleic Acids Res
, vol.16
, pp. 1215
-
-
Miller, S.A.1
Dykes, D.D.2
Polesky, H.F.3
-
50
-
-
33847736948
-
Optimizing annealing temperature overcomes bias in bisulfite PCR methylation analysis
-
Shen L, Guo Y, Chen X, Ahmed S, Issa JP (2007) Optimizing annealing temperature overcomes bias in bisulfite PCR methylation analysis. Biotechniques 42: 48-58.
-
(2007)
Biotechniques
, vol.42
, pp. 48-58
-
-
Shen, L.1
Guo, Y.2
Chen, X.3
Ahmed, S.4
Issa, J.P.5
|