A high-affinity gold-binding camel antibody: Antibody engineering for one-pot functionalization of gold nanoparticles as biointerface molecules

Bioconjugate Chemistry

Volumn 23, Issue 9, 2012, Pages 1934-1944

  Hattori, Takamitsu ^a   Umetsu, Mitsuo ^a   Nakanishi, Takeshi ^a   Sawai, Satoko ^a   Kikuchi, Shinsuke ^a   Asano, Ryutaro ^a   Kumagai, Izumi ^a  

^a TOHOKU UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

DISPERSIONS; FIBER OPTIC SENSORS; GOLD NANOPARTICLES; GRAFTING (CHEMICAL); INTERFACES (MATERIALS); IONIC STRENGTH; METAL NANOPARTICLES; MOLECULES; PEPTIDES; SURFACE PLASMON RESONANCE;

ANTIBODY ENGINEERING; BIOINTERFACES; CAMEL ANTIBODY; FUNCTIONALIZATIONS; HIGH AFFINITY; HIGH SPECIFICITY; INTERFACE MOLECULES; MEDICINAL CHEMISTRY; ONE POT; PROTEIN ENGINEERING;

ANTIBODIES;

ANTIBODY; GOLD NANOPARTICLE; NANOPARTICLE;

ANTIBODY ENGINEERING; ANTIGEN BINDING; ARTICLE; BINDING AFFINITY; CAMEL; CANCER CELL; HEAVY CHAIN; IONIC STRENGTH; NONHUMAN; PHAGE DISPLAY; SURFACE PLASMON RESONANCE;

EID: 84866420085     PISSN: 10431802     EISSN: 15204812     Source Type: Journal    
DOI: 10.1021/bc300316p     Document Type: Article

References (58)

1. Chan, W. C. W. and Nie, S. (1998) Quantum Dot Bioconjugates for Ultrasensitive Nonisotopic Detection Science 281, 2016-2018 (Pubitemid 28475486)
2. Cao, Y., Jin, R., and Mirkin, C. (2002) Nanoparticles with Raman spectroscopic fingerprints for DNA and RNA detection Science 297, 1536-1540 (Pubitemid 34970997)
3. Joo, S. H., Choi, S. J., Oh, I., Kwak, J., Liu, Z., Terasaki, O., and Ryoo, R. (2001) Ordered nanoporous arrays of carbon supporting high dispersions of platinum nanoparticles Nature 412, 169-172 (Pubitemid 32674709)
4. Caruso, F., Caruso, R. A., and Möhwald, H. (1998) Nanoengineering of inorganic and hybrid hollow spheres by colloidal templating Science 282, 1111-1114 (Pubitemid 28516238)
5. Gao, X., Cui, Y., Levenson, R. M., Chung, L. W. K., and Nie, S. (2004) In vivo cancer targeting and imaging with semiconductor quantum dots Nat. Biotechnol. 22, 969-976 (Pubitemid 39014473)
6. Mornet, S., Vasseur, S., Grasset, F., and Duguet, E. (2004) Magnetic nanoparticle design for medical diagnosis and therapy J. Mater. Chem. 14, 2161-2175
7. Zhang, J., Ohara, S., Umetsu, M., Naka, T., Hatakeyama, Y., and Adschiri, T. (2007) Colloidal Ceria Nanocrystals: A Tailor-made Crystal Morphology in Supercritical Water Adv. Mater. 19, 203-206 (Pubitemid 46178029)
8. Shevchenko, E. V., Talapin, D. V., Kotov, N. A., OBrien, S., and Murray, C. B. (2006) Structural diversity in binary nanoparticle superlattices Nature 439, 55-59 (Pubitemid 43053626)
9. Whaley, S. R., English, D. S., Hu, E. L., Barbara, P. E., and Belcher, A. M. (2000) Selection of peptides with semiconductor binding specificity for directed nanocrystal assembly Nature 405, 665-668 (Pubitemid 30428648)
10. Sarikaya, M., Tamerler, C., Jen, A. K-Y., Schulten, K., and Baneyx, F. (2003) Molecular biomimetics: nanotechnology through biology Nat. Mater. 2, 577-585
11. Naik, R. R., Stringer, S. J., Agarwal, G., Jones, S. E., and Stone, M. O. (2002) Biomimetic synthesis and patterning of silver nanoparticles Nat. Mater. 1, 169-172
12. Mao, C., Solis, D. J., Reiss, B. D., Kottmann, S. T., Sweeney, R. Y., Hayhurst, A., Georgiou, G., Iverson, B., and Belcher, A. M. (2004) Virus-based toolkit for the directed synthesis of magnetic and semiconducting nanowires Science 303, 213-217 (Pubitemid 38057567)
13. Shimada, Y., Suzuki, M., Sugiyama, M., Kumagai, I., and Umetsu, M. (2011) Bioassisted capture and release of nanoparticles on nano-lithographed ZnO films Nanotechnology 22, 275302(1-6)
14. Park, T. J., Lee, S. Y., Lee, S. J., Park, J. P., Yang, K. S., Lee, K. B., Ko, S., Park, J. B., Kim, T., Kim, S. K., Shin, Y. B., Chung, B. H., Ku, S. J., Kim do, H., and Choi, I. S. (2006) Protein nanopatterns and biosensors using gold binding polypeptide as a fusion partner Anal. Chem. 78, 7197-7205 (Pubitemid 44607563)
15. Zhou, W., Schwartz, D. T., and Baneyx, F. (2010) Single-pot biofabrication of zinc sulfide immuno-quantum dots J. Am. Chem. Soc. 132, 4731-4738
16. Umetsu, M., Mizuta, M., Tsumoto, K., Ohara, S., Takami, S., Watanabe, H., Kumagai, I., and Adschiri, T. (2005) Bioassisted room-temperature immobilization and mineralization of zinc oxide-the structural ordering of ZnO nanoparticles into a flower-type morphology Adv. Mater. 17, 2571-2575 (Pubitemid 41587526)
17. Kramer, R. M., Li, C., Carter, D. C., Stone, M. O., and Naik, R. R. (2004) Engineered Protein Cages for Nanomaterial Synthesis J. Am. Chem. Soc. 126, 13282-13286 (Pubitemid 39382754)
18. Chiu, C.-Y., Li, Y., Ruan, L., Ye, X., Murray, C. B., and Huang, Y. (2011) Platinum nanocrystals selectively shaped using facet-specific peptide sequences Nat. Chem. 3, 393-399
19. Ibii, T., Kaieda, M., Hatakeyama, S., Shiotuka, H., Kumagai, I., Watanabe, H., Umetsu, M., and Imamura, T. (2010) Direct immobilization of gold-binding antibody fragments for immunosensor applications Anal. Chem. 82, 4229-4235
20. Hattori, T., Umetsu, M., Nakanishi, T., Togashi, T., Yokoo, N., Abe, H., Ohara, S., Adschiri, T., and Kumagai, I. (2010) High affinity anti-inorganic material antibody generation by integrating graft and evolution technologies. Potential of antibodies as biointerface molecules J. Biol. Chem. 285, 7784-7793
21. Bogan, A. A. and Thorn, K. S. (1998) Anatomy of hot spots in protein interfaces J. Mol. Biol. 280, 1-9 (Pubitemid 28312802)
22. Li, Y., Li, H., Yang, F., Smith-Gill, S. J., and Mariuzza, R. A. (2003) X-ray snapshots of the maturation of an antibody response to a protein antigen Nat. Struct. Biol. 10, 482-488 (Pubitemid 36637647)
23. Hattori, T., Umetsu, M., Nakanishi, T., Tsumoto, K., Ohara, S., Abe, H., Naito, M., Asano, R., Adschiri, T., and Kumagai, I. (2008) Grafting of material-binding function into antibodies: functionalization by peptide grafting Biochem. Biophys. Res. Commun. 365, 751-757 (Pubitemid 350234855)
24. Watanabe, H., Nakanishi, T., Umetsu, M., and Kumagai, I. (2008) Human anti-gold antibodies: Biofunctionalization of gold nanoparticles and surfaces with anti-gold antibodies J. Biol. Chem. 283, 36031-38
25. Mirkin, C. A., Letsinger, R. L., Mucic, R. C., and Storhoff, J. J. (1996) A DNA-based method for rationally assembling nanoparticles into macroscopic materials Nature 382, 607-609 (Pubitemid 26268949)
26. El-Sayed, I. H., Huang, X., and El-Sayed, M. A. (2005) Surface plasmon resonance scattering and absorption of anti-EGFR antibody conjugated gold nanoparticles in cancer diagnostics: applications in oral cancer Nano Lett. 5, 829-834 (Pubitemid 40749040)
27. Huang, J.-S., Callegari, V., Geisler, P., Brüning, C., JKern, J., Prangsma, J. C., Wu., X., Feichtner, T., Ziegler, J., Weinmann, P., Kamp, M., Forchel, A., Biagioni, P., Sennhauser, U., and Hecht, B. (2010) Atomically flat single-crystalline gold nanostructures for plasmonic nanocircuitry Nat. Commun. 1, 150(1-8)
28. Nam, K. T., Kim, D. W., Yoo, P. J., Chiang, C. Y., Meethong, N., Hammond, P. T., Chiang, Y. M., and Belcher, A. M. (2006) Virus-enabled synthesis and assembly of nanowires for lithium ion battery electrodes Science 312, 885-888 (Pubitemid 43727315)
29. Maenaka, K., Furuta, M., Tsumoto, K., Watanabe, K., Ueda, Y., and Kumagai, I. (1996) A stable phage-display system using a phagemid vector: phage display of hen egg-white lysozyme (HEL), Escherichia coli alkaline, phosphatase, and anti-HEL monoclonal antibody, HyHEL10 Biochem. Biophys. Res. Commun. 218, 682-687 (Pubitemid 26050723)
30. Roovers, R. C., Laeremans, T., Huang, L., De Taeye, S., Verkleij, A. J., Revets, H., De Haard, H. J., and Van Bergen En Henegouwen, P. M. P. (2007) Efficient inhibition of EGFR signalling and of tumour growth by antagonistic anti-EGFR nanobodies Cancer Immunol. Immunother. 56, 303-317 (Pubitemid 46035901)
31. Conrath, K., Lauwereys, M., Wyns, L., and Muyldermans, S. (2001) Camel single-domain antibodies as modular building units in bispecific and bivalent antibody constructs J. Biol. Chem. 276, 7346-7350
32. Cloutier, S. M., Couty, S., Terskikh, A., Marguerat, L., Crivelli, V., Pugnières, M., Mani, J., Leisinger, H., Mach, J., and Deperthes, D. (2000) Streptabody, a high avidity molecule made by tetramerization of in vivo biotinylated, phage display-selected scFv fragments on streptavidin Mol. Immunol. 37, 1067-1077 (Pubitemid 32786719)
33. Saerens, D., Pellis, M., Loris, R., Pardon, E., Dumoulin, M., Matagne, A., Wyns, L., Muyldermans, S., and Conrath, K. (2005) Identification of a universal VHH framework to graft non-canonical antigen-binding loops of camel single-domain antibodies J. Mol. Biol. 352, 597-607 (Pubitemid 41225471)
34. Yokoo, N., Togashi, T., Umetsu, M., Tsumoto, K., Hattori, T., Nakanishi, T., Ohara, S., Takami, S., Naka, T., Abe, H., Kumagai, I., and Adschiri, T. (2010) Direct and selective immobilization of proteins by means of an inorganic material-binding peptide: discussion on functionalization in the elongation to material-binding peptide J. Phys. Chem. B 114, 480-486
35. Krämer, S., Xie, H., Gaff, J., Williamson, J. R., Tkachenko, A. G., Nouri, N., Feldheim, D. A., and Feldheim, D. L. (2004) Preparation of protein gradients through the controlled deposition of protein-nanoparticle conjugates onto functionalized surfaces J. Am. Chem. Soc. 126, 5388-5395 (Pubitemid 38596350)
36. Burt, J. L., Gutiérrez-Wing, C., Miki-Yoshida, M., and José-Yacamán, M. (2004) Noble-metal nanoparticles directly conjugated to globular proteins Langmuir 20, 11778-11783 (Pubitemid 40049655)
37. Adams, G. P. and Weiner, L. M. (2005) Monoclonal antibody therapy of cancer Nat. Biotechnol. 23, 1147-1157 (Pubitemid 41486396)
38. Sharkey, R. M., Cardillo, T. M., Rossi, E. A., Chang, C. H., Karacay, H., McBride, W. J., Hansen, H. J., Horak, I. D., and Goldenberg, D. M. (2005) Signal amplification in molecular imaging by pretargeting a multivalent, bispecific antibody Nat. Med. 11, 1250-1255 (Pubitemid 43093674)
39. Barbas, C. F., Rosenblum, J., and Lerner, R. (1993) Direct selection of antibodies that coordinate metals from semisynthetic combinatorial libraries Proc. Natl. Acad. Sci. U.S.A. 90, 6385-6389 (Pubitemid 23207217)
40. Schnirman, A. A., Zahavi, E., Yeger, H., Rosenfeld, R., Benhar, I., Reiter, Y., and Sivan, U. (2006) Antibody molecules discriminate between crystalline facets of a gallium arsenide semiconductor Nano Lett. 6, 1870-1874 (Pubitemid 44555223)
41. Barbas, C. F., Languino, L. R., and Smith, J. W. (1993) High-affinity self-reactive human antibodies by design and selection: Targeting the integrin ligand binding site Proc. Natl. Acad. Sci. U.S.A. 90, 10003-10007 (Pubitemid 23328239)
42. Peelle, B. R., Krauland, E. M., Wittrup, K. D., and Belcher, A. M. (2005) Design criteria for engineering inorganic material-specific peptides Langmuir 21, 6929-6933 (Pubitemid 41084481)
43. Holliger, P. and Hudson, P. J. (2005) Engineered antibody fragments and the rise of single domains Nat. Biotechnol. 23, 1126-1136 (Pubitemid 41486394)
44. Watanabe, H., Kanazaki, K., Nakanishi, T., Shiotsuka, H., Hatakeyama, S., Kaieda, M., Imamura, T., Umetsu, M., and Kumagai, I. (2011) Biomimetic engineering of modular bispecific antibodies for biomolecule immobilization Langmuir 27, 9656-9661
45. Ward, E. S., Güssow, D., Griffiths, A. D., Jones, P. T., and Winter, G. (1989) Binding activities of a repertoire of single immunoglobulin variable domains secreted from Escherichia coli Nature 341, 544-546 (Pubitemid 19252529)
46. Derjaguin, B. V. and Landau, L. (1941) Theory of the stability of strongly charged lyophobic sols and of the adhesion of strongly charged particles in solutions of electrolytes Acta Physicochim. URSS 14, 633-662
47. Verwey, E. J. W. (1947) Theory of the stability of lyophobic colloids J. Phys. Colloid Chem. 51, 631-636
48. Daniel, M. C. and Astruc, D. (2004) Gold nanoparticles: assembly, supramolecular chemistry, quantum-size-related properties, and applications toward biology, catalysis, and nanotechnology Chem. Rev. 104, 293-346
49. Norde, W. (1986) Adsorption of proteins from solution at the solid-liquid interface Adv. Colloid Interface Sci. 25, 267-340
50. Lucocq, J. (1994) Quantitation of gold labelling and antigens in immunolabelled ultrathin sections J. Anat. 184, 1-13 (Pubitemid 24085808)
51. Mayhew, T. M., Muhlfeld, C., Vanhecke, D., and Ochs, M. (2009) A review of recent methods for efficiently quantifying immunogold and other nanoparticles using TEM sections through cells, tissues and organs Ann. Anat. 191, 153-170
52. El-Sayed, I. H., Huang, X., and El-Sayed, M. A. (2006) Selective laser photo-thermal therapy of epithelial carcinoma using anti-EGFR antibody conjugated gold nanoparticles Cancer Lett. 239, 129-135 (Pubitemid 43946581)
53. Jones, M. R., Macfarlane, R. J., Lee, B., Zhang, J., Young, K. L., Senesi, A. J., and Mirkin, C. A. (2010) DNA-nanoparticle superlattices formed from anisotropic building blocks Nat. Mater. 9, 913-917
54. Connolly, S., Fitzmaurice, D. S., and Connolly, D. (1999) Fitzmaurice, Programmed assembly of gold nanocrystals in aqueous solution Adv. Mater. 11, 1202-1205
55. 2 architectures using biotin-avidin as a connector J. Am. Chem. Soc. 127, 1344-1345 (Pubitemid 40204488)
56. Shenton, W., Davis, S. A., and Mann, S. (1999) Directed self-assembly of nanoparticles into macroscopic materials using antibody-antigen recognition Adv. Mater. 11, 449-452
57. Kacar, T., Ray, J., Gungormus, M., Oren, E. E., Tamerler, C., and Sarikaya, M. (2009) Quartz binding peptides as molecular linkers towards fabricating multifunctional micropatterned substrates Adv. Mater. 21, 295-299
58. Wei, J. H., Kacar, T., Tamerler, C., Sarikaya, M., David, S., and Ginger, D. S. (2009) Nanopatterning peptides as bifunctional inks for templated assembly Small 5, 689-693