-
1
-
-
33845403359
-
Mechanisms of cyclic di-GMP signaling in bacteria
-
Jenal, U., and Malone, J. (2006) Mechanisms of cyclic di-GMP signaling in bacteria. Annu. Rev. Genet. 40, 385-407
-
(2006)
Annu. Rev. Genet.
, vol.40
, pp. 385-407
-
-
Jenal, U.1
Malone, J.2
-
2
-
-
63049137897
-
Principles of c-di-GMP signaling in bacteria
-
Hengge, R. (2009) Principles of c-di-GMP signaling in bacteria. Nat. Rev. Microbiol. 7, 263-273
-
(2009)
Nat. Rev. Microbiol.
, vol.7
, pp. 263-273
-
-
Hengge, R.1
-
3
-
-
70349274104
-
Structural and mechanistic determinants of c-di-GMP signaling
-
Schirmer, T., and Jenal, U. (2009) Structural and mechanistic determinants of c-di-GMP signaling. Nat. Rev. Microbiol. 7, 724-735
-
(2009)
Nat. Rev. Microbiol.
, vol.7
, pp. 724-735
-
-
Schirmer, T.1
Jenal, U.2
-
4
-
-
36549026048
-
Role of polysaccharides in Pseudomonas aeruginosa biofilm development
-
Ryder, C., Byrd, M., and Wozniak, D. J. (2007) Role of polysaccharides in Pseudomonas aeruginosa biofilm development. Curr. Opin. Microbiol. 10, 644-648
-
(2007)
Curr. Opin. Microbiol.
, vol.10
, pp. 644-648
-
-
Ryder, C.1
Byrd, M.2
Wozniak, D.J.3
-
5
-
-
76449086560
-
Characterization of starvation-induced dispersion in Pseudomonas putida biofilms. Genetic elements and molecular mechanisms
-
Gjermansen, M., Nilsson, M., Yang, L., and Tolker-Nielsen, T. (2010) Characterization of starvation-induced dispersion in Pseudomonas putida biofilms. Genetic elements and molecular mechanisms. Mol. Microbiol. 75, 815-826
-
(2010)
Mol. Microbiol.
, vol.75
, pp. 815-826
-
-
Gjermansen, M.1
Nilsson, M.2
Yang, L.3
Tolker-Nielsen, T.4
-
6
-
-
58149485506
-
Second messenger-mediated spatiotemporal control of protein degradation regulates bacterial cell cycle progression
-
Duerig, A., Abel, S., Folcher, M., Nicollier, M., Schwede, T., Amiot, N., Giese, B., and Jenal, U. (2009) Second messenger-mediated spatiotemporal control of protein degradation regulates bacterial cell cycle progression. Genes Dev. 23, 93-104
-
(2009)
Genes Dev.
, vol.23
, pp. 93-104
-
-
Duerig, A.1
Abel, S.2
Folcher, M.3
Nicollier, M.4
Schwede, T.5
Amiot, N.6
Giese, B.7
Jenal, U.8
-
7
-
-
35648979519
-
Virulence and prodigiosin antibiotic biosynthesis in Serratia are regulated pleiotropically by the GGDEF/EAL domain protein, PigX
-
Fineran, P. C., Williamson, N. R., Lilley, K. S., and Salmond, G. P. (2007) Virulence and prodigiosin antibiotic biosynthesis in Serratia are regulated pleiotropically by the GGDEF/EAL domain protein, PigX. J. Bacteriol. 189, 7653-7662
-
(2007)
J. Bacteriol.
, vol.189
, pp. 7653-7662
-
-
Fineran, P.C.1
Williamson, N.R.2
Lilley, K.S.3
Salmond, G.P.4
-
8
-
-
0242523776
-
Bacterial biofilms. An emerging link to disease pathogenesis
-
Parsek, M. R., and Singh, P. K. (2003) Bacterial biofilms. An emerging link to disease pathogenesis. Annu. Rev. Microbiol. 57, 677-701
-
(2003)
Annu. Rev. Microbiol.
, vol.57
, pp. 677-701
-
-
Parsek, M.R.1
Singh, P.K.2
-
9
-
-
33751566136
-
The HD-GYP domain, cyclic di-GMP signaling, and bacterial virulence to plants
-
Dow, J. M., Fouhy, Y., Lucey, J. F., and Ryan, R. P. (2006) The HD-GYP domain, cyclic di-GMP signaling, and bacterial virulence to plants. Mol. Plant. Microbe. Interact. 19, 1378-1384
-
(2006)
Mol. Plant. Microbe. Interact.
, vol.19
, pp. 1378-1384
-
-
Dow, J.M.1
Fouhy, Y.2
Lucey, J.F.3
Ryan, R.P.4
-
10
-
-
35848951876
-
Roles of cyclic diguanylate in the regulation of bacterial pathogenesis
-
Tamayo, R., Pratt, J. T., and Camilli, A. (2007) Roles of cyclic diguanylate in the regulation of bacterial pathogenesis. Annu. Rev. Microbiol. 61, 131-148
-
(2007)
Annu. Rev. Microbiol.
, vol.61
, pp. 131-148
-
-
Tamayo, R.1
Pratt, J.T.2
Camilli, A.3
-
11
-
-
33644516891
-
Analysis of Pseudomonas aeruginosa diguanylate cyclases and phosphodiesterases reveals a role for bis-(3′-5′)-cyclic-GMP in virulence
-
Kulasakara, H., Lee, V., Brencic, A., Liberati, N., Urbach, J., Miyata, S., Lee, D. G., Neely, A. N., Hyodo, M., Hayakawa, Y., Ausubel, F. M., and Lory, S. (2006) Analysis of Pseudomonas aeruginosa diguanylate cyclases and phosphodiesterases reveals a role for bis-(3′-5′)-cyclic-GMP in virulence. Proc. Natl. Acad. Sci. U.S.A. 103, 2839-2844
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 2839-2844
-
-
Kulasakara, H.1
Lee, V.2
Brencic, A.3
Liberati, N.4
Urbach, J.5
Miyata, S.6
Lee, D.G.7
Neely, A.N.8
Hyodo, M.9
Hayakawa, Y.10
Ausubel, F.M.11
Lory, S.12
-
12
-
-
0035899964
-
Genetic data indicate that proteins containing theGGDEFdomain possess diguanylate cyclase activity
-
Ausmees, N., Mayer, R., Weinhouse, H., Volman, G., Amikam, D., Benziman, M., and Lindberg, M. (2001) Genetic data indicate that proteins containing theGGDEFdomain possess diguanylate cyclase activity. FEMS Microbiol. Lett. 204, 163-167
-
(2001)
FEMS Microbiol. Lett.
, vol.204
, pp. 163-167
-
-
Ausmees, N.1
Mayer, R.2
Weinhouse, H.3
Volman, G.4
Amikam, D.5
Benziman, M.6
Lindberg, M.7
-
13
-
-
1842451699
-
Cell cycle-dependent dynamic localization of a bacterial response regulator with a novel di-guanylate cyclase output domain
-
Paul, R., Weiser, S., Amiot, N. C., Chan, C., Schirmer, T., Giese, B., and Jenal, U. (2004) Cell cycle-dependent dynamic localization of a bacterial response regulator with a novel di-guanylate cyclase output domain. Genes Dev. 18, 715-727
-
(2004)
Genes Dev.
, vol.18
, pp. 715-727
-
-
Paul, R.1
Weiser, S.2
Amiot, N.C.3
Chan, C.4
Schirmer, T.5
Giese, B.6
Jenal, U.7
-
14
-
-
21844451590
-
The ubiquitous protein domain EAL is a cyclic diguanylate-specific phosphodiesterase. Enzymatically active and inactive EAL domains
-
Schmidt, A. J., Ryjenkov, D. A., and Gomelsky, M. (2005) The ubiquitous protein domain EAL is a cyclic diguanylate-specific phosphodiesterase. Enzymatically active and inactive EAL domains. J. Bacteriol. 187, 4774-4781
-
(2005)
J. Bacteriol.
, vol.187
, pp. 4774-4781
-
-
Schmidt, A.J.1
Ryjenkov, D.A.2
Gomelsky, M.3
-
15
-
-
33646249963
-
Cell-cell signaling in Xanthomonas campestris involves an HD-GYP domain protein that functions in cyclic di-GMP turnover
-
Ryan, R. P., Fouhy, Y., Lucey, J. F., Crossman, L. C., Spiro, S., He, Y. W., Zhang, L. H., Heeb, S., Cámara, M., Williams, P., and Dow, J. M. (2006) Cell-cell signaling in Xanthomonas campestris involves an HD-GYP domain protein that functions in cyclic di-GMP turnover. Proc. Natl. Acad. Sci. U.S.A. 103, 6712-6717
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 6712-6717
-
-
Ryan, R.P.1
Fouhy, Y.2
Lucey, J.F.3
Crossman, L.C.4
Spiro, S.5
He, Y.W.6
Zhang, L.H.7
Heeb, S.8
Cámara, M.9
Williams, P.10
Dow, J.M.11
-
16
-
-
10344238965
-
Structural basis of activity and allosteric control of diguanylate cyclase
-
Chan, C., Paul, R., Samoray, D., Amiot, N. C., Giese, B., Jenal, U., and Schirmer, T. (2004) Structural basis of activity and allosteric control of diguanylate cyclase. Proc. Natl. Acad. Sci. U.S.A. 101, 17084-17089
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, pp. 17084-17089
-
-
Chan, C.1
Paul, R.2
Samoray, D.3
Amiot, N.C.4
Giese, B.5
Jenal, U.6
Schirmer, T.7
-
17
-
-
33750441136
-
Allosteric control of cyclic di-GMP signaling
-
Christen, B., Christen, M., Paul, R., Schmid, F., Folcher, M., Jenoe, P., Meuwly, M., and Jenal, U. (2006) Allosteric control of cyclic di-GMP signaling. J. Biol. Chem. 281, 32015-32024
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 32015-32024
-
-
Christen, B.1
Christen, M.2
Paul, R.3
Schmid, F.4
Folcher, M.5
Jenoe, P.6
Meuwly, M.7
Jenal, U.8
-
18
-
-
70349783823
-
Determinants for the activation and autoinhibition of the diguanylate cyclase response regulator WspR
-
De, N., Navarro, M. V., Raghavan, R. V., and Sondermann, H. (2009) Determinants for the activation and autoinhibition of the diguanylate cyclase response regulator WspR. J. Mol. Biol. 393, 619-633
-
(2009)
J. Mol. Biol.
, vol.393
, pp. 619-633
-
-
De, N.1
Navarro, M.V.2
Raghavan, R.V.3
Sondermann, H.4
-
19
-
-
34547659282
-
Structure of BeF3-modified response regulator PleD. Implications for diguanylate cyclase activation, catalysis, and feedback inhibition
-
Wassmann, P., Chan, C., Paul, R., Beck, A., Heerklotz, H., Jenal, U., and Schirmer, T. (2007) Structure of BeF3-modified response regulator PleD. Implications for diguanylate cyclase activation, catalysis, and feedback inhibition. Structure 15, 915-927
-
(2007)
Structure
, vol.15
, pp. 915-927
-
-
Wassmann, P.1
Chan, C.2
Paul, R.3
Beck, A.4
Heerklotz, H.5
Jenal, U.6
Schirmer, T.7
-
20
-
-
41749103519
-
Phosphorylation-independent regulation of the diguanylate cyclase WspR
-
De, N., Pirruccello, M., Krasteva, P. V., Bae, N., Raghavan, R. V., and Sondermann, H. (2008) Phosphorylation-independent regulation of the diguanylate cyclase WspR. PLoS Biol. 6, e67
-
(2008)
PLoS Biol.
, vol.6
-
-
De, N.1
Pirruccello, M.2
Krasteva, P.V.3
Bae, N.4
Raghavan, R.V.5
Sondermann, H.6
-
21
-
-
33750432511
-
Cyclic-di-GMP-mediated signaling within the sigma network of Escherichia coli
-
Weber, H., Pesavento, C., Possling, A., Tischendorf, G., and Hengge, R. (2006) Cyclic-di-GMP-mediated signaling within the sigma network of Escherichia coli. Mol. Microbiol. 62, 1014-1034
-
(2006)
Mol. Microbiol.
, vol.62
, pp. 1014-1034
-
-
Weber, H.1
Pesavento, C.2
Possling, A.3
Tischendorf, G.4
Hengge, R.5
-
22
-
-
34547682212
-
The second messenger bis-(3′-5′)-cyclic GMP and its PilZ domain-containing receptor Alg44 are required for alginate biosynthesis in Pseudomonas aeruginosa
-
Merighi, M., Lee, V. T., Hyodo, M., Hayakawa, Y., and Lory, S. (2007) The second messenger bis-(3′-5′)-cyclic GMP and its PilZ domain-containing receptor Alg44 are required for alginate biosynthesis in Pseudomonas aeruginosa. Mol. Microbiol. 65, 876-895
-
(2007)
Mol. Microbiol.
, vol.65
, pp. 876-895
-
-
Merighi, M.1
Lee, V.T.2
Hyodo, M.3
Hayakawa, Y.4
Lory, S.5
-
23
-
-
33846320476
-
Phosphate- dependent modulation of c-di-GMP levels regulates Pseudomonas fluorescens Pf0-1 biofilm formation by controlling secretion of the adhesin LapA
-
Monds, R. D., Newell, P. D., Gross, R. H., and O'Toole, G. A. (2007) Phosphate- dependent modulation of c-di-GMP levels regulates Pseudomonas fluorescens Pf0-1 biofilm formation by controlling secretion of the adhesin LapA. Mol. Microbiol. 63, 656-679
-
(2007)
Mol. Microbiol.
, vol.63
, pp. 656-679
-
-
Monds, R.D.1
Newell, P.D.2
Gross, R.H.3
O'Toole, G.A.4
-
24
-
-
30344469912
-
PilZ domain is part of the bacterial c-di-GMP-binding protein
-
Amikam, D., and Galperin, M. Y. (2006) PilZ domain is part of the bacterial c-di-GMP-binding protein. Bioinformatics 22, 3-6
-
(2006)
Bioinformatics
, vol.22
, pp. 3-6
-
-
Amikam, D.1
Galperin, M.Y.2
-
25
-
-
33750044865
-
The PilZ domain is a receptor for the second messenger c-di-GMP. The PilZ domain protein YcgR controls motility in enterobacteria
-
Ryjenkov, D. A., Simm, R., Römling, U., and Gomelsky, M. (2006) The PilZ domain is a receptor for the second messenger c-di-GMP. The PilZ domain protein YcgR controls motility in enterobacteria. J. Biol. Chem. 281, 30310-30314
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 30310-30314
-
-
Ryjenkov, D.A.1
Simm, R.2
Römling, U.3
Gomelsky, M.4
-
26
-
-
37149042731
-
The structural basis of cyclic diguanylate signal transduction by PilZ domains
-
Benach, J., Swaminathan, S. S., Tamayo, R., Handelman, S. K., Folta-Stogniew, E., Ramos, J. E., Forouhar, F., Neely, H., Seetharaman, J., Camilli, A., and Hunt, J. F. (2007) The structural basis of cyclic diguanylate signal transduction by PilZ domains. EMBO J. 26, 5153-5166
-
(2007)
EMBO J.
, vol.26
, pp. 5153-5166
-
-
Benach, J.1
Swaminathan, S.S.2
Tamayo, R.3
Handelman, S.K.4
Folta-Stogniew, E.5
Ramos, J.E.6
Forouhar, F.7
Neely, H.8
Seetharaman, J.9
Camilli, A.10
Hunt, J.F.11
-
27
-
-
76749083886
-
Vibrio cholerae VpsT regulates matrix production and motility by directly sensing cyclic di-GMP
-
Krasteva, P. V., Fong, J. C., Shikuma, N. J., Beyhan, S., Navarro, M. V., Yildiz, F. H., and Sondermann, H. (2010) Vibrio cholerae VpsT regulates matrix production and motility by directly sensing cyclic di-GMP. Science 327, 866-868
-
(2010)
Science
, vol.327
, pp. 866-868
-
-
Krasteva, P.V.1
Fong, J.C.2
Shikuma, N.J.3
Beyhan, S.4
Navarro, M.V.5
Yildiz, F.H.6
Sondermann, H.7
-
28
-
-
70350436270
-
Cyclic di-GMP allosterically inhibits the CRP-like protein (Clp) of Xanthomonas axonopodis pv. citri
-
Leduc, J. L., and Roberts, G. P. (2009) Cyclic di-GMP allosterically inhibits the CRP-like protein (Clp) of Xanthomonas axonopodis pv. citri. J. Bacteriol. 191, 7121-7122
-
(2009)
J. Bacteriol.
, vol.191
, pp. 7121-7122
-
-
Leduc, J.L.1
Roberts, G.P.2
-
29
-
-
77949325119
-
The cAMP receptor-like protein CLP is a novel c-di-GMP receptor linking cell-cell signaling to virulence gene expression in Xanthomonas campestris
-
Chin, K. H., Lee, Y. C., Tu, Z. L., Chen, C. H., Tseng, Y. H., Yang, J. M., Ryan, R. P., McCarthy, Y., Dow, J. M., Wang, A. H., and Chou, S. H. (2010) The cAMP receptor-like protein CLP is a novel c-di-GMP receptor linking cell-cell signaling to virulence gene expression in Xanthomonas campestris. J. Mol. Biol. 396, 646-662
-
(2010)
J. Mol. Biol.
, vol.396
, pp. 646-662
-
-
Chin, K.H.1
Lee, Y.C.2
Tu, Z.L.3
Chen, C.H.4
Tseng, Y.H.5
Yang, J.M.6
Ryan, R.P.7
McCarthy, Y.8
Dow, J.M.9
Wang, A.H.10
Chou, S.H.11
-
30
-
-
75749117906
-
The cyclic nucleotide monophosphate domain of Xanthomonas campestris global regulator Clp defines a new class of cyclic di-GMP effectors
-
Tao, F., He, Y. W., Wu, D. H., Swarup, S., and Zhang, L. H. (2010) The cyclic nucleotide monophosphate domain of Xanthomonas campestris global regulator Clp defines a new class of cyclic di-GMP effectors. J. Bacteriol. 192, 1020-1029
-
(2010)
J. Bacteriol.
, vol.192
, pp. 1020-1029
-
-
Tao, F.1
He, Y.W.2
Wu, D.H.3
Swarup, S.4
Zhang, L.H.5
-
31
-
-
47249089614
-
Identification of FleQ from Pseudomonas aeruginosa as a c-di-GMP-responsive transcription factor
-
Hickman, J. W., and Harwood, C. S. (2008) Identification of FleQ from Pseudomonas aeruginosa as a c-di-GMP-responsive transcription factor. Mol. Microbiol. 69, 376-389
-
(2008)
Mol. Microbiol.
, vol.69
, pp. 376-389
-
-
Hickman, J.W.1
Harwood, C.S.2
-
32
-
-
68149172669
-
Structural analysis of the GGDEF-EAL domain-containing c-di-GMP receptor FimX
-
Navarro, M. V., De, N., Bae, N., Wang, Q., and Sondermann, H. (2009) Structural analysis of the GGDEF-EAL domain-containing c-di-GMP receptor FimX. Structure 17, 1104-1116
-
(2009)
Structure
, vol.17
, pp. 1104-1116
-
-
Navarro, M.V.1
De, N.2
Bae, N.3
Wang, Q.4
Sondermann, H.5
-
33
-
-
62549150834
-
LapD is a bis-(3′,5′)- cyclic dimeric GMP-binding protein that regulates surface attachment by Pseudomonas fluorescens Pf0-1
-
Newell, P. D., Monds, R. D., and O'Toole, G. A. (2009) LapD is a bis-(3′,5′)- cyclic dimeric GMP-binding protein that regulates surface attachment by Pseudomonas fluorescens Pf0-1. Proc. Natl. Acad. Sci. U.S.A. 106, 3461-3466
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 3461-3466
-
-
Newell, P.D.1
Monds, R.D.2
O'Toole, G.A.3
-
34
-
-
79952260048
-
Structural basis for c-di-GMP-mediated inside-out signaling controlling periplasmic proteolysis
-
Navarro, M. V., Newell, P. D., Krasteva, P. V., Chatterjee, D., Madden, D. R., O'Toole, G. A., and Sondermann, H. (2011) Structural basis for c-di-GMP-mediated inside-out signaling controlling periplasmic proteolysis. PLoS Biol. 9, e1000588
-
(2011)
PLoS Biol.
, vol.9
-
-
Navarro, M.V.1
Newell, P.D.2
Krasteva, P.V.3
Chatterjee, D.4
Madden, D.R.5
O'Toole, G.A.6
Sondermann, H.7
-
35
-
-
47749152941
-
Riboswitches in eubacteria sense the second messenger cyclic di-GMP
-
Sudarsan, N., Lee, E. R., Weinberg, Z., Moy, R. H., Kim, J. N., Link, K. H., and Breaker, R. R. (2008) Riboswitches in eubacteria sense the second messenger cyclic di-GMP. Science 321, 411-413
-
(2008)
Science
, vol.321
, pp. 411-413
-
-
Sudarsan, N.1
Lee, E.R.2
Weinberg, Z.3
Moy, R.H.4
Kim, J.N.5
Link, K.H.6
Breaker, R.R.7
-
36
-
-
70349968208
-
PILZ protein structure and interactions with PILB and the FIMX EAL domain. Implications for control of type IV pilus biogenesis
-
Guzzo, C. R., Salinas, R. K., Andrade, M. O., and Farah, C. S. (2009) PILZ protein structure and interactions with PILB and the FIMX EAL domain. Implications for control of type IV pilus biogenesis. J. Mol. Biol. 393, 848-866
-
(2009)
J. Mol. Biol.
, vol.393
, pp. 848-866
-
-
Guzzo, C.R.1
Salinas, R.K.2
Andrade, M.O.3
Farah, C.S.4
-
37
-
-
77950859347
-
Structure of PP4397 reveals the molecular basis for different c-di- GMP binding modes by Pilz domain proteins
-
Ko, J., Ryu, K. S., Kim, H., Shin, J. S., Lee, J. O., Cheong, C., and Choi, B. S. (2010) Structure of PP4397 reveals the molecular basis for different c-di- GMP binding modes by Pilz domain proteins. J. Mol. Biol. 398, 97-110
-
(2010)
J. Mol. Biol.
, vol.398
, pp. 97-110
-
-
Ko, J.1
Ryu, K.S.2
Kim, H.3
Shin, J.S.4
Lee, J.O.5
Cheong, C.6
Choi, B.S.7
-
38
-
-
66149087307
-
XC1028 from Xanthomonas campestris adopts a PilZ domain-like structure without a c-di-GMP switch
-
Li, T. N., Chin, K. H., Liu, J. H., Wang, A. H., and Chou, S. H. (2009) XC1028 from Xanthomonas campestris adopts a PilZ domain-like structure without a c-di-GMP switch. Proteins 75, 282-288
-
(2009)
Proteins
, vol.75
, pp. 282-288
-
-
Li, T.N.1
Chin, K.H.2
Liu, J.H.3
Wang, A.H.4
Chou, S.H.5
-
39
-
-
79956338019
-
Structural basis of differential ligand recognition by two classes of bis-(3′-5′)-cyclic dimeric guanosine monophosphate-binding ribo-switches
-
Smith, K. D., Shanahan, C. A., Moore, E. L., Simon, A. C., and Strobel, S. A. (2011) Structural basis of differential ligand recognition by two classes of bis-(3′-5′)-cyclic dimeric guanosine monophosphate-binding ribo-switches. Proc. Natl. Acad. Sci. U.S.A. 108, 7757-7762
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, pp. 7757-7762
-
-
Smith, K.D.1
Shanahan, C.A.2
Moore, E.L.3
Simon, A.C.4
Strobel, S.A.5
-
40
-
-
71449108155
-
Structural basis of ligand binding by a c-di-GMP riboswitch
-
Smith, K. D., Lipchock, S. V., Ames, T. D., Wang, J., Breaker, R. R., and Strobel, S. A. (2009) Structural basis of ligand binding by a c-di-GMP riboswitch. Nat. Struct. Mol. Biol. 16, 1218-1223
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 1218-1223
-
-
Smith, K.D.1
Lipchock, S.V.2
Ames, T.D.3
Wang, J.4
Breaker, R.R.5
Strobel, S.A.6
-
41
-
-
77956021842
-
Structural and biochemical determinants of ligand binding by the c-di-GMP riboswitch
-
Smith, K. D., Lipchock, S. V., Livingston, A. L., Shanahan, C. A., and Strobel, S. A. (2010) Structural and biochemical determinants of ligand binding by the c-di-GMP riboswitch. Biochemistry 49, 7351-7359
-
(2010)
Biochemistry
, vol.49
, pp. 7351-7359
-
-
Smith, K.D.1
Lipchock, S.V.2
Livingston, A.L.3
Shanahan, C.A.4
Strobel, S.A.5
-
42
-
-
34548303826
-
A cyclic di-GMP receptor required for bacterial exopolysaccharide production
-
Lee, V. T., Matewish, J. M., Kessler, J. L., Hyodo, M., Hayakawa, Y., and Lory, S. (2007) A cyclic di-GMP receptor required for bacterial exopolysaccharide production. Mol. Microbiol. 65, 1474-1484
-
(2007)
Mol. Microbiol.
, vol.65
, pp. 1474-1484
-
-
Lee, V.T.1
Matewish, J.M.2
Kessler, J.L.3
Hyodo, M.4
Hayakawa, Y.5
Lory, S.6
-
43
-
-
55549090691
-
Identification and characterization of cyclic diguanylate signaling systems controlling rugosity in Vibrio cholerae
-
Beyhan, S., Odell, L. S., and Yildiz, F. H. (2008) Identification and characterization of cyclic diguanylate signaling systems controlling rugosity in Vibrio cholerae. J. Bacteriol. 190, 7392-7405
-
(2008)
J. Bacteriol.
, vol.190
, pp. 7392-7405
-
-
Beyhan, S.1
Odell, L.S.2
Yildiz, F.H.3
-
44
-
-
1242297814
-
Genes involved in matrix formation in Pseudomonas aeruginosa PA14 biofilms
-
Friedman, L., and Kolter, R. (2004) Genes involved in matrix formation in Pseudomonas aeruginosa PA14 biofilms. Mol. Microbiol. 51, 675-690
-
(2004)
Mol. Microbiol.
, vol.51
, pp. 675-690
-
-
Friedman, L.1
Kolter, R.2
-
45
-
-
79551521160
-
The pel polysaccharide can serve a structural and protective role in the biofilm matrix of Pseudomonas aeruginosa
-
Colvin, K. M., Gordon, V. D., Murakami, K., Borlee, B. R., Wozniak, D. J., Wong, G. C., and Parsek, M. R. (2011) The pel polysaccharide can serve a structural and protective role in the biofilm matrix of Pseudomonas aeruginosa. PLoS Pathog. 7, e1001264
-
(2011)
PLoS Pathog.
, vol.7
-
-
Colvin, K.M.1
Gordon, V.D.2
Murakami, K.3
Borlee, B.R.4
Wozniak, D.J.5
Wong, G.C.6
Parsek, M.R.7
-
46
-
-
15844362276
-
The pel genes of the Pseudomonas aeruginosa PAK strain are involved at early and late stages of biofilm formation
-
Vasseur, P., Vallet-Gely, I., Soscia, C., Genin, S., and Filloux, A. (2005) The pel genes of the Pseudomonas aeruginosa PAK strain are involved at early and late stages of biofilm formation. Microbiology 151, 985-997
-
(2005)
Microbiology
, vol.151
, pp. 985-997
-
-
Vasseur, P.1
Vallet-Gely, I.2
Soscia, C.3
Genin, S.4
Filloux, A.5
-
47
-
-
34447272508
-
PelC is a Pseudomonas aeruginosa outer membrane lipoprotein of the OMA family of proteins involved in exopolysaccharide transport
-
Vasseur, P., Soscia, C., Voulhoux, R., and Filloux, A. (2007) PelC is a Pseudomonas aeruginosa outer membrane lipoprotein of the OMA family of proteins involved in exopolysaccharide transport. Biochimie 89, 903-915
-
(2007)
Biochimie
, vol.89
, pp. 903-915
-
-
Vasseur, P.1
Soscia, C.2
Voulhoux, R.3
Filloux, A.4
-
48
-
-
26444582915
-
A chemosensory system that regulates biofilm formation through modulation of cyclic diguanylate levels
-
Hickman, J. W., Tifrea, D. F., and Harwood, C. S. (2005) A chemosensory system that regulates biofilm formation through modulation of cyclic diguanylate levels. Proc. Natl. Acad. Sci. U.S.A. 102, 14422-14427
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 14422-14427
-
-
Hickman, J.W.1
Tifrea, D.F.2
Harwood, C.S.3
-
49
-
-
0038414570
-
Multiparametric scaling of diffraction intensities
-
Otwinowski, Z., Borek, D., Majewski, W., and Minor, W. (2003) Multiparametric scaling of diffraction intensities. Acta Crystallogr. A 59, 228-234
-
(2003)
Acta Crystallogr. A
, vol.59
, pp. 228-234
-
-
Otwinowski, Z.1
Borek, D.2
Majewski, W.3
Minor, W.4
-
50
-
-
34447508216
-
Phaser crystallographic software
-
McCoy, A. J., Grosse-Kunstleve, R. W., Adams, P. D., Winn, M. D., Storoni, L. C., and Read, R. J. (2007) Phaser crystallographic software. J. Appl. Crystallogr. 40, 658-674
-
(2007)
J. Appl. Crystallogr.
, vol.40
, pp. 658-674
-
-
McCoy, A.J.1
Grosse-Kunstleve, R.W.2
Adams, P.D.3
Winn, M.D.4
Storoni, L.C.5
Read, R.J.6
-
52
-
-
14244272868
-
PHENIX, building new software for automated crystallographic structure determination
-
Adams, P. D., Grosse-Kunstleve, R. W., Hung, L. W., Ioerger, T. R., Mc- Coy, A. J., Moriarty, N. W., Read, R. J., Sacchettini, J. C., Sauter, N. K., and Terwilliger, T. C. (2002) PHENIX, building new software for automated crystallographic structure determination. Acta Crystallogr. D Biol. Crystallogr. 58, 1948-1954
-
(2002)
Acta Crystallogr. D Biol. Crystallogr.
, vol.58
, pp. 1948-1954
-
-
Adams, P.D.1
Grosse-Kunstleve, R.W.2
Hung, L.W.3
Ioerger, T.R.4
Mc-Coy, A.J.5
Moriarty, N.W.6
Read, R.J.7
Sacchettini, J.C.8
Sauter, N.K.9
Terwilliger, T.C.10
-
53
-
-
0000449646
-
Improvement of macromolecular electron- density maps by the simultaneous application of real and reciprocal space constraints
-
Cowtan, K. D., and Main, P. (1993) Improvement of macromolecular electron- density maps by the simultaneous application of real and reciprocal space constraints. Acta Crystallogr. D Biol. Crystallogr. 49, 148-157
-
(1993)
Acta Crystallogr. D Biol. Crystallogr.
, vol.49
, pp. 148-157
-
-
Cowtan, K.D.1
Main, P.2
-
54
-
-
0032964481
-
Automated protein model building combined with iterative structure refinement
-
Perrakis, A., Morris, R., and Lamzin, V. S. (1999) Automated protein model building combined with iterative structure refinement. Nat. Struct. Biol. 6, 458-463
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 458-463
-
-
Perrakis, A.1
Morris, R.2
Lamzin, V.S.3
-
55
-
-
0032790081
-
XtalView/Xfit. A versatile program for manipulating atomic coordinates and electron density
-
McRee, D. E. (1999) XtalView/Xfit. A versatile program for manipulating atomic coordinates and electron density. J. Struct. Biol. 125, 156-165
-
(1999)
J. Struct. Biol.
, vol.125
, pp. 156-165
-
-
McRee, D.E.1
-
56
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
Murshudov, G. N., Vagin, A. A., and Dodson, E. J. (1997) Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr. D Biol. Crystallogr. 53, 240-255
-
(1997)
Acta Crystallogr. D Biol. Crystallogr.
, vol.53
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
57
-
-
79251615811
-
Efficient enzymatic production of the bacterial second messenger c-di-GMP by the diguanylate cyclase YdeH from E. coli
-
Zähringer, F., Massa, C., and Schirmer, T. (2011) Efficient enzymatic production of the bacterial second messenger c-di-GMP by the diguanylate cyclase YdeH from E. coli. Appl. Biochem. Biotechnol. 163, 71-79
-
(2011)
Appl. Biochem. Biotechnol.
, vol.163
, pp. 71-79
-
-
Zähringer, F.1
Massa, C.2
Schirmer, T.3
-
58
-
-
47049115663
-
Catalytic mechanism of cyclic di-GMP-specific phosphodiesterase. A study of the EAL domain-containing RocR from Pseudomonas aeruginosa
-
Rao, F., Yang, Y., Qi, Y., and Liang, Z. X. (2008) Catalytic mechanism of cyclic di-GMP-specific phosphodiesterase. A study of the EAL domain-containing RocR from Pseudomonas aeruginosa. J. Bacteriol. 190, 3622-3631
-
(2008)
J. Bacteriol.
, vol.190
, pp. 3622-3631
-
-
Rao, F.1
Yang, Y.2
Qi, Y.3
Liang, Z.X.4
-
59
-
-
34548232365
-
Inference of macromolecular assemblies from crystalline state
-
Krissinel, E., and Henrick, K. (2007) Inference of macromolecular assemblies from crystalline state. J. Mol. Biol. 372, 774-797
-
(2007)
J. Mol. Biol.
, vol.372
, pp. 774-797
-
-
Krissinel, E.1
Henrick, K.2
-
60
-
-
77954288774
-
DALI server. Conservation mapping in three-dimension
-
Holm, L., and Rosenström, P. (2010) DALI server. Conservation mapping in three-dimension. Nucleic Acids Res. 38, W545-549
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Holm, L.1
Rosenström, P.2
-
61
-
-
78649675368
-
Conformation changes, N-terminal involvement, and cGMP signal relay in the phosphodiesterase-5 GAF domain
-
Wang, H., Robinson, H., and Ke, H. (2010) Conformation changes, N-terminal involvement, and cGMP signal relay in the phosphodiesterase-5 GAF domain. J. Biol. Chem. 285, 38149-38156
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 38149-38156
-
-
Wang, H.1
Robinson, H.2
Ke, H.3
-
62
-
-
0030712081
-
The GAF domain. An evolutionary link between diverse phototransducing proteins
-
Aravind, L., and Ponting, C. P. (1997) The GAF domain. An evolutionary link between diverse phototransducing proteins. Trends Biochem. Sci. 22, 458-459
-
(1997)
Trends Biochem. Sci.
, vol.22
, pp. 458-459
-
-
Aravind, L.1
Ponting, C.P.2
-
63
-
-
1642457208
-
Properties and functions of GAF domains in cyclic nucleotide phosphodiesterases and other proteins
-
Zoraghi, R., Corbin, J. D., and Francis, S. H. (2004) Properties and functions of GAF domains in cyclic nucleotide phosphodiesterases and other proteins. Mol. Pharmacol. 65, 267-278
-
(2004)
Mol. Pharmacol.
, vol.65
, pp. 267-278
-
-
Zoraghi, R.1
Corbin, J.D.2
Francis, S.H.3
-
64
-
-
0036790852
-
The two GAF domains in phosphodiesterase 2A have distinct roles in dimerization and in cGMP binding
-
Martinez, S. E., Wu, A. Y., Glavas, N. A., Tang, X. B., Turley, S., Hol, W. G., and Beavo, J. A. (2002) The two GAF domains in phosphodiesterase 2A have distinct roles in dimerization and in cGMP binding. Proc. Natl. Acad. Sci. U.S.A. 99, 13260-13265
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 13260-13265
-
-
Martinez, S.E.1
Wu, A.Y.2
Glavas, N.A.3
Tang, X.B.4
Turley, S.5
Hol, W.G.6
Beavo, J.A.7
-
65
-
-
70849084890
-
Mechanism for the allosteric regulation of phosphodiesterase 2A deduced from the x-ray structure of a near full-length construct
-
Pandit, J., Forman, M. D., Fennell, K. F., Dillman, K. S., and Menniti, F. S. (2009) Mechanism for the allosteric regulation of phosphodiesterase 2A deduced from the x-ray structure of a near full-length construct. Proc. Natl. Acad. Sci. U.S.A. 106, 18225-18230
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 18225-18230
-
-
Pandit, J.1
Forman, M.D.2
Fennell, K.F.3
Dillman, K.S.4
Menniti, F.S.5
-
66
-
-
54449087235
-
The structure of the GAF A domain from phosphodiesterase 6C reveals determinants of cGMP binding, a conserved binding surface, and a large cGMP-dependent conformational change
-
Martinez, S. E., Heikaus, C. C., Klevit, R. E., and Beavo, J. A. (2008) The structure of the GAF A domain from phosphodiesterase 6C reveals determinants of cGMP binding, a conserved binding surface, and a large cGMP-dependent conformational change. J. Biol. Chem. 283, 25913-25919
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 25913-25919
-
-
Martinez, S.E.1
Heikaus, C.C.2
Klevit, R.E.3
Beavo, J.A.4
-
67
-
-
50349084137
-
Crystal structure of the GAF-B domain from human phosphodiesterase 10A complexed with its ligand, cAMP
-
Handa, N., Mizohata, E., Kishishita, S., Toyama, M., Morita, S., Uchikubo- Kamo, T., Akasaka, R., Omori, K., Kotera, J., Terada, T., Shirouzu, M., and Yokoyama, S. (2008) Crystal structure of the GAF-B domain from human phosphodiesterase 10A complexed with its ligand, cAMP. J. Biol. Chem. 283, 19657-19664
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 19657-19664
-
-
Handa, N.1
Mizohata, E.2
Kishishita, S.3
Toyama, M.4
Morita, S.5
Uchikubo-Kamo, T.6
Akasaka, R.7
Omori, K.8
Kotera, J.9
Terada, T.10
Shirouzu, M.11
Yokoyama, S.12
-
68
-
-
14544297871
-
Crystal structure of the tandem GAF domains from a cyanobacterial adenylyl cyclase. Modes of ligand binding and dimerization
-
Martinez, S. E., Bruder, S., Schultz, A., Zheng, N., Schultz, J. E., Beavo, J. A., and Linder, J. U. (2005) Crystal structure of the tandem GAF domains from a cyanobacterial adenylyl cyclase. Modes of ligand binding and dimerization. Proc. Natl. Acad. Sci. U.S.A. 102, 3082-3087
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 3082-3087
-
-
Martinez, S.E.1
Bruder, S.2
Schultz, A.3
Zheng, N.4
Schultz, J.E.5
Beavo, J.A.6
Linder, J.U.7
-
69
-
-
0032489464
-
Structural features of the noncatalytic cGMP binding sites of frog photoreceptor phosphodiesterase using cGMP analogs
-
Hebert, M. C., Schwede, F., Jastorff, B., and Cote, R. H. (1998) Structural features of the noncatalytic cGMP binding sites of frog photoreceptor phosphodiesterase using cGMP analogs. J. Biol. Chem. 273, 5557-5565
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 5557-5565
-
-
Hebert, M.C.1
Schwede, F.2
Jastorff, B.3
Cote, R.H.4
-
70
-
-
9144263723
-
Molecular determinants of cGMP binding to chicken cone photoreceptor phosphodiesterase
-
Huang, D., Hinds, T. R., Martinez, S. E., Doneanu, C., and Beavo, J. A. (2004) Molecular determinants of cGMP binding to chicken cone photoreceptor phosphodiesterase. J. Biol. Chem. 279, 48143-48151
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 48143-48151
-
-
Huang, D.1
Hinds, T.R.2
Martinez, S.E.3
Doneanu, C.4
Beavo, J.A.5
-
71
-
-
53049094120
-
Solution structure of the cGMP binding GAF domain from phosphodiesterase 5. Insights into nucleotide specificity, dimerization, and cGMP-dependent conformational change
-
Heikaus, C. C., Stout, J. R., Sekharan, M. R., Eakin, C. M., Rajagopal, P., Brzovic, P. S., Beavo, J. A., and Klevit, R. E. (2008) Solution structure of the cGMP binding GAF domain from phosphodiesterase 5. Insights into nucleotide specificity, dimerization, and cGMP-dependent conformational change. J. Biol. Chem. 283, 22749-22759
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 22749-22759
-
-
Heikaus, C.C.1
Stout, J.R.2
Sekharan, M.R.3
Eakin, C.M.4
Rajagopal, P.5
Brzovic, P.S.6
Beavo, J.A.7
Klevit, R.E.8
-
72
-
-
4444349218
-
Molecular determinants for cyclic nucleotide binding to the regulatory domains of phosphodiesterase 2A
-
Wu, A. Y., Tang, X. B., Martinez, S. E., Ikeda, K., and Beavo, J. A. (2004) Molecular determinants for cyclic nucleotide binding to the regulatory domains of phosphodiesterase 2A. J. Biol. Chem. 279, 37928-37938
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 37928-37938
-
-
Wu, A.Y.1
Tang, X.B.2
Martinez, S.E.3
Ikeda, K.4
Beavo, J.A.5
-
73
-
-
15744369740
-
Structural and functional features in human PDE5A1 regulatory domain that provide for allosteric cGMP binding, dimerization, and regulation
-
Zoraghi, R., Bessay, E. P., Corbin, J. D., and Francis, S. H. (2005) Structural and functional features in human PDE5A1 regulatory domain that provide for allosteric cGMP binding, dimerization, and regulation. J. Biol. Chem. 280, 12051-12063
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 12051-12063
-
-
Zoraghi, R.1
Bessay, E.P.2
Corbin, J.D.3
Francis, S.H.4
-
74
-
-
71249129667
-
Cyclic nucleotide binding GAF domains from phosphodiesterases. Structural and mechanistic insights
-
Heikaus, C. C., Pandit, J., and Klevit, R. E. (2009) Cyclic nucleotide binding GAF domains from phosphodiesterases. Structural and mechanistic insights. Structure 17, 1551-1557
-
(2009)
Structure
, vol.17
, pp. 1551-1557
-
-
Heikaus, C.C.1
Pandit, J.2
Klevit, R.E.3
-
75
-
-
0019305709
-
Involvement of cyclicGMP in intracellular signaling in the chemotactic response of Escherichia coli
-
Black, R. A., Hobson, A. C., and Adler, J. (1980) Involvement of cyclicGMP in intracellular signaling in the chemotactic response of Escherichia coli. Proc. Natl. Acad. Sci. U.S.A. 77, 3879-3883
-
(1980)
Proc. Natl. Acad. Sci. U.S.A.
, vol.77
, pp. 3879-3883
-
-
Black, R.A.1
Hobson, A.C.2
Adler, J.3
-
76
-
-
0034676026
-
Structure of the GAF domain, a ubiquitous signaling motif and a new class of cyclic GMP receptor
-
Ho, Y. S., Burden, L. M., and Hurley, J. H. (2000) Structure of the GAF domain, a ubiquitous signaling motif and a new class of cyclic GMP receptor. EMBO J. 19, 5288-5299
-
(2000)
EMBO J.
, vol.19
, pp. 5288-5299
-
-
Ho, Y.S.1
Burden, L.M.2
Hurley, J.H.3
-
77
-
-
77955299408
-
Structural and biochemical characterization of free methionine-R- sulfoxide reductase from Neisseria meningitidis
-
Gruez, A., Libiad, M., Boschi-Muller, S., and Branlant, G. (2010) Structural and biochemical characterization of free methionine-R-sulfoxide reductase from Neisseria meningitidis. J. Biol. Chem. 285, 25033-25043
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 25033-25043
-
-
Gruez, A.1
Libiad, M.2
Boschi-Muller, S.3
Branlant, G.4
-
78
-
-
82455163827
-
The structure and inhibition of a GGDEF diguanylate cyclase complexed with (c-di-GMP)(2) at the active site
-
Yang, C. Y., Chin, K. H., Chuah, M. L., Liang, Z. X., Wang, A. H., and Chou, S. H. (2011) The structure and inhibition of a GGDEF diguanylate cyclase complexed with (c-di-GMP)(2) at the active site. Acta Crystallogr. D Biol. Crystallogr. 67, 997-1008
-
(2011)
Acta Crystallogr. D Biol. Crystallogr.
, vol.67
, pp. 997-1008
-
-
Yang, C.Y.1
Chin, K.H.2
Chuah, M.L.3
Liang, Z.X.4
Wang, A.H.5
Chou, S.H.6
-
79
-
-
0020038738
-
Purification and characterization of a cyclic GMP-stimulated cyclic nucleotide phosphodiesterase from bovine tissues
-
Martins, T. J., Mumby, M. C., and Beavo, J. A. (1982) Purification and characterization of a cyclic GMP-stimulated cyclic nucleotide phosphodiesterase from bovine tissues. J. Biol. Chem. 257, 1973-1979
-
(1982)
J. Biol. Chem.
, vol.257
, pp. 1973-1979
-
-
Martins, T.J.1
Mumby, M.C.2
Beavo, J.A.3
-
80
-
-
0037415730
-
PDE5 is converted to an activated state upon cGMP binding to the GAF A domain
-
Rybalkin, S. D., Rybalkina, I. G., Shimizu-Albergine, M., Tang, X. B., and Beavo, J. A. (2003) PDE5 is converted to an activated state upon cGMP binding to the GAF A domain. EMBO J. 22, 469-478
-
(2003)
EMBO J.
, vol.22
, pp. 469-478
-
-
Rybalkin, S.D.1
Rybalkina, I.G.2
Shimizu-Albergine, M.3
Tang, X.B.4
Beavo, J.A.5
-
81
-
-
0042859823
-
Cyclic GMPphosphodiesterases and regulation of smooth muscle function
-
Rybalkin, S. D., Yan, C., Bornfeldt, K. E., and Beavo, J. A. (2003) Cyclic GMPphosphodiesterases and regulation of smooth muscle function. Circ. Res. 93, 280-291
-
(2003)
Circ. Res.
, vol.93
, pp. 280-291
-
-
Rybalkin, S.D.1
Yan, C.2
Bornfeldt, K.E.3
Beavo, J.A.4
-
82
-
-
0037033002
-
Phosphorylation of isolated human phosphodiesterase- 5 regulatory domain induces an apparent conformational change and increases cGMP binding affinity
-
Francis, S. H., Bessay, E. P., Kotera, J., Grimes, K. A., Liu, L., Thompson, W. J., and Corbin, J. D. (2002) Phosphorylation of isolated human phosphodiesterase- 5 regulatory domain induces an apparent conformational change and increases cGMP binding affinity. J. Biol. Chem. 277, 47581-47587
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 47581-47587
-
-
Francis, S.H.1
Bessay, E.P.2
Kotera, J.3
Grimes, K.A.4
Liu, L.5
Thompson, W.J.6
Corbin, J.D.7
-
83
-
-
14244254898
-
Cyclic diguanylate is a ubiquitous signaling molecule in bacteria. Insights into biochemistry of the GGDEF protein domain
-
Ryjenkov, D. A., Tarutina, M., Moskvin, O. V., and Gomelsky, M. (2005) Cyclic diguanylate is a ubiquitous signaling molecule in bacteria. Insights into biochemistry of the GGDEF protein domain. J. Bacteriol. 187, 1792-1798
-
(2005)
J. Bacteriol.
, vol.187
, pp. 1792-1798
-
-
Ryjenkov, D.A.1
Tarutina, M.2
Moskvin, O.V.3
Gomelsky, M.4
-
84
-
-
84861918212
-
A full-length bifunctional protein involved in c-di- GMPturnover is required for long term survival under nutrient starvation in Mycobacterium smegmatis
-
Bharati, B. K., Sharma, I. M., Kasetty, S., Kumar, M., Mukherjee, R., and Chatterji, D. (2012) A full-length bifunctional protein involved in c-di- GMPturnover is required for long term survival under nutrient starvation in Mycobacterium smegmatis. Microbiology 158, 1415-1427
-
(2012)
Microbiology
, vol.158
, pp. 1415-1427
-
-
Bharati, B.K.1
Sharma, I.M.2
Kasetty, S.3
Kumar, M.4
Mukherjee, R.5
Chatterji, D.6
-
85
-
-
20444363484
-
Structural determinants for inhibitor specificity and selectivity in PDE2A using the wheat germ in vitro translation system
-
Iffland, A., Kohls, D., Low, S., Luan, J., Zhang, Y., Kothe, M., Cao, Q., Kamath, A. V., Ding, Y. H., and Ellenberger, T. (2005) Structural determinants for inhibitor specificity and selectivity in PDE2A using the wheat germ in vitro translation system. Biochemistry 44, 8312-8325
-
(2005)
Biochemistry
, vol.44
, pp. 8312-8325
-
-
Iffland, A.1
Kohls, D.2
Low, S.3
Luan, J.4
Zhang, Y.5
Kothe, M.6
Cao, Q.7
Kamath, A.V.8
Ding, Y.H.9
Ellenberger, T.10
-
86
-
-
33746342145
-
Multiple conformations of phosphodiesterase-5. Implications for enzyme function and drug development
-
Wang, H., Liu, Y., Huai, Q., Cai, J., Zoraghi, R., Francis, S. H., Corbin, J. D., Robinson, H., Xin, Z., Lin, G., and Ke, H. (2006) Multiple conformations of phosphodiesterase-5. Implications for enzyme function and drug development. J. Biol. Chem. 281, 21469-21479
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 21469-21479
-
-
Wang, H.1
Liu, Y.2
Huai, Q.3
Cai, J.4
Zoraghi, R.5
Francis, S.H.6
Corbin, J.D.7
Robinson, H.8
Xin, Z.9
Lin, G.10
Ke, H.11
-
87
-
-
0041321268
-
Structure of the catalytic domain of human phosphodiesterase 5 with bound drug molecules
-
Sung, B. J., Hwang, K. Y., Jeon, Y. H., Lee, J. I., Heo, Y. S., Kim, J. H., Moon, J., Yoon, J. M., Hyun, Y. L., Kim, E., Eum, S. J., Park, S. Y., Lee, J. O., Lee, T. G., Ro, S., and Cho, J. M. (2003) Structure of the catalytic domain of human phosphodiesterase 5 with bound drug molecules. Nature 425, 98-102
-
(2003)
Nature
, vol.425
, pp. 98-102
-
-
Sung, B.J.1
Hwang, K.Y.2
Jeon, Y.H.3
Lee, J.I.4
Heo, Y.S.5
Kim, J.H.6
Moon, J.7
Yoon, J.M.8
Hyun, Y.L.9
Kim, E.10
Eum, S.J.11
Park, S.Y.12
Lee, J.O.13
Lee, T.G.14
Ro, S.15
Cho, J.M.16
-
88
-
-
33846451429
-
Discovery of a series of 6,7-dimethoxy-4-pyrrolidylquinazoline PDE10A inhibitors
-
Chappie, T. A., Humphrey, J. M., Allen, M. P., Estep, K. G., Fox, C. B., Lebel, L. A., Liras, S., Marr, E. S., Menniti, F. S., Pandit, J., Schmidt, C. J., Tu, M., Williams, R. D., and Yang, F. V. (2007) Discovery of a series of 6,7-dimethoxy-4-pyrrolidylquinazoline PDE10A inhibitors. J. Med. Chem. 50, 182-185
-
(2007)
J. Med. Chem.
, vol.50
, pp. 182-185
-
-
Chappie, T.A.1
Humphrey, J.M.2
Allen, M.P.3
Estep, K.G.4
Fox, C.B.5
Lebel, L.A.6
Liras, S.7
Marr, E.S.8
Menniti, F.S.9
Pandit, J.10
Schmidt, C.J.11
Tu, M.12
Williams, R.D.13
Yang, F.V.14
-
89
-
-
61449200221
-
Gene expression patterns and differential input into curli fimbriae regulation of all GGDEF/EAL domain proteins in Escherichia coli
-
Sommerfeldt, N., Possling, A., Becker, G., Pesavento, C., Tschowri, N., and Hengge, R. (2009) Gene expression patterns and differential input into curli fimbriae regulation of all GGDEF/EAL domain proteins in Escherichia coli. Microbiology 155, 1318-1331
-
(2009)
Microbiology
, vol.155
, pp. 1318-1331
-
-
Sommerfeldt, N.1
Possling, A.2
Becker, G.3
Pesavento, C.4
Tschowri, N.5
Hengge, R.6
-
90
-
-
33645819810
-
Hierarchical involvement of various GGDEF domain proteins in rdar morphotype development of Salmonella enterica serovar Typhimurium
-
Kader, A., Simm, R., Gerstel, U., Morr, M., and Römling, U. (2006) Hierarchical involvement of various GGDEF domain proteins in rdar morphotype development of Salmonella enterica serovar Typhimurium. Mol. Microbiol. 60, 602-616
-
(2006)
Mol. Microbiol.
, vol.60
, pp. 602-616
-
-
Kader, A.1
Simm, R.2
Gerstel, U.3
Morr, M.4
Römling, U.5
-
91
-
-
58149203237
-
CDD, specific functional annotation with the Conserved Domain Database
-
Marchler-Bauer, A., Anderson, J. B., Chitsaz, F., Derbyshire, M. K., DeWeese- Scott, C., Fong, J. H., Geer, L. Y., Geer, R. C., Gonzales, N. R., Gwadz, M., He, S., Hurwitz, D. I., Jackson, J. D., Ke, Z., Lanczycki, C. J., Liebert, C. A., Liu, C., Lu, F., Lu, S., Marchler, G. H., Mullokandov, M., Song, J. S., Tasneem, A., Thanki, N., Yamashita, R. A., Zhang, D., Zhang, N., and Bryant, S. H. (2009) CDD, specific functional annotation with the Conserved Domain Database. Nucleic Acids Res. 37, D205-210
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Marchler-Bauer, A.1
Anderson, J.B.2
Chitsaz, F.3
Derbyshire, M.K.4
DeWeese-Scott, C.5
Fong, J.H.6
Geer, L.Y.7
Geer, R.C.8
Gonzales, N.R.9
Gwadz, M.10
He, S.11
Hurwitz, D.I.12
Jackson, J.D.13
Ke, Z.14
Lanczycki, C.J.15
Liebert, C.A.16
Liu, C.17
Lu, F.18
Lu, S.19
Marchler, G.H.20
Mullokandov, M.21
Song, J.S.22
Tasneem, A.23
Thanki, N.24
Yamashita, R.A.25
Zhang, D.26
Zhang, N.27
Bryant, S.H.28
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