-
1
-
-
0035997389
-
RNA editing by adenosine deaminases that act on RNA
-
DOI 10.1146/annurev.biochem.71.110601.135501
-
Bass BL. 2002. RNA editing by adenosine deaminases that act on RNA. Annu Rev Biochem 71: 817-846. (Pubitemid 34800236)
-
(2002)
Annual Review of Biochemistry
, vol.71
, pp. 817-846
-
-
Bass, B.L.1
-
2
-
-
0037449753
-
C-to-U RNA editing: Mechanisms leading to genetic diversity
-
DOI 10.1074/jbc.R200024200
-
Blanc V, Davidson NO. 2003. C-to-U RNA editing: mechanisms leading to genetic diversity. J Biol Chem 278: 1395-1398. (Pubitemid 36801361)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.3
, pp. 1395-1398
-
-
Blanc, V.1
Davidson, N.O.2
-
3
-
-
0030916712
-
Regulation of serotonin-2C receptor G-protein coupling by RNA editing
-
DOI 10.1038/387303a0
-
Burns CM, Chu H, Rueter SM, Hutchinson LK, Canton H, Sanders-Bush E, Emeson RB. 1997. Regulation of serotonin-2C receptor G-protein coupling by RNA editing. Nature 387: 303-308. (Pubitemid 27220768)
-
(1997)
Nature
, vol.387
, Issue.6630
, pp. 303-308
-
-
Burns, C.M.1
Chu, H.2
Rueter, S.M.3
Hutchinson, L.K.4
Canton, H.5
Sanders-Bush, E.6
Emeson, R.B.7
-
4
-
-
0031574065
-
The effect of structure in a long target RNA on ribozyme cleavage efficiency
-
DOI 10.1093/nar/25.24.4985
-
Campbell TB, McDonald CK, Hagen M. 1997. The effect of structure in a long target RNA on ribozyme cleavage efficiency. Nucleic Acids Res 25: 4985-4993. (Pubitemid 28022260)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.24
, pp. 4985-4993
-
-
Campbell, T.B.1
McDonald, C.K.2
Hagen, M.3
-
5
-
-
79953675394
-
Trans-cleaving hammerhead ribozymes with tertiary stabilizing motifs: In vitro and in vivo activity against a structured viroid RNA
-
Carbonell A, Flores R, Gago S. 2011. Trans-cleaving hammerhead ribozymes with tertiary stabilizing motifs: in vitro and in vivo activity against a structured viroid RNA. Nucleic Acids Res 39: 2432-2444.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 2432-2444
-
-
Carbonell, A.1
Flores, R.2
Gago, S.3
-
6
-
-
0036864328
-
Intracellular ribozyme applications
-
DOI 10.1042/BST0301140
-
Castanotto D, Li JR, Michienzi A, Langlois MA, Lee NS, Puymirat J, Rossi JJ. 2002. Intracellular ribozyme applications. Biochem Soc Trans 30: 1140-1145. (Pubitemid 36002425)
-
(2002)
Biochemical Society Transactions
, vol.30
, Issue.6
, pp. 1140-1145
-
-
Castanotto, D.1
Li, J.R.2
Michienzi, A.3
Langlois, M.-A.4
Lee, N.S.5
Puymirat, J.6
Rossi, J.J.7
-
7
-
-
0023617743
-
Apolipoprotein B-48 is the product of a messenger RNA with an organ-specific in-frame stop codon
-
Chen SH, Habib G, Yang CY, Gu ZW, Lee BR, Weng SA, Silberman SR, Cai SJ, Deslypere JP, Rosseneu M, et al. 1987. Apolipoprotein B-48 is the product of a messenger RNA with an organ-specific inframe stop codon. Science 238: 363-366. (Pubitemid 17151728)
-
(1987)
Science
, vol.238
, Issue.4825
, pp. 363-366
-
-
Chen, S.-H.1
Habib, G.2
Yang, C.-Y.3
Gu, Z.-W.4
Lee, B.R.5
Weng, S.-A.6
Silberman, S.R.7
Cai, S.-J.8
Deslypere, J.P.9
Rosseneu, M.10
Gotto Jr., A.M.11
Li, W.-H.12
Chan, L.13
-
9
-
-
13844272635
-
Synthetic hammerhead ribozymes as therapeutic tools to control disease genes
-
Citti L, Rainaldi G. 2005. Synthetic hammerhead ribozymes as therapeutic tools to control disease genes. Curr Gene Ther 5: 11-24. (Pubitemid 40246739)
-
(2005)
Current Gene Therapy
, vol.5
, Issue.1
, pp. 11-24
-
-
Citti, L.1
Rainaldi, G.2
-
10
-
-
0034668040
-
Hammerhead ribozymes selectively suppress mutant type I collagen mRNA in osteogenesis imperfecta fibroblasts
-
Dawson PA, Marini JC. 2000. Hammerhead ribozymes selectively suppress mutant type I collagen mRNA in osteogenesis imperfecta fibroblasts. Nucleic Acids Res 28: 4013-4020.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 4013-4020
-
-
Dawson, P.A.1
Marini, J.C.2
-
11
-
-
0142105383
-
Peripheral regions of natural hammerhead ribozymes greatly increase their self-cleavage activity
-
DOI 10.1093/emboj/cdg530
-
De la Peña M, Gago S, Flores R. 2003. Peripheral regions of natural hammerhead ribozymes greatly increase their self-cleavage activity. EMBO J 22: 5561-5570. (Pubitemid 37279965)
-
(2003)
EMBO Journal
, vol.22
, Issue.20
, pp. 5561-5570
-
-
De La, P.M.1
Gago, S.2
Flores, R.3
-
12
-
-
79956271523
-
Predicting sites of ADAR editing in double-stranded RNA
-
doi: 10.1038/ncomms1324
-
Eggington JM, Greene T, Bass BL. 2011. Predicting sites of ADAR editing in double-stranded RNA. Nat Commun 2: 319. doi: 10.1038/ncomms1324.
-
(2011)
Nat Commun
, vol.2
, pp. 319
-
-
Eggington, J.M.1
Greene, T.2
Bass, B.L.3
-
13
-
-
77951922861
-
Molecular diversity through RNA editing: A balancing act
-
Farajollahi S, Maas S. 2010. Molecular diversity through RNA editing: a balancing act. Trends Genet 26: 221-230.
-
(2010)
Trends Genet
, vol.26
, pp. 221-230
-
-
Farajollahi, S.1
Maas, S.2
-
14
-
-
52949095033
-
Screening of human SNP database identifies recoding sites of A-to-I RNA editing
-
Gommans WM, Tatalias NE, Sie CP, Dupuis D, Vendetti N, Smith L, Kaushal R, Maas S. 2008. Screening of human SNP database identifies recoding sites of A-to-I RNA editing. RNA 14: 2074-2085.
-
(2008)
RNA
, vol.14
, pp. 2074-2085
-
-
Gommans, W.M.1
Tatalias, N.E.2
Sie, C.P.3
Dupuis, D.4
Vendetti, N.5
Smith, L.6
Kaushal, R.7
Maas, S.8
-
15
-
-
0036244202
-
Hammerhead ribozymes for target validation
-
DOI 10.1517/14728222.6.2.235
-
Goodchild J. 2002. Hammerhead ribozymes for target validation. Expert Opin Ther Targets 6: 235-247. (Pubitemid 34477463)
-
(2002)
Expert Opinion on Therapeutic Targets
, vol.6
, Issue.2
, pp. 235-247
-
-
Goodchild, J.1
-
16
-
-
0024291288
-
Simple RNA enzymes with new and highly specific endoribonuclease activities
-
Haseloff J, Gerlach WL. 1988. Simple RNA enzymes with new and highly specific endoribonuclease activities. Nature 334: 585-591.
-
(1988)
Nature
, vol.334
, pp. 585-591
-
-
Haseloff, J.1
Gerlach, W.L.2
-
17
-
-
0027772363
-
RNA editing of AMPA receptor subunit GluR-B: A base-paired intron-exon structure determines position and efficiency
-
DOI 10.1016/0092-8674(93)90622-W
-
Higuchi M, Single FN, Kohler M, Sommer B, Sprengel R, Seeburg PH. 1993. RNA editing of AMPA receptor subunit GluR-B: a basepaired intron-exon structure determines position and efficiency. Cell 75: 1361-1370. (Pubitemid 24021910)
-
(1993)
Cell
, vol.75
, Issue.7
, pp. 1361-1370
-
-
Higuchi, M.1
Single, F.N.2
Kohler, M.3
Sommer, B.4
Sprengel, R.5
Seeburg, P.H.6
-
18
-
-
1842870632
-
The size of hammerhead ribozymes is related to cleavage kinetics: The role of substrate length
-
DOI 10.1016/S0300-9084(02)01461-X, PII S030090840201461X
-
Hormes R, Sczakiel G. 2002. The size of hammerhead ribozymes is related to cleavage kinetics: the role of substrate length. Biochimie 84: 897-903. (Pubitemid 35422916)
-
(2002)
Biochimie
, vol.84
, Issue.9
, pp. 897-903
-
-
Hormes, R.1
Sczakiel, G.2
-
19
-
-
0043009734
-
Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity
-
DOI 10.1038/nsb959
-
Khvorova A, Lescoute A, Westhof E, Jayasena SD. 2003. Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity. Nat Struct Biol 10: 708-712. (Pubitemid 37052408)
-
(2003)
Nature Structural Biology
, vol.10
, Issue.9
, pp. 708-712
-
-
Khvorova, A.1
Lescoute, A.2
Westhof, E.3
Jayasena, S.D.4
-
21
-
-
0032530198
-
Sequence specificity of the hammerhead ribozyme revisited; The NHH rule
-
DOI 10.1093/nar/26.18.4116
-
Kore AR, Vaish NK, Kutzke U, Eckstein F. 1998. Sequence specificity of the hammerhead ribozyme revisited; the NHH rule. Nucleic Acids Res 26: 4116-4120. (Pubitemid 28418367)
-
(1998)
Nucleic Acids Research
, vol.26
, Issue.18
, pp. 4116-4120
-
-
Kore, A.R.1
Vaish, N.K.2
Kutzke, U.3
Eckstein, F.4
-
22
-
-
14844348294
-
Evolutionarily conserved human targets of adenosine to inosine RNA editing
-
DOI 10.1093/nar/gki239
-
Levanon EY, Hallegger M, Kinar Y, Shemesh R, Djinovic-Carugo K, Rechavi G, Jantsch MF, Eisenberg E. 2005. Evolutionarily conserved human targets of adenosine to inosine RNA editing. Nucleic Acids Res 33: 1162-1168. (Pubitemid 41439909)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.4
, pp. 1162-1168
-
-
Levanon, E.Y.1
Hallegger, M.2
Kinar, Y.3
Shemesh, R.4
Djinovic-Carugo, K.5
Rechavi, G.6
Jantsch, M.F.7
Eisenberg, E.8
-
23
-
-
0031880563
-
Ribozyme rescue of photoreceptor cells in a transgenic rat model of autosomal dominant retinitis pigmentosa
-
DOI 10.1038/nm0898-967
-
Lewin AS, Drenser KA, Hauswirth WW, Nishikawa S, Yasumura D, Flannery JG, LaVail MM. 1998. Ribozyme rescue of photoreceptor cells in a transgenic rat model of autosomal dominant retinitis pigmentosa. Nat Med 4: 967-971. (Pubitemid 28364040)
-
(1998)
Nature Medicine
, vol.4
, Issue.8
, pp. 967-971
-
-
Lewin, A.S.1
Drenser, K.A.2
Hauswirth, W.W.3
Nishikawa, S.4
Yasumura, D.5
Flannery, J.G.6
Lavail, M.M.7
-
24
-
-
66349122954
-
Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing
-
Li JB, Levanon EY, Yoon JK, Aach J, Xie B, Leproust E, Zhang K, Gao Y, Church GM. 2009. Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing. Science 324: 1210-1213.
-
(2009)
Science
, vol.324
, pp. 1210-1213
-
-
Li, J.B.1
Levanon, E.Y.2
Yoon, J.K.3
Aach, J.4
Xie, B.5
Leproust, E.6
Zhang, K.7
Gao, Y.8
Church, G.M.9
-
26
-
-
0033843588
-
Changing genetic information through RNA editing
-
Maas S, Rich A. 2000. Changing genetic information through RNA editing. Bioessays 22: 790-802.
-
(2000)
Bioessays
, vol.22
, pp. 790-802
-
-
Maas, S.1
Rich, A.2
-
28
-
-
77952293063
-
Functions and regulation of RNA editing by ADAR deaminases
-
Nishikura K. 2010. Functions and regulation of RNA editing by ADAR deaminases. Annu Rev Biochem 79: 321-349.
-
(2010)
Annu Rev Biochem
, vol.79
, pp. 321-349
-
-
Nishikura, K.1
-
29
-
-
42749096310
-
Determination of editors at the novel A-to-I editing positions
-
Nishimoto Y, Yamashita T, Hideyama T, Tsuji S, Suzuki N, Kwak S. 2008. Determination of editors at the novel A-to-I editing positions. Neurosci Res 61: 201-206.
-
(2008)
Neurosci Res
, vol.61
, pp. 201-206
-
-
Nishimoto, Y.1
Yamashita, T.2
Hideyama, T.3
Tsuji, S.4
Suzuki, N.5
Kwak, S.6
-
30
-
-
0037492813
-
Fluorescent dye terminator sequencing methods for quantitative determination of replication fitness of human immunodeficiency virus type 1 containing the codon 74 and 184 mutations in reverse transcriptase
-
DOI 10.1128/JCM.41.7.3306-3311.2003
-
Nurpeisov V, Hurwitz SJ, Sharma PL. 2003. Fluorescent dye terminator sequencing methods for quantitative determination of replication fitness of human immunodeficiency virus type 1 containing the codon 74 and 184 mutations in reverse transcriptase. J Clin Microbiol 41: 3306-3311. (Pubitemid 36842337)
-
(2003)
Journal of Clinical Microbiology
, vol.41
, Issue.7
, pp. 3306-3311
-
-
Nurpeisov, V.1
Hurwitz, S.J.2
Sharma, P.L.3
-
31
-
-
0026529593
-
Extended target-site specificity for a hammerhead ribozyme
-
Perriman R, Delves A, Gerlach WL. 1992. Extended target-site specificity for a hammerhead ribozyme. Gene 113: 157-163.
-
(1992)
Gene
, vol.113
, pp. 157-163
-
-
Perriman, R.1
Delves, A.2
Gerlach, W.L.3
-
32
-
-
0023651359
-
A novel form of tissue-specific RNA processing produces apolipoprotein-B48 in intestine
-
Powell LM, Wallis SC, Pease RJ, Edwards YH, Knott TJ, Scott J. 1987. A novel form of tissue-specific RNA processing produces apolipoprotein-B48 in intestine. Cell 50: 831-840.
-
(1987)
Cell
, vol.50
, pp. 831-840
-
-
Powell, L.M.1
Wallis, S.C.2
Pease, R.J.3
Edwards, Y.H.4
Knott, T.J.5
Scott, J.6
-
33
-
-
77953747443
-
Proteome diversification by adenosine to inosine RNA editing
-
Pullirsch D, Jantsch MF. 2010. Proteome diversification by adenosine to inosine RNA editing. RNA Biol 7: 205-212.
-
(2010)
RNA Biol
, vol.7
, pp. 205-212
-
-
Pullirsch, D.1
Jantsch, M.F.2
-
34
-
-
44149094073
-
Specificity of ADAR-mediated RNA editing in newly identified targets
-
DOI 10.1261/rna.923308
-
Riedmann EM, Schopoff S, Hartner JC, Jantsch MF. 2008. Specificity of ADAR-mediated RNA editing in newly identified targets. RNA 14: 1110-1118. (Pubitemid 351717491)
-
(2008)
RNA
, vol.14
, Issue.6
, pp. 1110-1118
-
-
Riedmann, E.M.1
Schopoff, S.2
Hartner, J.C.3
Jantsch, M.F.4
-
35
-
-
0030920066
-
Specific hammerhead ribozyme-mediated cleavage of mutant N-ras mRNA in vitro and ex vivo: Oligoribonucleotides as therapeutic agents
-
DOI 10.1074/jbc.272.22.14304
-
Scherr M, Grez M, Ganser A, Engels JW. 1997. Specific hammerhead ribozyme-mediated cleavage of mutant N-ras mRNA in vitro and ex vivo. Oligoribonucleotides as therapeutic agents. J Biol Chem 272: 14304-14313. (Pubitemid 27232844)
-
(1997)
Journal of Biological Chemistry
, vol.272
, Issue.22
, pp. 14304-14313
-
-
Scherr, M.1
Grez, M.2
Ganser, A.3
Engels, J.W.4
-
36
-
-
0029073091
-
The crystal structure of an all-RNA hammerhead ribozyme: A proposed mechanism for RNA catalytic cleavage
-
Scott WG, Finch JT, Klug A. 1995. The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage. Cell 81: 991-1002.
-
(1995)
Cell
, vol.81
, pp. 991-1002
-
-
Scott, W.G.1
Finch, J.T.2
Klug, A.3
-
37
-
-
0038721692
-
Regulation of ion channel/neurotransmitter receptor function by RNA editing
-
DOI 10.1016/S0959-4388(03)00062-X
-
Seeburg PH, Hartner J. 2003. Regulation of ion channel/neurotransmitter receptor function by RNA editing. Curr Opin Neurobiol 13: 279-283. (Pubitemid 36792239)
-
(2003)
Current Opinion in Neurobiology
, vol.13
, Issue.3
, pp. 279-283
-
-
Seeburg, P.H.1
Hartner, J.2
-
38
-
-
3042693157
-
Pronounced instability of tandem IU base pairs in RNA
-
DOI 10.1093/nar/gkh501
-
Serra MJ, Smolter PE, Westhof E. 2004. Pronounced instability of tandem IU base pairs in RNA. Nucleic Acids Res 32: 1824-1828. (Pubitemid 38832728)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.5
, pp. 1824-1828
-
-
Serra, M.J.1
Smolter, P.E.2
Westhof, E.3
-
39
-
-
0025995296
-
RNA editing in brain controls a determinant of ion flow in glutamate-gated channels
-
Sommer B, Kohler M, Sprengel R, Seeburg PH. 1991. RNA editing in brain controls a determinant of ion flow in glutamate-gated channels. Cell 67: 11-19. (Pubitemid 121001421)
-
(1991)
Cell
, vol.67
, Issue.1
, pp. 11-19
-
-
Sommer, B.1
Kohler, M.2
Sprengel, R.3
Seeburg, P.H.4
-
40
-
-
67651218978
-
Hammerhead ribozymes in therapeutic target discovery and validation
-
Tedeschi L, Lande C, Cecchettini A, Citti L. 2009. Hammerhead ribozymes in therapeutic target discovery and validation. Drug Discov Today 14: 776-783.
-
(2009)
Drug Discov Today
, vol.14
, pp. 776-783
-
-
Tedeschi, L.1
Lande, C.2
Cecchettini, A.3
Citti, L.4
-
41
-
-
0023221419
-
A small catalytic oligoribonucleotide
-
DOI 10.1038/328596a0
-
Uhlenbeck OC. 1987. A small catalytic oligoribonucleotide. Nature 328: 596-600. (Pubitemid 17103959)
-
(1987)
Nature
, vol.328
, Issue.6131
, pp. 596-600
-
-
Uhlenbeck, O.C.1
-
42
-
-
0141457647
-
Regulation of human apolipoprotein B gene expression at multiple levels
-
Wang AB, Liu DP, Liang CC. 2003. Regulation of human apolipoprotein B gene expression at multiple levels. Exp Cell Res 290: 1-12.
-
(2003)
Exp Cell Res
, vol.290
, pp. 1-12
-
-
Wang, A.B.1
Liu, D.P.2
Liang, C.C.3
-
43
-
-
0029041941
-
The effect of base mismatches in the substrate recognition helices of hammerhead ribozymes on binding and catalysis
-
Werner M, Uhlenbeck OC. 1995. The effect of base mismatches in the substrate recognition helices of hammerhead ribozymes on binding and catalysis. Nucleic Acids Res 23: 2092-2096.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 2092-2096
-
-
Werner, M.1
Uhlenbeck, O.C.2
-
44
-
-
46149088211
-
RNA editing of the serotonin 5HT2C receptor and its effects on cell signalling, pharmacology and brain function
-
Werry TD, Loiacono R, Sexton PM, Christopoulos A. 2008. RNA editing of the serotonin 5HT2C receptor and its effects on cell signalling, pharmacology and brain function. Pharmacol Ther 119: 7-23.
-
(2008)
Pharmacol Ther
, vol.119
, pp. 7-23
-
-
Werry, T.D.1
Loiacono, R.2
Sexton, P.M.3
Christopoulos, A.4
-
45
-
-
0028932288
-
Comparative analysis of cleavage rates after systematic permutation of the NUXY consensus target motif for hammerhead ribozymes
-
Zoumadakis M, Tabler M. 1995. Comparative analysis of cleavage rates after systematic permutation of the NUXY consensus target motif for hammerhead ribozymes. Nucleic Acids Res 23: 1192-1196.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 1192-1196
-
-
Zoumadakis, M.1
Tabler, M.2
-
46
-
-
0028652252
-
The influence of imperfectly paired helices I and III on the catalytic activity of hammerhead ribozymes
-
Zoumadakis M, Neubert WJ, Tabler M. 1994. The influence of imperfectly paired helices I and III on the catalytic activity of hammerhead ribozymes. Nucleic Acids Res 22: 5271-5278.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 5271-5278
-
-
Zoumadakis, M.1
Neubert, W.J.2
Tabler, M.3
|