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Volumn 1, Issue SUPPL. 48, 2012, Pages

Synthesis of dumbbell-shaped cyclic RNAs for RNA interference

Author keywords

Cyclic RNA; Dumbbell shaped structure; Ligase; RNA interference; RNA synthesis; Short interfering RNA

Indexed keywords

DOUBLE STRANDED RNA; MESSENGER RNA;

EID: 84863772881     PISSN: 19349270     EISSN: 19349289     Source Type: Journal    
DOI: 10.1002/0471142700.nc1604s48     Document Type: Article
Times cited : (5)

References (25)
  • 1
    • 37049000624 scopus 로고    scopus 로고
    • Dumbbellshaped nanocircular RNAs for RNA interference
    • Abe, N., Abe, H., and Ito, Y. 2007. Dumbbellshaped nanocircular RNAs for RNA interference. J. Am. Chem. Soc. 129:15108-15109.
    • (2007) J. Am. Chem. Soc. , vol.129 , pp. 15108-15109
    • Abe, N.1    Abe, H.2    Ito, Y.3
  • 3
    • 0035905766 scopus 로고    scopus 로고
    • Role for a bidentate ribonuclease in the initiation step of RNA interference
    • Bernstein, E., Caudy, A.A., Hammond, S.M., and Hannon, G.J. 2001. Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature 409:363-366.
    • (2001) Nature , vol.409 , pp. 363-366
    • Bernstein, E.1    Caudy, A.A.2    Hammond, S.M.3    Hannon, G.J.4
  • 4
    • 0029788452 scopus 로고    scopus 로고
    • A small circular TAR RNA decoy specifically inhibits Tat-activated HIV-1 transcription
    • Bohjanen, P.R., Colvin, R.A., Puttaraju, M., Been, M.D., and GarciaBlanco, M.A. 1996. A small circular TAR RNA decoy specifically inhibits Tat-activated HIV-1 transcription. Nucleic Acids Res. 24:3733-3738.
    • (1996) Nucleic Acids Res , vol.24 , pp. 3733-3738
    • Bohjanen, P.R.1    Colvin, R.A.2    Puttaraju, M.3    Been, M.D.4    GarciaBlanco, M.A.5
  • 5
    • 0037134020 scopus 로고    scopus 로고
    • A system for stable expression of short interfering RNAs in mammalian cells
    • Brummelkamp, T.R., Bernards, R., and Agami, R. 2002. A system for stable expression of short interfering RNAs in mammalian cells. Science 296:550-553.
    • (2002) Science , vol.296 , pp. 550-553
    • Brummelkamp, T.R.1    Bernards, R.2    Agami, R.3
  • 6
    • 33644620908 scopus 로고    scopus 로고
    • Chemical modification of siRNAs to improve serum stability without loss of efficacy
    • Choung, S., Kim, Y.J., Kim, S., Park, H.O., and Choi, Y.C. 2006. Chemical modification of siRNAs to improve serum stability without loss of efficacy. Biochem. Biophys. Res. Commun. 342:919-927.
    • (2006) Biochem. Biophys. Res. Commun. , vol.342 , pp. 919-927
    • Choung, S.1    Kim, Y.J.2    Kim, S.3    Park, H.O.4    Choi, Y.C.5
  • 7
    • 0025151453 scopus 로고
    • Circulardichroism studies of an oligodeoxynucleotide containing a hairpin loop made of a hexaethylene glycol chain: Conformation and stability
    • Durand, M., Chevrie, K., Chassignol, M., Thuong, N.T., and Maurizot, J.C. 1990. Circulardichroism studies of an oligodeoxynucleotide containing a hairpin loop made of a hexaethylene glycol chain: Conformation and stability. Nucleic Acids Res. 18:6353-6359.
    • (1990) Nucleic Acids Res , vol.18 , pp. 6353-6359
    • Durand, M.1    Chevrie, K.2    Chassignol, M.3    Thuong, N.T.4    Maurizot, J.C.5
  • 8
    • 0035942736 scopus 로고    scopus 로고
    • Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells
    • Elbashir, S.M., Harborth, J., Lendeckel, W., Yalcin, A., Weber, K., and Tuschl, T. 2001. Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. Nature 411:494-498.
    • (2001) Nature , vol.411 , pp. 494-498
    • Elbashir, S.M.1    Harborth, J.2    Lendeckel, W.3    Yalcin, A.4    Weber, K.5    Tuschl, T.6
  • 10
    • 69549105796 scopus 로고    scopus 로고
    • siRNAs: Their potential as therapeutic agents: Part I Designing of siRNAs
    • Hajeri, P.B. and Singh, S.K. 2009. siRNAs: Their potential as therapeutic agents: Part I. Designing of siRNAs. Drug Discov. Today 14:851-858.
    • (2009) Drug Discov. Today , vol.14 , pp. 851-858
    • Hajeri, P.B.1    Singh, S.K.2
  • 11
    • 11344257391 scopus 로고    scopus 로고
    • RNA interference using boranophosphate siRNAs: Structure-activity relationships
    • Hall, A.H.S., Wan, J., Shaughnessy, E.E., Shaw, B.R., and Alexander, K.A. 2004. RNA interference using boranophosphate siRNAs: Structure-activity relationships. Nucleic Acids Res. 32:5991-6000.
    • (2004) Nucleic Acids Res , vol.32 , pp. 5991-6000
    • Hall, A.H.S.1    Wan, J.2    Shaughnessy, E.E.3    Shaw, B.R.4    Alexander, K.A.5
  • 12
    • 24344500241 scopus 로고    scopus 로고
    • Sequence, chemical, and structural variation of small interfering RNAs and short hairpinRNAs and the effect on mammalian gene silencing
    • Harborth, J., Elbashir, S.M., Vandenburgh, K., Manninga, H., Scaringe, S.A., Weber, K., and Tuschl, T. 2003. Sequence, chemical, and structural variation of small interfering RNAs and short hairpinRNAs and the effect on mammalian gene silencing. Antisense Nucl. Acid Drug Dev. 13:83-105.
    • (2003) Antisense Nucl. Acid Drug Dev. , vol.13 , pp. 83-105
    • Harborth, J.1    Elbashir, S.M.2    Vandenburgh, K.3    Manninga, H.4    Scaringe, S.A.5    Weber, K.6    Tuschl, T.7
  • 13
    • 0021761267 scopus 로고
    • Polymerstimulated ligation: Enhanced ligation of oligoand polynucleotides by T4 RNA ligase in polymer solutions
    • Harrison, B. and Zimmerman, S.B. 1984. Polymerstimulated ligation: Enhanced ligation of oligoand polynucleotides by T4 RNA ligase in polymer solutions. NucleicAcids Res. 12:8235-8251.
    • (1984) NucleicAcids Res , vol.12 , pp. 8235-8251
    • Harrison, B.1    Zimmerman, S.B.2
  • 14
    • 0036790939 scopus 로고    scopus 로고
    • Bacteriophage T4 RNA ligase 2 (gp24 1) exemplifies a family of RNA ligases found in all phylogenetic domains
    • Ho, C.K. and Shuman, S. 2002. Bacteriophage T4 RNA ligase 2 (gp24.1) exemplifies a family of RNA ligases found in all phylogenetic domains. Proc. Natl. Acad. Sci. U.S.A. 99:12709-12714.
    • (2002) Proc. Natl. Acad. Sci. U. S. A. , vol.99 , pp. 12709-12714
    • Ho, C.K.1    Shuman, S.2
  • 15
    • 20444410838 scopus 로고    scopus 로고
    • RNA interference induced by siRNAs modified with 4'-thioribonucleosides in cultured mammalian cells
    • Hoshika, S., Minakawa, N., Kamiya, H., Harashima, H., and Matsuda, A. 2005. RNA interference induced by siRNAs modified with 4'-thioribonucleosides in cultured mammalian cells. FEBS Lett. 579:3115-3118.
    • (2005) FEBS Lett , vol.579 , pp. 3115-3118
    • Hoshika, S.1    Minakawa, N.2    Kamiya, H.3    Harashima, H.4    Matsuda, A.5
  • 16
    • 0027296351 scopus 로고
    • Design and synthesis of RNA miniduplexes via a synthetic linker approach. 2. Generation of covalently closed, doublestranded cyclic HIV-1 TAR RNA analogs with high Tat-binding affinity
    • Ma, M.Y.X., McCallum, K., Climie, S.C., Kuperman, R., Lin, W.C., Sumnersmith, M., and Barnett, R.W. 1993. Design and synthesis of RNA miniduplexes via a synthetic linker approach. 2. Generation of covalently closed, doublestranded cyclic HIV-1 TAR RNA analogs with high Tat-binding affinity. Nucleic Acids Res. 21:2585-2589.
    • (1993) Nucleic Acids Res , vol.21 , pp. 2585-2589
    • Ma, M.Y.X.1    McCallum, K.2    Climie, S.C.3    Kuperman, R.4    Lin, W.C.5    Sumnersmith, M.6    Barnett, R.W.7
  • 17
    • 13644269779 scopus 로고    scopus 로고
    • Optimization of an siRNA-expression system with an improved hairpin and its significant suppressive effects inmammalian cells
    • Miyagishi, M., Sumimoto, H., Miyoshi, H., Kawakami, Y., and Taira, K. 2004. Optimization of an siRNA-expression system with an improved hairpin and its significant suppressive effects inmammalian cells. J. GeneMed. 6:715-723.
    • (2004) J. GeneMed. , vol.6 , pp. 715-723
    • Miyagishi, M.1    Sumimoto, H.2    Miyoshi, H.3    Kawakami, Y.4    Taira, K.5
  • 18
    • 3242889236 scopus 로고    scopus 로고
    • siDirect: Highly effective, target-specific siRNA design software for mammalian RNA interference
    • Naito, Y., Yamada, T., Ui-Tei, K., Morishita, S., and Saigo, K. 2004. siDirect: Highly effective, target-specific siRNA design software for mammalian RNA interference. Nucleic Acids Res. 32:W124-W129.
    • (2004) Nucleic Acids Res , vol.32
    • Naito, Y.1    Yamada, T.2    Ui-Tei, K.3    Morishita, S.4    Saigo, K.5
  • 19
    • 33845755467 scopus 로고    scopus 로고
    • Illuminating the silence: Understanding the structure and function of small RNAs
    • Rana, T.M. 2007. Illuminating the silence: Understanding the structure and function of small RNAs. Nat. Rev. Mol. Cell Biol. 8:23-36.
    • (2007) Nat. Rev. Mol. Cell Biol. , vol.8 , pp. 23-36
    • Rana, T.M.1
  • 21
    • 69549119978 scopus 로고    scopus 로고
    • siRNAs: Their potential as therapeutic agents: Part II. Methods of delivery
    • Singh, S.K. and Hajeri, P.B. 2009. siRNAs: Their potential as therapeutic agents: Part II. Methods of delivery. Drug Discov. Today 14:859-865.
    • (2009) Drug Discov. Today , vol.14 , pp. 859-865
    • Singh, S.K.1    Hajeri, P.B.2
  • 24
    • 52049090811 scopus 로고    scopus 로고
    • Chemically modified siRNA: Tools and applications
    • Watts, J.K., Deleavey, G.F., and Damha, M.J. 2008. Chemically modified siRNA: Tools and applications. Drug Discov. Today 13:842-855.
    • (2008) Drug Discov. Today , vol.13 , pp. 842-855
    • Watts, J.K.1    Deleavey, G.F.2    Damha, M.J.3
  • 25
    • 3242890471 scopus 로고    scopus 로고
    • siRNA Selection Server: An automated siRNA oligonucleotide prediction server
    • Yuan, B.B., Latek, R., Hossbach, M., Tuschl, T., and Lewitter, F. 2004. siRNA Selection Server: An automated siRNA oligonucleotide prediction server. Nucleic Acids Res. 32:W130-W134.
    • (2004) Nucleic Acids Res , vol.32
    • Yuan, B.B.1    Latek, R.2    Hossbach, M.3    Tuschl, T.4    Lewitter, F.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.