메뉴 건너뛰기




Volumn 26, Issue 13, 2012, Pages 1433-1444

MUT-16 promotes formation of perinuclear Mutator foci required for RNA silencing in the C. elegans germline

Author keywords

C. elegans; MUT 16; Mutator; P granule; RNAi; SiRNA

Indexed keywords

MUT 16 PROTEIN; PROTEIN; SMALL INTERFERING RNA; UNCLASSIFIED DRUG;

EID: 84863710544     PISSN: 08909369     EISSN: 15495477     Source Type: Journal    
DOI: 10.1101/gad.193904.112     Document Type: Article
Times cited : (125)

References (63)
  • 1
    • 74249101368 scopus 로고    scopus 로고
    • Cytoplasmic compartmentalization of the fetal piRNA pathway in mice
    • doi: 10.1371/journal.pgen.1000764
    • Aravin AA, van der Heijden GW, Castan ̃eda J, Vagin VV, Hannon GJ, Bortvin A. 2009. Cytoplasmic compartmentalization of the fetal piRNA pathway in mice. PLoS Genet 5: e1000764. doi: 10.1371/journal.pgen.1000764.
    • (2009) PLoS Genet , vol.5
    • Aravin, A.A.1    van der Heijden, G.W.2    Vagin, V.V.3    Hannon, G.J.4    Bortvin, A.5
  • 3
    • 0035905766 scopus 로고    scopus 로고
    • Role for a bidentate ribonuclease in the initiation step of RNA interference
    • Bernstein E, Caudy AA, Hammond SM, Hannon GJ. 2001. Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature 409: 363-366.
    • (2001) Nature , vol.409 , pp. 363-366
    • Bernstein, E.1    Caudy, A.A.2    Hammond, S.M.3    Hannon, G.J.4
  • 4
    • 0016063911 scopus 로고
    • The genetics of Caenorhabditis elegans
    • Brenner S. 1974. The genetics of Caenorhabditis elegans. Genetics 77: 71-94.
    • (1974) Genetics , vol.77 , pp. 71-94
    • Brenner, S.1
  • 5
    • 13944268761 scopus 로고    scopus 로고
    • A member of the polymerase b nucleotidyltransferase superfamily is required for RNA interference in C. elegans
    • Chen C-CG, Simard MJ, Tabara H, Brownell DR, McCollough JA, Mello CC. 2005. A member of the polymerase b nucleotidyltransferase superfamily is required for RNA interference in C. elegans. Curr Biol 15: 378-383.
    • (2005) Curr Biol , vol.15 , pp. 378-383
    • Chen, C.-C.G.1    Simard, M.J.2    Tabara, H.3    Brownell, D.R.4    McCollough, J.A.5    Mello, C.C.6
  • 7
    • 77649254581 scopus 로고    scopus 로고
    • Argonautes ALG-3 and ALG-4 are required for spermatogenesis-specific 26G-RNAs and thermotolerant sperm in Caenorhabditis elegans
    • Conine CC, Batista PJ, Gu W, Claycomb JM, Chaves DA, Shirayama M, Mello CC. 2010. Argonautes ALG-3 and ALG-4 are required for spermatogenesis-specific 26G-RNAs and thermotolerant sperm in Caenorhabditis elegans. Proc Natl Acad Sci 107: 3588-3593.
    • (2010) Proc Natl Acad Sci , vol.107 , pp. 3588-3593
    • Conine, C.C.1    Batista, P.J.2    Gu, W.3    Claycomb, J.M.4    Chaves, D.A.5    Shirayama, M.6    Mello, C.C.7
  • 9
    • 77954385645 scopus 로고    scopus 로고
    • Small RNA-mediated gene silencing pathways in C. elegans
    • Fischer SEJ. 2010. Small RNA-mediated gene silencing pathways in C. elegans. Int J Biochem Cell Biol 42: 1306-1315.
    • (2010) Int J Biochem Cell Biol , vol.42 , pp. 1306-1315
    • Fischer, S.E.J.1
  • 10
    • 0038192415 scopus 로고    scopus 로고
    • Continuous exchange of sequence information between dispersed Tc1 transposons in the Caenorhabditis elegans genome
    • Fischer SEJ, Wienholds E, Plasterk RHA. 2003. Continuous exchange of sequence information between dispersed Tc1 transposons in the Caenorhabditis elegans genome. Genetics 164: 127-134.
    • (2003) Genetics , vol.164 , pp. 127-134
    • Fischer, S.E.J.1    Wienholds, E.2    Plasterk, R.H.A.3
  • 13
    • 53649103818 scopus 로고    scopus 로고
    • Processing bodies and germ granules are distinct RNA granules that interact in embryos
    • Gallo CM, Munro E, Rasoloson D, Merritt C, Seydoux G. 2008. Processing bodies and germ granules are distinct RNA granules that interact in embryos. Dev Biol 323: 76-87.
    • (2008) Dev Biol , vol.323 , pp. 76-87
    • Gallo, C.M.1    Munro, E.2    Rasoloson, D.3    Merritt, C.4    Seydoux, G.5
  • 17
    • 77953961505 scopus 로고    scopus 로고
    • Small regulatory RNAs inhibit RNA polymerase II during the elongation phase of transcription
    • Guang S, Bochner AF, Burkhart KB, Burton N, Pavelec DM, Kennedy S. 2010. Small regulatory RNAs inhibit RNA polymerase II during the elongation phase of transcription. Nature 465: 1097-1101.
    • (2010) Nature , vol.465 , pp. 1097-1101
    • Guang, S.1    Bochner, A.F.2    Burkhart, K.B.3    Burton, N.4    Pavelec, D.M.5    Kennedy, S.6
  • 19
    • 81355125071 scopus 로고    scopus 로고
    • The 39-to-59 exoribonuclease Nibbler shapes the 39 ends of microRNAs bound to Drosophila Argonaute1
    • Han BW, Hung J-H, Weng Z, Zamore PD, Ameres SL. 2011. The 39-to-59 exoribonuclease Nibbler shapes the 39 ends of microRNAs bound to Drosophila Argonaute1. Curr Biol 21: 1878-1887.
    • (2011) Curr Biol , vol.21 , pp. 1878-1887
    • Han, B.W.1    Hung, J.-H.2    Weng, Z.3    Zamore, P.D.4    Ameres, S.L.5
  • 20
    • 0033562792 scopus 로고    scopus 로고
    • Change in the shape of dendritic spines caused by overexpression of drebrin in cultured cortical neurons
    • Hayashi K, Shirao T. 1999. Change in the shape of dendritic spines caused by overexpression of drebrin in cultured cortical neurons. J Neurosci 19: 3918-3925.
    • (1999) J Neurosci , vol.19 , pp. 3918-3925
    • Hayashi, K.1    Shirao, T.2
  • 21
    • 68749102148 scopus 로고    scopus 로고
    • TUT4 in concert with Lin28 suppresses microRNA biogenesis through pre-microRNA uridylation
    • Heo I, Joo C, Kim Y-K, Ha M, Yoon M-J, Cho J, Yeom K-H, Han J, Kim VN. 2009. TUT4 in concert with Lin28 suppresses microRNA biogenesis through pre-microRNA uridylation. Cell 138: 696-708.
    • (2009) Cell , vol.138 , pp. 696-708
    • Heo, I.1    Joo, C.2    Kim, Y.-K.3    Ha, M.4    Yoon, M.-J.5    Cho, J.6    Yeom, K.-H.7    Han, J.8    Kim, V.N.9
  • 22
    • 37549014207 scopus 로고    scopus 로고
    • Argonaute proteins: Key players in RNA silencing
    • Hutvagner G, Simard MJ. 2008. Argonaute proteins: Key players in RNA silencing. Nat Rev Mol Cell Biol 9: 22-32.
    • (2008) Nat Rev Mol Cell Biol , vol.9 , pp. 22-32
    • Hutvagner, G.1    Simard, M.J.2
  • 24
    • 0032483543 scopus 로고    scopus 로고
    • PGL-1, a predicted RNA-binding component of germ granules, is essential for fertility in C. elegans
    • Kawasaki I, Shim YH, Kirchner J, Kaminker J, Wood WB, Strome S. 1998. PGL-1, a predicted RNA-binding component of germ granules, is essential for fertility in C. elegans. Cell 94: 635-645.
    • (1998) Cell , vol.94 , pp. 635-645
    • Kawasaki, I.1    Shim, Y.H.2    Kirchner, J.3    Kaminker, J.4    Wood, W.B.5    Strome, S.6
  • 25
    • 79751485564 scopus 로고    scopus 로고
    • The many faces of RNAi
    • Ketting RF. 2011. The many faces of RNAi. Dev Cell 20: 148-161.
    • (2011) Dev Cell , vol.20 , pp. 148-161
    • Ketting, R.F.1
  • 26
    • 0032739015 scopus 로고    scopus 로고
    • Mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD
    • Ketting RF, Haverkamp TH, van Luenen HG, Plasterk RHA. 1999. Mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD. Cell 99: 133-141.
    • (1999) Cell , vol.99 , pp. 133-141
    • Ketting, R.F.1    Haverkamp, T.H.2    van Luenen, H.G.3    Plasterk, R.H.A.4
  • 27
    • 0035887005 scopus 로고    scopus 로고
    • Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans
    • Ketting RF, Fischer SE, Bernstein E, Sijen T, Hannon GJ, Plasterk RHA. 2001. Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans. Genes Dev 15: 2654-2659.
    • (2001) Genes Dev , vol.15 , pp. 2654-2659
    • Ketting, R.F.1    Fischer, S.E.2    Bernstein, E.3    Sijen, T.4    Hannon, G.J.5    Plasterk, R.H.A.6
  • 30
    • 0033931850 scopus 로고    scopus 로고
    • Combinatorial RNA interference indicates GLH-4 can compensate for GLH-1; these two P granule components are critical for fertility in C. elegans
    • Kuznicki KA, Smith PA, Leung-Chiu WM, Estevez AO, Scott HC, Bennett KL. 2000. Combinatorial RNA interference indicates GLH-4 can compensate for GLH-1; these two P granule components are critical for fertility in C. elegans. Development 127: 2907-2916.
    • (2000) Development , vol.127 , pp. 2907-2916
    • Kuznicki, K.A.1    Smith, P.A.2    Leung-Chiu, W.M.3    Estevez, A.O.4    Scott, H.C.5    Bennett, K.L.6
  • 31
    • 0028222187 scopus 로고
    • Localization of vasa protein to the Drosophila pole plasm is independent of its RNAbinding and helicase activities
    • Liang L, Diehl-Jones W, Lasko P. 1994. Localization of vasa protein to the Drosophila pole plasm is independent of its RNAbinding and helicase activities. Development 120: 1201-1211.
    • (1994) Development , vol.120 , pp. 1201-1211
    • Liang, L.1    Diehl-Jones, W.2    Lasko, P.3
  • 32
    • 34249849029 scopus 로고    scopus 로고
    • Unique germ-line organelle, nuage, functions to repress selfish genetic elements in Drosophila melanogaster
    • Lim AK, Kai T. 2007. Unique germ-line organelle, nuage, functions to repress selfish genetic elements in Drosophila melanogaster. Proc Natl Acad Sci 104: 6714-6719.
    • (2007) Proc Natl Acad Sci , vol.104 , pp. 6714-6719
    • Lim, A.K.1    Kai, T.2
  • 33
    • 68549128834 scopus 로고    scopus 로고
    • piRNAs mediate posttranscriptional retroelement silencing and localization to pi-bodies in the Drosophila germline
    • Lim AK, Tao L, Kai T. 2009. piRNAs mediate posttranscriptional retroelement silencing and localization to pi-bodies in the Drosophila germline. J Cell Biol 186: 333-342.
    • (2009) J Cell Biol , vol.186 , pp. 333-342
    • Lim, A.K.1    Tao, L.2    Kai, T.3
  • 35
    • 79952818830 scopus 로고    scopus 로고
    • EGO-1, a C. elegans RdRP, modulates gene expression via production of mRNA-templated short antisense RNAs
    • Maniar JM, Fire AZ. 2011. EGO-1, a C. elegans RdRP, modulates gene expression via production of mRNA-templated short antisense RNAs. Curr Biol 21: 449-459.
    • (2011) Curr Biol , vol.21 , pp. 449-459
    • Maniar, J.M.1    Fire, A.Z.2
  • 36
    • 0034710897 scopus 로고    scopus 로고
    • A census of glutamine/asparagine-rich regions: Implications for their conserved function and the prediction of novel prions
    • Michelitsch MD, Weissman JS. 2000. A census of glutamine/asparagine-rich regions: Implications for their conserved function and the prediction of novel prions. Proc Natl Acad Sci 97: 11910-11915.
    • (2000) Proc Natl Acad Sci , vol.97 , pp. 11910-11915
    • Michelitsch, M.D.1    Weissman, J.S.2
  • 37
    • 84860562145 scopus 로고    scopus 로고
    • PIWI associated siRNAs and piRNAs specifically require the Caenorhabditis elegans HEN1 ortholog henn-1
    • doi: 10.1371/journal.pgen.1002616
    • Montgomery TA, Rim Y-S, Zhang C, Dowen RH, Phillips CM, Fischer SEJ, Ruvkun G. 2012. PIWI associated siRNAs and piRNAs specifically require the Caenorhabditis elegans HEN1 ortholog henn-1. PLoS Genet 8: e1002616. doi: 10.1371/journal.pgen.1002616.
    • (2012) PLoS Genet , vol.8
    • Montgomery, T.A.1    Rim, Y.-S.2    Zhang, C.3    Dowen, R.H.4    Phillips, C.M.5    Fischer, S.E.J.6    Ruvkun, G.7
  • 38
    • 77957793321 scopus 로고    scopus 로고
    • An in vivo RNAi assay identifies major genetic and cellular requirements for primary piRNA biogenesis in Drosophila
    • Olivieri D, Sykora MM, Sachidanandam R, Mechtler K, Brennecke J. 2010. An in vivo RNAi assay identifies major genetic and cellular requirements for primary piRNA biogenesis in Drosophila. EMBO J 29: 3301-3317.
    • (2010) EMBO J , vol.29 , pp. 3301-3317
    • Olivieri, D.1    Sykora, M.M.2    Sachidanandam, R.3    Mechtler, K.4    Brennecke, J.5
  • 39
    • 33846527241 scopus 로고    scopus 로고
    • Distinct populations of primary and secondary effectors during RNAi in C. elegans
    • Pak J, Fire A. 2007. Distinct populations of primary and secondary effectors during RNAi in C. elegans. Science 315: 241-244.
    • (2007) Science , vol.315 , pp. 241-244
    • Pak, J.1    Fire, A.2
  • 40
    • 70350469293 scopus 로고    scopus 로고
    • Cytological analysis of meiosis in Caenorhabditis elegans
    • Phillips CM, McDonald KL, Dernburg AF. 2009. Cytological analysis of meiosis in Caenorhabditis elegans. Methods Mol Biol 558: 171-195.
    • (2009) Methods Mol Biol , vol.558 , pp. 171-195
    • Phillips, C.M.1    McDonald, K.L.2    Dernburg, A.F.3
  • 41
    • 0034643020 scopus 로고    scopus 로고
    • P granules in the germ cells of Caenorhabditis elegans adults are associated with clusters of nuclear pores and contain RNA
    • Pitt JN, Schisa JA, Priess JR. 2000. P granules in the germ cells of Caenorhabditis elegans adults are associated with clusters of nuclear pores and contain RNA. Dev Biol 219: 315-333.
    • (2000) Dev Biol , vol.219 , pp. 315-333
    • Pitt, J.N.1    Schisa, J.A.2    Priess, J.R.3
  • 42
    • 50249131374 scopus 로고    scopus 로고
    • A role for Q/N-rich aggregation-prone regions in P-body localization
    • Reijns MAM, Alexander RD, Spiller MP, Beggs JD. 2008. A role for Q/N-rich aggregation-prone regions in P-body localization. J Cell Sci 121: 2463-2472.
    • (2008) J Cell Sci , vol.121 , pp. 2463-2472
    • Reijns, M.A.M.1    Alexander, R.D.2    Spiller, M.P.3    Beggs, J.D.4
  • 43
    • 80053460544 scopus 로고    scopus 로고
    • The evolutionarily conserved longevity determinants HCF-1 and SIR-2.1/SIRT1 collaborate to regulate DAF-16/FOXO
    • doi: 10.1371/journal.pgen.1002235
    • Rizki G, Iwata TN, Li J, Riedel CG, Picard CL, Jan M, Murphy CT, Lee SS. 2011. The evolutionarily conserved longevity determinants HCF-1 and SIR-2.1/SIRT1 collaborate to regulate DAF-16/FOXO. PLoS Genet 7: e1002235. doi: 10.1371/journal.pgen.1002235.
    • (2011) PLoS Genet , vol.7
    • Rizki, G.1    Iwata, T.N.2    Li, J.3    Riedel, C.G.4    Picard, C.L.5    Jan, M.6    Murphy, C.T.7    Lee, S.S.8
  • 45
    • 33845436047 scopus 로고    scopus 로고
    • Large-scale sequencing reveals 21URNAs and additional microRNAs and endogenous siRNAs in C. elegans
    • Ruby JG, Jan CH, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP. 2006. Large-scale sequencing reveals 21URNAs and additional microRNAs and endogenous siRNAs in C. elegans. Cell 127: 1193-1207.
    • (2006) Cell , vol.127 , pp. 1193-1207
    • Ruby, J.G.1    Jan, C.H.2    Player, C.3    Axtell, M.J.4    Lee, W.5    Nusbaum, C.6    Ge, H.7    Bartel, D.P.8
  • 46
    • 0035042287 scopus 로고    scopus 로고
    • Analysis of RNA associated with P granules in germ cells of C. elegans adults
    • Schisa JA, Pitt JN, Priess JR. 2001. Analysis of RNA associated with P granules in germ cells of C. elegans adults. Development 128: 1287-1298.
    • (2001) Development , vol.128 , pp. 1287-1298
    • Schisa, J.A.1    Pitt, J.N.2    Priess, J.R.3
  • 47
    • 77951229432 scopus 로고    scopus 로고
    • Perinuclear P granules are the principal sites of mRNA export in adult C. elegans germ cells
    • Sheth U, Pitt J, Dennis S, Priess JR. 2010. Perinuclear P granules are the principal sites of mRNA export in adult C. elegans germ cells. Development 137: 1305-1314.
    • (2010) Development , vol.137 , pp. 1305-1314
    • Sheth, U.1    Pitt, J.2    Dennis, S.3    Priess, J.R.4
  • 48
    • 33846524902 scopus 로고    scopus 로고
    • Secondary siRNAs result from unprimed RNA synthesis and form a distinct class
    • Sijen T, Steiner FA, Thijssen KL, Plasterk RHA. 2007. Secondary siRNAs result from unprimed RNA synthesis and form a distinct class. Science 315: 244-247.
    • (2007) Science , vol.315 , pp. 244-247
    • Sijen, T.1    Steiner, F.A.2    Thijssen, K.L.3    Plasterk, R.H.A.4
  • 50
    • 0021064382 scopus 로고
    • Generation of asymmetry and segregation of germ-line granules in early C. elegans embryos
    • Strome S, Wood WB. 1983. Generation of asymmetry and segregation of germ-line granules in early C. elegans embryos. Cell 35: 15-25.
    • (1983) Cell , vol.35 , pp. 15-25
    • Strome, S.1    Wood, W.B.2
  • 53
    • 0037169034 scopus 로고    scopus 로고
    • RNA helicase MUT-14-dependent gene silencing triggered in C. elegans by short antisense RNAs
    • Tijsterman M, Ketting RF, Okihara KL, Sijen T, Plasterk RHA. 2002. RNA helicase MUT-14-dependent gene silencing triggered in C. elegans by short antisense RNAs. Science 295: 694-697.
    • (2002) Science , vol.295 , pp. 694-697
    • Tijsterman, M.1    Ketting, R.F.2    Okihara, K.L.3    Sijen, T.4    Plasterk, R.H.A.5
  • 55
    • 0034191987 scopus 로고    scopus 로고
    • Expression and intracellular localization of mouse Vasa-homologue protein during germ cell development
    • Toyooka Y, Tsunekawa N, Takahashi Y, Matsui Y, Satoh M, Noce T. 2000. Expression and intracellular localization of mouse Vasa-homologue protein during germ cell development. Mech Dev 93: 139-149.
    • (2000) Mech Dev , vol.93 , pp. 139-149
    • Toyooka, Y.1    Tsunekawa, N.2    Takahashi, Y.3    Matsui, Y.4    Satoh, M.5    Noce, T.6
  • 59
    • 45449118682 scopus 로고    scopus 로고
    • A C. elegans Piwi, PRG-1, regulates 21U-RNAs during spermatogenesis
    • Wang G, Reinke V. 2008. A C. elegans Piwi, PRG-1, regulates 21U-RNAs during spermatogenesis. Curr Biol 18: 861-867.
    • (2008) Curr Biol , vol.18 , pp. 861-867
    • Wang, G.1    Reinke, V.2
  • 60
    • 0028097921 scopus 로고
    • The structure and function of prolinerich regions in proteins
    • Williamson MP. 1994. The structure and function of prolinerich regions in proteins. Biochem J 297: 249-260.
    • (1994) Biochem J , vol.297 , pp. 249-260
    • Williamson, M.P.1
  • 63
    • 55949117057 scopus 로고    scopus 로고
    • Comparative analysis of argonaute-dependent small RNA pathways in Drosophila
    • Zhou R, Hotta I, Denli AM, Hong P, Perrimon N, Hannon GJ. 2008. Comparative analysis of argonaute-dependent small RNA pathways in Drosophila. Mol Cell 32: 592-599.
    • (2008) Mol Cell , vol.32 , pp. 592-599
    • Zhou, R.1    Hotta, I.2    Denli, A.M.3    Hong, P.4    Perrimon, N.5    Hannon, G.J.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.