-
1
-
-
0033153175
-
Novel approaches for discovering industrial enzymes
-
Marrs B, Delagrave S, Murphy D, (1999) Novel approaches for discovering industrial enzymes. Curr Opin Microbiol 2: 241-245.
-
(1999)
Curr Opin Microbiol
, vol.2
, pp. 241-245
-
-
Marrs, B.1
Delagrave, S.2
Murphy, D.3
-
2
-
-
0042432086
-
Directed evolution of industrial enzymes: an update
-
Cherry JR, Fidantsef AL, (2003) Directed evolution of industrial enzymes: an update. Curr Opin Biotechnol 14: 438-443.
-
(2003)
Curr Opin Biotechnol
, vol.14
, pp. 438-443
-
-
Cherry, J.R.1
Fidantsef, A.L.2
-
4
-
-
4544244867
-
Rational engineering of enzyme stability
-
Eijsink V, Bjork A, Gaseidnes S, Sirevag R, Synstad B, et al. (2004) Rational engineering of enzyme stability. J Biotechnol 113: 105-120.
-
(2004)
J Biotechnol
, vol.113
, pp. 105-120
-
-
Eijsink, V.1
Bjork, A.2
Gaseidnes, S.3
Sirevag, R.4
Synstad, B.5
-
6
-
-
0034604105
-
A surprising simplicity to protein folding
-
Baker D, (2000) A surprising simplicity to protein folding. Nature 405: 39-42.
-
(2000)
Nature
, vol.405
, pp. 39-42
-
-
Baker, D.1
-
7
-
-
0034383950
-
Protein folding: progress made and promises ahead
-
Radford SE, (2000) Protein folding: progress made and promises ahead. Trends Biochem Sci 25: 611-618.
-
(2000)
Trends Biochem Sci
, vol.25
, pp. 611-618
-
-
Radford, S.E.1
-
8
-
-
0037221599
-
Is there a unifying mechanism for protein folding?
-
Daggett V, Fersht AR, (2003) Is there a unifying mechanism for protein folding? Trends Biochem Sci 28: 18-25.
-
(2003)
Trends Biochem Sci
, vol.28
, pp. 18-25
-
-
Daggett, V.1
Fersht, A.R.2
-
9
-
-
4744372269
-
Effects of a Novel Disulfide Bond and Engineered Electrostatic Interactions on the Thermostability of Azurin
-
Tigerstrom A, Schwarz F, Karlsson G, Okvist M, Älvarez-Rua C, et al. (2004) Effects of a Novel Disulfide Bond and Engineered Electrostatic Interactions on the Thermostability of Azurin. Biochemistry 43: 12563-12574.
-
(2004)
Biochemistry
, vol.43
, pp. 12563-12574
-
-
Tigerstrom, A.1
Schwarz, F.2
Karlsson, G.3
Okvist, M.4
Älvarez-Rua, C.5
-
10
-
-
0036172116
-
Hydrophobic core packing in the SH3 domain folding transition state
-
Northey JGB, Di Nardo AA, Davidson AR, (2002) Hydrophobic core packing in the SH3 domain folding transition state. Nat Struct Biol 9: 126-130.
-
(2002)
Nat Struct Biol
, vol.9
, pp. 126-130
-
-
Northey, J.G.B.1
Di Nardo, A.A.2
Davidson, A.R.3
-
11
-
-
0027382315
-
Structure of the Hydrophobic Core in the Transition State for Folding of Chymotrypsin Inhibitor 2: A Critical Test of the Protein Engineering Method of Analysis
-
Jackson SE, elMasry N, Fersht AR, (1993) Structure of the Hydrophobic Core in the Transition State for Folding of Chymotrypsin Inhibitor 2: A Critical Test of the Protein Engineering Method of Analysis. Biochemistry 32: 11270-11278.
-
(1993)
Biochemistry
, vol.32
, pp. 11270-11278
-
-
Jackson, S.E.1
elMasry, N.2
Fersht, A.R.3
-
12
-
-
1042298814
-
Mechanism of Thermostabilization in a Designed Cold Shock Protein with Optimized Surface Electrostatic Interactions
-
Makhatadze GI, Loladze VV, Gribenko AV, Lopez MM, (2004) Mechanism of Thermostabilization in a Designed Cold Shock Protein with Optimized Surface Electrostatic Interactions. J Mol Biol 336: 929-942.
-
(2004)
J Mol Biol
, vol.336
, pp. 929-942
-
-
Makhatadze, G.I.1
Loladze, V.V.2
Gribenko, A.V.3
Lopez, M.M.4
-
13
-
-
0034017055
-
Factors enhancing protein thermostability
-
Kumar S, Tsai C-J, Nussinov R, (2000) Factors enhancing protein thermostability. Protein Eng 13: 179-191.
-
(2000)
Protein Eng
, vol.13
, pp. 179-191
-
-
Kumar, S.1
Tsai, C.-J.2
Nussinov, R.3
-
14
-
-
33646790531
-
Comparative analysis of protein thermostability: Differences in amino acid content and substitution at the surfaces and in the core regions of thermophilic and mesophilic proteins
-
Yokota K, Satou K, Ohki S-Y, (2006) Comparative analysis of protein thermostability: Differences in amino acid content and substitution at the surfaces and in the core regions of thermophilic and mesophilic proteins. Science and Technology of Advanced Materials 7: 255-262.
-
(2006)
Science and Technology of Advanced Materials
, vol.7
, pp. 255-262
-
-
Yokota, K.1
Satou, K.2
Ohki, S.-Y.3
-
15
-
-
33644697915
-
Protein Stability and Surface Electrostatics: A Charged Relationship
-
Strickler SS, Gribenko AV, Gribenko AV, Keiffer TR, Tomlinson J, et al. (2006) Protein Stability and Surface Electrostatics: A Charged Relationship. Biochemistry 45: 2761-2766.
-
(2006)
Biochemistry
, vol.45
, pp. 2761-2766
-
-
Strickler, S.S.1
Gribenko, A.V.2
Gribenko, A.V.3
Keiffer, T.R.4
Tomlinson, J.5
-
17
-
-
0028268676
-
A structural role for arginine in proteins: Multiple hydrogen bonds to backbone carbonyl oxygens
-
C.l. Borders J, Broadwater JA, Bekeny PA, Salmon JE, Lee AS, et al. (1994) A structural role for arginine in proteins: Multiple hydrogen bonds to backbone carbonyl oxygens. Protein Sci 3: 541-548.
-
(1994)
Protein Sci
, vol.3
, pp. 541-548
-
-
C.l. Borders, J.1
Broadwater, J.A.2
Bekeny, P.A.3
Salmon, J.E.4
Lee, A.S.5
-
18
-
-
79551477576
-
Salt bridges: Geometrically specific, designable interactions
-
Donald JE, Kulp DW, DeGrado WF, (2011) Salt bridges: Geometrically specific, designable interactions. Proteins: Struct Funct Bioinform 79: 898-915.
-
(2011)
Proteins: Struct Funct Bioinform
, vol.79
, pp. 898-915
-
-
Donald, J.E.1
Kulp, D.W.2
DeGrado, W.F.3
-
19
-
-
0029588555
-
Complex Salt Bridges in Proteins: Statistical Analysis of Structure and Function
-
Musafia B, Buchner V, Arad D, (1995) Complex Salt Bridges in Proteins: Statistical Analysis of Structure and Function. J Mol Biol 254: 761-770.
-
(1995)
J Mol Biol
, vol.254
, pp. 761-770
-
-
Musafia, B.1
Buchner, V.2
Arad, D.3
-
20
-
-
79956216386
-
Increased number of Arginine-based salt bridges contributes to the thermotolerance of thermotolerant acetic acid bacteria, Acetobacter tropicalis SKU1100
-
Matsutani M, Hirakawa H, Nishikura M, Soemphol W, Ali IAI, et al. (2011) Increased number of Arginine-based salt bridges contributes to the thermotolerance of thermotolerant acetic acid bacteria, Acetobacter tropicalis SKU1100. Biochem Biophys Res Commun 409: 120-124.
-
(2011)
Biochem Biophys Res Commun
, vol.409
, pp. 120-124
-
-
Matsutani, M.1
Hirakawa, H.2
Nishikura, M.3
Soemphol, W.4
Ali, I.A.I.5
-
21
-
-
0033550299
-
Salt Bridge Stability in Monomeric Proteins
-
Kumar S, Nussinov R, (1999) Salt Bridge Stability in Monomeric Proteins. J Mol Biol 293: 1241-1255.
-
(1999)
J Mol Biol
, vol.293
, pp. 1241-1255
-
-
Kumar, S.1
Nussinov, R.2
-
22
-
-
4544246089
-
Mutation of exposed hydrophobic amino acids to arginine to increase protein stability
-
Strub C, Alies C, Lougarre A, Ladurantie C, Czaplicki J, et al. (2004) Mutation of exposed hydrophobic amino acids to arginine to increase protein stability. BMC Biochem 5: 9.
-
(2004)
BMC Biochem
, vol.5
, pp. 9
-
-
Strub, C.1
Alies, C.2
Lougarre, A.3
Ladurantie, C.4
Czaplicki, J.5
-
23
-
-
79959612799
-
Stabilizing Salt-Bridge Enhances Protein Thermostability by Reducing the Heat Capacity Change of Unfolding
-
Chan C-H, Yu T-H, Wong K-B, (2011) Stabilizing Salt-Bridge Enhances Protein Thermostability by Reducing the Heat Capacity Change of Unfolding. PLoS One 6: e21624.
-
(2011)
PLoS One
, vol.6
-
-
Chan, C.-H.1
Yu, T.-H.2
Wong, K.-B.3
-
24
-
-
0036217687
-
Engineering of multiple arginines into the Ser/Thr surface of Trichoderma ressei endo-1,4-β-xylanase II increases the thermotolerance and shifts the pH optimum towards alkaline pH
-
Turunen O, Vuorio M, Fenel F, Leisola M, (2002) Engineering of multiple arginines into the Ser/Thr surface of Trichoderma ressei endo-1,4-β-xylanase II increases the thermotolerance and shifts the pH optimum towards alkaline pH. Protein Eng 15: 141-145.
-
(2002)
Protein Eng
, vol.15
, pp. 141-145
-
-
Turunen, O.1
Vuorio, M.2
Fenel, F.3
Leisola, M.4
-
25
-
-
0031006611
-
Chromophore Formation in Green Fluorescent Protein
-
Reid BG, Flynn GC, (1997) Chromophore Formation in Green Fluorescent Protein. Biochemistry 36: 6786-6791.
-
(1997)
Biochemistry
, vol.36
, pp. 6786-6791
-
-
Reid, B.G.1
Flynn, G.C.2
-
26
-
-
0033015460
-
Rapid protein-folding assay using green fluorescent protein
-
Waldo GS, Standish BM, Berendzen J, Terwilliger TC, (1999) Rapid protein-folding assay using green fluorescent protein. Nat Biotech 17: 691-695.
-
(1999)
Nat Biotech
, vol.17
, pp. 691-695
-
-
Waldo, G.S.1
Standish, B.M.2
Berendzen, J.3
Terwilliger, T.C.4
-
27
-
-
34347346201
-
Protein Immobilization Strategies for Protein Biochips
-
Rusmini F, Zhong Z, Feijen J, (2007) Protein Immobilization Strategies for Protein Biochips. Biomacromolecules 8: 1775-1789.
-
(2007)
Biomacromolecules
, vol.8
, pp. 1775-1789
-
-
Rusmini, F.1
Zhong, Z.2
Feijen, J.3
-
28
-
-
67749127839
-
Development of GFP-based biosensors possessing the binding properties of antibodies
-
Pavoor TV, Cho YK, Shusta EV, (2009) Development of GFP-based biosensors possessing the binding properties of antibodies. Proc Natl Acad Sci U S A 106: 11895-11900.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 11895-11900
-
-
Pavoor, T.V.1
Cho, Y.K.2
Shusta, E.V.3
-
29
-
-
0029780351
-
The molecular structure of green fluorescent protein
-
Yang F, Moss LG, Phillips GN, (1996) The molecular structure of green fluorescent protein. Nat Biotech 14: 1246-1251.
-
(1996)
Nat Biotech
, vol.14
, pp. 1246-1251
-
-
Yang, F.1
Moss, L.G.2
Phillips, G.N.3
-
30
-
-
0029973636
-
FACS-optimized mutants of the green fluorescent protein (GFP)
-
P. Cormack B, H.Valdivia R, Falkow S, (1996) FACS-optimized mutants of the green fluorescent protein (GFP). Gene 173: 33-38.
-
(1996)
Gene
, vol.173
, pp. 33-38
-
-
Cormack, B.P.1
Valdivia, R.H.2
Falkow, S.3
-
31
-
-
70349347502
-
The extremely slow-exchanging core and acid-denatured state of green fluorescent protein
-
Huang J-R, Hsu S-TD, Christodoulou J, Jackson SE, (2008) The extremely slow-exchanging core and acid-denatured state of green fluorescent protein. HFSP J 2: 378-387.
-
(2008)
HFSP J
, vol.2
, pp. 378-387
-
-
Huang, J.-R.1
Hsu, S.-T.D.2
Christodoulou, J.3
Jackson, S.E.4
-
32
-
-
84863615479
-
-
Nelson, D., and Cox, M. Biochemistry and Molecular Biology Education
-
Boyle J, (2005) Lehninger principles of biochemistry (4th ed.): Nelson, D., and Cox, M. Biochemistry and Molecular Biology Education 33: 74-75.
-
(2005)
Lehninger principles of biochemistry (4th ed.)
, vol.33
, pp. 74-75
-
-
Boyle, J.1
-
33
-
-
0028304962
-
Satisfying Hydrogen-Bonding Potential In Proteins
-
McDonald IK, Thornton JM, (1994) Satisfying Hydrogen-Bonding Potential In Proteins. J Mol Biol 238: 777-793.
-
(1994)
J Mol Biol
, vol.238
, pp. 777-793
-
-
McDonald, I.K.1
Thornton, J.M.2
-
34
-
-
0034633994
-
Contribution of Salt Bridges near the Surface of a Protein to the Conformational Stability
-
Takano K, Tsuchimori K, Yamagata Y, Yutani K, (2000) Contribution of Salt Bridges near the Surface of a Protein to the Conformational Stability. Biochemistry 39: 12375-12381.
-
(2000)
Biochemistry
, vol.39
, pp. 12375-12381
-
-
Takano, K.1
Tsuchimori, K.2
Yamagata, Y.3
Yutani, K.4
-
35
-
-
0037137253
-
Protein Hydration, Thermodynamic Binding, and Preferential Hydration
-
Timasheff SN, (2002) Protein Hydration, Thermodynamic Binding, and Preferential Hydration. Biochemistry 41: 13473-13482.
-
(2002)
Biochemistry
, vol.41
, pp. 13473-13482
-
-
Timasheff, S.N.1
-
36
-
-
33644759714
-
Peracetylated Bovine Carbonic Anhydrase (BCA-Ac18) Is Kinetically More Stable than Native BCA to Sodium Dodecyl Sulfate
-
Gitlin I, Gudiksen KL, Whitesides GM, (2006) Peracetylated Bovine Carbonic Anhydrase (BCA-Ac18) Is Kinetically More Stable than Native BCA to Sodium Dodecyl Sulfate. J Phys Chem B 110: 2372-2377.
-
(2006)
J Phys Chem B
, vol.110
, pp. 2372-2377
-
-
Gitlin, I.1
Gudiksen, K.L.2
Whitesides, G.M.3
-
37
-
-
0032871869
-
A comparative study of the unfolding of the endoglucanase Cel45 from Humicola insolens in denaturant and surfactant
-
Otzen DE, Christiansen L, Schülein M, (1999) A comparative study of the unfolding of the endoglucanase Cel45 from Humicola insolens in denaturant and surfactant. Protein Sci 8: 1878-1887.
-
(1999)
Protein Sci
, vol.8
, pp. 1878-1887
-
-
Otzen, D.E.1
Christiansen, L.2
Schülein, M.3
-
38
-
-
73649087584
-
On the mechanism of SDS-induced protein denaturation
-
Bhuyan AK, (2010) On the mechanism of SDS-induced protein denaturation. Biopolymers 93: 186-199.
-
(2010)
Biopolymers
, vol.93
, pp. 186-199
-
-
Bhuyan, A.K.1
-
39
-
-
34247854995
-
Unfolding of β-Sheet Proteins in SDS
-
Nielsen M, Andersen K, Westh P, Otzen D, (2007) Unfolding of β-Sheet Proteins in SDS. Biophys J 92: 3674-3685.
-
(2007)
Biophys J
, vol.92
, pp. 3674-3685
-
-
Nielsen, M.1
Andersen, K.2
Westh, P.3
Otzen, D.4
-
40
-
-
36849036714
-
Identifying the subproteome of kinetically stable proteins via diagonal 2D SDS/PAGE
-
Xia K, Manning M, Hesham H, Lin Q, Bystroff C, et al. (2007) Identifying the subproteome of kinetically stable proteins via diagonal 2D SDS/PAGE. Proc Natl Acad Sci U S A 104: 17329-17334.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 17329-17334
-
-
Xia, K.1
Manning, M.2
Hesham, H.3
Lin, Q.4
Bystroff, C.5
-
41
-
-
46249092554
-
GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation
-
Hess B, Kutzner C, van der Spoel D, Lindahl E, (2008) GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation. J Chem Theory Comput 4: 435-447.
-
(2008)
J Chem Theory Comput
, vol.4
, pp. 435-447
-
-
Hess, B.1
Kutzner, C.2
van der Spoel, D.3
Lindahl, E.4
|