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Volumn 7, Issue 6, 2012, Pages

Coordinated miRNA/mRNA expression profiles for understanding breed-specific metabolic characters of liver between Erhualian and large white pigs

Author keywords

[No Author keywords available]

Indexed keywords

CHOLESTEROL; HIGH DENSITY LIPOPROTEIN CHOLESTEROL; HYDROCORTISONE; INSULIN; LEPTIN; LOW DENSITY LIPOPROTEIN CHOLESTEROL; MESSENGER RNA; MICRORNA;

EID: 84862173714     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0038716     Document Type: Article
Times cited : (21)

References (43)
  • 1
    • 4644309196 scopus 로고    scopus 로고
    • The functions of animal microRNAs
    • Ambros V, (2004) The functions of animal microRNAs. Nature 431: 350-355.
    • (2004) Nature , vol.431 , pp. 350-355
    • Ambros, V.1
  • 2
    • 78049468823 scopus 로고    scopus 로고
    • MicroRNAs control intestinal epithelial differentiation, architecture, and barrier function
    • McKenna LB, Schug J, Vourekas A, McKenna JB, Bramswig NC, et al. (2010) MicroRNAs control intestinal epithelial differentiation, architecture, and barrier function. Gastroenterology 139: 1654-1664, 1664 e1651.
    • (2010) Gastroenterology , vol.139
    • McKenna, L.B.1    Schug, J.2    Vourekas, A.3    McKenna, J.B.4    Bramswig, N.C.5
  • 3
    • 74249095917 scopus 로고    scopus 로고
    • miR-10 in development and cancer
    • Lund AH, (2010) miR-10 in development and cancer. Cell Death Differ 17: 209-214.
    • (2010) Cell Death Differ , vol.17 , pp. 209-214
    • Lund, A.H.1
  • 4
    • 33845242919 scopus 로고    scopus 로고
    • MicroRNAs: regulators of gene expression and cell differentiation
    • Shivdasani RA, (2006) MicroRNAs: regulators of gene expression and cell differentiation. Blood 108: 3646-3653.
    • (2006) Blood , vol.108 , pp. 3646-3653
    • Shivdasani, R.A.1
  • 6
    • 79551564464 scopus 로고    scopus 로고
    • Discovery of porcine microRNAs in multiple tissues by a Solexa deep sequencing approach
    • Xie SS, Li XY, Liu T, Cao JH, Zhong Q, et al. (2011) Discovery of porcine microRNAs in multiple tissues by a Solexa deep sequencing approach. PLoS One 6: e16235.
    • (2011) PLoS One , vol.6
    • Xie, S.S.1    Li, X.Y.2    Liu, T.3    Cao, J.H.4    Zhong, Q.5
  • 7
    • 77955388999 scopus 로고    scopus 로고
    • MicroRNAome of porcine pre- and postnatal development
    • Li M, Xia Y, Gu Y, Zhang K, Lang Q, et al. (2010) MicroRNAome of porcine pre- and postnatal development. PLoS One 5: e11541.
    • (2010) PLoS One , vol.5
    • Li, M.1    Xia, Y.2    Gu, Y.3    Zhang, K.4    Lang, Q.5
  • 8
    • 79957855872 scopus 로고    scopus 로고
    • A systematic analysis of the skeletal muscle miRNA transcriptome of chicken varieties with divergent skeletal muscle growth identifies novel miRNAs and differentially expressed miRNAs
    • Li T, Wu R, Zhang Y, Zhu D, (2011) A systematic analysis of the skeletal muscle miRNA transcriptome of chicken varieties with divergent skeletal muscle growth identifies novel miRNAs and differentially expressed miRNAs. BMC Genomics 12: 186.
    • (2011) BMC Genomics , vol.12 , pp. 186
    • Li, T.1    Wu, R.2    Zhang, Y.3    Zhu, D.4
  • 9
    • 37349067823 scopus 로고    scopus 로고
    • A subset of skin-expressed microRNAs with possible roles in goat and sheep hair growth based on expression profiling of mammalian microRNAs
    • Wenguang Z, Jianghong W, Jinquan L, Yashizawa M, (2007) A subset of skin-expressed microRNAs with possible roles in goat and sheep hair growth based on expression profiling of mammalian microRNAs. OMICS 11: 385-396.
    • (2007) OMICS , vol.11 , pp. 385-396
    • Wenguang, Z.1    Jianghong, W.2    Jinquan, L.3    Yashizawa, M.4
  • 10
    • 29444457540 scopus 로고    scopus 로고
    • Developments in global pig production
    • Hartog Ld, (2004) Developments in global pig production. Adv Pork Prod 15: 17-24.
    • (2004) Adv Pork Prod , vol.15 , pp. 17-24
    • Hartog, L.D.1
  • 11
    • 38949085542 scopus 로고    scopus 로고
    • The development of porcine models of obesity and the metabolic syndrome
    • Spurlock ME, (2008) The development of porcine models of obesity and the metabolic syndrome. Journal of Nutrition, The 138: 397.
    • (2008) Journal of Nutrition, The , vol.138 , pp. 397
    • Spurlock, M.E.1
  • 12
    • 79960044269 scopus 로고    scopus 로고
    • Animal models for the atherosclerosis research: a review
    • Xiangdong L, Yuanwu L, Hua Z, Liming R, Qiuyan L, et al. (2011) Animal models for the atherosclerosis research: a review. Protein Cell 2: 189-201.
    • (2011) Protein Cell , vol.2 , pp. 189-201
    • Xiangdong, L.1    Yuanwu, L.2    Hua, Z.3    Liming, R.4    Qiuyan, L.5
  • 13
    • 79952349207 scopus 로고    scopus 로고
    • Microminipig, a non-rodent experimental animal optimized for life science research:novel atherosclerosis model induced by high fat and cholesterol diet
    • Kawaguchi H, Miyoshi N, Miura N, Fujiki M, Horiuchi M, et al. (2011) Microminipig, a non-rodent experimental animal optimized for life science research:novel atherosclerosis model induced by high fat and cholesterol diet. J Pharmacol Sci 115: 115-121.
    • (2011) J Pharmacol Sci , vol.115 , pp. 115-121
    • Kawaguchi, H.1    Miyoshi, N.2    Miura, N.3    Fujiki, M.4    Horiuchi, M.5
  • 14
    • 58649100240 scopus 로고    scopus 로고
    • The Pig Genome Database (PiGenome): an integrated database for pig genome research
    • Lim D, (2009) The Pig Genome Database (PiGenome): an integrated database for pig genome research. Mammalian Genome 20: 60.
    • (2009) Mammalian Genome , vol.20 , pp. 60
    • Lim, D.1
  • 15
    • 77951628592 scopus 로고    scopus 로고
    • MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing
    • Nielsen M, Hansen JH, Hedegaard J, Nielsen RO, Panitz F, et al. (2010) MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing. Anim Genet 41: 159-168.
    • (2010) Anim Genet , vol.41 , pp. 159-168
    • Nielsen, M.1    Hansen, J.H.2    Hedegaard, J.3    Nielsen, R.O.4    Panitz, F.5
  • 16
    • 79953727874 scopus 로고    scopus 로고
    • MicroRNA identity and abundance in developing swine adipose tissue as determined by solexa sequencing
    • Li G, Li Y, Li X, Ning X, Li M, et al. (2011) MicroRNA identity and abundance in developing swine adipose tissue as determined by solexa sequencing. J Cell Biochem 112: 1318-1328.
    • (2011) J Cell Biochem , vol.112 , pp. 1318-1328
    • Li, G.1    Li, Y.2    Li, X.3    Ning, X.4    Li, M.5
  • 18
    • 79959909952 scopus 로고    scopus 로고
    • Expression of the insulin-like growth factor system in skeletal muscle during embryonic and postnatal development in the first filial generation pigs from Erhualian and Yorkshire reciprocal crosses
    • Wang L, Zhang G, Lin F, Jiang B, Dong F, et al. (2011) Expression of the insulin-like growth factor system in skeletal muscle during embryonic and postnatal development in the first filial generation pigs from Erhualian and Yorkshire reciprocal crosses. Gen Comp Endocrinol 173: 56-62.
    • (2011) Gen Comp Endocrinol , vol.173 , pp. 56-62
    • Wang, L.1    Zhang, G.2    Lin, F.3    Jiang, B.4    Dong, F.5
  • 19
    • 44249084156 scopus 로고    scopus 로고
    • Characterization of adrenal ACTH signaling pathway and steroidogenic enzymes in Erhualian and Pietrain pigs with different plasma cortisol levels
    • Li LA, Xia D, Wei S, Hartung J, Zhao RQ, (2008) Characterization of adrenal ACTH signaling pathway and steroidogenic enzymes in Erhualian and Pietrain pigs with different plasma cortisol levels. Steroids 73: 806-814.
    • (2008) Steroids , vol.73 , pp. 806-814
    • Li, L.A.1    Xia, D.2    Wei, S.3    Hartung, J.4    Zhao, R.Q.5
  • 20
    • 79951555783 scopus 로고    scopus 로고
    • Microarray profiling for differential gene expression in PMSG-hCG stimulated preovulatory ovarian follicles of Chinese Taihu and Large White sows
    • Sun X, Mei S, Tao H, Wang G, Su L, et al. (2011) Microarray profiling for differential gene expression in PMSG-hCG stimulated preovulatory ovarian follicles of Chinese Taihu and Large White sows. BMC Genomics 12: 111.
    • (2011) BMC Genomics , vol.12 , pp. 111
    • Sun, X.1    Mei, S.2    Tao, H.3    Wang, G.4    Su, L.5
  • 21
    • 68849112474 scopus 로고    scopus 로고
    • Detection of differentially expressed genes between Erhualian and Large White placentas on day 75 and 90 of gestation
    • Zhou QY, Fang MD, Huang TH, Li CC, Yu M, et al. (2009) Detection of differentially expressed genes between Erhualian and Large White placentas on day 75 and 90 of gestation. BMC Genomics 10: 337.
    • (2009) BMC Genomics , vol.10 , pp. 337
    • Zhou, Q.Y.1    Fang, M.D.2    Huang, T.H.3    Li, C.C.4    Yu, M.5
  • 22
    • 67349179168 scopus 로고    scopus 로고
    • The up-regulation of microRNA-335 is associated with lipid metabolism in liver and white adipose tissue of genetically obese mice
    • Nakanishi N, (2009) The up-regulation of microRNA-335 is associated with lipid metabolism in liver and white adipose tissue of genetically obese mice. Biochemical and Biophysical Research Communications 385: 492.
    • (2009) Biochemical and Biophysical Research Communications , vol.385 , pp. 492
    • Nakanishi, N.1
  • 23
    • 33645075443 scopus 로고    scopus 로고
    • miR-122 regulation of lipid metabolism revealed by in vivo antisense targeting
    • Esau C, Davis S, Murray SF, Yu XX, Pandey SK, et al. (2006) miR-122 regulation of lipid metabolism revealed by in vivo antisense targeting. Cell Metab 3: 87-98.
    • (2006) Cell Metab , vol.3 , pp. 87-98
    • Esau, C.1    Davis, S.2    Murray, S.F.3    Yu, X.X.4    Pandey, S.K.5
  • 24
    • 79957802938 scopus 로고    scopus 로고
    • MicroRNAs and their predicted target messenger RNAs are deregulated by exposure to a carcinogenic dose of comfrey in rat liver
    • Li Z, Fuscoe JC, Chen T, (2011) MicroRNAs and their predicted target messenger RNAs are deregulated by exposure to a carcinogenic dose of comfrey in rat liver. Environ Mol Mutagen 52: 469-478.
    • (2011) Environ Mol Mutagen , vol.52 , pp. 469-478
    • Li, Z.1    Fuscoe, J.C.2    Chen, T.3
  • 25
    • 34250805982 scopus 로고    scopus 로고
    • MicroRNA targeting specificity in mammals: determinants beyond seed pairing
    • Grimson A, Farh KK, Johnston WK, Garrett-Engele P, Lim LP, et al. (2007) MicroRNA targeting specificity in mammals: determinants beyond seed pairing. Mol Cell 27: 91-105.
    • (2007) Mol Cell , vol.27 , pp. 91-105
    • Grimson, A.1    Farh, K.K.2    Johnston, W.K.3    Garrett-Engele, P.4    Lim, L.P.5
  • 28
    • 70449482138 scopus 로고    scopus 로고
    • Assessment of the swine protein-annotated oligonucleotide microarray
    • Steibel JP, Wysocki M, Lunney JK, Ramos AM, Hu ZL, et al. (2009) Assessment of the swine protein-annotated oligonucleotide microarray. Anim Genet 40: 883-893.
    • (2009) Anim Genet , vol.40 , pp. 883-893
    • Steibel, J.P.1    Wysocki, M.2    Lunney, J.K.3    Ramos, A.M.4    Hu, Z.L.5
  • 30
    • 0033572284 scopus 로고    scopus 로고
    • The lin-4 regulatory RNA controls developmental timing in Caenorhabditis elegans by blocking LIN-14 protein synthesis after the initiation of translation
    • Olsen PH, Ambros V, (1999) The lin-4 regulatory RNA controls developmental timing in Caenorhabditis elegans by blocking LIN-14 protein synthesis after the initiation of translation. Dev Biol 216: 671-680.
    • (1999) Dev Biol , vol.216 , pp. 671-680
    • Olsen, P.H.1    Ambros, V.2
  • 31
    • 77949478630 scopus 로고    scopus 로고
    • Brain renin-angiotensin system: fetal epigenetic programming by maternal protein restriction during pregnancy
    • Goyal R, Goyal D, Leitzke A, Gheorghe CP, Longo LD, (2010) Brain renin-angiotensin system: fetal epigenetic programming by maternal protein restriction during pregnancy. Reprod Sci 17: 227-238.
    • (2010) Reprod Sci , vol.17 , pp. 227-238
    • Goyal, R.1    Goyal, D.2    Leitzke, A.3    Gheorghe, C.P.4    Longo, L.D.5
  • 33
    • 31044444975 scopus 로고    scopus 로고
    • TarBase: A comprehensive database of experimentally supported animal microRNA targets
    • Sethupathy P, Corda B, Hatzigeorgiou AG, (2006) TarBase: A comprehensive database of experimentally supported animal microRNA targets. RNA 12: 192-197.
    • (2006) RNA , vol.12 , pp. 192-197
    • Sethupathy, P.1    Corda, B.2    Hatzigeorgiou, A.G.3
  • 35
    • 77955644289 scopus 로고    scopus 로고
    • Mammalian microRNAs predominantly act to decrease target mRNA levels
    • Guo H, Ingolia NT, Weissman JS, Bartel DP, (2010) Mammalian microRNAs predominantly act to decrease target mRNA levels. Nature 466: 835-840.
    • (2010) Nature , vol.466 , pp. 835-840
    • Guo, H.1    Ingolia, N.T.2    Weissman, J.S.3    Bartel, D.P.4
  • 36
    • 77955101812 scopus 로고    scopus 로고
    • Computational methods to identify miRNA targets
    • Hammell M, (2010) Computational methods to identify miRNA targets. Seminars in Cell & Developmental Biology 21: 738-744.
    • (2010) Seminars in Cell & Developmental Biology , vol.21 , pp. 738-744
    • Hammell, M.1
  • 37
    • 79954592065 scopus 로고    scopus 로고
    • Up-regulation of key microRNAs, and inverse down-regulation of their predicted oxidative phosphorylation target genes, during aging in mouse brain
    • Li N, Bates DJ, An J, Terry DA, Wang E, (2011) Up-regulation of key microRNAs, and inverse down-regulation of their predicted oxidative phosphorylation target genes, during aging in mouse brain. Neurobiol Aging 32: 944-955.
    • (2011) Neurobiol Aging , vol.32 , pp. 944-955
    • Li, N.1    Bates, D.J.2    An, J.3    Terry, D.A.4    Wang, E.5
  • 38
    • 78651253572 scopus 로고    scopus 로고
    • Integrated profiling of microRNAs and mRNAs: microRNAs located on Xq27.3 associate with clear cell renal cell carcinoma
    • Zhou L, Chen J, Li Z, Li X, Hu X, et al. (2010) Integrated profiling of microRNAs and mRNAs: microRNAs located on Xq27.3 associate with clear cell renal cell carcinoma. PLoS One 5: e15224.
    • (2010) PLoS One , vol.5
    • Zhou, L.1    Chen, J.2    Li, Z.3    Li, X.4    Hu, X.5
  • 39
    • 23344452109 scopus 로고    scopus 로고
    • Translation termination is involved in histone mRNA degradation when DNA replication is inhibited
    • Kaygun H, Marzluff WF, (2005) Translation termination is involved in histone mRNA degradation when DNA replication is inhibited. Mol Cell Biol 25: 6879-6888.
    • (2005) Mol Cell Biol , vol.25 , pp. 6879-6888
    • Kaygun, H.1    Marzluff, W.F.2
  • 42
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • Tusher VG, Tibshirani R, Chu G, (2001) Significance analysis of microarrays applied to the ionizing radiation response. Proc Natl Acad Sci U S A 98: 5116-5121.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , pp. 5116-5121
    • Tusher, V.G.1    Tibshirani, R.2    Chu, G.3
  • 43
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
    • Livak KJ, Schmittgen TD, (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 25: 402-408.
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.