Microarray profiling for differential gene expression in PMSG-hCG stimulated preovulatory ovarian follicles of Chinese Taihu and Large White sows

BMC Genomics

Volumn 12, Issue , 2011, Pages

  Sun, Xiaojie ^a   Mei, Shuqi ^b   Tao, Hu ^a   Wang, Guodong ^a   Su, Lina ^a   Jiang, Siwen ^a   Deng, Changyan ^a   Xiong, Yuanzhu ^a   Li, Fenge ^a  

^a BEIJING UNIVERSITY OF POSTS AND TELECOMMUNICATIONS   (China)

^b INSTITUTE OF PLANT PROTECTION   (China)

Author keywords

[No Author keywords available]

Indexed keywords

BONE MORPHOGENETIC PROTEIN RECEPTOR 1B; CHORIONIC GONADOTROPIN; PROTEIN BAX; PROTEIN P53; SERIC GONADOTROPIN; WNT10B PROTEIN; PMSG HCG; PMSG-HCG;

ALLELE; ANIMAL TISSUE; ARTICLE; BIOLOGICAL ACTIVITY; BREED DIFFERENCE; CELL COMMUNICATION; CONTROLLED STUDY; DKK2 GENE; DNA MICROARRAY; ESTRUS CYCLE; FEMALE; GENE; GENE EXPRESSION PROFILING; GENE FREQUENCY; GENE FUNCTION; GENE IDENTIFICATION; GENE LOCATION; GENETIC MARKER; NONHUMAN; OVARY FOLLICLE; OVULATION; PIG FARMING; QUANTITATIVE TRAIT LOCUS; REAL TIME POLYMERASE CHAIN REACTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SIGNAL TRANSDUCTION; SINGLE NUCLEOTIDE POLYMORPHISM; SWINE; ANIMAL; BIOLOGY; BREEDING; DRUG COMBINATION; DRUG EFFECT; GENE EXPRESSION REGULATION; GENETICS; LITTER SIZE; METABOLISM; REPRODUCTION;

PIERIS BRASSICAE; SUIDAE; SUS;

ANIMALS; BREEDING; CHORIONIC GONADOTROPIN; COMPUTATIONAL BIOLOGY; DRUG COMBINATIONS; FEMALE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE FREQUENCY; GONADOTROPINS, EQUINE; LITTER SIZE; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; OVARIAN FOLLICLE; POLYMORPHISM, SINGLE NUCLEOTIDE; QUANTITATIVE TRAIT LOCI; REPRODUCTION; SWINE;

EID: 79951555783     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-12-111     Document Type: Article

References (48)

1. Rothschild MF, Jacobson C, Vaske A, Tuggle K, Wang L, Short H, Eckardt GR, Sasaki S, Vincent A, McLaren DG. The estrogen receptor locus is associated with a major gene influencing litter size in pigs. Proc Natl Acad Sci USA 1996, 93:201-205. 10.1073/pnas.93.1.201, 40206, 8552604.
2. Gladney CD, Bertani GR, Johnson RK, Pomp D. Evaluation of gene expression in pigs selected for enhanced reproduction using differential display PCR and human microarrays: I. Ovarian follicles. J Anim Sci 2004, 82:17-31.
3. Zhang WC, Wu JS, Rempel WE. Some performance characteristics of prolific breeds of pigs in China. Livest Prod Sci 1983, 10:59-68.
4. Haley CS, Lee GJ. Genetic components of litter size in Meishan and Large White pigs and their crosses. In Proc 4th World Congr Genet Appl to Livest Prod: 23-27 July 1990; Edinburgh 1990, XV:458-461. Organizing Committee, 4th World Congress on Genetics Applied to Livestock Production, Hill WG, Thompson R, Woolliams JA.
5. Vallet JL, Freking BA, Leymaster KA, Christenson RK. Allelic variation in the erythropoietin receptor gene is associated with uterine capacity and litter size in swine. Anim Genet 2005, 36:97-103. 10.1111/j.1365-2052.2005.01233.x, 15771717.
6. Bazer FW, Thatcher WW, Martinat-Botte F, Terqui M. Conceptus development in Large White and prolific Chinese Meishan pigs. J Reprod Fertil 1988, 84:37-42. 10.1530/jrf.0.0840037, 3184056.
7. Bolet G, Martinat-Botte F, Locatelli P, Gruand J, Terqui M, Berthelot F. Components of prolificacy in hyperprolific Large White sows compared with the Meishan and Large White breeds. Genet Sel Evol 1986, 18:333-342.
8. Ross JW, Ashworth MD, Hurst AG, Malayer JR, Geiser RD. Analysis and characterization of differential gene expression during rapid trophoblastic elongation in the pig using suppression subtractive hybridization. Reprod Biol Endocrinol 2003, 1:23. 10.1186/1477-7827-1-23, 151795, 12646053.
9. Vallée M, Beaudry D, Roberge C, Matte JJ, Blouin R, Palin MF. Isolation of differentially expressed genes in conceptuses and endometrial tissue of sows in early gestation. Biol Reprod 2003, 69:1697-1706.
10. Østrup E, Bauersachs S, Blum H, Wolf E, Hyttel P. Differential endometrial gene expression in pregnant and nonpregnant sows. Biol Reprod 2010, 83:277-285.
11. Zhou QY, Fang MD, Huang TH, Li CC, Yu M, Zhao SH. Detection of differentially expressed genes between Erhualian and Large White placentas on day 75 and 90 of gestation. BMC Genomics 2009, 10:337. 10.1186/1471-2164-10-337, 2724418, 19630995.
12. Caetano AR, Johnson RK, Ford JJ, Pomp D. Microarray profiling for differential gene expression in ovaries and ovarian follicles of pigs selected for increased ovulation rate. Genetics 2004, 168:1529-1537. 10.1534/genetics.104.029595, 1448805, 15579704.
13. Rathje TA, Rohrer GA, Johnson RK. Evidence for quantitative trait loci affecting ovulation rate in pigs. J Anim Sci 1997, 75:1486-1494.
14. Wilkie PJ, Paszek AA, Beattie CW, Alexander LJ, Wheeler MB, Schook LB. A genomic scan of porcine reproductive traits reveals possible quantitative trait loci (QTL) for number of corpora lutea. Mamm Genome 1999, 10:573-578. 10.1007/s003359901047, 10341088.
15. Braunschweig MH, Paszek AA, Weller JI, Yang D, Hawken RJ, Wheeler MB, Schook LB, Alexander LJ. Generation and exploration of a dense genetic map in a region of a QTL affecting corpora lutea in a Meishan × Yorkshire cross. Mamm Genome 2001, 12:719-729. 10.1007/s003350020040, 11641720.
16. King AH, Jiang Z, Gibson JP, Haley CS, Archibald AL. Mapping quantitative trait loci affecting female reproductive traits on porcine chromosome 8. Biol Reprod 2003, 68:2172-2179. 10.1095/biolreprod.102.012955, 12606397.
17. Campbell EM, Nonneman D, Rohrer GA. Fine mapping a quantitative trait locus affecting ovulation rate in swine on chromosome 8. J Anim Sci 2003, 81:1706-1714.
18. Rohrer GA, Ford JJ, Wise TH, Vallet JL, Christenson RK. Identification of quantitative trait loci affecting female reproductive traits in a multi-generation Meishan × White composite swine population. J Anim Sci 1999, 77:1385-1391.
19. Rohrer GA, Wise TH, Lunstra DD, Ford JJ. Identification of genomic regions controlling plasma FSH concentrations in Meishan-White Composite boars. Physiol Genomics 2001, 6:145-151.
20. Laenoi W, Knorr C, Charoensook R, Gatphayak K, Vearaslip T, ter Meuleu U, Brenig B. Molecular characterization and chromosomal assignment of porcine BAX and Tac1 genes. In Proceedings of international research on food security, natural resource management and rural development: 11-13 October 2006; Bonn 2006, 310. University of Bonn, Folkard Asch, Mathias Becker, Andreas Deininger, Prathap Pugalenthi.
21. Wilmut I, Galvin JM, Day BN, Haley CS. How does the Meishan pig achieve its prolificacy [abstract]?. J Reprod Fertil 1991, 7:65.
22. Amsterdam A, Keren-Tal I, Aharoni D, Dantes A, Land-Bracha A, Rimon E, Sasson R, Hirsh L. Steroidogenesis and apoptosis in the mammalian ovary. Steroids 2003, 68:861-867. 10.1016/j.steroids.2003.09.003, 14667978.
23. Cherian-Shaw M, Das R, Vandevoort CA, Chaffin CL. Regulation of steroidogenesis by p53 in macaque granulosa cells and H295R human adrenocortical cells. Endocrinology 2004, 145:5734-5744. 10.1210/en.2004-0253, 15331571.
24. Vainio S, Heikkila M, Kispert A, Chin N, McMahon AP. Female development in mammals is regulated by Wnt-4 signalling. Nature 1999, 397:405-409. 10.1038/17068, 9989404.
25. Witte F, Dokas J, Neuendorf F, Mundlos S, Stricker S. Comprehensive expression analysis of all Wnt genes and their major secreted antagonists during mouse limb development and cartilage differentiation. Gene Expr Patterns 2009, 9:215-223. 10.1016/j.gep.2008.12.009, 19185060.
26. Katoh M. Molecular cloning and characterization of LZIC, a novel gene encoding ICAT homologous protein with leucine zipper domain. Int J Mol Med 2001, 8:611-615.
27. Greenfeld CR, Pepling ME, Babus JK, Furth PA, Flaw JA. BAX regulates follicular endowment in mice. Reproduction 2007, 133:865-876. 10.1530/REP-06-0270, 17616717.
28. Biggs C, Tilton JE, Craigon JC, Foxcroft GR, Ashworth CA, Hunter MG. Comparison of follicular heterogeneity and ovarian characteristics in Meishan and Large-White hybrid pigs. J Reprod Fertil 1993, 97:263-269. 10.1530/jrf.0.0970263, 8464019.
29. Kino T, Ichijo T, Chrousos GP. FLASH interacts with p160 coactivator subtypes and differentially suppresses transcriptional activity of steroid hormone receptors. J Steroid Biochem Mol Biol 2004, 92:357-363. 10.1016/j.jsbmb.2004.09.003, 15698540.
30. Wang Z, Liu BC, Lin GT, Lin CS, Lue TF, Willingham E, Baskin LS. Up- regulation of estrogen responsive genes in hypospadias: microarray analysis. J Urol 2007, 177:1939-1946. 10.1016/j.juro.2007.01.014, 17437852.
31. Kauffman AS, Buenzle J, Fraley GS, Rissman EF. Effects of galanin-like peptide (GALP) on locomotion, reproduction, and body weight in female and male mice. Horm Behav 2005, 48:141-151. 10.1016/j.yhbeh.2005.01.010, 16042964.
32. Richards JS, Russell DL, Ochsner S, Hsieh M, Doyle KH, Falender AE, Lo YK, Sharma SC. Novel signaling pathways that control ovarian follicular development, ovulation, and luteinization. Recent Prog Horm Res 2002, 57:195-220. 10.1210/rp.57.1.195, 12017544.
33. Mulsant P, Lecerf F, Fabre S, Schibler L, Monget P, Lanneluc I, Pisselet C, Riquet J, Monniaux D, Callebaut I, Cribiu E, Thimonier J, Teyssier J, Bodin L, Cognie Y, Chitour N, Elsen JM. Mutation in bone morphogenetic protein receptor-IB is associated with increased ovulation rate in Booroola Merino ewes. Proc Natl Acad Sci USA 2001, 98:5104-5109. 10.1073/pnas.091577598, 33171, 11320249.
34. Souza CJH, MacDougall C, Campbell BK, McNeilly AS, Baird DT. The Booroola (FecB) phenotype is associated with a mutation in the bone morphogenetic receptor type 1 B (BMPR1B) gene. J Endocrinol 2001, 169:R1-R6. 10.1677/joe.0.169R001, 11312159.
35. Wilson T, Wu XY, Juengel JL, Ross IK, Lumsden JM, Lord EA, Dodds KG, Walling GA, McEwan JC, O'Connell AR, McNatty KP, Montgomery GW. Highly prolific Booroola sheep have a mutation in the intracellular kinase domain of bone morphogenetic protein IB receptor (ALK-6) that is expressed in both oocytes and granulosa cells. Biol Reprod 2001, 64:1225-1235. 10.1095/biolreprod64.4.1225, 11259271.
36. Kim JG, Song JH, Vallet JL, Rohrer GA, Johnson GA, Joyce MM, Christenson RK. Molecular characterization and expression of porcine bone morphogenetic protein receptor-IB in the uterus of cyclic and pregnant gilts. Biol Reprod 2003, 68:735-743. 10.1095/biolreprod.102.008433, 12604620.
37. Chabot B, Stephenson DA, Chapman VM, Besmer P, Bernstein A. The proto-oncogene c-kit encoding a transmembrane tyrosine kinase receptor maps to the mouse W locus. Nature 1988, 335:88-89. 10.1038/335088a0, 2457811.
38. Parrott JA, Skinner MK. Kit-ligand/stem cell factor induces primordial follicle development and initiates folliculogenesis. Endocrinology 1999, 140:4262-4271. 10.1210/en.140.9.4262, 10465300.
39. Sakurai M, Zhou JH, Ohtaki M, Itoh T, Murakami Y, Yasue H. Assignment of c-KIT gene to swine chromosome 8p12-p21 by fluorescence in situ hybridization. Mamm Genome 1996, 7(5):397. 10.1007/BF03035316, 8661742.
40. Soller M. Marker assisted selection - an overview. Anim Biotech 1994, 5:193-207.
41. Rothschild MF, Messer L, Day A, Wales R, Short TH, Southwood OI, Plastow G. Investigation of the retinol-binding protein 4 (RBP4) gene as a candidate gene for increased litter size in pigs. Mamm Genome 2000, 11:75-77. 10.1007/s003350010015, 10602998.
42. Li N, Zhao YF, Xiao L, Zeng FJ, Chen YZ, Dai RJ, Zang JS, Shen SQ, Chen YF, Wu CX. Candidate gene analysis for identification of genetic loci controlling litter size in swine. In Proc 6th World Congr Genet Appl Livest Prod, 11-16 January 1998; Armidale, Australia 1998, 26:183-186. World Congress on Genetics Applied to Livestock Production: Organizing Committee, 6th World Congress on Genetics Applied to Livestock Production.
43. Vincent A, Evans G, Short TH, Southwood OI, Plastow GS, Tuggle CK, Rothschild MF. The prolactin receptor gene is associated with increased litter size in pigs. In Proc 6th World Congr Genet Appl Livest Prod, 11-16 January 1998; Armidale, Australia 1998, 27:15-18. World Congress on Genetics Applied to Livestock Production: Organizing Committee, 6th World Congress on Genetics Applied to Livestock Production.
44. Lee SJ, Liu J, Qi N, Guarnera RA, Lee SY, Cicila GT. Use of a panel of congenic strains to evaluate differentially expressed genes as candidate genes for blood pressure quantitative trait loci. Hypertens Res 2003, 26:75-87. 10.1291/hypres.26.75, 12661916.
45. Tomas A, Frigo E, Casellas J, Rami{dotless}rez O, Ovilo C, Noguera JL, Sanchez A. An association study between polymorphisms of the porcine bone morphogenetic protein receptor type 1b (BMPR1B) and reproductive performance of Iberian X Meishan F2 sows. Anim Genet 2006, 37:297-298. 10.1111/j.1365-2052.2006.01456.x, 16734701.
46. Torner H, Brussow KP, Alm H, Ratky J, Kanitz W. Morphology of porcine cumulus-oocyte-complexes depends on the stage of preovulatory maturation. Theriogenology 1998, 50:39-48. 10.1016/S0093-691X(98)00111-3, 10734472.
47. Luo L, Ye L, Liu G, Shao G, Zheng R, Ren Z, Zuo B, Xu D, Lei M, Jiang S, Deng C, Xiong Y, Li F. Microarray-based approach identifies differentially expressed microRNAs in porcine sexually immature and mature testes. PLoS ONE 2010, 5:e11744. 10.1371/journal.pone.0011744, 2923610, 20805883.
48. Zhang YH, Mei SQ, Peng XW, Niu BY, Ren ZQ, Zuo B, Xu DQ, Lei MG, Zheng R, Jiang SW, Deng CY, Xiong YZ, Li FE. Molecular characterization and SNPs analysis of the porcine Deleted in AZoospermia Like (pDAZL) gene. Anim Reprod Sci 2009, 112:415-422. 10.1016/j.anireprosci.2008.05.069, 18620821.