Biogeographic and diversification patterns of Neotropical Troidini butterflies (Papilionidae) support a museum model of diversity dynamics for Amazonia

BMC Evolutionary Biology

Volumn 12, Issue 1, 2012, Pages

  Condamine, Fabien L ^a,b   Silva Brandão, Karina L ^c   Kergoat, Gael J ^a   Sperling, Felix A H ^d  

^a CENTRE DE BIOLOGIE ET DE GESTION DES POPULATIONS   (France)

^b CENTRE DE MATHÉMATIQUES APPLIQUÉES   (France)

^c UNIVERSITY OF SÃO PAULO   (Brazil)

^d UNIVERSITY OF ALBERTA   (Canada)

Author keywords

Amazon rainforest; Andean uplift; Biogeography; Diversification; GAARlandia connection; Swallowtail butterflies

Indexed keywords

BIOLOGICAL INVASION; BUTTERFLY; CENOZOIC; CLIMATE CONDITIONS; DATA SET; DIVERGENCE; EOCENE; GENETIC ANALYSIS; MACROECOLOGY; MOLECULAR ANALYSIS; MUSEUM; NEOTROPICAL REGION; PHYLOGENY; PHYLOGEOGRAPHY; SPECIES DIVERSITY; ZOOGEOGRAPHY;

AMAZONIA;

BATTUS; EURYADES; HEXAPODA; PAPILIONIDAE; PAPILIONINAE; PAPILIONOIDEA; PARIDES; TROIDINI;

ANIMAL; ARISTOLOCHIA; ARTICLE; BAYES THEOREM; BIODIVERSITY; BUTTERFLY; CLASSIFICATION; GENETICS; PHYLOGEOGRAPHY; SOUTH AMERICA; SPECIES DIFFERENTIATION;

ANIMALS; ARISTOLOCHIA; BAYES THEOREM; BIODIVERSITY; BUTTERFLIES; GENETIC SPECIATION; PHYLOGEOGRAPHY; SOUTH AMERICA;

EID: 84861977919     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-12-82     Document Type: Article

References (75)

1. Biodiversity hotspots for conservation priorities. Myers N, Mittermeier RA, Mittermeier CG, da Fonseca GAB, Kent J, Nature 2000 403 853 858 10.1038/35002501 10706275
2. Angiosperm biogeography and past continental movements. Raven PH, Axelrod DI, Ann Missouri Bot Gard 1974 61 539 673 10.2307/2395021
3. Speciation patterns in the Amazonian forest biota. Simpson G, Haffer J, Annu Rev Ecol Evol Syst 1978 9 497 518 10.1146/annurev.es.09.110178.002433
4. Neotropical floristic diversity: phytogeographical connections between Central and South America, Pleistocene climatic fluctuations, or an accident of the Andean orogeny? Gentry AH, Ann Mo Bot Gard 1982 69 557 593 10.2307/2399084
5. Island radiation on a continental scale: exceptional rates of plant diversification after uplift of the Andes. Hughes C, Eastwood SV, Proc Natl Acad Sci USA 2006 103 10334 10339 10.1073/pnas.0601928103 16801546
6. Tracing the impact of the Andean uplift on Neotropical plant evolution. Antonelli A, Nylander JAA, Persson C, Sanmartín I, Proc Natl Acad Sci USA 2009 106 9749 9754 10.1073/pnas.0811421106 19470489
7. From Africa via Europe to South America: migrational route of a species-rich genus of Neotropical lowland rain forest trees (Guatteria, Annonaceae). Erkens RHJ, Maas JW, Couvreur TLP, J Biogeogr 2009 36 2338 2352 10.1111/j.1365-2699.2009.02162.x
8. Origin and global diversification patterns of tropical rain forests: inferences from a complete genus-level phylogeny of palms. Couvreur TLP, Forest F, Baker W, BMC Biol 2011 9 44 10.1186/1741-7007-9-44 21679405
9. The role of immigrants in the assemblage of the South American rainforest tree flora. Pennington RT, Dick CW, Philos Trans R Soc B 2004 359 1611 1622 10.1098/rstb.2004.1532
10. Wallace AR, Tropical Nature, and Other Essays Macmillan: London 1978
11. Latitudinal variation in organic diversity. Fischer AG, Evolution 1960 14 64 81 10.2307/2405923
12. Speciation in Amazonian forest birds. Haffer J, Science 1969 165 131 137 10.1126/science.165.3889.131 17834730
13. Tropical forests are both evolutionary cradles and museums of leaf beetle diversity. McKenna DD, Farrell BD, Proc Natl Acad Sci USA 2006 103 10947 10951 10.1073/pnas.0602712103 16818884
14. Why are there so many plant species in the Neotropics? Antonelli A, Sanmartín I, Taxon 2011 60 403 414
15. Hoorn CM, Wesselingh FP, Amazonia, Landscape and Species Evolution: A Look into the Past Wiley-Blackwell: London 1 2010
16. Mass Extinction, gradual cooling, or rapid radiation? Reconstructing the spatiotemporal evolution of the ancient Angiosperm genus Hedyosmum (Chloranthaceae) using empirical and simulated approaches. Antonelli A, Sanmartín I, Syst Biol 2011 60 596 615 10.1093/sysbio/syr062 21856636
17. Phylogenetic origins of local-scale diversity patterns and causes of Amazonian megadiversity. Wiens JJ, Pyron RA, Moen DC, Ecol Lett 2011 14 643 652 10.1111/j.1461-0248.2011.01625.x 21535341
18. Diversification of rainforest faunas: An integrated molecular approach. Moritz C, Patton JL, Schneider CJ, Smith TB, Annu Rev Ecol Evol Syst 2000 31 533 563 10.1146/annurev.ecolsys.31.1.533
19. Predictions and tests of climate-based hypotheses of broad-scale variation in taxonomic richness. Currie DJ, Mittelbach GG, Cornell HV, Field R, Guégan J-F, Hawkins BA, Kaufman DM, Kerr JT, Oberdorff T, OBrien E, Turner JRG, Ecol Lett 2004 7 1121 1134 10.1111/j.1461-0248.2004.00671.x
20. Climate as a driver of evolutionary change. Erwin DH, Curr Biol 2009 19 575 583 10.1016/j.cub.2009.05.047
21. Accelerated rates of climatic-niche evolution underlie rapid species diversification. Kozak KH, Wiens JJ, Ecol Lett 2010 13 1378 1389 10.1111/j.1461-0248.2010.01530.x 20875038
22. Historical biogeography, ecology and species richness. Wiens JJ, Donoghue MJ, Trends Ecol Evol 2004 19 639 644 10.1016/j.tree.2004.09.011 16701326
23. Evolutionary and biogeographic origins of high tropical diversity in old world frogs (Ranidae). Wiens JJ, Sukumaran J, Pyron RA, Brown RM, Evolution 2009 63 1217 1231 10.1111/j.1558-5646.2009.00610.x 19154386
24. Evolution and the latitudinal diversity gradient: speciation, extinction and biogeography. Mittelbach GG, Schemske DW, Cornell HV, Allen AP, Brown JM, Bush MB, Harrison SP, Hurlbert AH, Knowlton N, Lessios HA, McCain CM, McCune AR, McDade LA, McPeek MA, Near TJ, Price TD, Ricklefs RE, Roy K, Sax DF, Schluter D, Sobel JM, Turelli M, Ecol Lett 2007 10 315 331 10.1111/j.1461-0248.2007. 01020.x 17355570
25. Macroevolution of insect-plant associations: the relevance of host biogeography to host affiliation. Becerra JX, Venable DL, Proc Natl Acad Sci USA 1999 96 12625 12631
26. Repeated climate-linked host shifts have promoted diversification in a temperate clade of leaf-mining flies. Winkler IS, Mitter C, Scheffer SJ, Proc Natl Acad Sci USA 2009 106 18103 18108 10.1073/pnas.0904852106 19805134
27. Tyler HA, Brown KS, Wilson K, Swallowtail Butterflies of the Americas: a Study in Biological Dynamics, Ecological Diversity, Biosystematics, and Conservation Scientific Publishers: Gainesville 1994
28. Phylogenetic relationships of the New World Troidini swallowtails (Lepidoptera: Papilionidae) based on COI, COII, and EF-1 genes. Silva-Brandão KL, Freitas AVL, Brower AVZ, Solferini VN, Mol Phylogenet Evol 2005 36 468 483 10.1016/j.ympev.2005.04.007 15953737
29. The Genus Parides: An Unended Quest. Racheli T, Butterflies of the World Keltern, Deutschland: Goecke and Evers, Bauer F, Frankenbach T, 2006 116
30. When and where did troidine butterflies (Lepidoptera: Papilionidae) evolve? Phylogenetic and biogeographic evidence suggests an origin in remnant Gondwana in the Late Cretaceous. Braby MF, Trueman JWH, Eastwood R, Invert Syst 2005 19 113 143 10.1071/IS04020
31. Phylogeny, host plant associations and divergence time of Papilioninae (Lepidoptera: Papilionidae) inferred from morphology and seven genes with special focus on the enigmatic genera Teinopalpus and Meandrusa. Simonsen TJ, Zakharov EV, Djernaes M, Cotton AM, Vane-Wright RI, Sperling FAH, Cladistics 2011 27 113 137 10.1111/j.1096-0031.2010.00326.x
32. Butterflies and plants: a study in coevolution. Ehrlich PR, Raven PH, Evolution 1964 18 586 608 10.2307/2406212
33. Host plant association patterns and phylogeny in the tribe Troidini (Lepidoptera: Papilionidae). Weintraub JD, Swallowtail Butterflies: their Ecology and Evolutionary Biology Gainesville: Scientific Publishers, Scriber JM, Tsubaki Y, Lederhouse RC, 1995 307 316
34. Use of host plants by Troidini butterflies (Papilionidae, Papilioninae): constraints on host shift. Silva-Brandão KL, Solferini VN, Biol J Linn Soc 2007 90 247 261 10.1111/j.1095-8312.2007.00727.x
35. Host shifts and evolutionary radiations of butterflies. Fordyce JA, Proc R Soc B 2010 277 3735 3743 10.1098/rspb.2010.0211 20610430
36. What causes latitudinal gradients in species diversity? Evolutionary processes and ecological constraints on swallowtail biodiversity. Condamine FL, Sperling FAH, Wahlberg N, Rasplus J-Y, Kergoat GJ, Ecol Lett 2012 15 264 277
37. Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times. Ho SYW, Phillips MJ, Syst Biol 2009 58 367 380 10.1093/sysbio/syp035 20525591
38. A partitioned likelihood analysis of swallowtail butterfly Phylogeny (Lepidoptera: Papilionidae). Caterino MS, Reed RD, Kuo MM, Sperling FAH, Syst Biol 2001 50 106 127 12116588
39. New evidence on the systematic and phylogenetic position of Parides burchellanus (Lepidoptera: Papilionidae). Silva-Brandão KL, Azeredo AML, Freitas AVL, Mol Ecol Resources 2008 8 502 511 10.1111/j.1471-8286.2007.02022.x
40. Clustal W and Clustal X version 2.0. Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibson TJ, Higgins DG, Bioinfo 2007 23 2947 2948 10.1093/bioinformatics/btm404
41. Sequence-based species delimitation for the DNA taxonomy of undescribed insects. Pons J, Barraclough TG, Gámez-Zurita J, Cardoso A, Duran DP, Hazell S, Kamoun S, Sumlin WD, Vogler AP, Syst Biol 2006 55 595 609 10.1080/10635150600852011 16967577
42. Likelihood methods for detecting temporal shifts in diversification rates. Rabosky DL, Evolution 2006 60 1152 1164 16892966
43. APE: analyses of phylogenetics and evolution in R language. Paradis E, Claude J, Strimmer K, Bioinfo 2004 20 289 290 10.1093/bioinformatics/btg412
44. Biological identifications through DNA barcodes. Hebert PDN, Cywinska A, Ball SL, DeWaard JR, Proc R Soc B 2003 270 313 321 10.1098/rspb.2002.2218 12614582
45. Estimating divergence times in large phylogenetic trees. Britton T, Anderson CL, Jacquet D, Lundqvist S, Bremer K, Syst Biol 2007 56 541 752
46. jModelTest: phylogenetic model averaging. Posada D, Mol Biol Evol 2008 25 1253 1256 10.1093/molbev/msn083 18397919
47. The importance of data partitioning and the utility of Bayes factors in Bayesian phylogenetics. Brown JM, Lemmon AR, Syst Biol 2007 56 643 655 10.1080/10635150701546249 17661232
48. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, Gascuel O, Syst Biol 2010 59 307 321 10.1093/sysbio/syq010 20525638
49. Felsenstein J, Inferring Phylogenies Massachusetts, Sinauer: Sunderland 2004
50. MrBayes 3: Bayesian phylogenetic inference under mixed models. Ronquist F, Huelsenbeck JP, Bioinfo 2003 19 1572 1574 10.1093/bioinformatics/btg180
51. Bayes factors. Kass RE, Raftery AE, J Am Stat Assoc 1995 90 773 795 10.1080/01621459.1995.10476572
52. Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Shimodaira H, Hasegawa M, Mol Biol Evol 1999 16 1114 1116 10.1093/oxfordjournals.molbev.a026201
53. Relaxed phylogenetics and dating with confidence. Drummond AJ, Ho SYW, Phillips MJ, Rambaut A, PLoS Biol 2006 4 88 10.1371/journal.pbio.0040088 16683862
54. BEAST: Bayesian evolutionary analysis by sampling trees. Drummond AJ, Rambaut A, BMC Evol Biol 2007 7 214 10.1186/1471-2148-7-214 17996036
55. Maximum-likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesis. Ree RH, Smith SA, Syst Biol 2008 57 4 14 18253896
56. Scotese CR, Atlas of Earth History. Volume 1. Paleogeography Arlington, Texas: PALEOMAP Project 2001
57. Historical biogeography, divergence times, and diversification patterns of bumble bees (Hymenoptera: Apidae: Bombus). Hines HM, Syst Biol 2008 57 58 75 10.1080/10635150801898912 18275002
58. Meso-Cenozoic Caribbean paleogeography: Implications for the historical biogeography of the region. Iturralde-Vinent MA, Int Geol Rev 2006 48 791 827 10.2747/0020-6814.48.9.791
59. Out of the Andes: patterns of diversification in clearwing butterflies. Elias M, Joron M, Willmott K, Silva-Brandão KL, Kaiser V, Arias CF, Pinerez GLM, Uribe S, Brower AVZ, Freitas AVL, Jiggins CD, Mol Ecol 2009 18 1716 1729 10.1111/j.1365-294X.2009.04149.x 19386035
60. The Central American land bridge as an engine of diversification in New World doves. Johnson KP, Weckstein JD, J Biogeogr 2011 38 1069 1076 10.1111/j.1365-2699.2011.02501.x
61. GEIGER: Investigating evolutionary radiations. Harmon LJ, Weir J, Brock C, Glor RE, Challenger W, Bioinfo 2008 24 129 131 10.1093/bioinformatics/btm538
62. LASER: a maximum likelihood toolkit for detecting temporal shifts in diversification rates from molecular phylogenies. Rabosky DL, Evol Bioinfo Online 2006 2 257 260
63. Absolute diversification rates in angiosperm clades. Magallán S, Sanderson MJ, Evolution 2001 55 1762 1780 11681732
64. Testing macro-evolutionary models using incomplete molecular phylogenies. Pybus OG, Harvey PH, Proc R Soc B 2000 267 2267 2272 10.1098/rspb.2000.1278 11413642
65. Density-dependent diversification in North American wood warblers. Rabosky DL, Lovette IJ, Proc R Soc B 2008 275 2363 2371 10.1098/rspb.2008.0630 18611849
66. Colonizing the Caribbean: is the GAARlandia land-bridge hypothesis gaining a foothold? Ali JR, J Biogeogr 2012 39 431 433 10.1111/j.1365-2699.2011. 02674.x
67. Colonization of and radiation in South America by butterflies in the subtribe Phyciodina (Lepidoptera: Nymphalidae). Wahlberg N, Freitas AVL, Mol Phylogenet Evol 2007 44 1257 1272 10.1016/j.ympev.2007.04.012 17560801
68. Biogeographic history of the butterfly subtribe Euptychiina (Lepidoptera, Nymphalidae, Satyrinae). Pẽa C, Nylin S, Freitas AVL, Wahlberg N, Zoolog Scripta 2010 39 243 258 10.1111/j.1463-6409.2010.00421.x
69. Amazonia through time: Andean uplift, climate change, landscape evolution and biodiversity. Hoorn C, Wesselingh FP, ter Steege H, Bermudez MA, Mora A, Sevink J, Sanmartín I, Sánchez-Meseguer A, Anderson CL, Figueiredo JP, Jaramillo C, Riff D, Negri FR, Hooghiemstra H, Lundberg J, Stadler T, Särkinen T, Antonelli A, Science 2010 330 927 931 10.1126/science.1194585 21071659
70. Rapid diversification and not clade age explains high diversity in Neotropical Adelpha butterflies. Mullen SP, Savage WK, Wahlberg N, Willmot KR, Proc R Soc B 2011 278 1777 1785 10.1098/rspb.2010.2140 21106589
71. Temporal patterns of diversification in Andean Eois, a species-rich clade of moth (Lepidoptera, Geometridae). Strutzenberger P, Fielder K, J Evol Biol 2011 24 919 925 10.1111/j.1420-9101.2010.02216.x 21401769
72. Diversity begets diversity: host expansions and the diversification of plant-feeding insects. Janz N, Nylin S, Wahlberg N, BMC Evol Biol 2006 6 4 10.1186/1471-2148-6-4 16420707
73. Towards integrative taxonomy. Dayrat B, Biol J Linn Soc 2005 85 407 415 10.1111/j.1095-8312.2005.00503.x
74. Ecological limits and diversification rate: alternative paradigms to explain the variation in species richness among clades and regions. Rabosky DL, Ecol Lett 2009 12 735 743 10.1111/j.1461-0248.2009.01333.x 19558515
75. Slowdowns in diversification rates from real phylogenies may not be real. Cusimano N, Renner SS, Syst Biol 2010 59 458 464 10.1093/sysbio/syq032 20547781