Testing macro-evolutionary models using incomplete molecular phylogenies

Proceedings of the Royal Society B: Biological Sciences

Volumn 267, Issue 1459, 2000, Pages 2267-2272

  Pybus, O G ^a   Harvey, P H ^a  

^a UNIVERSITY OF OXFORD   (United Kingdom)

Author keywords

Dendroica; Extinction; Phylogeny; Primates; Sorex; Speciation

Indexed keywords

EVOLUTION; EXTINCTION; MOLECULAR ANALYSIS; PHYLOGENY; SPECIATION (BIOLOGY);

ARTICLE; BIODIVERSITY; GENE SEQUENCE; MATHEMATICAL ANALYSIS; NONHUMAN; PHYLOGENY; PRIMATE; PRIORITY JOURNAL; RELIABILITY; SPECIES DIFFERENTIATION; STATISTICAL ANALYSIS;

DENDROICA; PRIMATES; SOREX;

EID: 0034703844     PISSN: 09628452     EISSN: 14712970     Source Type: Journal    
DOI: 10.1098/rspb.2000.1278     Document Type: Article

References (32)

1. Evolutionary trees from DNA sequences: A maximum likelihood approach
2. Molecular phylogeny and evolution of Sorex shrews inferred from mitochondrial DNA sequence data
3. Phylogenies without fossils
4. Using phylogenetic trees to study speciation and extinction
5. A compound Poisson process for relaxing the molecular clock
6. Searching for evolutionary pattern in the shape of a phylogenetic tree
7. Inferring the rates of branching and extinction from molecular phylogenies
8. Explosive speciation in the New World Dendroica warblers
9. Population ecology of some warblers of northeastern coniferous forests
10. Inferring evolutionary process from phylogenetic tree shape
11. Tempo and mode of evolution revealed from molecular phylogenies
12. Extinction rates can be estimated from molecular phylogenies
13. The reconstructed evolutionary process
14. Assessing temporal variations in diversification rates from phylogenies: Estimation and hypothesis testing
15. Detecting shifts in diversification rates without fossils
16. Testing for constant diversification rates using molecular phylogenies: A general approach based on statistical tests for goodness of fit
17. A composite estimate of primate phylogeny
18. Testing macroevolutionary hypotheses
19. Macroevolutionary inferences from primate phylogeny
20. Bi-De: An application for simulating phylogenetic processes
21. End-Epi: An application for inferring phylogenetic and population dynamical processes from molecular sequences
22. Stochastic models of phylogeny and the evolution of diversity
23. A nonparametric approach to estimating divergence times in the absence of rate constancy
24. Shifts in diversification rate with the origin of the angiosperms
25. Reconstructing shifts in diversification rates on phylogenetic trees
26. Testing the stochasticity of patterns of organismal diversity: An improved null model
27. Estimating the rate of evolution of the rate of molecular evolution
28. Recognising the forest for the trees: Testing temporal patterns of cladogenesis using a null model of stochastic diversification
29. Among-site rate variation and its impact on phylogenetic analyses
30. Bayesian phylogenetic inference using DNA sequences: A Markov chain Monte Carlo method
31. Evidence from molecular systematics for decreased avian diversification in the Pleistocene epoch