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Volumn 18, Issue 14, 2012, Pages 2102-2111

RNA G-quadruplexes: G-quadruplexes with "u" turns

Author keywords

Aptamer; Ligand; Loop; Quadruplex; Rna; Splicing; Translation; UTR

Indexed keywords

FRAGILE X MENTAL RETARDATION PROTEIN; GUANINE QUADRUPLEX; IMMUNOGLOBULIN ENHANCER BINDING PROTEIN; MESSENGER RNA; MICROTUBULE ASSOCIATED PROTEIN 1; PROTEIN P53; RNA; SODIUM ION; SOMATOMEDIN B; TELOMERASE REVERSE TRANSCRIPTASE; TUMOR NECROSIS FACTOR;

EID: 84860188058     PISSN: 13816128     EISSN: 18734286     Source Type: Journal    
DOI: 10.2174/138161212799958468     Document Type: Review
Times cited : (19)

References (100)
  • 1
    • 0026554887 scopus 로고
    • Quadruplex structure of Oxytricha telomeric DNA oligonucleotides
    • Smith FW, Feigon J. Quadruplex structure of Oxytricha telomeric DNA oligonucleotides. Nature 1992; 356:164-168.
    • (1992) Nature , vol.356 , pp. 164-168
    • Smith, F.W.1    Feigon, J.2
  • 2
    • 0026530570 scopus 로고
    • Cation-dependent transition between the quadruplex and Watson- Crick hairpin forms of d(CGCG3GCG)
    • Hardin CC, Watson T, Corregan M, Bailey C. Cation-dependent transition between the quadruplex and Watson- Crick hairpin forms of d(CGCG3GCG). Biochemistry 1992; 31: 833-841.
    • (1992) Biochemistry , vol.31 , pp. 833-841
    • Hardin, C.C.1    Watson, T.2    Corregan, M.3    Bailey, C.4
  • 3
    • 0001103466 scopus 로고    scopus 로고
    • Quadruplex structures in nucleic acids
    • Keniry MA. Quadruplex structures in nucleic acids. Biopolymers 2001; 56: 123-146.
    • (2001) Biopolymers , vol.56 , pp. 123-146
    • Keniry, M.A.1
  • 4
    • 0035018021 scopus 로고    scopus 로고
    • G-quadruplex DNA structures-variations on a theme
    • Simonsson T. G-quadruplex DNA structures-variations on a theme. Biol Chem 2001; 382: 621-628.
    • (2001) Biol Chem , vol.382 , pp. 621-628
    • Simonsson, T.1
  • 5
    • 33947310727 scopus 로고    scopus 로고
    • An RNA G-quadruplex in the 5' UTR of the NRAS proto- oncogene modulates translation
    • Kumari S, Bugaut A, Huppert JL, Balasubramanian S. An RNA G-quadruplex in the 5' UTR of the NRAS proto- oncogene modulates translation. Nat Chem Biol. 2007; 3: 218-221.
    • (2007) Nat Chem Biol , vol.3 , pp. 218-221
    • Kumari, S.1    Bugaut, A.2    Huppert, J.L.3    Balasubramanian, S.4
  • 6
    • 0037015078 scopus 로고    scopus 로고
    • Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription
    • Siddiqui-Jain A, Grand CL, Bearss DJ, Hurley LH. Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription. Proc Natl Acad Sci USA 2002; 99: 11593-11598.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 11593-11598
    • Siddiqui-Jain, A.1    Grand, C.L.2    Bearss, D.J.3    Hurley, L.H.4
  • 7
    • 77953211752 scopus 로고    scopus 로고
    • Turning off transcription of the bcl-2 gene by stabilizing the bcl-2 promoter quadruplex with quin-doline derivatives
    • Wang XD, Ou TM, Lu YJ et al. Turning off transcription of the bcl-2 gene by stabilizing the bcl-2 promoter quadruplex with quin-doline derivatives.J Med Chem 2010; 53: 4390-4398.
    • (2010) J Med Chem , vol.53 , pp. 4390-4398
    • Wang, X.D.1    Ou, T.M.2    Lu, Y.J.3
  • 8
    • 79952763614 scopus 로고    scopus 로고
    • Targeting MYC Expression through G-Quadruplexes
    • Brooks TA, Hurley LH. Targeting MYC Expression through G-Quadruplexes. Genes Cancer 2010; 1: 641-649.
    • (2010) Genes Cancer , vol.1 , pp. 641-649
    • Brooks, T.A.1    Hurley, L.H.2
  • 9
    • 77955423929 scopus 로고    scopus 로고
    • Furan based cyclic homo-oligopeptides bind G- quadruplex selectively and repress c-MYC transcription
    • Agarwal T, Roy S, Chakraborty TK, Maiti S. Furan based cyclic homo-oligopeptides bind G- quadruplex selectively and repress c-MYC transcription. Bioorg Med Chem Lett 2010; 20: 4346-4349.
    • (2010) Bioorg Med Chem Lett , vol.20 , pp. 4346-4349
    • Agarwal, T.1    Roy, S.2    Chakraborty, T.K.3    Maiti, S.4
  • 10
    • 39049147645 scopus 로고    scopus 로고
    • A hitchhiker's guide to G-quadruplex ligands
    • Monchaud D, Teulade-Fichou MP. A hitchhiker's guide to G-quadruplex ligands Org Biomol Chem 2008; 6: 627-636.
    • (2008) Org Biomol Chem , vol.6 , pp. 627-636
    • Monchaud, D.1    Teulade-Fichou, M.P.2
  • 11
    • 77957952254 scopus 로고    scopus 로고
    • Macrocyclic G-quadruplex ligands
    • Nielsen MC, Ulven T. Macrocyclic G-quadruplex ligands. Curr Med Chem 2010; 17: 3438-3448.
    • (2010) Curr Med Chem , vol.17 , pp. 3438-3448
    • Nielsen, M.C.1    Ulven, T.2
  • 12
    • 33748701981 scopus 로고    scopus 로고
    • Telomerase inhibition with a novel G-quadruplex-interactive agent, telomestatin: In vitro and in vivo studies in acute leukemia
    • Tauchi T, Shin-ya K, Sashida G et al. Telomerase inhibition with a novel G-quadruplex-interactive agent, telomestatin: in vitro and in vivo studies in acute leukemia. Oncogene 2006; 25: 5719-5725.
    • (2006) Oncogene , vol.25 , pp. 5719-5725
    • Tauchi, T.1    Shin-Ya, K.2    Sashida, G.3
  • 13
    • 65649129343 scopus 로고    scopus 로고
    • Nucleic acid aptamers based on the G-quadruplex structure: Therapeutic and diagnostic potential
    • Gatto B, Palumbo M, Sissi C. Nucleic acid aptamers based on the G-quadruplex structure: therapeutic and diagnostic potential. Curr Med Chem 2009; 16: 1248-1265.
    • (2009) Curr Med Chem , vol.16 , pp. 1248-1265
    • Gatto, B.1    Palumbo, M.2    Sissi, C.3
  • 14
    • 77956524645 scopus 로고    scopus 로고
    • Logic gates and pH sensing devices based on a supramolecular telomere DNA/conjugated polymer system
    • Pu F, Wang C, Hu D et al. Logic gates and pH sensing devices based on a supramolecular telomere DNA/conjugated polymer system. Mol Biosyst 2010; 6: 1928-1932.
    • (2010) Mol Biosyst , vol.6 , pp. 1928-1932
    • Pu, F.1    Wang, C.2    Hu, D.3
  • 15
    • 0026430355 scopus 로고
    • Tetramerization of an RNA oligonu-cleotide containing a GGGG sequence
    • Kim J, Cheong C Moore PB. Tetramerization of an RNA oligonu-cleotide containing a GGGG sequence. Nature 1991; 351: 331-332.
    • (1991) Nature , vol.351 , pp. 331-332
    • Kim, J.1    Cheong, C.2    Moore, P.B.3
  • 16
    • 77449156015 scopus 로고    scopus 로고
    • Probing telomeric G-quadruplex DNA structures in cells with in vitro generated single-chain antibody fragments
    • Schaffitzel C, Postberg J, Paeschke K, Lipps HJ. Probing telomeric G-quadruplex DNA structures in cells with in vitro generated single-chain antibody fragments. Methods Mol Biol 2010; 608: 159-181.
    • (2010) Methods Mol Biol , vol.608 , pp. 159-181
    • Schaffitzel, C.1    Postberg, J.2    Paeschke, K.3    Lipps, H.J.4
  • 17
    • 67651207528 scopus 로고    scopus 로고
    • Differential biophysical behavior of human telomeric RNA and DNA quadruplex
    • Arora A, Maiti S. Differential biophysical behavior of human telomeric RNA and DNA quadruplex. J Phys Chem B 2009; 113: 10515-10520.
    • (2009) J Phys Chem B , vol.113 , pp. 10515-10520
    • Arora, A.1    Maiti, S.2
  • 18
    • 38549087401 scopus 로고    scopus 로고
    • GRSDB2 and GRS_UTRdb: Databases of quadruplex forming G- rich sequences in pre-mRNAs and mRNAs
    • Kikin O, Zappala Z, D'Antonio L, Bagga PS. GRSDB2 and GRS_UTRdb: Databases of quadruplex forming G- rich sequences in pre-mRNAs and mRNAs. Nucleic Acids Res 2008; 36: D141-148.
    • (2008) Nucleic Acids Res , vol.36
    • Kikin, O.1    Zappala, Z.2    D'Antonio, L.3    Bagga, P.S.4
  • 19
    • 45749139174 scopus 로고    scopus 로고
    • Inhibition of translation in living eukaryotic cells by an RNA G-quadruplex motif
    • Arora A, Dutkiewicz M, Scaria V, Hariharan M, Maiti S, Kurreck J. Inhibition of translation in living eukaryotic cells by an RNA G-quadruplex motif. RNA 2008; 14: 1290-1296.
    • (2008) RNA , vol.14 , pp. 1290-1296
    • Arora, A.1    Dutkiewicz, M.2    Scaria, V.3    Hariharan, M.4    Maiti, S.5    Kurreck, J.6
  • 22
    • 33646580058 scopus 로고    scopus 로고
    • Engineering the Quadruplex fold: Nucleo-side conformation determines both folding topology and molecularity in Guanine quadruplexes
    • Tang CF, Shafer R. Engineering the Quadruplex fold: Nucleo-side conformation determines both folding topology and molecularity in Guanine quadruplexes. J Am Chem Soc 2006; 128: 5966-5973.
    • (2006) J Am Chem Soc , vol.128 , pp. 5966-5973
    • Tang, C.F.1    Shafer, R.2
  • 24
    • 3042671689 scopus 로고    scopus 로고
    • Influence of loop size on the stability of intramolecular DNA quadruplexes
    • Risitano A, Fox KR. Influence of loop size on the stability of intramolecular DNA quadruplexes. Nucleic Acids, Res 2004; 32: 2598-2606.
    • (2004) Nucleic Acids, Res , vol.32 , pp. 2598-2606
    • Risitano, A.1    Fox, K.R.2
  • 25
    • 78649850820 scopus 로고    scopus 로고
    • How long is too long? Effects of loop size on G-quadruplex stability
    • Guedin A, Gros J, Alberti P, Mergny JL. How long is too long? Effects of loop size on G-quadruplex stability. Nucleic Acids Res 2010; 38: 7858-7868.
    • (2010) Nucleic Acids Res , vol.38 , pp. 7858-7868
    • Guedin, A.1    Gros, J.2    Alberti, P.3    Mergny, J.L.4
  • 26
    • 27944459311 scopus 로고    scopus 로고
    • Role of loop residues and cations on the formation and stability of dimeric DNA quadruplexes
    • Cevec M, Plavec J. Role of loop residues and cations on the formation and stability of dimeric DNA quadruplexes. Biochemistry 2005; 44: 15238-15246.
    • (2005) Biochemistry , vol.44 , pp. 15238-15246
    • Cevec, M.1    Plavec, J.2
  • 28
    • 80051739988 scopus 로고    scopus 로고
    • A sequence dependent analysis of the loop length dependence of intramolecular G-quadruplex stability and topology
    • Zhang AYQ, Bugaut A, Balasubramanian S. A sequence dependent analysis of the loop length dependence of intramolecular G-quadruplex stability and topology. Biochemistry 2011; 50: 7251-7258.
    • (2011) Biochemistry , vol.50 , pp. 7251-7258
    • Zhang, A.Y.Q.1    Bugaut, A.2    Balasubramanian, S.3
  • 29
    • 0029908928 scopus 로고    scopus 로고
    • The selectivity for K + versus Na in DNA quadruplexes is dominated by relative free en-1 ergies of hydration: A thermodynamic analysis by H NMR
    • Hud NV, Smith FW, Anet FA, Feigon J. The selectivity for K + versus Na in DNA quadruplexes is dominated by relative free en-1 ergies of hydration: A thermodynamic analysis by H NMR. Biochemistry 1996; 35: 15383-15390.
    • (1996) Biochemistry , vol.35 , pp. 15383-15390
    • Hud, N.V.1    Smith, F.W.2    Anet, F.A.3    Feigon, J.4
  • 30
    • 38049030699 scopus 로고    scopus 로고
    • Human telomere, oncogenic promoter and 5-UTR G- quadruplexes: Diverse higher order DNA and RNA targets for cancer therapeutics
    • Patel DJ, Phan AT, Kuryavyi V. Human telomere, oncogenic promoter and 5-UTR G- quadruplexes: diverse higher order DNA and RNA targets for cancer therapeutics. Nucleic Acids Res 2007; 35: 7429-7455.
    • (2007) Nucleic Acids Res , vol.35 , pp. 7429-7455
    • Patel, D.J.1    Phan, A.T.2    Kuryavyi, V.3
  • 31
    • 0037142071 scopus 로고    scopus 로고
    • Crystal structure of parallel quadruplexes from human telomeric DNA
    • Parkinson GN, Lee MPH, Neidle S. Crystal structure of parallel quadruplexes from human telomeric DNA. Nature 2002; 417: 876-880.
    • (2002) Nature , vol.417 , pp. 876-880
    • Parkinson, G.N.1    Lee, M.P.H.2    Neidle, S.3
  • 32
    • 79952379785 scopus 로고    scopus 로고
    • Human telomeric G-quadruplexes undergo dynamic conversion in a molecular crowding environment
    • Xu L, Feng S, Zhou X. Human telomeric G-quadruplexes undergo dynamic conversion in a molecular crowding environment. Chem Comm 2011; 47: 3517-3519.
    • (2011) Chem Comm , vol.47 , pp. 3517-3519
    • Xu, L.1    Feng, S.2    Zhou, X.3
  • 34
    • 69949186768 scopus 로고    scopus 로고
    • A comparison of DNA comparison of DNA and RNA quadruplex structures and stabilities
    • Joachimi A, Benz A, Hartig JS. A comparison of DNA and RNA quadruplex structures and stabilities. Bioorg. Med Chem 2009; 17: 6811-6815.
    • (2009) Bioorg. Med Chem , vol.17 , pp. 6811-6815
    • Joachimi, A.1    Benz, A.2    Hartig, J.S.3
  • 35
    • 77956539976 scopus 로고    scopus 로고
    • A crystallo-graphic and modeling study of human telomeric, RNA (TERRA) quadruplex
    • Collie GW, Haider SM, Neidle S, Parkinson GN. A crystallo-graphic and modeling study of human telomeric, RNA (TERRA) quadruplex. Nucleic Acids Res 2010; 38: 5569-5580.
    • (2010) Nucleic Acids Res , vol.38 , pp. 5569-5580
    • Collie, G.W.1    Haider, S.M.2    Neidle, S.3    Parkinson, G.N.4
  • 36
    • 77952870567 scopus 로고    scopus 로고
    • Monomorphic RNA G- quadruplexes and polymorphic DNA G-quadruplex structures responding to cellular environmental factors
    • Zhang DH, Fujimoto T, Saxena S, Yu HQ, Miyoshi D, Sugimoto N. Monomorphic RNA G- quadruplexes and polymorphic DNA G-quadruplex structures responding to cellular environmental factors. Biochemistry.2010; 49: 4554-4563.
    • (2010) Biochemistry , vol.49 , pp. 4554-4563
    • Zhang, D.H.1    Fujimoto, T.2    Saxena, S.3    Yu, H.Q.4    Miyoshi, D.5    Sugimoto, N.6
  • 37
    • 14844353406 scopus 로고    scopus 로고
    • The effect of chemical modifications on thermal stability of different G- quadruplex forming oligonucleotides
    • Sacca B, Lacroix L, Mergny JL. The effect of chemical modifications on thermal stability of different G- quadruplex forming oligonucleotides. Nucleic Acids Res 2005; 33: 1182-1192.
    • (2005) Nucleic Acids Res , vol.33 , pp. 1182-1192
    • Sacca, B.1    Lacroix, L.2    Mergny, J.L.3
  • 38
    • 33745374520 scopus 로고    scopus 로고
    • Hydration regulates thermodynamics of G-quadruplex formation under molecular crowding conditions
    • Miyoshi D, Karimata H, Sugimoto N. Hydration regulates thermodynamics of G-quadruplex formation under molecular crowding conditions. J Am Chem Soc 2006; 128: 7957-7963.
    • (2006) J Am Chem Soc , vol.128 , pp. 7957-7963
    • Miyoshi, D.1    Karimata, H.2    Sugimoto, N.3
  • 39
    • 0037126694 scopus 로고    scopus 로고
    • Molecular crowding regulates the structural switch of the DNA G- quadruplex
    • Miyoshi D, Nakao A, Sugimoto N. Molecular crowding regulates the structural switch of the DNA G- quadruplex. Biochemistry, 2011; 41: 15017-15024.
    • (2011) Biochemistry , vol.41 , pp. 15017-15024
    • Miyoshi, D.1    Nakao, A.2    Sugimoto, N.3
  • 40
    • 61749086986 scopus 로고    scopus 로고
    • Energetic and hydration contributions of the removal of methyl groups from thymine to form uracil in G-quadruplexes
    • Olsen CM, Marky LA. Energetic and hydration contributions of the removal of methyl groups from thymine to form uracil in G-quadruplexes. J Phys Chem B 2009; 113: 9-11.
    • (2009) J Phys Chem B , vol.113 , pp. 9-11
    • Olsen, C.M.1    Marky, L.A.2
  • 41
    • 0026591751 scopus 로고
    • Crystal structure of four stranded Oxytricha telomeric DNA
    • Kang C, Zhang X, Ratliff R, Moyzis, Rich A. Crystal structure of four stranded Oxytricha telomeric DNA. Nature 1992; 356: 126-131.
    • (1992) Nature , vol.356 , pp. 126-131
    • Kang, C.1    Zhang, X.2    Ratliff, R.3    Moyzis, R.A.4
  • 43
    • 0036912914 scopus 로고    scopus 로고
    • A comparison of the properties and the solution structure for RNA and DNA quadruplexes which contain two GGAGG sequences joined with a tetranucleotide linker
    • Liu H, Kugimiya A, Sakurai T, Katahira M, Uesugi S. A comparison of the properties and the solution structure for RNA and DNA quadruplexes which contain two GGAGG sequences joined with a tetranucleotide linker. Nucleosides Nucleotides Nucleic Acids 2002; 21: 785-801.
    • (2002) Nucleosides Nucleotides Nucleic Acids , vol.21 , pp. 785-801
    • Liu, H.1    Kugimiya, A.2    Sakurai, T.3    Katahira, M.4    Uesugi, S.5
  • 44
    • 77955791968 scopus 로고    scopus 로고
    • Electrospray mass spectrometry of telomeric RNA (TERRA) reveals the formation of stable multimeric G-quadruplex signatures
    • Collie GW, Parkinson GN, Neidle S, Rosu F, Pauw E De, Gabelica V. Electrospray mass spectrometry of telomeric RNA (TERRA) reveals the formation of stable multimeric G-quadruplex signatures. J Am Chem Soc 2010; 132: 9328-9334.
    • (2010) J Am Chem Soc , vol.132 , pp. 9328-9334
    • Collie, G.W.1    Parkinson, G.N.2    Neidle, S.3    Rosu, F.4    de Pauw, E.5    Gabelica, V.6
  • 45
    • 67749143935 scopus 로고    scopus 로고
    • Structure of propeller type parallel stranded G quadruplexes, formed by human telomeric RNA se-+ quences in K solution
    • Martadinata H, Phan AT. Structure of propeller type parallel stranded G quadruplexes, formed by human telomeric RNA se-+ quences in K solution. J Am Chem Soc 2009; 131: 2570-2578.
    • (2009) J Am Chem Soc , vol.131 , pp. 2570-2578
    • Martadinata, H.1    Phan, A.T.2
  • 46
    • 0028556501 scopus 로고
    • A Guanosine quadruplex and two stable hairpins flank a major cleavage site in insulin-like growth factor II mRNA
    • Christiansen J, Kofod M, Nielsen FC. A Guanosine quadruplex and two stable hairpins flank a major cleavage site in insulin-like growth factor II mRNA. Nucleic Acids Res 1994; 22: 5709-5716.
    • (1994) Nucleic Acids Res , vol.22 , pp. 5709-5716
    • Christiansen, J.1    Kofod, M.2    Nielsen, F.C.3
  • 47
    • 34447541999 scopus 로고    scopus 로고
    • RNA quadruplex-based modulation of gene expression
    • Wieland M, Hartig JS. RNA quadruplex-based modulation of gene expression. Chemistry and Biology 2007; 14: 757-763.
    • (2007) Chemistry and Biology , vol.14 , pp. 757-763
    • Wieland, M.1    Hartig, J.S.2
  • 48
    • 77957061503 scopus 로고    scopus 로고
    • The BCL-2 5' untranslated region contains an RNA G-quadruplex forming motif that modulates protein expression
    • Shahid R, Bugaut A, Balasubramanian S. The BCL-2 5' untranslated region contains an RNA G-quadruplex forming motif that modulates protein expression Biochemistry 2010; 49: 8300-8306.
    • (2010) Biochemistry , vol.49 , pp. 8300-8306
    • Shahid, R.1    Bugaut, A.2    Balasubramanian, S.3
  • 50
    • 77956160477 scopus 로고    scopus 로고
    • Occurrence of a quadruplex motif in a unique insert within exon C of the bovine estrogen receptor alpha gene (ESR1)
    • Derecka K, Balkwill GD, Garner TP, Hodgman C Flint AP, Searle MS. Occurrence of a quadruplex motif in a unique insert within exon C of the bovine estrogen receptor alpha gene (ESR1). Biochemistry 2010; 49: 7625-7633.
    • (2010) Biochemistry , vol.49 , pp. 7625-7633
    • Derecka, K.1    Balkwill, G.D.2    Garner, T.P.3    Hodgman, C.4    Flint, A.P.5    Searle, M.S.6
  • 51
    • 77957082956 scopus 로고    scopus 로고
    • A G-quadruplex structure within th e 5'-UTR of TRF2 mRNA represses tran slation in human cells
    • Gomez D, Guédin A, Mergny JL, et al. A G-quadruplex structure within th e 5'-UTR of TRF2 mRNA represses tran slation in human cells. Nucleic Acids Res 2010; 38: 7187-7198.
    • (2010) Nucleic Acids Res , vol.38 , pp. 7187-7198
    • Gomez, D.1    Guédin, A.2    Mergny, J.L.3
  • 52
    • 75549083801 scopus 로고    scopus 로고
    • Investigation of mRNA quadruplex formation in Escherichia coli
    • Wieland M, Hartig JS. Investigation of mRNA quadruplex formation in Escherichia coli. Nature Protocols, 2009; 4: 1632-1640.
    • (2009) Nature Protocols , vol.4 , pp. 1632-1640
    • Wieland, M.1    Hartig, J.S.2
  • 54
    • 67049134254 scopus 로고    scopus 로고
    • An unusually stable G-quadruplex within the 5'-UTR of the MT3 matrix metalloproteinase mRNA represses translation in eukaryotic cells
    • Morris MJ, Basu S. An unusually stable G-quadruplex within the 5'-UTR of the MT3 matrix metalloproteinase mRNA represses translation in eukaryotic cells. Biochemistry 2009; 48: 5313-5319.
    • (2009) Biochemistry , vol.48 , pp. 5313-5319
    • Morris, M.J.1    Basu, S.2
  • 55
    • 73349103817 scopus 로고    scopus 로고
    • Predictable suppression of gene expression by 5'-UTR-based RNA, quadruplexes
    • Halder K, Wieland M, Hartig JS. Predictable suppression of gene expression by 5'-UTR-based RNA, quadruplexes. Nucleic Acids Res 2009; 37: 6811-6817.
    • (2009) Nucleic Acids Res , vol.37 , pp. 6811-6817
    • Halder, K.1    Wieland, M.2    Hartig, J.S.3
  • 56
    • 77957058196 scopus 로고    scopus 로고
    • 5'-UTR G-quadruplex structures acting as translational repressors
    • Beaudoin JD, Perreault JP. 5'-UTR G-quadruplex structures acting as translational repressors. Nucleic Acids, Res 2010; 38: 7022-7036.
    • (2010) Nucleic Acids, Res , vol.38 , pp. 7022-7036
    • Beaudoin, J.D.1    Perreault, J.P.2
  • 57
    • 57049135230 scopus 로고    scopus 로고
    • Position and stability are determining factors for translation repression by an RNA G-quadruplex-forming sequence within the 5' UTR of the NRAS proto-oncogene
    • Kumari S, Bugaut A, Balasubramanian S. Position and stability are determining factors for translation repression by an RNA G-quadruplex-forming sequence within the 5' UTR of the NRAS proto-oncogene. Biochemistry 2008; 47: 12664-12669.
    • (2008) Biochemistry , vol.47 , pp. 12664-12669
    • Kumari, S.1    Bugaut, A.2    Balasubramanian, S.3
  • 58
    • 0141925805 scopus 로고    scopus 로고
    • A single internal ribosome entry site containing a G quartet RNA structure drives fibroblast growth factor 2 gene expression at four alternative translation initiation codons
    • Bonnal S, Schaeffer C, Creancier L, et al. A single internal ribosome entry site containing a G quartet RNA structure drives fibroblast growth factor 2 gene expression at four alternative translation initiation codons. J Biol Chem 2003; 278: 39330-39336.
    • (2003) J Biol Chem , vol.278 , pp. 39330-39336
    • Bonnal, S.1    Schaeffer, C.2    Creancier, L.3
  • 59
    • 78650271083 scopus 로고    scopus 로고
    • An RNA G-quadruplex is essential for cap- independent translation initiation in human VEGF IRES
    • Morris MJ, Negishi Y, Pazsint C, Schonhoft JD, Basu S. An RNA G-quadruplex is essential for cap- independent translation initiation in human VEGF IRES. J Am Chem Soc 2010; 132: 17831-17839.
    • (2010) J Am Chem Soc , vol.132 , pp. 17831-17839
    • Morris, M.J.1    Negishi, Y.2    Pazsint, C.3    Schonhoft, J.D.4    Basu, S.5
  • 60
    • 80052788094 scopus 로고    scopus 로고
    • An RNA G-quadruplex in the 3' UTR of the proto-oncogene PIM1 represses translation
    • [Epub ahead of print]
    • Arora A, Suess B. An RNA G-quadruplex in the 3' UTR of the proto-oncogene PIM1 represses translation. RNA Biol 2011; 8 (5). [Epub ahead of print]
    • (2011) RNA Biol , vol.8 , Issue.5
    • Arora, A.1    Suess, B.2
  • 61
    • 0028867814 scopus 로고
    • The generally expressed hnRNP F is involved in a neural-specific pre-mRNA, splicing event
    • Min H, Chan RC, Black DL. The generally expressed hnRNP F is involved in a neural-specific pre-mRNA, splicing event. Genes Dev 1995; 9: 2659-2671.
    • (1995) Genes Dev , vol.9 , pp. 2659-2671
    • Min, H.1    Chan, R.C.2    Black, D.L.3
  • 62
    • 33644877945 scopus 로고    scopus 로고
    • GRSDB: A database of quadruplex forming G-rich sequences in alternatively processed mammalian pre-mRNA sequences
    • D1
    • Kostadinov R, Malhotra N, Viotti M, Shine R, D'Antonio L, Bagga P. GRSDB: A database of quadruplex forming G-rich sequences in alternatively processed mammalian pre-mRNA sequences. Nucleic Acids Res 2006; 34 (Database issue): D1 19-24.
    • (2006) Nucleic Acids Res , vol.34 , Issue.Database issue , pp. 19-24
    • Kostadinov, R.1    Malhotra, N.2    Viotti, M.3    Shine, R.4    D'Antonio, L.5    Bagga, P.6
  • 63
    • 1242342930 scopus 로고    scopus 로고
    • Telomerase downregulation induced by the G-quadruplex ligand 12459 in A549 cells is mediated by hTERT RNA alternative splicing
    • Gomez D, Lemarteleur T, Lacroix L, Mailliet P, Mergny JL, Riou JF. Telomerase downregulation induced by the G-quadruplex ligand 12459 in A549 cells is mediated by hTERT RNA alternative splicing. Nucleic Acids Res, 2004; 32: 371-379.
    • (2004) Nucleic Acids Res , vol.32 , pp. 371-379
    • Gomez, D.1    Lemarteleur, T.2    Lacroix, L.3    Mailliet, P.4    Mergny, J.L.5    Riou, J.F.6
  • 64
    • 50849092487 scopus 로고    scopus 로고
    • The G-quartet containing FMRP, binding site in FMR1 mRNA is a potent exonic splicing enhancer
    • Didiot MC, Tian Z, Schaeffer C, Subramanian M, Mandel JL, Moine H. The G-quartet containing FMRP, binding site in FMR1 mRNA is a potent exonic splicing enhancer. Nucleic Acids Res 2008; 36: 4902-4912.
    • (2008) Nucleic Acids Res , vol.36 , pp. 4902-4912
    • Didiot, M.C.1    Tian, Z.2    Schaeffer, C.3    Subramanian, M.4    Mandel, J.L.5    Moine, H.6
  • 65
    • 0035801393 scopus 로고    scopus 로고
    • The fragile X mental retardation protein binds specifically to its mRNA via a purine quartet motif
    • Schaeffer C, Bardoni B, Mandel JL, Ehresmann B, Ehresmann C, Moine H. The fragile X mental retardation protein binds specifically to its mRNA via a purine quartet motif. EMBO J 2001; 20: 4803-4813.
    • (2001) EMBO J , vol.20 , pp. 4803-4813
    • Schaeffer, C.1    Bardoni, B.2    Mandel, J.L.3    Ehresmann, B.4    Ehresmann, C.5    Moine, H.6
  • 66
    • 79952299200 scopus 로고    scopus 로고
    • G-quadruplex structures in TP53 intron 3: Role in alternative splicing and in production of p53 mRNA isoforms
    • Marcel V, Tran PLT, Sagne C, et al. G-quadruplex structures in TP53 intron 3: Role in alternative splicing and in production of p53 mRNA isoforms. Carcinogenesis 2011; 32: 271-278.
    • (2011) Carcinogenesis , vol.32 , pp. 271-278
    • Marcel, V.1    Tran, P.L.T.2    Sagne, C.3
  • 67
    • 79551595610 scopus 로고    scopus 로고
    • Essential role for the interaction between hnRNP H/F and a G quadruplex in maintaining p53 pre-mRNA 3'-end processing and function during DNA damage
    • Decorsière A, Cayrel A, Vagner S, Millevoi S. Essential role for the interaction between hnRNP H/F and a G quadruplex in maintaining p53 pre-mRNA 3'-end processing and function during DNA damage. Genes Dev 2011; 25: 220-225.
    • (2011) Genes Dev , vol.25 , pp. 220-225
    • Decorsière, A.1    Cayrel, A.2    Vagner, S.3    Millevoi, S.4
  • 68
    • 77958007950 scopus 로고    scopus 로고
    • G-quadruplex structures in RNA, stimulate mitochondria transcription termination and primer formation
    • Wanrooij PH, Uhler JP, Simonsson T, Falkenberg M, Gustafsson CM. G-quadruplex structures in RNA, stimulate mitochondria transcription termination and primer formation. Proc Natl Acad Sci USA 2010; 107: 16072-16077.
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 16072-16077
    • Wanrooij, P.H.1    Uhler, J.P.2    Simonsson, T.3    Falkenberg, M.4    Gustafsson, C.M.5
  • 69
    • 0035900649 scopus 로고    scopus 로고
    • Fragile X mental retardation protein targets G, quartet mRNAs important for neuronal function
    • Darnell JC, Jensen KB, Jin P, Brown V, Warren ST, Darnell RB. Fragile X mental retardation protein targets G, quartet mRNAs important for neuronal function. Cell 2001; 107: 489-499.
    • (2001) Cell , vol.107 , pp. 489-499
    • Darnell, J.C.1    Jensen, K.B.2    Jin, P.3    Brown, V.4    Warren, S.T.5    Darnell, R.B.6
  • 70
    • 18044379515 scopus 로고    scopus 로고
    • Microarray identification of FMRP associated brain mRNAs and altered mRNA, translational profiles in fragile X syndrome
    • Brown V, Jin P, Ceman S, et al. Microarray identification of FMRP associated brain mRNAs and altered mRNA, translational profiles in fragile X syndrome. Cell 2001; 107: 477-487.
    • (2001) Cell , vol.107 , pp. 477-487
    • Brown, V.1    Jin, P.2    Ceman, S.3
  • 71
    • 6344276563 scopus 로고    scopus 로고
    • The fragile X protein controls microtubule- associated protein 1B translation and microtubule stability in brain neuron development
    • Lu R, Wang H, Liang Z, O'Donnell WT, Warren ST Feng Y. The fragile X protein controls microtubule- associated protein 1B translation and microtubule stability in brain neuron development, Proc Natl Acad Sci USA, 2004; 104: 15201-15206.
    • (2004) Proc Natl Acad Sci USA , vol.104 , pp. 15201-15206
    • Lu, R.1    Wang, H.2    Liang, Z.3    O'Donnell, W.T.4    Warren, S.T.5    Feng, Y.6
  • 72
    • 20144365993 scopus 로고    scopus 로고
    • FMRP interferes with the Rac1 pathway and controls actin cytoskeleton dynamics in murine fibroblasts
    • Castets M, Schaeffer C, Bechara E, FMRP interferes with the Rac1 pathway and controls actin cytoskeleton dynamics in murine fibroblasts. Hum Mol Genet 2005; 14: 835-844.
    • (2005) Hum Mol Genet , vol.14 , pp. 835-844
    • Castets, M.1    Schaeffer, C.2    Bechara, E.3
  • 73
    • 0035801393 scopus 로고    scopus 로고
    • The fragile X mental retardation protein binds specifically to its mRNA via a purine quartet motif
    • Schaeffer C, Bardoni B, Mandel JL, Ehresmann B, Ehresmann C, Moine H. The fragile X mental retardation protein binds specifically to its mRNA via a purine quartet motif. EMBO J 2001; 20: 4803-4813.
    • (2001) EMBO J , vol.20 , pp. 4803-4813
    • Schaeffer, C.1    Bardoni, B.2    Mandel, J.L.3    Ehresmann, B.4    Ehresmann, C.5    Moine, H.6
  • 74
    • 33947195786 scopus 로고    scopus 로고
    • FMRP mediates mGluR5-dependent translation of amyloid precursor protein
    • Westmark CJ, Malter JS. FMRP mediates mGluR5-dependent translation of amyloid precursor protein. Plos, Biol 2007; 5: 629-639.
    • (2007) Plos, Biol , vol.5 , pp. 629-639
    • Westmark, C.J.1    Malter, J.S.2
  • 75
    • 34548726219 scopus 로고    scopus 로고
    • Interactions of the G-quartet forming semaphorin 3F RNA with the RGG box domain of the fragile X protein family
    • Menon L, Mihailescu MR. Interactions of the G-quartet forming semaphorin 3F RNA with the RGG box domain of the fragile X protein family. Nucleic Acids Res 2007; 35: 5379-5392.
    • (2007) Nucleic Acids Res , vol.35 , pp. 5379-5392
    • Menon, L.1    Mihailescu, M.R.2
  • 76
    • 0345492360 scopus 로고    scopus 로고
    • The fragile X mental retardation protein is required for type-I-metabotropic glutamate receptor-dependent translation of PSD-95
    • Todd PK, Mack KJ, Malter JS. The fragile X mental retardation protein is required for type-I-metabotropic glutamate receptor-dependent translation of PSD-95. Proc Natl Acad Sci USA 2003; 100: 14374-14378.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 14374-14378
    • Todd, P.K.1    Mack, K.J.2    Malter, J.S.3
  • 77
    • 77954657503 scopus 로고    scopus 로고
    • The role of G-Quadruplexes in RNA metabolism: Involvement of FMRP and FMR2P
    • Melko M, Bardoni B. The role of G-Quadruplexes in RNA metabolism: Involvement of FMRP and FMR2P. Biochimie 2010; 92: 919-926.
    • (2010) Biochimie , vol.92 , pp. 919-926
    • Melko, M.1    Bardoni, B.2
  • 79
    • 14344275144 scopus 로고    scopus 로고
    • Biological aspects of DNA/RNA quadru- plexes
    • Shafer RH, Smirnov I. Biological aspects of DNA/RNA quadru- plexes. Biopolymers 2001; 56: 209-227.
    • (2001) Biopolymers , vol.56 , pp. 209-227
    • Shafer, R.H.1    Smirnov, I.2
  • 80
    • 0030468992 scopus 로고    scopus 로고
    • Thermally induced DNA.RNA hybrid to G-quadruplex transitions: Possible implications for telomere synthesis by telomerase
    • Salazar M, Thompson BD, Kerwin SM, Hurley LH. Thermally induced DNA.RNA hybrid to G-quadruplex transitions: Possible implications for telomere synthesis by telomerase. Biochemistry 1996; 35: 16110-16115.
    • (1996) Biochemistry , vol.35 , pp. 16110-16115
    • Salazar, M.1    Thompson, B.D.2    Kerwin, S.M.3    Hurley, L.H.4
  • 81
    • 79955039251 scopus 로고    scopus 로고
    • Telomere protein complexes and interactions with telomerase in telomere maintenance
    • Pinto AR, Li H, Nicholls C, Liu JP. Telomere protein complexes and interactions with telomerase in telomere maintenance. Front Biosci 2011; 16: 187-207.
    • (2011) Front Biosci , vol.16 , pp. 187-207
    • Pinto, A.R.1    Li, H.2    Nicholls, C.3    Liu, J.P.4
  • 82
    • 37349043972 scopus 로고    scopus 로고
    • Telomeric repeat containing RNA and RNA surveillance factors at mammalian chromosome ends
    • Azzalin CM, Reichenbach P, Khoriauli L, Giulotto E, Lingner J. Telomeric repeat containing RNA and RNA surveillance factors at mammalian chromosome ends. Science 2007; 318: 798-801.
    • (2007) Science , vol.318 , pp. 798-801
    • Azzalin, C.M.1    Reichenbach, P.2    Khoriauli, L.3    Giulotto, E.4    Lingner, J.5
  • 83
    • 69849104275 scopus 로고    scopus 로고
    • TERRA: Telomeric repeat-containing RNA
    • Luke B, Lingner J. TERRA: Telomeric repeat-containing RNA. EMBO J 2009; 28: 2503-2510.
    • (2009) EMBO J , vol.28 , pp. 2503-2510
    • Luke, B.1    Lingner, J.2
  • 84
    • 77957032993 scopus 로고    scopus 로고
    • Telomeric repeat-containing RNA structure in living cells
    • Xu Y, Suzuki Y, Ito K, Komiyama M. Telomeric repeat-containing RNA structure in living cells. Proc Nat Acad Sci USA 2010; 107: 14579-14584.
    • (2010) Proc Nat Acad Sci USA , vol.107 , pp. 14579-14584
    • Xu, Y.1    Suzuki, Y.2    Ito, K.3    Komiyama, M.4
  • 85
    • 78650153788 scopus 로고    scopus 로고
    • TERRA transcripts are bound by a complex array of RNA-binding proteins
    • doi:10.1038/ncomms1032
    • López de Silanes I, Stagno d'Alcontres M, Blasco MA. TERRA transcripts are bound by a complex array of RNA-binding proteins. Nat Commun 2010; 1:33. doi:10.1038/ncomms1032.
    • (2010) Nat Commun , vol.1 , pp. 33
    • López de Silanes, I.1    Stagno d'Alcontres, M.2    Blasco, M.A.3
  • 86
    • 68949198783 scopus 로고    scopus 로고
    • TERRA RNA binding to TRF2 facilitates heterochromatin for mation and ORC recruitment at telomeres
    • Deng Z, Norseen J, Wiedmer A, Riethman H, Lieberman PM. TERRA RNA binding to TRF2 facilitates heterochromatin for mation and ORC recruitment at telomeres. Mol Cell 2009; 35: 403-415.
    • (2009) Mol Cell , vol.35 , pp. 403-415
    • Deng, Z.1    Norseen, J.2    Wiedmer, A.3    Riethman, H.4    Lieberman, P.M.5
  • 88
    • 11344278689 scopus 로고    scopus 로고
    • RNA aptamers selected against the receptor activator of NF-kappaB acquire general affinity to proteins of the tumor necrosis factor receptor family
    • Mori T, Oguro A, Ohtsu T, Nakamura Y. RNA aptamers selected against the receptor activator of NF-kappaB acquire general affinity to proteins of the tumor necrosis factor receptor family. Nucleic Acids Res 2004; 32: 6120-6128.
    • (2004) Nucleic Acids Res , vol.32 , pp. 6120-6128
    • Mori, T.1    Oguro, A.2    Ohtsu, T.3    Nakamura, Y.4
  • 89
    • 0030843497 scopus 로고    scopus 로고
    • RNA aptamers specifically interact with the prion protein PrP
    • Weiss S, Proske D, Neumann M, et al. RNA aptamers specifically interact with the prion protein PrP. J Virol 1997; 71; 8790-8797.
    • (1997) J Virol , vol.71 , pp. 8790-8797
    • Weiss, S.1    Proske, D.2    Neumann, M.3
  • 92
    • 0029138009 scopus 로고
    • RNA aptamers that bind flavin and nicotinamide redox cofactors
    • Lauhon CT, Szostak JW. RNA aptamers that bind flavin and nicotinamide redox cofactors. J Am Chem Soc 1995; 117: 1246-1257.
    • (1995) J Am Chem Soc , vol.117 , pp. 1246-1257
    • Lauhon, C.T.1    Szostak, J.W.2
  • 93
    • 34147108104 scopus 로고    scopus 로고
    • In vitro selection and characterization of RNA aptamers binding thyroxine hormone
    • Levesque D, Beaudoin JD, Roy S, Perreault JP. In vitro selection and characterization of RNA aptamers binding thyroxine hormone. Biochem J 2007; 403: 129-138.
    • (2007) Biochem J , vol.403 , pp. 129-138
    • Levesque, D.1    Beaudoin, J.D.2    Roy, S.3    Perreault, J.P.4
  • 96
    • 59149086234 scopus 로고    scopus 로고
    • A DNA nanomachine induced by single-walled carbon nanotubes on gold surface
    • Zhao C, Song Y, Ren J, Qu X. A DNA nanomachine induced by single-walled carbon nanotubes on gold surface. Biomaterials. 2009; 30: 1739-1745.
    • (2009) Biomaterials , vol.30 , pp. 1739-1745
    • Zhao, C.1    Song, Y.2    Ren, J.3    Qu, X.4
  • 97
    • 70350277982 scopus 로고    scopus 로고
    • Potassium-lead-switched G-quadruplexes: A new class of DNA logic gates
    • Li T, Wang E, Dong S. Potassium-lead-switched G-quadruplexes: A new class of DNA logic gates. J Am Chem, Soc 2009; 131: 15082-15083.
    • (2009) J Am Chem, Soc , vol.131 , pp. 15082-15083
    • Li, T.1    Wang, E.2    Dong, S.3
  • 98
    • 14344275144 scopus 로고    scopus 로고
    • Biological aspects of DNA/RNA quadru-plexes
    • Shafer RH, Smirnov I. Biological aspects of DNA/RNA quadru-plexes. Biopolymers 2000-2001; 56: 209-227.
    • (2000) Biopolymers , vol.56 , pp. 209-227
    • Shafer, R.H.1    Smirnov, I.2
  • 99
    • 33748052721 scopus 로고    scopus 로고
    • Quadruplex-based molecular beacons as tunable DNA probes
    • Bourdoncle A, Estévez Torres A, Gosse C et al. Quadruplex-based molecular beacons as tunable DNA probes. J Am Chem Soc 2006; 128: 11094-11105.
    • (2006) J Am Chem Soc , vol.128 , pp. 11094-11105
    • Bourdoncle, A.1    Estévez Torres, A.2    Gosse, C.3
  • 100
    • 66249108942 scopus 로고    scopus 로고
    • Structural studies of an RNA aptamer containing GGA repeats under ionic conditions using microchip electrophoresis, circular dichroism, and 1D-NMR
    • Nishikawa F, Murakami K, Matsugami A, Katahira M, Nishikawa S. Structural studies of an RNA aptamer containing GGA repeats under ionic conditions using microchip electrophoresis, circular dichroism, and 1D-NMR. Oligonucleotides 2009; 19: 179-190.
    • (2009) Oligonucleotides , vol.19 , pp. 179-190
    • Nishikawa, F.1    Murakami, K.2    Matsugami, A.3    Katahira, M.4    Nishikawa, S.5


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