-
1
-
-
33748631825
-
Assembly-line enzymology for polyketide and nonribosomal peptide antibiotics: Logic machinery, and mechanisms
-
DOI 10.1021/cr0503097
-
Fischbach, M. A. and Walsh, C. T. (2006) Assembly-line enzymology for polyketide and nonribosomal peptide antibiotics: Logic, machinery, and mechanisms Chem. Rev. 106, 3468-3496 (Pubitemid 44376945)
-
(2006)
Chemical Reviews
, vol.106
, Issue.8
, pp. 3468-3496
-
-
Fischbach, M.A.1
Walsh, C.T.2
-
2
-
-
0033955033
-
Holo-(acyl carrier protein) synthase and phosphopantetheinyl transfer in Escherichia coli
-
DOI 10.1074/jbc.275.2.959
-
Flugel, R. S., Hwangbo, Y., Lambalot, R. H., Cronan, J. E., Jr., and Walsh, C. T. (2000) Holo-(acyl carrier protein) synthase and phosphopantetheinyl transfer in Escherichia coli J. Biol. Chem. 275, 959-968 (Pubitemid 30051141)
-
(2000)
Journal of Biological Chemistry
, vol.275
, Issue.2
, pp. 959-968
-
-
Flugel, R.S.1
Hwangbo, Y.2
Lambalot, R.H.3
Cronan Jr., J.E.4
Walsh, C.T.5
-
3
-
-
68149132445
-
Structural insights into nonribosomal peptide enzymatic assembly lines
-
Koglin, A. and Walsh, C. T. (2009) Structural insights into nonribosomal peptide enzymatic assembly lines Nat. Prod. Rep. 26, 987-1000
-
(2009)
Nat. Prod. Rep.
, vol.26
, pp. 987-1000
-
-
Koglin, A.1
Walsh, C.T.2
-
4
-
-
57749097690
-
Crystal structure of DltA. Implications for the reaction mechanism of non-ribosomal peptide synthetase adenylation domains
-
Yonus, H., Neumann, P., Zimmermann, S., May, J. J., Marahiel, M. A., and Stubbs, M. T. (2008) Crystal structure of DltA. Implications for the reaction mechanism of non-ribosomal peptide synthetase adenylation domains J. Biol. Chem. 283, 32484-32491
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 32484-32491
-
-
Yonus, H.1
Neumann, P.2
Zimmermann, S.3
May, J.J.4
Marahiel, M.A.5
Stubbs, M.T.6
-
5
-
-
0030756031
-
Structural basis for the activation of phenylalanine in the non-ribosomal biosynthesis of gramicidin S
-
DOI 10.1093/emboj/16.14.4174
-
Conti, E., Stachelhaus, T., Marahiel, M. A., and Brick, P. (1997) Structural basis for the activation of phenylalanine in the non-ribosomal biosynthesis of gramicidin S EMBO J. 16, 4174-4183 (Pubitemid 27298170)
-
(1997)
EMBO Journal
, vol.16
, Issue.14
, pp. 4174-4183
-
-
Conti, E.1
Stachelhaus, T.2
Marahiel, M.A.3
Brick, P.4
-
6
-
-
78049279393
-
Biochemical and structural characterization of bisubstrate inhibitors of BasE, the self-standing nonribosomal peptide synthetase adenylate-forming enzyme of acinetobactin synthesis
-
Drake, E. J., Duckworth, B. P., Neres, J., Aldrich, C. C., and Gulick, A. M. (2010) Biochemical and structural characterization of bisubstrate inhibitors of BasE, the self-standing nonribosomal peptide synthetase adenylate-forming enzyme of acinetobactin synthesis Biochemistry 49, 9292-9305
-
(2010)
Biochemistry
, vol.49
, pp. 9292-9305
-
-
Drake, E.J.1
Duckworth, B.P.2
Neres, J.3
Aldrich, C.C.4
Gulick, A.M.5
-
7
-
-
0037126024
-
Crystal structure of DhbE, an archetype for aryl acid activating domains of modular nonribosomal peptide synthetases
-
May, J. J., Kessler, N., Marahiel, M. A., and Stubbs, M. T. (2002) Crystal structure of DhbE, an archetype for aryl acid activating domains of modular nonribosomal peptide synthetases Proc. Natl. Acad. Sci. U.S.A. 99, 12120-12125
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 12120-12125
-
-
May, J.J.1
Kessler, N.2
Marahiel, M.A.3
Stubbs, M.T.4
-
8
-
-
0036295033
-
The structure of VibH represents nonribosomal peptide synthetase condensation, cyclization and epimerization domains
-
DOI 10.1038/nsb810
-
Keating, T. A., Marshall, C. G., Walsh, C. T., and Keating, A. E. (2002) The structure of VibH represents nonribosomal peptide synthetase condensation, cyclization and epimerization domains Nat. Struct. Biol. 9, 522-526 (Pubitemid 34693807)
-
(2002)
Nature Structural Biology
, vol.9
, Issue.7
, pp. 522-526
-
-
Keating, T.A.1
Marshall, C.G.2
Walsh, C.T.3
Keating, A.E.4
-
9
-
-
33645807617
-
Conformational switches modulate protein interactions in peptide antibiotic synthetases
-
Koglin, A., Mofid, M. R., Lohr, F., Schafer, B., Rogov, V. V., Blum, M. M., Mittag, T., Marahiel, M. A., Bernhard, F., and Dotsch, V. (2006) Conformational switches modulate protein interactions in peptide antibiotic synthetases Science 312, 273-276
-
(2006)
Science
, vol.312
, pp. 273-276
-
-
Koglin, A.1
Mofid, M.R.2
Lohr, F.3
Schafer, B.4
Rogov, V.V.5
Blum, M.M.6
Mittag, T.7
Marahiel, M.A.8
Bernhard, F.9
Dotsch, V.10
-
10
-
-
64149117037
-
Structure and functional analysis of RifR, the type II thioesterase from the rifamycin biosynthetic pathway
-
Claxton, H. B., Akey, D. L., Silver, M. K., Admiraal, S. J., and Smith, J. L. (2009) Structure and functional analysis of RifR, the type II thioesterase from the rifamycin biosynthetic pathway J. Biol. Chem. 284, 5021-5029
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 5021-5029
-
-
Claxton, H.B.1
Akey, D.L.2
Silver, M.K.3
Admiraal, S.J.4
Smith, J.L.5
-
11
-
-
84857523988
-
Structural and functional investigation of intermolecular interaction between NRPS adenylation and carrier protein domains
-
Sundlov, J. A., Shi, C., Wilson, D. J., Aldrich, C. C., and Gulick, A. M. (2012) Structural and functional investigation of intermolecular interaction between NRPS adenylation and carrier protein domains Chem. Biol. 19, 188-198
-
(2012)
Chem. Biol.
, vol.19
, pp. 188-198
-
-
Sundlov, J.A.1
Shi, C.2
Wilson, D.J.3
Aldrich, C.C.4
Gulick, A.M.5
-
12
-
-
49649129083
-
Dynamic thiolation-thioesterase structure of a non-ribosomal peptide synthetase
-
Frueh, D. P., Arthanari, H., Koglin, A., Vosburg, D. A., Bennett, A. E., Walsh, C. T., and Wagner, G. (2008) Dynamic thiolation-thioesterase structure of a non-ribosomal peptide synthetase Nature 454, 903-906
-
(2008)
Nature
, vol.454
, pp. 903-906
-
-
Frueh, D.P.1
Arthanari, H.2
Koglin, A.3
Vosburg, D.A.4
Bennett, A.E.5
Walsh, C.T.6
Wagner, G.7
-
13
-
-
82255181183
-
Structural basis for phosphopantetheinyl carrier domain interactions in the terminal module of nonribosomal peptide synthetases
-
Liu, Y., Zheng, T., and Bruner, S. D. (2011) Structural basis for phosphopantetheinyl carrier domain interactions in the terminal module of nonribosomal peptide synthetases Chem. Biol. 18, 1482-1488
-
(2011)
Chem. Biol.
, vol.18
, pp. 1482-1488
-
-
Liu, Y.1
Zheng, T.2
Bruner, S.D.3
-
14
-
-
48749083335
-
Crystal structure of the termination module of a nonribosomal peptide synthetase
-
Tanovic, A., Samel, S. A., Essen, L. O., and Marahiel, M. A. (2008) Crystal structure of the termination module of a nonribosomal peptide synthetase Science 321, 659-663
-
(2008)
Science
, vol.321
, pp. 659-663
-
-
Tanovic, A.1
Samel, S.A.2
Essen, L.O.3
Marahiel, M.A.4
-
15
-
-
70350140439
-
Conformational dynamics in the Acyl-CoA synthetases, adenylation domains of non-ribosomal peptide synthetases, and firefly luciferase
-
Gulick, A. M. (2009) Conformational dynamics in the Acyl-CoA synthetases, adenylation domains of non-ribosomal peptide synthetases, and firefly luciferase ACS Chem. Biol. 4, 811-827
-
(2009)
ACS Chem. Biol.
, vol.4
, pp. 811-827
-
-
Gulick, A.M.1
-
16
-
-
48649093119
-
Structural characterization of a 140° domain movement in the two-step reaction catalyzed by 4-chlorobenzoate:CoA ligase
-
Reger, A. S., Wu, R., Dunaway-Mariano, D., and Gulick, A. M. (2008) Structural characterization of a 140° domain movement in the two-step reaction catalyzed by 4-chlorobenzoate:CoA ligase Biochemistry 47, 8016-8025
-
(2008)
Biochemistry
, vol.47
, pp. 8016-8025
-
-
Reger, A.S.1
Wu, R.2
Dunaway-Mariano, D.3
Gulick, A.M.4
-
17
-
-
48649108004
-
Mechanism of 4-chlorobenzoate:coenzyme a ligase catalysis
-
Wu, R., Cao, J., Lu, X., Reger, A. S., Gulick, A. M., and Dunaway-Mariano, D. (2008) Mechanism of 4-chlorobenzoate:coenzyme a ligase catalysis Biochemistry 47, 8026-8039
-
(2008)
Biochemistry
, vol.47
, pp. 8026-8039
-
-
Wu, R.1
Cao, J.2
Lu, X.3
Reger, A.S.4
Gulick, A.M.5
Dunaway-Mariano, D.6
-
18
-
-
66049133308
-
The mechanism of domain alternation in the acyl-adenylate forming ligase superfamily member 4-chlorobenzoate:coenzyme A ligase
-
Wu, R., Reger, A. S., Lu, X., Gulick, A. M., and Dunaway-Mariano, D. (2009) The mechanism of domain alternation in the acyl-adenylate forming ligase superfamily member 4-chlorobenzoate:coenzyme A ligase Biochemistry 48, 4115-4125
-
(2009)
Biochemistry
, vol.48
, pp. 4115-4125
-
-
Wu, R.1
Reger, A.S.2
Lu, X.3
Gulick, A.M.4
Dunaway-Mariano, D.5
-
19
-
-
34249872993
-
Biochemical and crystallographic analysis of substrate binding and conformational changes in acetyl-CoA synthetase
-
DOI 10.1021/bi6026506
-
Reger, A. S., Carney, J. M., and Gulick, A. M. (2007) Biochemical and crystallographic analysis of substrate binding and conformational changes in acetyl-CoA synthetase Biochemistry 46, 6536-6546 (Pubitemid 46870119)
-
(2007)
Biochemistry
, vol.46
, Issue.22
, pp. 6536-6546
-
-
Reger, A.S.1
Carney, J.M.2
Gulick, A.M.3
-
20
-
-
0024420904
-
Subcloning, expression, and purification of the enterobactin biosynthetic enzyme 2,3-dihydroxybenzoate-AMP ligase: Demonstration of enzyme-bound (2,3-dihydroxybenzoyl)adenylate product
-
Rusnak, F., Faraci, W. S., and Walsh, C. T. (1989) Subcloning, expression, and purification of the enterobactin biosynthetic enzyme 2,3-dihydroxybenzoate-AMP ligase: Demonstration of enzyme-bound (2,3-dihydroxybenzoyl)adenylate product Biochemistry 28, 6827-6835 (Pubitemid 19219869)
-
(1989)
Biochemistry
, vol.28
, Issue.17
, pp. 6827-6835
-
-
Rusnak, F.1
Faraci, W.S.2
Walsh, C.T.3
-
21
-
-
33646025234
-
Structure of the EntB multidomain nonribosomal peptide synthetase and functional analysis of its interaction with the EntE adenylation domain
-
Drake, E. J., Nicolai, D. A., and Gulick, A. M. (2006) Structure of the EntB multidomain nonribosomal peptide synthetase and functional analysis of its interaction with the EntE adenylation domain Chem. Biol. 13, 409-419
-
(2006)
Chem. Biol.
, vol.13
, pp. 409-419
-
-
Drake, E.J.1
Nicolai, D.A.2
Gulick, A.M.3
-
22
-
-
77249138804
-
Active site remodelling accompanies thioester bond formation in the SUMO E1
-
Olsen, S. K., Capili, A. D., Lu, X., Tan, D. S., and Lima, C. D. (2010) Active site remodelling accompanies thioester bond formation in the SUMO E1 Nature 463, 906-912
-
(2010)
Nature
, vol.463
, pp. 906-912
-
-
Olsen, S.K.1
Capili, A.D.2
Lu, X.3
Tan, D.S.4
Lima, C.D.5
-
23
-
-
84155174673
-
Stable analogues of OSB-AMP: Potent inhibitors of MenE, the o-succinylbenzoate-CoA synthetase from bacterial menaquinone biosynthesis
-
Lu, X., Zhou, R., Sharma, I., Li, X., Kumar, G., Swaminathan, S., Tonge, P. J., and Tan, D. S. (2012) Stable analogues of OSB-AMP: Potent inhibitors of MenE, the o-succinylbenzoate-CoA synthetase from bacterial menaquinone biosynthesis ChemBioChem 13, 129-136
-
(2012)
ChemBioChem
, vol.13
, pp. 129-136
-
-
Lu, X.1
Zhou, R.2
Sharma, I.3
Li, X.4
Kumar, G.5
Swaminathan, S.6
Tonge, P.J.7
Tan, D.S.8
-
24
-
-
53849119555
-
Ins and outs of major facilitator superfamily antiporters
-
Law, C. J., Maloney, P. C., and Wang, D. N. (2008) Ins and outs of major facilitator superfamily antiporters Annu. Rev. Microbiol. 62, 289-305
-
(2008)
Annu. Rev. Microbiol.
, vol.62
, pp. 289-305
-
-
Law, C.J.1
Maloney, P.C.2
Wang, D.N.3
-
25
-
-
0035711194
-
Tobacco etch virus protease: Mechanism of autolysis and rational design of stable mutants with wild-type catalytic proficiency
-
Kapust, R. B., Tozser, J., Fox, J. D., Anderson, D. E., Cherry, S., Copeland, T. D., and Waugh, D. S. (2001) Tobacco etch virus protease: mechanism of autolysis and rational design of stable mutants with wild-type catalytic proficiency Protein Eng. 14, 993-1000 (Pubitemid 34137240)
-
(2001)
Protein Engineering
, vol.14
, Issue.12
, pp. 993-1000
-
-
Kapust, R.B.1
Tozser, J.2
Fox, J.D.3
Anderson, D.E.4
Cherry, S.5
Copeland, T.D.6
Waugh, D.S.7
-
26
-
-
4344584625
-
An improved protocol for rapid freezing of protein samples for long-term storage
-
Deng, J., Davies, D. R., Wisedchaisri, G., Wu, M., Hol, W. G., and Mehlin, C. (2004) An improved protocol for rapid freezing of protein samples for long-term storage Acta Crystallogr. D60, 203-204
-
(2004)
Acta Crystallogr.
, vol.60
, pp. 203-204
-
-
Deng, J.1
Davies, D.R.2
Wisedchaisri, G.3
Wu, M.4
Hol, W.G.5
Mehlin, C.6
-
27
-
-
0030294470
-
A new enzyme superfamily - The phosphopantetheinyl transferases
-
Lambalot, R. H., Gehring, A. M., Flugel, R. S., Zuber, P., LaCelle, M., Marahiel, M. A., Reid, R., Khosla, C., and Walsh, C. T. (1996) A new enzyme superfamily: The phosphopantetheinyl transferases Chem. Biol. 3, 923-936 (Pubitemid 27017091)
-
(1996)
Chemistry and Biology
, vol.3
, Issue.11
, pp. 923-936
-
-
Lambalot, R.H.1
Gehring, A.M.2
Flugel, R.S.3
Zuber, P.4
LaCelle, M.5
Marahiel, M.A.6
Reid, R.7
Khosla, C.8
Walsh, C.T.9
-
28
-
-
0035813125
-
4′-Phosphopantetheine transfer in primary and secondary metabolism of Bacillus subtilis
-
Mootz, H. D., Finking, R., and Marahiel, M. A. (2001) 4′-Phosphopantetheine transfer in primary and secondary metabolism of Bacillus subtilis J. Biol. Chem. 276, 37289-37298
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 37289-37298
-
-
Mootz, H.D.1
Finking, R.2
Marahiel, M.A.3
-
29
-
-
0026631359
-
Ancestry of the 4-chlorobenzoate dehalogenase: Analysis of amino acid sequence identities among families of acyl:adenyl ligases, enoyl-CoA hydratases/isomerases, and acyl-CoA thioesterases
-
Babbitt, P. C., Kenyon, G. L., Martin, B. M., Charest, H., Slyvestre, M., Scholten, J. D., Chang, K. H., Liang, P. H., and Dunaway-Mariano, D. (1992) Ancestry of the 4-chlorobenzoate dehalogenase: Analysis of amino acid sequence identities among families of acyl:adenyl ligases, enoyl-CoA hydratases/ isomerases, and acyl-CoA thioesterases Biochemistry 31, 5594-5604
-
(1992)
Biochemistry
, vol.31
, pp. 5594-5604
-
-
Babbitt, P.C.1
Kenyon, G.L.2
Martin, B.M.3
Charest, H.4
Slyvestre, M.5
Scholten, J.D.6
Chang, K.H.7
Liang, P.H.8
Dunaway-Mariano, D.9
-
30
-
-
34547116228
-
The 1.8 A crystal structure of PA2412, an MbtH-like protein from the pyoverdine cluster of Pseudomonas aeruginosa
-
DOI 10.1074/jbc.M611833200
-
Drake, E. J., Cao, J., Qu, J., Shah, M. B., Straubinger, R. M., and Gulick, A. M. (2007) The 1.8 Å crystal structure of PA2412, an MbtH-like protein from the pyoverdine cluster of Pseudomonas aeruginosa J. Biol. Chem. 282, 20425-20434 (Pubitemid 47099995)
-
(2007)
Journal of Biological Chemistry
, vol.282
, Issue.28
, pp. 20425-20434
-
-
Drake, E.J.1
Cao, J.2
Qu, J.3
Shah, M.B.4
Straubinger, R.M.5
Gulick, A.M.6
-
31
-
-
0032502031
-
Stoichiometry and specificity of in vitro phosphopantetheinylation and aminoacylation of the valine-activating module of surfactin synthetase
-
DOI 10.1021/bi9719859
-
Weinreb, P. H., Quadri, L. E., Walsh, C. T., and Zuber, P. (1998) Stoichiometry and specificity of in vitro phosphopantetheinylation and aminoacylation of the valine-activating module of surfactin synthetase Biochemistry 37, 1575-1584 (Pubitemid 28093673)
-
(1998)
Biochemistry
, vol.37
, Issue.6
, pp. 1575-1584
-
-
Weinreb, P.H.1
Quadri, L.E.N.2
Walsh, C.T.3
Zuber, P.4
-
32
-
-
56649122007
-
New paradigm for macromolecular crystallography experiments at SSRL: Automated crystal screening and remote data collection
-
Soltis, S. M., Cohen, A. E., Deacon, A., Eriksson, T., Gonzalez, A., McPhillips, S., Chui, H., Dunten, P., Hollenbeck, M., Mathews, I., Miller, M., Moorhead, P., Phizackerley, R. P., Smith, C., Song, J., van dem Bedem, H., Ellis, P., Kuhn, P., McPhillips, T., Sauter, N., Sharp, K., Tsyba, I., and Wolf, G. (2008) New paradigm for macromolecular crystallography experiments at SSRL: Automated crystal screening and remote data collection Acta Crystallogr. D64, 1210-1221
-
(2008)
Acta Crystallogr.
, vol.64
, pp. 1210-1221
-
-
Soltis, S.M.1
Cohen, A.E.2
Deacon, A.3
Eriksson, T.4
Gonzalez, A.5
McPhillips, S.6
Chui, H.7
Dunten, P.8
Hollenbeck, M.9
Mathews, I.10
Miller, M.11
Moorhead, P.12
Phizackerley, R.P.13
Smith, C.14
Song, J.15
Van Dem Bedem, H.16
Ellis, P.17
Kuhn, P.18
McPhillips, T.19
Sauter, N.20
Sharp, K.21
Tsyba, I.22
Wolf, G.23
more..
-
33
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
DOI 10.1016/S0076-6879(97)76066-X
-
Otwinowski, Z. and Minor, W. (1997) Processing of X-ray Diffraction Data Collected in Oscillation Mode Methods Enzymol. 276, 307-326 (Pubitemid 27085611)
-
(1997)
Methods in Enzymology
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
34
-
-
79953737180
-
Overview of the CCP4 suite and current developments
-
Winn, M. D., Ballard, C. C., Cowtan, K. D., Dodson, E. J., Emsley, P., Evans, P. R., Keegan, R. M., Krissinel, E. B., Leslie, A. G., McCoy, A., McNicholas, S. J., Murshudov, G. N., Pannu, N. S., Potterton, E. A., Powell, H. R., Read, R. J., Vagin, A., and Wilson, K. S. (2011) Overview of the CCP4 suite and current developments Acta Crystallogr. D67, 235-242
-
(2011)
Acta Crystallogr.
, vol.67
, pp. 235-242
-
-
Winn, M.D.1
Ballard, C.C.2
Cowtan, K.D.3
Dodson, E.J.4
Emsley, P.5
Evans, P.R.6
Keegan, R.M.7
Krissinel, E.B.8
Leslie, A.G.9
McCoy, A.10
McNicholas, S.J.11
Murshudov, G.N.12
Pannu, N.S.13
Potterton, E.A.14
Powell, H.R.15
Read, R.J.16
Vagin, A.17
Wilson, K.S.18
-
35
-
-
77949535720
-
Features and development of Coot
-
Emsley, P., Lohkamp, B., Scott, W. G., and Cowtan, K. (2010) Features and development of Coot Acta Crystallogr. D66, 486-501
-
(2010)
Acta Crystallogr.
, vol.66
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
-
36
-
-
16644364842
-
REFMAC5 dictionary: Organization of prior chemical knowledge and guidelines for its use
-
DOI 10.1107/S0907444904023510
-
Vagin, A. A., Steiner, R. A., Lebedev, A. A., Potterton, L., McNicholas, S., Long, F., and Murshudov, G. N. (2004) REFMAC5 dictionary: Organization of prior chemical knowledge and guidelines for its use Acta Crystallogr. D60, 2184-2195 (Pubitemid 41742770)
-
(2004)
Acta Crystallographica Section D: Biological Crystallography
, vol.60
, Issue.12
, pp. 2184-2195
-
-
Vagin, A.A.1
Steiner, R.A.2
Lebedev, A.A.3
Potterton, L.4
McNicholas, S.5
Long, F.6
Murshudov, G.N.7
-
37
-
-
76449098262
-
PHENIX: A comprehensive Python-based system for macromolecular structure solution
-
Adams, P. D., Afonine, P. V., Bunkoczi, G., Chen, V. B., Davis, I. W., Echols, N., Headd, J. J., Hung, L. W., Kapral, G. J., Grosse-Kunstleve, R. W., McCoy, A. J., Moriarty, N. W., Oeffner, R., Read, R. J., Richardson, D. C., Richardson, J. S., Terwilliger, T. C., and Zwart, P. H. (2010) PHENIX: A comprehensive Python-based system for macromolecular structure solution Acta Crystallogr. D66, 213-221
-
(2010)
Acta Crystallogr.
, vol.66
, pp. 213-221
-
-
Adams, P.D.1
Afonine, P.V.2
Bunkoczi, G.3
Chen, V.B.4
Davis, I.W.5
Echols, N.6
Headd, J.J.7
Hung, L.W.8
Kapral, G.J.9
Grosse-Kunstleve, R.W.10
McCoy, A.J.11
Moriarty, N.W.12
Oeffner, R.13
Read, R.J.14
Richardson, D.C.15
Richardson, J.S.16
Terwilliger, T.C.17
Zwart, P.H.18
-
38
-
-
74549178560
-
MolProbity: All-atom structure validation for macromolecular crystallography
-
Chen, V. B., Arendall, W. B., III, Headd, J. J., Keedy, D. A., Immormino, R. M., Kapral, G. J., Murray, L. W., Richardson, J. S., and Richardson, D. C. (2010) MolProbity: All-atom structure validation for macromolecular crystallography Acta Crystallogr. D66, 12-21
-
(2010)
Acta Crystallogr.
, vol.66
, pp. 12-21
-
-
Chen, V.B.1
Iii, B.A.W.2
Headd, J.J.3
Keedy, D.A.4
Immormino, R.M.5
Kapral, G.J.6
Murray, L.W.7
Richardson, J.S.8
Richardson, D.C.9
-
39
-
-
79953759821
-
IMOSFLM: A new graphical interface for diffraction-image processing with MOSFLM
-
Battye, T. G., Kontogiannis, L., Johnson, O., Powell, H. R., and Leslie, A. G. (2011) iMOSFLM: A new graphical interface for diffraction-image processing with MOSFLM Acta Crystallogr. D67, 271-281
-
(2011)
Acta Crystallogr.
, vol.67
, pp. 271-281
-
-
Battye, T.G.1
Kontogiannis, L.2
Johnson, O.3
Powell, H.R.4
Leslie, A.G.5
-
40
-
-
0030915704
-
Improved R-factors for diffraction data analysis in macromolecular crystallography
-
DOI 10.1038/nsb0497-269
-
Diederichs, K. and Karplus, P. A. (1997) Improved R-factors for diffraction data analysis in macromolecular crystallography Nat. Struct. Biol. 4, 269-275 (Pubitemid 27157198)
-
(1997)
Nature Structural Biology
, vol.4
, Issue.4
, pp. 269-275
-
-
Diederichs, K.1
Karplus, P.A.2
-
41
-
-
0033179468
-
The specificity-conferring code of adenylation domains in nonribosomal peptide synthetases
-
DOI 10.1016/S1074-5521(99)80082-9
-
Stachelhaus, T., Mootz, H. D., and Marahiel, M. A. (1999) The specificity-conferring code of adenylation domains in nonribosomal peptide synthetases Chem. Biol. 6, 493-505 (Pubitemid 29380764)
-
(1999)
Chemistry and Biology
, vol.6
, Issue.8
, pp. 493-505
-
-
Stachelhaus, T.1
Mootz, H.D.2
Marahiel, M.A.3
-
42
-
-
26944502019
-
Specificity prediction of adenylation domains in nonribosomal peptide synthetases (NRPS) using transductive support vector machines (TSVMs)
-
DOI 10.1093/nar/gki885
-
Rausch, C., Weber, T., Kohlbacher, O., Wohlleben, W., and Huson, D. H. (2005) Specificity prediction of adenylation domains in nonribosomal peptide synthetases (NRPS) using transductive support vector machines (TSVMs) Nucleic Acids Res. 33, 5799-5808 (Pubitemid 41742599)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.18
, pp. 5799-5808
-
-
Rausch, C.1
Weber, T.2
Kohlbacher, O.3
Wohlleben, W.4
Huson, D.H.5
-
43
-
-
0037133231
-
Characterization of the propionyl-CoA synthetase (PrpE) enzyme of Salmonella enterica: Residue lys592 is required for propionyl-AMP synthesis
-
DOI 10.1021/bi015647q
-
Horswill, A. R. and Escalante-Semerena, J. C. (2002) Characterization of the propionyl-CoA synthetase (PrpE) enzyme of Salmonella enterica: Residue Lys592 is required for propionyl-AMP synthesis Biochemistry 41, 2379-2387 (Pubitemid 34160900)
-
(2002)
Biochemistry
, vol.41
, Issue.7
, pp. 2379-2387
-
-
Horswill, A.R.1
Escalante-Semerena, J.C.2
-
44
-
-
80855147553
-
Function of MbtH homologs in nonribosomal peptide biosynthesis and applications in secondary metabolite discovery
-
Baltz, R. H. (2011) Function of MbtH homologs in nonribosomal peptide biosynthesis and applications in secondary metabolite discovery J. Ind. Microbiol. Biotechnol. 38, 1747-1760
-
(2011)
J. Ind. Microbiol. Biotechnol.
, vol.38
, pp. 1747-1760
-
-
Baltz, R.H.1
-
45
-
-
77957920621
-
MbtH-like proteins as integral components of bacterial nonribosomal peptide synthetases
-
Felnagle, E. A., Barkei, J. J., Park, H., Podevels, A. M., McMahon, M. D., Drott, D. W., and Thomas, M. G. (2010) MbtH-like proteins as integral components of bacterial nonribosomal peptide synthetases Biochemistry 49, 8815-8817
-
(2010)
Biochemistry
, vol.49
, pp. 8815-8817
-
-
Felnagle, E.A.1
Barkei, J.J.2
Park, H.3
Podevels, A.M.4
McMahon, M.D.5
Drott, D.W.6
Thomas, M.G.7
-
46
-
-
78649307586
-
Activation of the pacidamycin PacL adenylation domain by MbtH-like proteins
-
Zhang, W., Heemstra, J. R., Jr., Walsh, C. T., and Imker, H. J. (2010) Activation of the pacidamycin PacL adenylation domain by MbtH-like proteins Biochemistry 49, 9946-9947
-
(2010)
Biochemistry
, vol.49
, pp. 9946-9947
-
-
Zhang, W.1
Heemstra Jr., J.R.2
Walsh, C.T.3
Imker, H.J.4
-
47
-
-
34249053161
-
MbtH-like protein-mediated cross-talk between non-ribosomal peptide antibiotic and siderophore biosynthetic pathways in Streptomyces coelicolor M145
-
DOI 10.1099/mic.0.2006/003145-0
-
Lautru, S., Oves-Costales, D., Pernodet, J. L., and Challis, G. L. (2007) MbtH-like protein-mediated cross-talk between non-ribosomal peptide antibiotic and siderophore biosynthetic pathways in Streptomyces coelicolor M145 Microbiology 153, 1405-1412 (Pubitemid 46779996)
-
(2007)
Microbiology
, vol.153
, Issue.5
, pp. 1405-1412
-
-
Lautru, S.1
Oves-Costales, D.2
Pernodet, J.-L.3
Challis, G.L.4
-
48
-
-
34249004256
-
Effects of deletions of mbtH-like genes on clorobiocin biosythesis in Streptomyces coelicolor
-
DOI 10.1099/mic.0.2006/002998-0
-
Wolpert, M., Gust, B., Kammerer, B., and Heide, L. (2007) Effects of deletions of mbtH-like genes on clorobiocin biosynthesis in Streptomyces coelicolor Microbiology 153, 1413-1423 (Pubitemid 46779997)
-
(2007)
Microbiology
, vol.153
, Issue.5
, pp. 1413-1423
-
-
Wolpert, M.1
Gust, B.2
Kammerer, B.3
Heide, L.4
-
49
-
-
34248994204
-
A mechanism-based aryl carrier protein/thiolation domain affinity probe
-
DOI 10.1021/ja069201e
-
Qiao, C., Wilson, D. J., Bennett, E. M., and Aldrich, C. C. (2007) A mechanism-based aryl carrier protein/thiolation domain affinity probe J. Am. Chem. Soc. 129, 6350-6351 (Pubitemid 46799313)
-
(2007)
Journal of the American Chemical Society
, vol.129
, Issue.20
, pp. 6350-6351
-
-
Qiao, C.1
Wilson, D.J.2
Bennett, E.M.3
Aldrich, C.C.4
-
50
-
-
0037452897
-
The 1.75 A crystal structure of acetyl-CoA synthetase bound to adenosine-5′-propylphosphate and coenzyme A
-
DOI 10.1021/bi0271603
-
Gulick, A. M., Starai, V. J., Horswill, A. R., Homick, K. M., and Escalante-Semerena, J. C. (2003) The 1.75 Å crystal structure of acetyl-CoA synthetase bound to adenosine-5′-propylphosphate and coenzyme A Biochemistry 42, 2866-2873 (Pubitemid 36331530)
-
(2003)
Biochemistry
, vol.42
, Issue.10
, pp. 2866-2873
-
-
Gulick, A.M.1
Starai, V.J.2
Horswill, A.R.3
Homick, K.M.4
Escalante-Semerena, J.C.5
-
51
-
-
67349140643
-
Structural snapshots for the conformation-dependent catalysis by human medium-chain acyl-coenzyme A synthetase ACSM2A
-
Kochan, G., Pilka, E. S., von Delft, F., Oppermann, U., and Yue, W. W. (2009) Structural snapshots for the conformation-dependent catalysis by human medium-chain acyl-coenzyme A synthetase ACSM2A J. Mol. Biol. 388, 997-1008
-
(2009)
J. Mol. Biol.
, vol.388
, pp. 997-1008
-
-
Kochan, G.1
Pilka, E.S.2
Von Delft, F.3
Oppermann, U.4
Yue, W.W.5
-
52
-
-
0034013269
-
Predictive, structure-based model of amino acid recognition by nonribosomal peptide synthetase adenylation domains
-
DOI 10.1016/S1074-5521(00)00091-0
-
Challis, G. L., Ravel, J., and Townsend, C. A. (2000) Predictive, structure-based model of amino acid recognition by nonribosomal peptide synthetase adenylation domains Chem. Biol. 7, 211-224 (Pubitemid 30147205)
-
(2000)
Chemistry and Biology
, vol.7
, Issue.3
, pp. 211-224
-
-
Challis, G.L.1
Ravel, J.2
Townsend, C.A.3
-
53
-
-
77951294519
-
Nonribosomal peptide synthetases: Structures and dynamics
-
Strieker, M., Tanovic, A., and Marahiel, M. A. (2010) Nonribosomal peptide synthetases: Structures and dynamics Curr. Opin. Struct. Biol. 20, 234-240
-
(2010)
Curr. Opin. Struct. Biol.
, vol.20
, pp. 234-240
-
-
Strieker, M.1
Tanovic, A.2
Marahiel, M.A.3
-
54
-
-
79956126297
-
Sequential bioluminescence resonance energy transfer-fluorescence resonance energy transfer-based ratiometric protease assays with fusion proteins of firefly luciferase and red fluorescent protein
-
Branchini, B. R., Rosenberg, J. C., Ablamsky, D. M., Taylor, K. P., Southworth, T. L., and Linder, S. J. (2011) Sequential bioluminescence resonance energy transfer-fluorescence resonance energy transfer-based ratiometric protease assays with fusion proteins of firefly luciferase and red fluorescent protein Anal. Biochem. 414, 239-245
-
(2011)
Anal. Biochem.
, vol.414
, pp. 239-245
-
-
Branchini, B.R.1
Rosenberg, J.C.2
Ablamsky, D.M.3
Taylor, K.P.4
Southworth, T.L.5
Linder, S.J.6
-
55
-
-
55249096220
-
Crystal structure and enantiomer selection by d -alanyl carrier protein ligase DltA from Bacillus cereus
-
Du, L., He, Y., and Luo, Y. (2008) Crystal structure and enantiomer selection by d -alanyl carrier protein ligase DltA from Bacillus cereus Biochemistry 47, 11473-11480
-
(2008)
Biochemistry
, vol.47
, pp. 11473-11480
-
-
Du, L.1
He, Y.2
Luo, Y.3
-
56
-
-
0034739007
-
Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen
-
Stover, C. K., Pham, X. Q., Erwin, A. L., Mizoguchi, S. D., Warrener, P., Hickey, M. J., Brinkman, F. S., Hufnagle, W. O., Kowalik, D. J., Lagrou, M., Garber, R. L., Goltry, L., Tolentino, E., Westbrock-Wadman, S., Yuan, Y., Brody, L. L., Coulter, S. N., Folger, K. R., Kas, A., Larbig, K., Lim, R., Smith, K., Spencer, D., Wong, G. K., Wu, Z., Paulsen, I. T., Reizer, J., Saier, M. H., Hancock, R. E., Lory, S., and Olson, M. V. (2000) Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen Nature 406, 959-964
-
(2000)
Nature
, vol.406
, pp. 959-964
-
-
Stover, C.K.1
Pham, X.Q.2
Erwin, A.L.3
Mizoguchi, S.D.4
Warrener, P.5
Hickey, M.J.6
Brinkman, F.S.7
Hufnagle, W.O.8
Kowalik, D.J.9
Lagrou, M.10
Garber, R.L.11
Goltry, L.12
Tolentino, E.13
Westbrock-Wadman, S.14
Yuan, Y.15
Brody, L.L.16
Coulter, S.N.17
Folger, K.R.18
Kas, A.19
Larbig, K.20
Lim, R.21
Smith, K.22
Spencer, D.23
Wong, G.K.24
Wu, Z.25
Paulsen, I.T.26
Reizer, J.27
Saier, M.H.28
Hancock, R.E.29
Lory, S.30
Olson, M.V.31
more..
|