-
1
-
-
35848929694
-
Analysis and validation of proteomic data generated by tandem mass spectrometry
-
Nesvizhskii, A. I.; Vitek, O.; Aebersold, R. Analysis and validation of proteomic data generated by tandem mass spectrometry Nat. Methods 2007, 4, 787-797
-
(2007)
Nat. Methods
, vol.4
, pp. 787-797
-
-
Nesvizhskii, A.I.1
Vitek, O.2
Aebersold, R.3
-
2
-
-
33645813378
-
Mass spectrometry and protein analysis
-
Domon, B.; Aebersold, R. Mass spectrometry and protein analysis Science 2006, 312, 212-217
-
(2006)
Science
, vol.312
, pp. 212-217
-
-
Domon, B.1
Aebersold, R.2
-
3
-
-
34547156610
-
A platform for accurate mass and time analyses of mass spectrometry data
-
May, D.; Fitzgibbon, M.; Liu, Y.; Holzman, T. A platform for accurate mass and time analyses of mass spectrometry data J. Proteome Res. 2007, 6, 2685-2694
-
(2007)
J. Proteome Res.
, vol.6
, pp. 2685-2694
-
-
May, D.1
Fitzgibbon, M.2
Liu, Y.3
Holzman, T.4
-
4
-
-
35348965139
-
SuperHirn - A novel tool for high resolution LC-MS-based peptide/protein profiling
-
Mueller, L. N.; Rinner, O.; Schmidt, A.; Letarte, S. SuperHirn-a novel tool for high resolution LC-MS-based peptide/protein profiling Proteomics 2007, 7, 3470-3480
-
(2007)
Proteomics
, vol.7
, pp. 3470-3480
-
-
Mueller, L.N.1
Rinner, O.2
Schmidt, A.3
Letarte, S.4
-
5
-
-
42249108173
-
OpenMS - An open-source software framework for mass spectrometry
-
Sturm, M.; Bertsch, A.; Gropl, C.; Hildebrandt, A. OpenMS-an open-source software framework for mass spectrometry BMC Bioinformatics 2008, 9, 163
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 163
-
-
Sturm, M.1
Bertsch, A.2
Gropl, C.3
Hildebrandt, A.4
-
6
-
-
3242731195
-
A model for random sampling and estimation of relative protein abundance in shotgun proteomics
-
Liu, H.; Sadygov, R. G.; Yates, J. R., 3rd A model for random sampling and estimation of relative protein abundance in shotgun proteomics Anal. Chem. 2004, 76, 4193-4201
-
(2004)
Anal. Chem.
, vol.76
, pp. 4193-4201
-
-
Liu, H.1
Sadygov, R.G.2
Yates III, J.R.3
-
7
-
-
34247614401
-
Quantitative shotgun proteomics using a protease with broad specificity and normalized spectral abundance factors
-
Zybailov, B. L.; Florens, L.; Washburn, M. P. Quantitative shotgun proteomics using a protease with broad specificity and normalized spectral abundance factors Mol. Biosyst. 2007, 3, 354-360
-
(2007)
Mol. Biosyst.
, vol.3
, pp. 354-360
-
-
Zybailov, B.L.1
Florens, L.2
Washburn, M.P.3
-
8
-
-
77951650200
-
Role of spectral counting in quantitative proteomics
-
Lundgren, D. H.; Hwang, S. I.; Wu, L. F.; Han, D. K. Role of spectral counting in quantitative proteomics Expert Rev. Proteomics 2010, 7, 39-53
-
(2010)
Expert Rev. Proteomics
, vol.7
, pp. 39-53
-
-
Lundgren, D.H.1
Hwang, S.I.2
Wu, L.F.3
Han, D.K.4
-
9
-
-
79959734666
-
Comparative evaluation of label-free SINQ normalized spectral index quantitation in the central proteomics facilities pipeline
-
Trudgian, D. C.; Ridlova, G.; Fischer, R.; Mackeen, M. M. Comparative evaluation of label-free SINQ normalized spectral index quantitation in the central proteomics facilities pipeline Proteomics 2011, 11, 2790-2797
-
(2011)
Proteomics
, vol.11
, pp. 2790-2797
-
-
Trudgian, D.C.1
Ridlova, G.2
Fischer, R.3
MacKeen, M.M.4
-
10
-
-
79952304665
-
Generic workflow for quality assessment of quantitative label-free LC-MS analysis
-
Sandin, M.; Krogh, M.; Hansson, K.; Levander, F. Generic workflow for quality assessment of quantitative label-free LC-MS analysis Proteomics 2011, 11, 1114-1124
-
(2011)
Proteomics
, vol.11
, pp. 1114-1124
-
-
Sandin, M.1
Krogh, M.2
Hansson, K.3
Levander, F.4
-
11
-
-
38649095599
-
An assessment of software solutions for the analysis of mass spectrometry based quantitative proteomics data
-
Mueller, L. N.; Brusniak, M.-Y.; Mani, D. R.; Aebersold, R. An assessment of software solutions for the analysis of mass spectrometry based quantitative proteomics data J. Proteome Res. 2008, 7, 51-61
-
(2008)
J. Proteome Res.
, vol.7
, pp. 51-61
-
-
Mueller, L.N.1
Brusniak, M.-Y.2
Mani, D.R.3
Aebersold, R.4
-
12
-
-
41149127192
-
A label-free quantification method by MS/MS TIC compared to SILAC and spectral counting in a proteomics screen
-
Asara, J. M.; Christofk, H. R.; Freimark, L. M.; Cantley, L. C. A label-free quantification method by MS/MS TIC compared to SILAC and spectral counting in a proteomics screen Proteomics 2008, 8, 994-999
-
(2008)
Proteomics
, vol.8
, pp. 994-999
-
-
Asara, J.M.1
Christofk, H.R.2
Freimark, L.M.3
Cantley, L.C.4
-
13
-
-
26444506068
-
Correlation of relative abundance ratios derived from peptide ion chromatograms and spectral counting for quantitative proteomic analysis using stable isotope labeling
-
Zybailov, B.; Coleman, M. K.; Florens, L.; Washburn, M. P. Correlation of relative abundance ratios derived from peptide ion chromatograms and spectral counting for quantitative proteomic analysis using stable isotope labeling Anal. Chem. 2005, 77, 6218-6224
-
(2005)
Anal. Chem.
, vol.77
, pp. 6218-6224
-
-
Zybailov, B.1
Coleman, M.K.2
Florens, L.3
Washburn, M.P.4
-
14
-
-
27644543078
-
Comparison of label-free methods for quantifying human proteins by shotgun proteomics
-
Old, W. M.; Meyer-Arendt, K.; Aveline-Wolf, L.; Pierce, K. G. Comparison of label-free methods for quantifying human proteins by shotgun proteomics Mol. Cell. Proteomics 2005, 4, 1487-1502
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 1487-1502
-
-
Old, W.M.1
Meyer-Arendt, K.2
Aveline-Wolf, L.3
Pierce, K.G.4
-
15
-
-
46249106990
-
Mapping and quantifying mammalian transcriptomes by RNA-Seq
-
Mortazavi, A.; Williams, B. A.; McCue, K.; Schaeffer, L.; Wold, B. Mapping and quantifying mammalian transcriptomes by RNA-Seq Nat. Methods 2008, 5, 621-628
-
(2008)
Nat. Methods
, vol.5
, pp. 621-628
-
-
Mortazavi, A.1
Williams, B.A.2
McCue, K.3
Schaeffer, L.4
Wold, B.5
-
16
-
-
0035999672
-
Analysis of mRNA expression and protein abundance data: An approach for the comparison of the enrichment of features in the cellular population of proteins and transcripts
-
Greenbaum, D.; Jansen, R.; Gerstein, M. Analysis of mRNA expression and protein abundance data: an approach for the comparison of the enrichment of features in the cellular population of proteins and transcripts Bioinformatics 2002, 18, 585-596
-
(2002)
Bioinformatics
, vol.18
, pp. 585-596
-
-
Greenbaum, D.1
Jansen, R.2
Gerstein, M.3
-
17
-
-
0037453060
-
Protein pathway and complex clustering of correlated mRNA and protein expression analyses in Saccharomyces cerevisiae
-
Washburn, M. P.; Koller, A.; Oshiro, G.; Ulaszek, R. R. Protein pathway and complex clustering of correlated mRNA and protein expression analyses in Saccharomyces cerevisiae Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 3107-3112
-
(2003)
Proc. Natl. Acad. Sci. U.S.A.
, vol.100
, pp. 3107-3112
-
-
Washburn, M.P.1
Koller, A.2
Oshiro, G.3
Ulaszek, R.R.4
-
18
-
-
33845790070
-
Correlation of mRNA expression and protein abundance affected by multiple sequence features related to translational efficiency in Desulfovibrio vulgaris: A quantitative analysis
-
Nie, L.; Wu, G.; Zhang, W. Correlation of mRNA expression and protein abundance affected by multiple sequence features related to translational efficiency in Desulfovibrio vulgaris: a quantitative analysis Genetics 2006, 174, 2229-2243
-
(2006)
Genetics
, vol.174
, pp. 2229-2243
-
-
Nie, L.1
Wu, G.2
Zhang, W.3
-
19
-
-
33846165487
-
Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation
-
Lu, P.; Vogel, C.; Wang, R.; Yao, X.; Marcotte, E. M. Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation Nat. Biotechnol. 2007, 25, 117-124
-
(2007)
Nat. Biotechnol.
, vol.25
, pp. 117-124
-
-
Lu, P.1
Vogel, C.2
Wang, R.3
Yao, X.4
Marcotte, E.M.5
-
20
-
-
33645993265
-
Global survey of organ and organelle protein expression in mouse: Combined proteomic and transcriptomic profiling
-
Kislinger, T.; Cox, B.; Kannan, A.; Chung, C. Global survey of organ and organelle protein expression in mouse: combined proteomic and transcriptomic profiling Cell 2006, 125, 173-186
-
(2006)
Cell
, vol.125
, pp. 173-186
-
-
Kislinger, T.1
Cox, B.2
Kannan, A.3
Chung, C.4
-
21
-
-
79957579140
-
Translations coming of age
-
Vogel, C. Translations coming of age Mol. Syst. Biol. 2011, 7, 498
-
(2011)
Mol. Syst. Biol.
, vol.7
, pp. 498
-
-
Vogel, C.1
-
22
-
-
79956322553
-
Global quantification of mammalian gene expression control
-
Schwanhausser, B.; Busse, D.; Li, N.; Dittmar, G. Global quantification of mammalian gene expression control Nature 2011, 473, 337-342
-
(2011)
Nature
, vol.473
, pp. 337-342
-
-
Schwanhausser, B.1
Busse, D.2
Li, N.3
Dittmar, G.4
-
23
-
-
76649110552
-
Delayed correlation of mRNA and protein expression in rapamycin-treated cells and a role for Ggc1 in cellular sensitivity to rapamycin
-
Fournier, M. L.; Paulson, A.; Pavelka, N.; Mosley, A. L. Delayed correlation of mRNA and protein expression in rapamycin-treated cells and a role for Ggc1 in cellular sensitivity to rapamycin Mol. Cell. Proteomics 2010, 9, 271-284
-
(2010)
Mol. Cell. Proteomics
, vol.9
, pp. 271-284
-
-
Fournier, M.L.1
Paulson, A.2
Pavelka, N.3
Mosley, A.L.4
-
24
-
-
79960581086
-
A dynamic model of proteome changes reveals new roles for transcript alteration in yeast
-
Lee, M. V.; Topper, S. E.; Hubler, S. L.; Hose, J. A dynamic model of proteome changes reveals new roles for transcript alteration in yeast Mol. Syst. Biol. 2011, 7, 514
-
(2011)
Mol. Syst. Biol.
, vol.7
, pp. 514
-
-
Lee, M.V.1
Topper, S.E.2
Hubler, S.L.3
Hose, J.4
-
25
-
-
46349103594
-
A mitochondrial protein compendium elucidates complex i disease biology
-
Pagliarini, D. J.; Calvo, S. E.; Chang, B.; Sheth, S. A. A mitochondrial protein compendium elucidates complex I disease biology Cell 2008, 134, 112-123
-
(2008)
Cell
, vol.134
, pp. 112-123
-
-
Pagliarini, D.J.1
Calvo, S.E.2
Chang, B.3
Sheth, S.A.4
-
26
-
-
11144358198
-
A gene atlas of the mouse and human protein-encoding transcriptomes
-
Su, A. I.; Wiltshire, T.; Batalov, S.; Lapp, H. A gene atlas of the mouse and human protein-encoding transcriptomes Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 6062-6067
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, pp. 6062-6067
-
-
Su, A.I.1
Wiltshire, T.2
Batalov, S.3
Lapp, H.4
-
27
-
-
3142702204
-
TANDEM: Matching proteins with tandem mass spectra
-
Craig, R.; Beavis, R. C. TANDEM: matching proteins with tandem mass spectra Bioinformatics 2004, 20, 1466-1467
-
(2004)
Bioinformatics
, vol.20
, pp. 1466-1467
-
-
Craig, R.1
Beavis, R.C.2
-
28
-
-
33750979860
-
General framework for developing and evaluating database scoring algorithms using the TANDEM search engine
-
MacLean, B.; Eng, J. K.; Beavis, R. C.; McIntosh, M. General framework for developing and evaluating database scoring algorithms using the TANDEM search engine Bioinformatics 2006, 22, 2830-2832
-
(2006)
Bioinformatics
, vol.22
, pp. 2830-2832
-
-
MacLean, B.1
Eng, J.K.2
Beavis, R.C.3
McIntosh, M.4
-
29
-
-
3042818018
-
The International Protein Index: An integrated database for proteomics experiments
-
Kersey, P. J.; Duarte, J.; Williams, A.; Karavidopoulou, Y. The International Protein Index: an integrated database for proteomics experiments Proteomics 2004, 4, 1985-1988
-
(2004)
Proteomics
, vol.4
, pp. 1985-1988
-
-
Kersey, P.J.1
Duarte, J.2
Williams, A.3
Karavidopoulou, Y.4
-
30
-
-
77949676526
-
A guided tour of the Trans-Proteomic Pipeline
-
Deutsch, E. W.; Mendoza, L.; Shteynberg, D.; Farrah, T. A guided tour of the Trans-Proteomic Pipeline Proteomics 2010, 10, 1150-1159
-
(2010)
Proteomics
, vol.10
, pp. 1150-1159
-
-
Deutsch, E.W.1
Mendoza, L.2
Shteynberg, D.3
Farrah, T.4
-
31
-
-
0037108887
-
Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search
-
Keller, A.; Nesvizhskii, A. I.; Kolker, E.; Aebersold, R. Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search Anal. Chem. 2002, 74, 5383-5392
-
(2002)
Anal. Chem.
, vol.74
, pp. 5383-5392
-
-
Keller, A.1
Nesvizhskii, A.I.2
Kolker, E.3
Aebersold, R.4
-
32
-
-
0042338362
-
A statistical model for identifying proteins by tandem mass spectrometry
-
Nesvizhskii, A. I.; Keller, A.; Kolker, E.; Aebersold, R. A statistical model for identifying proteins by tandem mass spectrometry Anal. Chem. 2003, 75, 4646-4658
-
(2003)
Anal. Chem.
, vol.75
, pp. 4646-4658
-
-
Nesvizhskii, A.I.1
Keller, A.2
Kolker, E.3
Aebersold, R.4
-
33
-
-
27644555055
-
Interpretation of shotgun proteomic data - The protein inference problem
-
Nesvizhskii, A. I.; Aebersold, R. Interpretation of shotgun proteomic data-The protein inference problem Mol. Cell. Proteomics 2005, 4, 1419-1440
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 1419-1440
-
-
Nesvizhskii, A.I.1
Aebersold, R.2
-
34
-
-
77957221582
-
A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics
-
Nesvizhskii, A. I. A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics J. Proteomics 2010, 73, 2092-2123
-
(2010)
J. Proteomics
, vol.73
, pp. 2092-2123
-
-
Nesvizhskii, A.I.1
-
35
-
-
55749105172
-
MS-BID: A Java package for label-free LC-MS-based comparative proteomic analysis
-
Hwang, D.; Zhang, N.; Lee, H.; Yi, E. MS-BID: a Java package for label-free LC-MS-based comparative proteomic analysis Bioinformatics 2008, 24, 2641-2642
-
(2008)
Bioinformatics
, vol.24
, pp. 2641-2642
-
-
Hwang, D.1
Zhang, N.2
Lee, H.3
Yi, E.4
-
36
-
-
31644446949
-
Absolute quantification of proteins by LCMSE: A virtue of parallel MS acquisition
-
Silva, J. C.; Gorenstein, M. V.; Li, G.-Z.; Vissers, J. P. C; Geromanos, S. J. Absolute quantification of proteins by LCMSE: A virtue of parallel MS acquisition Mol. Cell Proteomics 2006, 5, 144-156
-
(2006)
Mol. Cell Proteomics
, vol.5
, pp. 144-156
-
-
Silva, J.C.1
Gorenstein, M.V.2
Li, G.-Z.3
Vissers, J.P.C.4
Geromanos, S.J.5
-
37
-
-
77956261738
-
Sequence signatures and mRNA concentration can explain two-thirds of protein abundance variation in a human cell line
-
Vogel, C.; Abreu Rde, S.; Ko, D.; Le, S. Y. Sequence signatures and mRNA concentration can explain two-thirds of protein abundance variation in a human cell line Mol. Syst. Biol. 2010, 6, 400
-
(2010)
Mol. Syst. Biol.
, vol.6
, pp. 400
-
-
Vogel, C.1
Abreu Rde, S.2
Ko, D.3
Le, S.Y.4
-
38
-
-
80053046353
-
Comparing next-generation sequencing and microarray technologies in a toxicological study of the effects of aristolochic acid on rat kidneys
-
Su, Z.; Li, Z.; Chen, T.; Li, Q.-Z. Comparing next-generation sequencing and microarray technologies in a toxicological study of the effects of aristolochic acid on rat kidneys Chem. Res. Toxicol. 2011, 24, 1486-1493
-
(2011)
Chem. Res. Toxicol.
, vol.24
, pp. 1486-1493
-
-
Su, Z.1
Li, Z.2
Chen, T.3
Li, Q.-Z.4
-
39
-
-
84855826245
-
Genome-wide gene expression profiling of nucleus accumbens neurons projecting to ventral pallidum using both microarray and transcriptome sequencing
-
published online ahead of print, DOI: 10.3389/fnins.2011.00098
-
Chen, H.; Liu, Z.; Gong, S.; Wu, X.;. Genome-wide gene expression profiling of nucleus accumbens neurons projecting to ventral pallidum using both microarray and transcriptome sequencing. Front. Neurosci. 2011, 5; published online ahead of print, DOI: 10.3389/fnins.2011.00098.
-
(2011)
Front. Neurosci.
, vol.5
-
-
Chen, H.1
Liu, Z.2
Gong, S.3
Wu, X.4
-
40
-
-
76649139789
-
IDEAL-Q, an automated tool for label-free quantitation analysis using an efficient peptide alignment approach and spectral data validation
-
Tsou, C. C.; Tsai, C. F.; Tsui, Y. H.; Sudhir, P. R. IDEAL-Q, an automated tool for label-free quantitation analysis using an efficient peptide alignment approach and spectral data validation Mol. Cell. Proteomics 2010, 9, 131-144
-
(2010)
Mol. Cell. Proteomics
, vol.9
, pp. 131-144
-
-
Tsou, C.C.1
Tsai, C.F.2
Tsui, Y.H.3
Sudhir, P.R.4
-
41
-
-
0037250168
-
The UCSC Genome Browser Database
-
Karolchik, D.; Baertsch, R.; Diekhans, M.; Furey, T. S. The UCSC Genome Browser Database Nucleic Acids Res. 2003, 31, 51-54
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 51-54
-
-
Karolchik, D.1
Baertsch, R.2
Diekhans, M.3
Furey, T.S.4
-
42
-
-
57749195712
-
RNA-Seq: A revolutionary tool for transcriptomics
-
Wang, Z.; Gerstein, M.; Snyder, M. RNA-Seq: a revolutionary tool for transcriptomics Nat. Rev. Genet. 2008, 57-63
-
(2008)
Nat. Rev. Genet.
, pp. 57-63
-
-
Wang, Z.1
Gerstein, M.2
Snyder, M.3
-
43
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
-
Huang, D. W.; Sherman, B. T.; Lempicki, R. A. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources Nat. Protoc. 2008, 4, 44-57
-
(2008)
Nat. Protoc.
, vol.4
, pp. 44-57
-
-
Huang, D.W.1
Sherman, B.T.2
Lempicki, R.A.3
-
44
-
-
55249096894
-
Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast
-
de Godoy, L. M. F.; Olsen, J. V.; Cox, J.; Nielsen, M. L. Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast Nature 2008, 455, 1251-U1260
-
(2008)
Nature
, vol.455
-
-
De Godoy, L.M.F.1
Olsen, J.V.2
Cox, J.3
Nielsen, M.L.4
-
45
-
-
78650642557
-
Defining the transcriptome and proteome in three functionally different human cell lines
-
published online ahead of print, DOI: 10.1038/msb.2010.106
-
Lundberg, E.; Fagerberg, L.; Klevebring, D.; Matic, I.; Defining the transcriptome and proteome in three functionally different human cell lines. Mol. Syst. Biol. 2010, 6; published online ahead of print, DOI: 10.1038/msb.2010.106.
-
(2010)
Mol. Syst. Biol.
, vol.6
-
-
Lundberg, E.1
Fagerberg, L.2
Klevebring, D.3
Matic, I.4
-
46
-
-
72949089708
-
Global signatures of protein and mRNA expression levels
-
Abreu, R. D.; Penalva, L. O.; Marcotte, E. M.; Vogel, C. Global signatures of protein and mRNA expression levels Mol. Biosyst. 2009, 5, 1512-1526
-
(2009)
Mol. Biosyst.
, vol.5
, pp. 1512-1526
-
-
Abreu, R.D.1
Penalva, L.O.2
Marcotte, E.M.3
Vogel, C.4
-
47
-
-
61849105469
-
Mass spectrometry based targeted protein quantification: Methods and applications
-
Pan, S.; Aebersold, R.; Chen, R.; Rush, J. Mass spectrometry based targeted protein quantification: methods and applications J. Proteome Res. 2008, 8, 787-797
-
(2008)
J. Proteome Res.
, vol.8
, pp. 787-797
-
-
Pan, S.1
Aebersold, R.2
Chen, R.3
Rush, J.4
-
48
-
-
84857963102
-
A quantitative spatial proteomics analysis of proteome turnover in human cells
-
published online ahead of print, DOI: 10.1074/mcp.M111.011429
-
Boisvert, F.-M.; Ahmad, Y.; Gierliński, M.; Charrière, F.; A quantitative spatial proteomics analysis of proteome turnover in human cells. Mol. Cell. Proteomics 2011; published online ahead of print, DOI: 10.1074/mcp.M111.011429.
-
(2011)
Mol. Cell. Proteomics
-
-
Boisvert, F.-M.1
Ahmad, Y.2
Gierliński, M.3
Charrière, F.4
-
49
-
-
20144381803
-
Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry
-
DOI: 10.1186/gb-2004-6-1-r9
-
Desiere, F.; Deutsch, E. W.; Nesvizhskii, A. I.; Mallick, P.;. Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry. Genome Biol. 2005, 6; DOI: 10.1186/gb-2004-6-1-r9.
-
(2005)
Genome Biol.
, vol.6
-
-
Desiere, F.1
Deutsch, E.W.2
Nesvizhskii, A.I.3
Mallick, P.4
-
50
-
-
77954615407
-
ProteomeCommons.org collaborative annotation and project management resource integrated with the Tranche Repository
-
Hill, J. A.; Smith, B. E.; Papoulias, P. G.; Andrews, P. C. ProteomeCommons.org collaborative annotation and project management resource integrated with the Tranche Repository J. Proteome Res. 2010, 9, 2809-2811
-
(2010)
J. Proteome Res.
, vol.9
, pp. 2809-2811
-
-
Hill, J.A.1
Smith, B.E.2
Papoulias, P.G.3
Andrews, P.C.4
-
51
-
-
78650850279
-
The utility of mass spectrometry-based proteomic data for validation of novel alternative splice forms reconstructed from RNA-Seq Data: A preliminary assessment
-
Ning, K.; Nesvizhskii, A. I. The utility of mass spectrometry-based proteomic data for validation of novel alternative splice forms reconstructed from RNA-Seq Data: a preliminary assessment BMC Bioinform. 2010, 11, S14
-
(2010)
BMC Bioinform.
, vol.11
, pp. 14
-
-
Ning, K.1
Nesvizhskii, A.I.2
-
52
-
-
77949686097
-
Shotgun proteomics data from multiple organisms reveals remarkable quantitative conservation of the eukaryotic core proteome
-
Weiss, M.; Schrimpf, S.; Hengartner, M. O.; Lercher, M. J.; von Mering, C. Shotgun proteomics data from multiple organisms reveals remarkable quantitative conservation of the eukaryotic core proteome Proteomics 2010, 10, 1297-1306
-
(2010)
Proteomics
, vol.10
, pp. 1297-1306
-
-
Weiss, M.1
Schrimpf, S.2
Hengartner, M.O.3
Lercher, M.J.4
Von Mering, C.5
-
53
-
-
78649642467
-
Protein abundances are more conserved than mRNA abundances across diverse taxa
-
Laurent, J. M.; Vogel, C.; Kwon, T.; Craig, S. A. Protein abundances are more conserved than mRNA abundances across diverse taxa Proteomics 2010, 10, 4209-4212
-
(2010)
Proteomics
, vol.10
, pp. 4209-4212
-
-
Laurent, J.M.1
Vogel, C.2
Kwon, T.3
Craig, S.A.4
|