-
1
-
-
0038324415
-
Generation and analysis of an artificial gene dosage series in tomato to study the mechanisms by which the cloned quantitative trait locus fw2.2 controls fruit size
-
Liu JP, Cong B, Tanksley SD, (2003) Generation and analysis of an artificial gene dosage series in tomato to study the mechanisms by which the cloned quantitative trait locus fw2.2 controls fruit size. Plant Physiol 132: 292-299.
-
(2003)
Plant Physiol
, vol.132
, pp. 292-299
-
-
Liu, J.P.1
Cong, B.2
Tanksley, S.D.3
-
2
-
-
33645746673
-
Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement
-
Schauer N, Semel Y, Roessner U, Gur A, Balbo I, et al. (2006) Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement. Nat Biotechnol 24: 447-454.
-
(2006)
Nat Biotechnol
, vol.24
, pp. 447-454
-
-
Schauer, N.1
Semel, Y.2
Roessner, U.3
Gur, A.4
Balbo, I.5
-
3
-
-
33646182061
-
Effects of preharvest foliar spray of 'Limewash' on water relations, quantity, quality, and shelf life of bell pepper under water deficit conditions
-
Moftah AE, Al-Redhaiman KN, (2006) Effects of preharvest foliar spray of 'Limewash' on water relations, quantity, quality, and shelf life of bell pepper under water deficit conditions. Eur J Hortic Sci 71: 78-83.
-
(2006)
Eur J Hortic Sci
, vol.71
, pp. 78-83
-
-
Moftah, A.E.1
Al-Redhaiman, K.N.2
-
4
-
-
70350498680
-
GDP-d-mannose 3,5-epimerase (GME) plays a key role at the intersection of ascorbate and non-cellulosic cell-wall biosynthesis in tomato
-
Gilbert L, Alhagdow M, Nunes-Nesi A, Quemener B, Guillon F, et al. (2009) GDP-d-mannose 3,5-epimerase (GME) plays a key role at the intersection of ascorbate and non-cellulosic cell-wall biosynthesis in tomato. Plant J 60: 499-508.
-
(2009)
Plant J
, vol.60
, pp. 499-508
-
-
Gilbert, L.1
Alhagdow, M.2
Nunes-Nesi, A.3
Quemener, B.4
Guillon, F.5
-
5
-
-
77954266751
-
Characterization of the Branched-Chain Amino Acid Aminotransferase Enzyme Family in Tomato
-
Maloney GS, Kochevenko A, Tieman DM, Tohge T, Krieger U, et al. (2010) Characterization of the Branched-Chain Amino Acid Aminotransferase Enzyme Family in Tomato. Plant Physiol 153: 925-936.
-
(2010)
Plant Physiol
, vol.153
, pp. 925-936
-
-
Maloney, G.S.1
Kochevenko, A.2
Tieman, D.M.3
Tohge, T.4
Krieger, U.5
-
6
-
-
0035781190
-
Molecular biology of fruit maturation and ripening
-
Giovannoni J, (2001) Molecular biology of fruit maturation and ripening. Annual Review of Plant Phys 52: 725-749.
-
(2001)
Annual Review of Plant Phys
, vol.52
, pp. 725-749
-
-
Giovannoni, J.1
-
7
-
-
36549080467
-
An integrated view of quantitative trait variation using tomato interspecific introgression lines
-
Lippman ZB, Semel Y, Zamir D, (2007) An integrated view of quantitative trait variation using tomato interspecific introgression lines. Curr Opin Genet Dev 17: 545-552.
-
(2007)
Curr Opin Genet Dev
, vol.17
, pp. 545-552
-
-
Lippman, Z.B.1
Semel, Y.2
Zamir, D.3
-
8
-
-
0001608495
-
Gene expression prior to radicle emergence in imbibed tomato seeds
-
In: Black MJ, Bradford KJ, Vazquez-Ramos J, editors, Oxfordshire, UK, CABI
-
Bradford KJ, Chen F, Cooley MB, Dahal P, Downie B, et al. (2000) Gene expression prior to radicle emergence in imbibed tomato seeds. In: Black MJ, Bradford KJ, Vazquez-Ramos J, editors. Seed Biology: Advances and Applications Oxfordshire, UK CABI pp. 231-251.
-
(2000)
Seed Biology: Advances and Applications
, pp. 231-251
-
-
Bradford, K.J.1
Chen, F.2
Cooley, M.B.3
Dahal, P.4
Downie, B.5
-
9
-
-
0031820826
-
The tomato seed as a model system to study seed development and germination
-
Hilhorst HWM, Groot SPC, Bino RJ, (1998) The tomato seed as a model system to study seed development and germination. Acta Bot Neerl 47: 169-183.
-
(1998)
Acta Bot Neerl
, vol.47
, pp. 169-183
-
-
Hilhorst, H.W.M.1
Groot, S.P.C.2
Bino, R.J.3
-
10
-
-
84855644707
-
Seed Germination
-
In: Eng-Chong P, Davey MR, editors, Heidelberg, Germany, Springer
-
Martin RC, Pluskota WE, Nonogaki H, (2010) Seed Germination. In: Eng-Chong P, Davey MR, editors. Plant Developmental Biology- Biotechnological Perspectives, Vol 1. 1st ed Heidelberg, Germany Springer pp. 383-404.
-
(2010)
Plant Developmental Biology - Biotechnological Perspectives, Vol 1. 1st Ed
, pp. 383-404
-
-
Martin, R.C.1
Pluskota, W.E.2
Nonogaki, H.3
-
11
-
-
0034617236
-
fw2.2: A quantitative trait locus key to the evolution of tomato fruit size
-
Frary A, Nesbitt TC, Grandillo S, van der Knaap E, Cong B, et al. (2000) fw2.2: A quantitative trait locus key to the evolution of tomato fruit size. Science 289: 85-88.
-
(2000)
Science
, vol.289
, pp. 85-88
-
-
Frary, A.1
Nesbitt, T.C.2
Grandillo, S.3
van der Knaap, E.4
Cong, B.5
-
12
-
-
4143055179
-
Carbohydrate metabolism
-
In: Christou P, Klee HK, editors, Chichester, UK, Wiley
-
Fernie AR, Willmitzer L, (2004) Carbohydrate metabolism. In: Christou P, Klee HK, editors. Handbook of Plant Biotechnology Chichester, UK Wiley.
-
(2004)
Handbook of Plant Biotechnology
-
-
Fernie, A.R.1
Willmitzer, L.2
-
13
-
-
0030880972
-
Seed banks and molecular maps: Unlocking genetic potential from the wild
-
Tanksley SD, McCouch SR, (1997) Seed banks and molecular maps: Unlocking genetic potential from the wild. Science 277: 1063-1066.
-
(1997)
Science
, vol.277
, pp. 1063-1066
-
-
Tanksley, S.D.1
McCouch, S.R.2
-
14
-
-
8844221323
-
Diversifying selection in plant breeding
-
doi:10.1371/journal.pbio.0020347
-
McCouch S, (2004) Diversifying selection in plant breeding. PLoS Biol 2: e347 doi:10.1371/journal.pbio.0020347.
-
(2004)
PLoS Biol
, vol.2
-
-
McCouch, S.1
-
15
-
-
33845618112
-
The molecular genetics of crop domestication
-
Doebley JF, Gaut BS, Smith BD, (2006) The molecular genetics of crop domestication. Cell 127: 1309-1321.
-
(2006)
Cell
, vol.127
, pp. 1309-1321
-
-
Doebley, J.F.1
Gaut, B.S.2
Smith, B.D.3
-
16
-
-
33344455283
-
Natural genetic variation for improving crop quality
-
Fernie AR, Tadmor Y, Zamir D, (2006) Natural genetic variation for improving crop quality. Curr Opin Plant Biol 9: 196-202.
-
(2006)
Curr Opin Plant Biol
, vol.9
, pp. 196-202
-
-
Fernie, A.R.1
Tadmor, Y.2
Zamir, D.3
-
18
-
-
0004928887
-
Molecular evidence for a missing relative of maize and the introgression of its chloroplast genome into Zea-Perennis
-
Doebley J, (1989) Molecular evidence for a missing relative of maize and the introgression of its chloroplast genome into Zea-Perennis. Evolution 43: 1555-1559.
-
(1989)
Evolution
, vol.43
, pp. 1555-1559
-
-
Doebley, J.1
-
19
-
-
0030041874
-
Isozyme relationships between cultivated artichoke and the wild relatives
-
Rottenberg A, Zohary D, Nevo E, (1996) Isozyme relationships between cultivated artichoke and the wild relatives. Genet Resour Crop Ev 43: 59-62.
-
(1996)
Genet Resour Crop Ev
, vol.43
, pp. 59-62
-
-
Rottenberg, A.1
Zohary, D.2
Nevo, E.3
-
20
-
-
0036272895
-
Genetics and geography of wild cereal domestication in the Near East
-
Salamini F, Ozkan H, Brandolini A, Schafer-Pregl R, Martin W, (2002) Genetics and geography of wild cereal domestication in the Near East. Nat Rev Genet 3: 429-441.
-
(2002)
Nat Rev Genet
, vol.3
, pp. 429-441
-
-
Salamini, F.1
Ozkan, H.2
Brandolini, A.3
Schafer-Pregl, R.4
Martin, W.5
-
21
-
-
57149091739
-
Mining and Harnessing Natural Variation: A Little MAGIC
-
Johal GS, Balint-Kurti P, Well CF, (2008) Mining and Harnessing Natural Variation: A Little MAGIC. Crop Sci 48: 2066-2073.
-
(2008)
Crop Sci
, vol.48
, pp. 2066-2073
-
-
Johal, G.S.1
Balint-Kurti, P.2
Well, C.F.3
-
22
-
-
33746383993
-
Quantitative trait analysis of seed yield and other complex traits in hybrid spring rapeseed (Brassica napus L.): 2. Identification of alleles from unadapted germplasm
-
Udall JA, Quijada PA, Lambert B, Osborn TC, (2006) Quantitative trait analysis of seed yield and other complex traits in hybrid spring rapeseed (Brassica napus L.): 2. Identification of alleles from unadapted germplasm. Theor Appl Genet 113: 597-609.
-
(2006)
Theor Appl Genet
, vol.113
, pp. 597-609
-
-
Udall, J.A.1
Quijada, P.A.2
Lambert, B.3
Osborn, T.C.4
-
23
-
-
32544437516
-
Quantitative trait loci for yield and related traits in the wheat population Ning7840×Clark
-
Marza F, Bai GH, Carver BF, Zhou WC, (2006) Quantitative trait loci for yield and related traits in the wheat population Ning7840×Clark. Theor Appl Genet 112: 688-698.
-
(2006)
Theor Appl Genet
, vol.112
, pp. 688-698
-
-
Marza, F.1
Bai, G.H.2
Carver, B.F.3
Zhou, W.C.4
-
24
-
-
33746220449
-
Identification, isolation and pyramiding of quantitative trait loci for rice breeding
-
Ashikari M, Matsuoka M, (2006) Identification, isolation and pyramiding of quantitative trait loci for rice breeding. Trends Plant Sci 11: 344-350.
-
(2006)
Trends Plant Sci
, vol.11
, pp. 344-350
-
-
Ashikari, M.1
Matsuoka, M.2
-
25
-
-
0344005444
-
Identification of quantitative trait loci for yield and yield components in an advanced backcross population derived from the Oryza sativa variety IR64 and the wild relative O-rufipogon
-
Septiningsih EM, Prasetiyono J, Lubis E, Tai TH, Tjubaryat T, et al. (2003) Identification of quantitative trait loci for yield and yield components in an advanced backcross population derived from the Oryza sativa variety IR64 and the wild relative O-rufipogon. Theor Appl Genet 107: 1419-1432.
-
(2003)
Theor Appl Genet
, vol.107
, pp. 1419-1432
-
-
Septiningsih, E.M.1
Prasetiyono, J.2
Lubis, E.3
Tai, T.H.4
Tjubaryat, T.5
-
26
-
-
0043210319
-
Advanced backcross QTL analysis in barley (Hordeum vulgare L.)
-
Pillen K, Zacharias A, Leon J, (2003) Advanced backcross QTL analysis in barley (Hordeum vulgare L.). Theor Appl Genet 107: 340-352.
-
(2003)
Theor Appl Genet
, vol.107
, pp. 340-352
-
-
Pillen, K.1
Zacharias, A.2
Leon, J.3
-
27
-
-
0038532165
-
Introgression of a quantitative trait locus for yield from Glycine soja into commercial soybean cultivars
-
Concibido VC, La Vallee B, McLaird P, Pineda N, Meyer J, et al. (2003) Introgression of a quantitative trait locus for yield from Glycine soja into commercial soybean cultivars. Theor Appl Genet 106: 575-582.
-
(2003)
Theor Appl Genet
, vol.106
, pp. 575-582
-
-
Concibido, V.C.1
La Vallee, B.2
McLaird, P.3
Pineda, N.4
Meyer, J.5
-
28
-
-
37249066099
-
Linkage mapping of domestication loci in a large maize-teosinte backcross resource
-
Briggs WH, McMullen MD, Gaut BS, Doebley J, (2007) Linkage mapping of domestication loci in a large maize-teosinte backcross resource. Genetics 177: 1915-1928.
-
(2007)
Genetics
, vol.177
, pp. 1915-1928
-
-
Briggs, W.H.1
McMullen, M.D.2
Gaut, B.S.3
Doebley, J.4
-
29
-
-
33645419561
-
QTL analysis of yield traits in an advanced backcross population derived from a cultivated Andean×wild common bean (Phaseolus vulgaris L.) cross
-
Blair MW, Iriarte G, Beebe S, (2006) QTL analysis of yield traits in an advanced backcross population derived from a cultivated Andean×wild common bean (Phaseolus vulgaris L.) cross. Theor Appl Genet 112: 1149-1163.
-
(2006)
Theor Appl Genet
, vol.112
, pp. 1149-1163
-
-
Blair, M.W.1
Iriarte, G.2
Beebe, S.3
-
30
-
-
0012941651
-
Mapping of yield-related QTLs in pepper in an interspecific cross of Capsicum annuum and C-frutescens
-
Rao GU, Ben Chaim A, Borovsky Y, Paran I, (2003) Mapping of yield-related QTLs in pepper in an interspecific cross of Capsicum annuum and C-frutescens. Theor Appl Genet 106: 1457-1466.
-
(2003)
Theor Appl Genet
, vol.106
, pp. 1457-1466
-
-
Rao, G.U.1
Ben, C.A.2
Borovsky, Y.3
Paran, I.4
-
31
-
-
0038543123
-
Quantitative traits in plants: beyond the QTL
-
Paran I, Zamir D, (2003) Quantitative traits in plants: beyond the QTL. Trends Genet 19: 303-306.
-
(2003)
Trends Genet
, vol.19
, pp. 303-306
-
-
Paran, I.1
Zamir, D.2
-
33
-
-
20444391743
-
To clone or not to clone plant QTLs: present and future challenges
-
Salvi S, Tuberosa R, (2005) To clone or not to clone plant QTLs: present and future challenges. Trends Plant Sci 10: 297-304.
-
(2005)
Trends Plant Sci
, vol.10
, pp. 297-304
-
-
Salvi, S.1
Tuberosa, R.2
-
34
-
-
34447570857
-
Application of a metabolomic method combining one-dimensional and two-dimensional gas chromatography-time-of-flight/mass spectrometry to metabolic phenotyping of natural variants in rice
-
Kusano M, Fukushima A, Kobayashi M, Hayashi N, Jonsson P, et al. (2007) Application of a metabolomic method combining one-dimensional and two-dimensional gas chromatography-time-of-flight/mass spectrometry to metabolic phenotyping of natural variants in rice. J Chromatgr B 855: 71-79.
-
(2007)
J Chromatgr B
, vol.855
, pp. 71-79
-
-
Kusano, M.1
Fukushima, A.2
Kobayashi, M.3
Hayashi, N.4
Jonsson, P.5
-
35
-
-
48249152281
-
Mode of inheritance of primary metabolic traits in tomato
-
Schauer N, Semel Y, Balbo I, Steinfath M, Repsilber D, et al. (2008) Mode of inheritance of primary metabolic traits in tomato. Plant Cell 20: 509-523.
-
(2008)
Plant Cell
, vol.20
, pp. 509-523
-
-
Schauer, N.1
Semel, Y.2
Balbo, I.3
Steinfath, M.4
Repsilber, D.5
-
36
-
-
34247897150
-
Development of a near-isogenic line population of Arabidopsis thaliana and comparison of mapping power with a recombinant inbred line population
-
Keurentjes JJB, Bentsink L, Alonso-Blanco C, Hanhart CJ, Vries HBD, et al. (2007) Development of a near-isogenic line population of Arabidopsis thaliana and comparison of mapping power with a recombinant inbred line population. Genetics 175: 891-905.
-
(2007)
Genetics
, vol.175
, pp. 891-905
-
-
Keurentjes, J.J.B.1
Bentsink, L.2
Alonso-Blanco, C.3
Hanhart, C.J.4
Vries, H.B.D.5
-
37
-
-
0037967209
-
Analysis of natural allelic variation at seed dormancy loci of Arabidopsis thaliana
-
Alonso-Blanco C, Bentsink L, Hanhart CJ, Vries HBE, Koornneef M, (2003) Analysis of natural allelic variation at seed dormancy loci of Arabidopsis thaliana. Genetics 164: 711-729.
-
(2003)
Genetics
, vol.164
, pp. 711-729
-
-
Alonso-Blanco, C.1
Bentsink, L.2
Hanhart, C.J.3
Vries, H.B.E.4
Koornneef, M.5
-
38
-
-
33750957114
-
Cloning of DOG1, a quantitative trait locus controlling seed dormancy in Arabidopsis
-
Bentsink L, Jowett J, Hanhart CJ, Koornneef M, (2006) Cloning of DOG1, a quantitative trait locus controlling seed dormancy in Arabidopsis. Proc Natl Acad Sci USA 103: 17042-17047.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 17042-17047
-
-
Bentsink, L.1
Jowett, J.2
Hanhart, C.J.3
Koornneef, M.4
-
39
-
-
2442681968
-
Analysis of natural allelic variation of Arabidopsis seed germination and seed longevity traits between the accessions Landsberg erecta and Shakdara, using a new recombinant inbred line population
-
Clerkx EJM, El-Lithy ME, Vierling E, Ruys GJ, Blankestijin-De Vries H, et al. (2004) Analysis of natural allelic variation of Arabidopsis seed germination and seed longevity traits between the accessions Landsberg erecta and Shakdara, using a new recombinant inbred line population. Plant Physiol 135: 432-443.
-
(2004)
Plant Physiol
, vol.135
, pp. 432-443
-
-
Clerkx, E.J.M.1
El-Lithy, M.E.2
Vierling, E.3
Ruys, G.J.4
Blankestijin-De, V.H.5
-
40
-
-
0033667789
-
Quantitative genetic analysis of seed vigour and pre-emergence seedling growth traits in Brassica oleracea
-
Bettey M, Finch-Savage WE, King GJ, Lynn JR, (2000) Quantitative genetic analysis of seed vigour and pre-emergence seedling growth traits in Brassica oleracea. New Phytol 148: 277-286.
-
(2000)
New Phytol
, vol.148
, pp. 277-286
-
-
Bettey, M.1
Finch-Savage, W.E.2
King, G.J.3
Lynn, J.R.4
-
41
-
-
0036801489
-
Genetic architecture of NaCl tolerance in Arabidopsis
-
Quesada V, Garcia-Martinez S, Piqueras P, Ponce MR, Micol JL, (2002) Genetic architecture of NaCl tolerance in Arabidopsis. Plant Physiol 130: 951-963.
-
(2002)
Plant Physiol
, vol.130
, pp. 951-963
-
-
Quesada, V.1
Garcia-Martinez, S.2
Piqueras, P.3
Ponce, M.R.4
Micol, J.L.5
-
42
-
-
27744555074
-
QTL analysis of fruit antioxidants in tomato using Lycopersicon pennellii introgression lines
-
Rousseaux MC, Jones CM, Adams D, Chetelat R, Bennett A, et al. (2005) QTL analysis of fruit antioxidants in tomato using Lycopersicon pennellii introgression lines. Theor Appl Genet 111: 1396-1408.
-
(2005)
Theor Appl Genet
, vol.111
, pp. 1396-1408
-
-
Rousseaux, M.C.1
Jones, C.M.2
Adams, D.3
Chetelat, R.4
Bennett, A.5
-
43
-
-
77950525507
-
Salt tolerance in Solanum pennellii: antioxidant response and related QTL
-
Frary A, Gol D, Keles D, Okmen B, Pinar H, et al. (2010) Salt tolerance in Solanum pennellii: antioxidant response and related QTL. Bmc Plant Biol 10.
-
(2010)
Bmc Plant Biol
, vol.10
-
-
Frary, A.1
Gol, D.2
Keles, D.3
Okmen, B.4
Pinar, H.5
-
44
-
-
46949101924
-
Tomato fruit ascorbic acid content is linked with monodehydroascorbate reductase activity and tolerance to chilling stress
-
Stevens R, Page D, Gouble B, Garchery C, Zamir D, et al. (2008) Tomato fruit ascorbic acid content is linked with monodehydroascorbate reductase activity and tolerance to chilling stress. Plant Cell Environ 31: 1086-1096.
-
(2008)
Plant Cell Environ
, vol.31
, pp. 1086-1096
-
-
Stevens, R.1
Page, D.2
Gouble, B.3
Garchery, C.4
Zamir, D.5
-
45
-
-
0033082512
-
Seed maturation: genetic programmes and control signals
-
Wobus U, Weber H, (1999) Seed maturation: genetic programmes and control signals. Curr Opin Plant Biol 2: 33-38.
-
(1999)
Curr Opin Plant Biol
, vol.2
, pp. 33-38
-
-
Wobus, U.1
Weber, H.2
-
46
-
-
34147133691
-
Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis
-
Gutierrez RA, Lejay LV, Dean A, Chiaromonte F, Shasha DE, et al. (2007) Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis. Genome Biol 8.
-
(2007)
Genome Biol
, vol.8
-
-
Gutierrez, R.A.1
Lejay, L.V.2
Dean, A.3
Chiaromonte, F.4
Shasha, D.E.5
-
47
-
-
77950516849
-
Seed desiccation: a bridge between maturation and germination
-
Angelovici R, Galili G, Fernie AR, Fait A, (2010) Seed desiccation: a bridge between maturation and germination. Trends Plant Sci 15: 211-218.
-
(2010)
Trends Plant Sci
, vol.15
, pp. 211-218
-
-
Angelovici, R.1
Galili, G.2
Fernie, A.R.3
Fait, A.4
-
48
-
-
0034520250
-
Genetic analysis of seed-soluble oligosaccharides in relation to seed storability of Arabidopsis
-
Bentsink L, Alonso-Blanco C, Vreugdenhil D, Tesnier K, Groot SPC, et al. (2000) Genetic analysis of seed-soluble oligosaccharides in relation to seed storability of Arabidopsis. Plant Physiol 124: 1595-1604.
-
(2000)
Plant Physiol
, vol.124
, pp. 1595-1604
-
-
Bentsink, L.1
Alonso-Blanco, C.2
Vreugdenhil, D.3
Tesnier, K.4
Groot, S.P.C.5
-
50
-
-
77949815326
-
The earliest stages of adaptation in an experimental plant population: strong selection on QTLS for seed dormancy
-
Huang XQ, Schmitt J, Dorn L, Griffith C, Effgen S, et al. (2010) The earliest stages of adaptation in an experimental plant population: strong selection on QTLS for seed dormancy. Mol Ecol 19: 1335-1351.
-
(2010)
Mol Ecol
, vol.19
, pp. 1335-1351
-
-
Huang, X.Q.1
Schmitt, J.2
Dorn, L.3
Griffith, C.4
Effgen, S.5
-
51
-
-
33745580270
-
The genetics of plant metabolism
-
Keurentjes JJB, Fu JY, de Vos CHR, Lommen A, Hall RD, et al. (2006) The genetics of plant metabolism. Nat Genet 38: 842-849.
-
(2006)
Nat Genet
, vol.38
, pp. 842-849
-
-
Keurentjes, J.J.B.1
Fu, J.Y.2
de Vos, C.H.R.3
Lommen, A.4
Hall, R.D.5
-
52
-
-
52449092583
-
Integrative analyses of genetic variation in enzyme activities of primary carbohydrate metabolism reveal distinct modes of regulation in Arabidopsis thaliana
-
Keurentjes JJB, Sulpice R, Gibon Y, Steinhauser MC, Fu JY, et al. (2008) Integrative analyses of genetic variation in enzyme activities of primary carbohydrate metabolism reveal distinct modes of regulation in Arabidopsis thaliana. Genome Biol 9.
-
(2008)
Genome Biol
, vol.9
-
-
Keurentjes, J.J.B.1
Sulpice, R.2
Gibon, Y.3
Steinhauser, M.C.4
Fu, J.Y.5
-
53
-
-
64749093047
-
Regulation of de novo fatty acid synthesis in maturing oilseeds of Arabidopsis
-
Baud S, Lepiniec L, (2009) Regulation of de novo fatty acid synthesis in maturing oilseeds of Arabidopsis. Plant Physiol Bioch (Paris) 47: 448-455.
-
(2009)
Plant Physiol Bioch (Paris)
, vol.47
, pp. 448-455
-
-
Baud, S.1
Lepiniec, L.2
-
54
-
-
67649122584
-
Methodology and Significance of Microsensor-based Oxygen Mapping in Plant Seeds - an Overview
-
Rolletschek H, Stangelmayer A, Borisjuk L, (2009) Methodology and Significance of Microsensor-based Oxygen Mapping in Plant Seeds- an Overview. Sensors 9: 3218-3227.
-
(2009)
Sensors
, vol.9
, pp. 3218-3227
-
-
Rolletschek, H.1
Stangelmayer, A.2
Borisjuk, L.3
-
55
-
-
44649092841
-
Molecular networks regulating Arabidopsis seed maturation, after-ripening, dormancy and germination
-
Holdsworth MJ, Bentsink L, Soppe WJJ, (2008) Molecular networks regulating Arabidopsis seed maturation, after-ripening, dormancy and germination. New Phytol 179: 33-54.
-
(2008)
New Phytol
, vol.179
, pp. 33-54
-
-
Holdsworth, M.J.1
Bentsink, L.2
Soppe, W.J.J.3
-
56
-
-
44949165587
-
Molecular aspects of seed dormancy
-
Finkelstein R, Reeves W, Ariizumi T, Steber C, (2008) Molecular aspects of seed dormancy. Annu Rev Plant Biol 59: 387-415.
-
(2008)
Annu Rev Plant Biol
, vol.59
, pp. 387-415
-
-
Finkelstein, R.1
Reeves, W.2
Ariizumi, T.3
Steber, C.4
-
57
-
-
34547792461
-
Impact of genetics and environment on nutritional and metabolite components of maize grain
-
Harrigan GG, Stork LG, Riordan SG, Reynolds TL, Ridley WP, et al. (2007) Impact of genetics and environment on nutritional and metabolite components of maize grain. J Agr Food Chem 55: 6177-6185.
-
(2007)
J Agr Food Chem
, vol.55
, pp. 6177-6185
-
-
Harrigan, G.G.1
Stork, L.G.2
Riordan, S.G.3
Reynolds, T.L.4
Ridley, W.P.5
-
58
-
-
78249251734
-
The influence of fruit load on the tomato pericarp metabolome in a Solanum chmielewskii introgression line population
-
Do PT, Prudent M, Sulpice R, Causse M, Fernie AR, (2010) The influence of fruit load on the tomato pericarp metabolome in a Solanum chmielewskii introgression line population. Plant Physiol 154: 1128-1142.
-
(2010)
Plant Physiol
, vol.154
, pp. 1128-1142
-
-
Do, P.T.1
Prudent, M.2
Sulpice, R.3
Causse, M.4
Fernie, A.R.5
-
59
-
-
0028846653
-
An introgression line population of Lycopersicon Pennellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL
-
Eshed Y, Zamir D, (1995) An introgression line population of Lycopersicon Pennellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL. Genetics 141: 1147-1162.
-
(1995)
Genetics
, vol.141
, pp. 1147-1162
-
-
Eshed, Y.1
Zamir, D.2
-
60
-
-
0035105106
-
Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems
-
Roessner U, Luedemann A, Brust D, Fiehn O, Linke T, et al. (2001) Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems. Plant Cell 13: 11-29.
-
(2001)
Plant Cell
, vol.13
, pp. 11-29
-
-
Roessner, U.1
Luedemann, A.2
Brust, D.3
Fiehn, O.4
Linke, T.5
-
61
-
-
34248580879
-
Gas chromatography mass spectrometry-based metabolite profiling in plants
-
Lisec J, Schauer N, Kopka J, Willmitzer L, Fernie AR, (2006) Gas chromatography mass spectrometry-based metabolite profiling in plants. Nat Protoc 1: 387-396.
-
(2006)
Nat Protoc
, vol.1
, pp. 387-396
-
-
Lisec, J.1
Schauer, N.2
Kopka, J.3
Willmitzer, L.4
Fernie, A.R.5
-
62
-
-
37849054223
-
Highway or byway: the metabolic role of the GABA shunt in plants
-
Fait A, Fromm H, Walter D, Galili G, Fernie AR, (2008) Highway or byway: the metabolic role of the GABA shunt in plants. Trends Plant Sci 13: 14-19.
-
(2008)
Trends Plant Sci
, vol.13
, pp. 14-19
-
-
Fait, A.1
Fromm, H.2
Walter, D.3
Galili, G.4
Fernie, A.R.5
-
63
-
-
78649715865
-
The Complex Genetic Architecture of the Metabolome
-
doi:10.1371/journal.pgen.1001198
-
Chan EKF, Rowe HC, Hansen BG, Kliebenstein DJ, (2010) The Complex Genetic Architecture of the Metabolome. PLoS Genet 6: e1001198 doi:10.1371/journal.pgen.1001198.
-
(2010)
PLoS Genet
, vol.6
-
-
Chan, E.K.F.1
Rowe, H.C.2
Hansen, B.G.3
Kliebenstein, D.J.4
-
64
-
-
0037119587
-
Stochastic gene expression in a single cell
-
Elowitz MB, Levine AJ, Siggia ED, Swain PS, (2002) Stochastic gene expression in a single cell. Science 297: 1183-1186.
-
(2002)
Science
, vol.297
, pp. 1183-1186
-
-
Elowitz, M.B.1
Levine, A.J.2
Siggia, E.D.3
Swain, P.S.4
-
65
-
-
2942718723
-
Control of stochasticity in eukaryotic gene expression
-
Raser JM, O'Shea EK, (2004) Control of stochasticity in eukaryotic gene expression. Science 304: 1811-1814.
-
(2004)
Science
, vol.304
, pp. 1811-1814
-
-
Raser, J.M.1
O'Shea, E.K.2
-
66
-
-
46649113144
-
A Role for Gene Duplication and Natural Variation of Gene Expression in the Evolution of Metabolism
-
doi:10.1371/journal.pone.0001838
-
Kliebenstein DJ, (2008) A Role for Gene Duplication and Natural Variation of Gene Expression in the Evolution of Metabolism. PLoS ONE 3: e1838 doi:10.1371/journal.pone.0001838.
-
(2008)
PLoS ONE
, vol.3
-
-
Kliebenstein, D.J.1
-
67
-
-
79959350055
-
Genome-wide network model capturing seed germination reveals coordinated regulation of plant cellular phase transitions
-
Bassel GW, Lan H, Glaab E, Gibbs DJ, Gerjets T, et al. (2011) Genome-wide network model capturing seed germination reveals coordinated regulation of plant cellular phase transitions. Proc Natl Acad Sci USA 108: 9709-9714.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 9709-9714
-
-
Bassel, G.W.1
Lan, H.2
Glaab, E.3
Gibbs, D.J.4
Gerjets, T.5
-
68
-
-
84859247881
-
Functional network construction in Arabidopsis using rule-based machine Learning on large-scale data sets
-
Enrico BasselGWG, Marquez Julietta, Holdsworth MichaelJ, Bacardit Jaume, (2011) Functional network construction in Arabidopsis using rule-based machine Learning on large-scale data sets. Plant Cell pp. 17.
-
(2011)
Plant Cell
, pp. 17
-
-
Enrico, B.G.W.G.1
Marquez, J.2
Holdsworth, M.J.3
Bacardit, J.4
-
69
-
-
77952002600
-
Enzyme Activity Profiles during Fruit Development in Tomato Cultivars and Solanum pennellii
-
Steinhauser MC, Steinhauser D, Koehl K, Carrari F, Gibon Y, et al. (2010) Enzyme Activity Profiles during Fruit Development in Tomato Cultivars and Solanum pennellii. Plant Physiol 153: 80-98.
-
(2010)
Plant Physiol
, vol.153
, pp. 80-98
-
-
Steinhauser, M.C.1
Steinhauser, D.2
Koehl, K.3
Carrari, F.4
Gibon, Y.5
-
70
-
-
33745659674
-
Combined transcript and metabolite profiling of Arabidopsis leaves reveals fundamental effects of the thiol-disulfide status on plant metabolism
-
Kolbe A, Oliver SN, Fernie AR, Stitt M, van Dongen JT, et al. (2006) Combined transcript and metabolite profiling of Arabidopsis leaves reveals fundamental effects of the thiol-disulfide status on plant metabolism. Plant Physiol 141: 412-422.
-
(2006)
Plant Physiol
, vol.141
, pp. 412-422
-
-
Kolbe, A.1
Oliver, S.N.2
Fernie, A.R.3
Stitt, M.4
van Dongen, J.T.5
-
71
-
-
0029558179
-
Seed and vascular expression of a high-affinity transporter for cationic amino acids in Arabidopsis
-
Frommer WB, Hummel S, Unseld M, Ninnemann O, (1995) Seed and vascular expression of a high-affinity transporter for cationic amino acids in Arabidopsis. Proc Natl Acad Sci USA 92: 12036-12040.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 12036-12040
-
-
Frommer, W.B.1
Hummel, S.2
Unseld, M.3
Ninnemann, O.4
-
73
-
-
33751093050
-
Arabidopsis seed development and germination is associated with temporally distinct metabolic switches
-
Fait A, Angelovici R, Less H, Ohad I, Urbanczyk-Wochniak E, et al. (2006) Arabidopsis seed development and germination is associated with temporally distinct metabolic switches. Plant Physiol 142: 839-854.
-
(2006)
Plant Physiol
, vol.142
, pp. 839-854
-
-
Fait, A.1
Angelovici, R.2
Less, H.3
Ohad, I.4
Urbanczyk-Wochniak, E.5
-
74
-
-
57749121318
-
Reconfiguration of the achene and receptacle metabolic networks during strawberry fruit development
-
Fait A, Hanhineva K, Beleggia R, Dai N, Rogachev I, et al. (2008) Reconfiguration of the achene and receptacle metabolic networks during strawberry fruit development. Plant Physiol 148: 730-750.
-
(2008)
Plant Physiol
, vol.148
, pp. 730-750
-
-
Fait, A.1
Hanhineva, K.2
Beleggia, R.3
Dai, N.4
Rogachev, I.5
-
75
-
-
51249109670
-
Increasing amino acid supply in pea embryos reveals specific interactions of N and C metabolism, and highlights the importance of mitochondrial metabolism
-
Weigelt K, Kuster H, Radchuk R, Muller M, Weichert H, et al. (2008) Increasing amino acid supply in pea embryos reveals specific interactions of N and C metabolism, and highlights the importance of mitochondrial metabolism. Plant J 55: 909-926.
-
(2008)
Plant J
, vol.55
, pp. 909-926
-
-
Weigelt, K.1
Kuster, H.2
Radchuk, R.3
Muller, M.4
Weichert, H.5
-
76
-
-
71049156621
-
Deciphering Transcriptional and Metabolic Networks Associated with Lysine Metabolism during Arabidopsis Seed Development
-
Angelovici R, Fait A, Zhu XH, Szymanski J, Feldmesser E, et al. (2009) Deciphering Transcriptional and Metabolic Networks Associated with Lysine Metabolism during Arabidopsis Seed Development. Plant Physiol 151: 2058-2072.
-
(2009)
Plant Physiol
, vol.151
, pp. 2058-2072
-
-
Angelovici, R.1
Fait, A.2
Zhu, X.H.3
Szymanski, J.4
Feldmesser, E.5
-
77
-
-
78649730781
-
A seed high-lysine trait is negatively associated with the TCA cycle and slows down Arabidopsis seed germination
-
Angelovici R, Fait A, Fernie AR, Galili G, (2011) A seed high-lysine trait is negatively associated with the TCA cycle and slows down Arabidopsis seed germination. New Phytol 189: 148-159.
-
(2011)
New Phytol
, vol.189
, pp. 148-159
-
-
Angelovici, R.1
Fait, A.2
Fernie, A.R.3
Galili, G.4
-
78
-
-
80455173619
-
Targeted enhancement of glutamate to γ-aminobutyrate conversion in Arabidopsis seeds affects C-N balance and storage reserves in a development-dependent manner
-
Fait A, Nunes-Nesi A, Angelovici R, Lehman M, Pham P, et al. (2011) Targeted enhancement of glutamate to γ-aminobutyrate conversion in Arabidopsis seeds affects C-N balance and storage reserves in a development-dependent manner. Plant Physiol 157: 1026-1042.
-
(2011)
Plant Physiol
, vol.157
, pp. 1026-1042
-
-
Fait, A.1
Nunes-Nesi, A.2
Angelovici, R.3
Lehman, M.4
Pham, P.5
-
79
-
-
0036333115
-
A pea seed mutant affected in the differentiation of the embryonic epidermis is impaired in embryo growth and seed maturation
-
Borisjuk L, Wang TL, Rolletschek H, Wobus U, Weber H, (2002) A pea seed mutant affected in the differentiation of the embryonic epidermis is impaired in embryo growth and seed maturation. Development 129: 1595-1607.
-
(2002)
Development
, vol.129
, pp. 1595-1607
-
-
Borisjuk, L.1
Wang, T.L.2
Rolletschek, H.3
Wobus, U.4
Weber, H.5
-
80
-
-
3242725152
-
Seed development and differentiation: A role for metabolic regulation
-
Borisjuk L, Rolletschek H, Radchuk R, Weschke W, Wobus U, et al. (2004) Seed development and differentiation: A role for metabolic regulation. Plant Biol 6: 375-386.
-
(2004)
Plant Biol
, vol.6
, pp. 375-386
-
-
Borisjuk, L.1
Rolletschek, H.2
Radchuk, R.3
Weschke, W.4
Wobus, U.5
-
81
-
-
20444375868
-
Molecular physiology of legume seed development
-
Weber H, Borisjuk L, Wobus U, (2005) Molecular physiology of legume seed development. Annu Rev Plant Biol 56: 253-279.
-
(2005)
Annu Rev Plant Biol
, vol.56
, pp. 253-279
-
-
Weber, H.1
Borisjuk, L.2
Wobus, U.3
-
82
-
-
54149090305
-
Biochemical networks and epistasis shape the Arabidopsis thaliana metabolome
-
Rowe HC, Hansen BG, Halkier BA, Kliebenstein DJ, (2008) Biochemical networks and epistasis shape the Arabidopsis thaliana metabolome. Plant Cell 20: 1199-1216.
-
(2008)
Plant Cell
, vol.20
, pp. 1199-1216
-
-
Rowe, H.C.1
Hansen, B.G.2
Halkier, B.A.3
Kliebenstein, D.J.4
-
83
-
-
0242607632
-
Parallel analysis of transcript and metabolic profiles: a new approach in systems biology
-
Urbanczyk-Wochniak E, Luedemann A, Kopka J, Selbig J, Roessner-Tunali U, et al. (2003) Parallel analysis of transcript and metabolic profiles: a new approach in systems biology. Embo Rep 4: 989-993.
-
(2003)
Embo Rep
, vol.4
, pp. 989-993
-
-
Urbanczyk-Wochniak, E.1
Luedemann, A.2
Kopka, J.3
Selbig, J.4
Roessner-Tunali, U.5
-
84
-
-
0035201029
-
High-resolution metabolic phenotyping of genetically and environmentally diverse potato tuber systems. Identification of phenocopies
-
Roessner U, Willmitzer L, Fernie AR, (2001) High-resolution metabolic phenotyping of genetically and environmentally diverse potato tuber systems. Identification of phenocopies. Plant Physiol 127: 749-764.
-
(2001)
Plant Physiol
, vol.127
, pp. 749-764
-
-
Roessner, U.1
Willmitzer, L.2
Fernie, A.R.3
-
85
-
-
50649123292
-
Genotype, age, tissue, and environment regulate the structural outcome of glucosinolate activation
-
Wentzell AM, Kliebenstein DJ, (2008) Genotype, age, tissue, and environment regulate the structural outcome of glucosinolate activation. Plant Physiol 147: 415-428.
-
(2008)
Plant Physiol
, vol.147
, pp. 415-428
-
-
Wentzell, A.M.1
Kliebenstein, D.J.2
-
86
-
-
0032720694
-
The dual function of sugar carriers: Transport and sugar sensing
-
Lalonde S, Boles E, Hellmann H, Barker L, Patrick JW, et al. (1999) The dual function of sugar carriers: Transport and sugar sensing. Plant Cell 11: 707-726.
-
(1999)
Plant Cell
, vol.11
, pp. 707-726
-
-
Lalonde, S.1
Boles, E.2
Hellmann, H.3
Barker, L.4
Patrick, J.W.5
-
87
-
-
12444310242
-
Gene function beyond the single trait: natural variation, gene effects, and evolutionary ecology in Arabidopsis thaliana
-
Tonsor SJ, Alonso-Blanco C, Koornneef M, (2005) Gene function beyond the single trait: natural variation, gene effects, and evolutionary ecology in Arabidopsis thaliana. Plant Cell Environ 28: 2-20.
-
(2005)
Plant Cell Environ
, vol.28
, pp. 2-20
-
-
Tonsor, S.J.1
Alonso-Blanco, C.2
Koornneef, M.3
-
88
-
-
76449104815
-
Broad connections in the Arabidopsis seed metabolic network revealed by metabolite profiling of an amino acid catabolism mutant
-
Gu LP, Jones AD, Last RL, (2010) Broad connections in the Arabidopsis seed metabolic network revealed by metabolite profiling of an amino acid catabolism mutant. Plant J 61: 579-590.
-
(2010)
Plant J
, vol.61
, pp. 579-590
-
-
Gu, L.P.1
Jones, A.D.2
Last, R.L.3
-
89
-
-
61649106952
-
Coordinations between gene modules control the operation of plant amino acid metabolic networks
-
Less H, Galili G, (2009) Coordinations between gene modules control the operation of plant amino acid metabolic networks. Bmc Syst Biol 3.
-
(2009)
Bmc Syst Biol
, vol.3
-
-
Less, H.1
Galili, G.2
-
90
-
-
78650003309
-
Principal transcriptional regulation and genome-wide system interactions of the Asp-family and aromatic amino acid networks of amino acid metabolism in plants
-
Less H, Angelovici R, Tzin V, Galili G, (2010) Principal transcriptional regulation and genome-wide system interactions of the Asp-family and aromatic amino acid networks of amino acid metabolism in plants. Amino Acids 39: 1023-1028.
-
(2010)
Amino Acids
, vol.39
, pp. 1023-1028
-
-
Less, H.1
Angelovici, R.2
Tzin, V.3
Galili, G.4
-
91
-
-
0033982936
-
KEGG: Kyoto Encyclopedia of Genes and Genomes
-
Kanehisa M, Goto S, (2000) KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Res 28: 27-30.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 27-30
-
-
Kanehisa, M.1
Goto, S.2
-
92
-
-
33644874819
-
From genomics to chemical genomics: new developments in KEGG
-
Kanehisa M, Goto S, Hattori M, Aoki-Kinoshita KF, Itoh M, et al. (2006) From genomics to chemical genomics: new developments in KEGG. Nucleic Acids Res 34: D354-D357.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Kanehisa, M.1
Goto, S.2
Hattori, M.3
Aoki-Kinoshita, K.F.4
Itoh, M.5
-
93
-
-
75549090213
-
KEGG for representation and analysis of molecular networks involving diseases and drugs
-
Kanehisa M, Goto S, Furumichi M, Tanabe M, Hirakawa M, (2010) KEGG for representation and analysis of molecular networks involving diseases and drugs. Nucleic Acids Res 38: D355-D360.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Kanehisa, M.1
Goto, S.2
Furumichi, M.3
Tanabe, M.4
Hirakawa, M.5
-
94
-
-
0038742865
-
From measurements of metabolites to metabolomics: an 'on the fly' perspective illustrated by recent studies of carbon-nitrogen interactions
-
Stitt M, Fernie AR, (2003) From measurements of metabolites to metabolomics: an 'on the fly' perspective illustrated by recent studies of carbon-nitrogen interactions. Curr Opin Biotech 14: 136-144.
-
(2003)
Curr Opin Biotech
, vol.14
, pp. 136-144
-
-
Stitt, M.1
Fernie, A.R.2
-
95
-
-
78649761413
-
Metabolic and Signaling Aspects Underpinning the Regulation of Plant Carbon Nitrogen Interactions
-
Nunes-Nesi A, Fernie AR, Stitt M, (2010) Metabolic and Signaling Aspects Underpinning the Regulation of Plant Carbon Nitrogen Interactions. Mol Plant 3: 973-996.
-
(2010)
Mol Plant
, vol.3
, pp. 973-996
-
-
Nunes-Nesi, A.1
Fernie, A.R.2
Stitt, M.3
-
96
-
-
14844337487
-
Genome-wide profiling of stored mRNA in Arabidopsis thaliana seed germination: epigenetic and genetic regulation of transcription in seed
-
Nakabayashi K, Okamoto M, Koshiba T, Kamiya Y, Nambara E, (2005) Genome-wide profiling of stored mRNA in Arabidopsis thaliana seed germination: epigenetic and genetic regulation of transcription in seed. Plant J 41: 697-709.
-
(2005)
Plant J
, vol.41
, pp. 697-709
-
-
Nakabayashi, K.1
Okamoto, M.2
Koshiba, T.3
Kamiya, Y.4
Nambara, E.5
-
97
-
-
0141787875
-
Metabolic profiling of transgenic tomato plants overexpressing hexokinase reveals that the influence of hexose phosphorylation diminishes during fruit development
-
Roessner-Tunali U, Hegemann B, Lytovchenko A, Carrari F, Bruedigam C, et al. (2003) Metabolic profiling of transgenic tomato plants overexpressing hexokinase reveals that the influence of hexose phosphorylation diminishes during fruit development. Plant Physiol 133: 84-99.
-
(2003)
Plant Physiol
, vol.133
, pp. 84-99
-
-
Roessner-Tunali, U.1
Hegemann, B.2
Lytovchenko, A.3
Carrari, F.4
Bruedigam, C.5
-
98
-
-
38349164409
-
Computing topological parameters of biological networks
-
Assenov Y, Ramirez F, Schelhorn SE, Lengauer T, Albrecht M, (2008) Computing topological parameters of biological networks. Bioinformatics 24: 282-284.
-
(2008)
Bioinformatics
, vol.24
, pp. 282-284
-
-
Assenov, Y.1
Ramirez, F.2
Schelhorn, S.E.3
Lengauer, T.4
Albrecht, M.5
-
99
-
-
84889350276
-
Global Network Properties
-
In: Junker BH, Schreiber F, editors, New Jersey, US, Wiley Series
-
Steuer R, Lopez GZ, (2008) Global Network Properties. In: Junker BH, Schreiber F, editors. Analysis of Biological Networks New Jersey, US Wiley Series pp. 29-59.
-
(2008)
Analysis of Biological Networks
, pp. 29-59
-
-
Steuer, R.1
Lopez, G.Z.2
|