-
1
-
-
45149092121
-
Are Archaea inherently less diverse than Bacteria in the same environments?
-
Aller, J.Y., and P.F. Kemp. 2008. Are Archaea inherently less diverse than Bacteria in the same environments? FEMS Microbiol. Ecol. 65:74-87.
-
(2008)
FEMS Microbiol. Ecol
, vol.65
, pp. 74-87
-
-
Aller, J.Y.1
Kemp, P.F.2
-
2
-
-
33646571506
-
Diversity and seasonal dynamics of Actinobacteria in four lakes in Northeastern Germany
-
Allgaier, M., and H.-P. Grossart. 2006. Diversity and seasonal dynamics of Actinobacteria in four lakes in Northeastern Germany. Appl. Environ. Microbiol. 72:3489-3497.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 3489-3497
-
-
Allgaier, M.1
Grossart, H.-P.2
-
3
-
-
33748662871
-
Degradation of Microcystin-RR by Sphingomonas sp. CBA4 isolated from San Roque reservoir (Córdoba-Argentina)
-
Amé, M.V., J.R. Echenique, S. Pflugmacher, and D.A. Wunderlin. 2006. Degradation of Microcystin-RR by Sphingomonas sp. CBA4 isolated from San Roque reservoir (Córdoba-Argentina). Biodegradation 17:447-455.
-
(2006)
Biodegradation
, vol.17
, pp. 447-455
-
-
Amé, M.V.1
Echenique, J.R.2
Pflugmacher, S.3
Wunderlin, D.A.4
-
4
-
-
76349125984
-
Global ecological patterns in uncultured Archaea
-
Auguet, J.-C., A. Barberan, and E.O. Casamayor. 2009. Global ecological patterns in uncultured Archaea. ISME J. 4:182-190.
-
(2009)
ISME J
, vol.4
, pp. 182-190
-
-
Auguet, J.-C.1
Barberan, A.2
Casamayor, E.O.3
-
5
-
-
77954288795
-
Global phylogenetic community structure and β-diversity patterns in surface bacterioplankton metacommunities
-
Barberán, A., and E.O. Casamayor. 2010. Global phylogenetic community structure and β-diversity patterns in surface bacterioplankton metacommunities. Aquat. Microb. Ecol. 59:1-10.
-
(2010)
Aquat. Microb. Ecol
, vol.59
, pp. 1-10
-
-
Barberán, A.1
Casamayor, E.O.2
-
6
-
-
84858771494
-
Diversity and function of archaea in freshwater habitats
-
Bomberg, M., L. Montonen, U. Münster, and G. Jurgens. 2008. Diversity and function of archaea in freshwater habitats. Curr. Trends Microbiol. 4:1-89.
-
(2008)
Curr. Trends Microbiol
, vol.4
, pp. 1-89
-
-
Bomberg, M.1
Montonen, L.2
Münster, U.3
Jurgens, G.4
-
7
-
-
0033987945
-
Bacterial diversity and community composition in the chemocline of the meromictic alpine Lake Cadagno as revealed by 16S rDNA analysis
-
Bosshard, P.P., Y. Santini, D. Grüter, R. Stettler, and R. Bachofen. 2000. Bacterial diversity and community composition in the chemocline of the meromictic alpine Lake Cadagno as revealed by 16S rDNA analysis. FEMS Microbiol. Ecol. 31:173-182.
-
(2000)
FEMS Microbiol. Ecol
, vol.31
, pp. 173-182
-
-
Bosshard, P.P.1
Santini, Y.2
Grüter, D.3
Stettler, R.4
Bachofen, R.5
-
8
-
-
0242657623
-
Members of a readily enriched β-Proteobacterial clade are common in surface waters of a humic lake
-
Burkert, U., F. Warnecke, D. Babenzien, E. Zwirnmann, and J. Pernthaler. 2003. Members of a readily enriched β-Proteobacterial clade are common in surface waters of a humic lake. Appl. Environ. Microbiol. 69:6550-6559.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 6550-6559
-
-
Burkert, U.1
Warnecke, F.2
Babenzien, D.3
Zwirnmann, E.4
Pernthaler, J.5
-
9
-
-
70449408503
-
Bacteria, Archaea and Crenarchaeota in the Epilimnion and Hypolimnion of a Deep Holo-Oligomictic Lake
-
Callieri, C., G. Corno, E. Caravati, S. Rasconi, M. Contesini, and R. Bertoni. 2009. Bacteria, Archaea and Crenarchaeota in the Epilimnion and Hypolimnion of a Deep Holo-Oligomictic Lake. Appl. Environ. Microbiol. 75:7298-7300.
-
(2009)
Appl. Environ. Microbiol
, vol.75
, pp. 7298-7300
-
-
Callieri, C.1
Corno, G.2
Caravati, E.3
Rasconi, S.4
Contesini, M.5
Bertoni, R.6
-
10
-
-
10044278979
-
Composition of freshwater bacterial communities associated with cyanobacterial blooms in four Swedish lakes
-
Eiler, A., and S. Bertilsson. 2004. Composition of freshwater bacterial communities associated with cyanobacterial blooms in four Swedish lakes. Environ. Microbiol. 6:1228-1243.
-
(2004)
Environ. Microbiol
, vol.6
, pp. 1228-1243
-
-
Eiler, A.1
Bertilsson, S.2
-
11
-
-
34249879036
-
Flavobacteria Blooms in four Eutrophic Lakes: Linking population dynamics of freshwater Bacterioplankton to resource availability
-
Eiler, A., and S. Bertilsson. 2007. Flavobacteria Blooms in four Eutrophic Lakes: Linking population dynamics of freshwater Bacterioplankton to resource availability. Appl. Environ. Microbiol. 73:3511-3518.
-
(2007)
Appl. Environ. Microbiol
, vol.73
, pp. 3511-3518
-
-
Eiler, A.1
Bertilsson, S.2
-
12
-
-
17644439150
-
Bacterioplankton compositions of lakes and oceans: A first comparison based on fluorescence in situ hybridization
-
Glöckner, F.O., B.M. Fuchs, and R. Amann. 1999. Bacterioplankton compositions of lakes and oceans: a first comparison based on fluorescence in situ hybridization. Appl. Environ. Microbiol. 65:3721-3726.
-
(1999)
Appl. Environ. Microbiol
, vol.65
, pp. 3721-3726
-
-
Glöckner, F.O.1
Fuchs, B.M.2
Amann, R.3
-
13
-
-
0033754255
-
Comparative 16S rRNA analysis of lake Bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of Actinobacteria
-
Glöckner, F., E. Zaichikov, N. Belkova, L. Denissova, J. Pernthaler, A. Pernthaler, and R. Amann. 2000. Comparative 16S rRNA analysis of lake Bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of Actinobacteria. Appl. Environ. Microbiol. 66:5053-5065.
-
(2000)
Appl. Environ. Microbiol
, vol.66
, pp. 5053-5065
-
-
Glöckner, F.1
Zaichikov, E.2
Belkova, N.3
Denissova, L.4
Pernthaler, J.5
Pernthaler, A.6
Amann, R.7
-
14
-
-
0000803388
-
The population frequencies of species and the estimation of population parameters
-
Good, I.J. 1953. The population frequencies of species and the estimation of population parameters. Biometrika 43:45-63.
-
(1953)
Biometrika
, vol.43
, pp. 45-63
-
-
Good, I.J.1
-
15
-
-
0141816854
-
Isolation of strains belonging to the cosmopolitan Polynucleobacter necessarius cluster from freshwater habitats located in three climatic zones
-
Hahn, M.W. 2003. Isolation of strains belonging to the cosmopolitan Polynucleobacter necessarius cluster from freshwater habitats located in three climatic zones. Appl. Environ. Microbiol. 69:5248-5254.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 5248-5254
-
-
Hahn, M.W.1
-
16
-
-
34249083031
-
'Candidatus Aquirestis calciphila' and 'Candidatus Haliscomenobacter calcifugiens', filamentous, planktonic bacteria inhabiting natural lakes
-
Hahn, M.W., and M. Schauer. 2007. 'Candidatus Aquirestis calciphila' and 'Candidatus Haliscomenobacter calcifugiens', filamentous, planktonic bacteria inhabiting natural lakes. Int. J. Syst. Evol. Microbiol. 57:936-940.
-
(2007)
Int. J. Syst. Evol. Microbiol
, vol.57
, pp. 936-940
-
-
Hahn, M.W.1
Schauer, M.2
-
17
-
-
60549112907
-
Description of seven candidate species affiliated with the phylum Actinobacteria, representing planktonic freshwater bacteria
-
Hahn, M.W. 2009. Description of seven candidate species affiliated with the phylum Actinobacteria, representing planktonic freshwater bacteria. Int. J. Syst. Evol. Microbiol. 59:112-117.
-
(2009)
Int. J. Syst. Evol. Microbiol
, vol.59
, pp. 112-117
-
-
Hahn, M.W.1
-
18
-
-
34748886657
-
Past: Paleontological statistics software package for education and data analysis
-
Hammer, Ø., D.A.T. Harper, and P.D. Ryan. 2001. Past: paleontological statistics software package for education and data analysis. Palaeontol. Electron. 4:1-9.
-
(2001)
Palaeontol. Electron
, vol.4
, pp. 1-9
-
-
Hammer, Ø.1
Harper, D.A.T.2
Ryan, P.D.3
-
19
-
-
35948990899
-
Variations in spatial and temporal distribution of Archaea in the North Sea in relation to environmental variables
-
Herfort, L., S. Schouten, B. Abbas, M.J. Veldhuis, M.J.L. Coolen, C. Wuchter, J.P. Boon, G.J. Herndl, and J.S. Sinninghe Damsté. 2007. Variations in spatial and temporal distribution of Archaea in the North Sea in relation to environmental variables. FEMS Microbiol. Ecol. 62:242-257.
-
(2007)
FEMS Microbiol. Ecol
, vol.62
, pp. 242-257
-
-
Herfort, L.1
Schouten, S.2
Abbas, B.3
Veldhuis, M.J.4
Coolen, M.J.L.5
Wuchter, C.6
Boon, J.P.7
Herndl, G.J.8
Damsté, J.S.S.9
-
20
-
-
0037314132
-
Using ecological diversity measures with bacterial communities
-
Hill, T.C.J., K.A. Walsh, J.A. Harris, and B.F. Moffett. 2003. Using ecological diversity measures with bacterial communities. FEMS Microbiol. Ecol. 43:1-11.
-
(2003)
FEMS Microbiol. Ecol
, vol.43
, pp. 1-11
-
-
Hill, T.C.J.1
Walsh, K.A.2
Harris, J.A.3
Moffett, B.F.4
-
21
-
-
0037315929
-
Depth distribution of microbial diversity in Mono Lake, a meromictic soda lake in California
-
Humayoun, S.B., N. Bano, and J.T. Hollibaugh. 2003. Depth distribution of microbial diversity in Mono Lake, a meromictic soda lake in California. Appl. Environ. Microbiol. 69:1030-1042.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 1030-1042
-
-
Humayoun, S.B.1
Bano, N.2
Hollibaugh, J.T.3
-
22
-
-
69949092691
-
Evidence for structuring of bacterial community composition by organic carbon source in temperate lakes
-
Jones, S.E., R.J. Newton, and K.D. McMahon. 2009. Evidence for structuring of bacterial community composition by organic carbon source in temperate lakes. Environ. Microbiol. 11:2463-2472.
-
(2009)
Environ. Microbiol
, vol.11
, pp. 2463-2472
-
-
Jones, S.E.1
Newton, R.J.2
McMahon, K.D.3
-
23
-
-
84858755982
-
Effects of flushing on phytoplankton and water quality in a Mediterranean drinking-water reservoir (Marathonas Reservoir, Greece)
-
In press, Assess. doi: 10.1007/s10661-10010-11851-10663
-
Katsiapi, M., M. Moustaka-Gouni, E. Michaloudi, and K.A. Kormas. In press. Effects of flushing on phytoplankton and water quality in a Mediterranean drinking-water reservoir (Marathonas Reservoir, Greece). Environ. Monit. Assess. doi: 10.1007/s10661-10010-11851-10663.
-
Environ. Monit
-
-
Katsiapi, M.1
Moustaka-Gouni, M.2
Michaloudi, E.3
Kormas, K.A.4
-
24
-
-
0842324405
-
Bacterial diversity in aquatic and other environments: What 16S rDNA libraries can tell us
-
Kemp, P.F., and J.Y. Aller. 2004. Bacterial diversity in aquatic and other environments: what 16S rDNA libraries can tell us. FEMS Microbiol. Ecol. 47:161-177.
-
(2004)
FEMS Microbiol. Ecol
, vol.47
, pp. 161-177
-
-
Kemp, P.F.1
Aller, J.Y.2
-
25
-
-
12344309156
-
Estimating prokaryotic diversity: When are 16S rDNA libraries large enough?
-
Kemp, P.F., and J.Y. Aller. 2004. Estimating prokaryotic diversity: When are 16S rDNA libraries large enough? Limnol. Oceanogr. Methods. 2:114-125.
-
(2004)
Limnol. Oceanogr. Methods
, vol.2
, pp. 114-125
-
-
Kemp, P.F.1
Aller, J.Y.2
-
26
-
-
0036207009
-
The ecology of Cytophaga-Flavobacteria in aquatic environments
-
Kirchman, D.L. 2002. The ecology of Cytophaga-Flavobacteria in aquatic environments. FEMS Microbiol. Ecol. 39:91-100.
-
(2002)
FEMS Microbiol. Ecol
, vol.39
, pp. 91-100
-
-
Kirchman, D.L.1
-
27
-
-
25644435673
-
Isolation of an autotrophic ammonia-oxidizing marine archaeon
-
Könneke, M., A.E. Bernhard, J.R. de la Torre, C.B. Walker, J.B. Waterbury, and D.A. Stahl. 2005. Isolation of an autotrophic ammonia-oxidizing marine archaeon. Nature 437:543-546.
-
(2005)
Nature
, vol.437
, pp. 543-546
-
-
Könneke, M.1
Bernhard, A.E.2
de la Torre, J.R.3
Walker, C.B.4
Waterbury, J.B.5
Stahl, D.A.6
-
28
-
-
0038107871
-
Molecular analysis of deep subsurface microbial communities in Nankai Trough sediments (ODP Leg 190, Site 1176)
-
Kormas, K.A., D.C. Smith, V. Edgcomb, and A. Teske. 2003. Molecular analysis of deep subsurface microbial communities in Nankai Trough sediments (ODP Leg 190, Site 1176). FEMS Microbiol. Ecol. 45:115-125.
-
(2003)
FEMS Microbiol. Ecol
, vol.45
, pp. 115-125
-
-
Kormas, K.A.1
Smith, D.C.2
Edgcomb, V.3
Teske, A.4
-
29
-
-
77954458172
-
Molecular detection of potentially toxic cyanobacteria and their associated Bacteria in lake water column and sediment
-
Kormas, K.A., E. Vardaka, M. Moustaka-Gouni, V. Kontoyanni, E. Petridou, S. Gkelis, and C. Neofitou. 2010. Molecular detection of potentially toxic cyanobacteria and their associated Bacteria in lake water column and sediment. World J. Microbiol. Biotechnol. 26:1473-1482.
-
(2010)
World J. Microbiol. Biotechnol
, vol.26
, pp. 1473-1482
-
-
Kormas, K.A.1
Vardaka, E.2
Moustaka-Gouni, M.3
Kontoyanni, V.4
Petridou, E.5
Gkelis, S.6
Neofitou, C.7
-
30
-
-
79957600135
-
Morphologic and molecular analysis of bloom-forming Cyanobacteria in two eutrophic, shallow Mediterranean lakes
-
Kormas, K.A., S. Gkelis, E. Vardaka, and M. Moustaka-Gouni. 2011. Morphologic and molecular analysis of bloom-forming Cyanobacteria in two eutrophic, shallow Mediterranean lakes. Limnologica 41:167-173.
-
(2011)
Limnologica
, vol.41
, pp. 167-173
-
-
Kormas, K.A.1
Gkelis, S.2
Vardaka, E.3
Moustaka-Gouni, M.4
-
31
-
-
0001857117
-
16S/23S rRNA sequencing
-
In E. Stackebrandt, and M. Goodfellow (ed.), Wiley, New York
-
Lane, D.J. 1991. 16S/23S rRNA sequencing, p. 115-147. In E. Stackebrandt, and M. Goodfellow (ed.), Nucleic Acid Techniques in Bacterial Systematics. Wiley, New York.
-
(1991)
Nucleic Acid Techniques In Bacterial Systematics
, pp. 115-147
-
-
Lane, D.J.1
-
32
-
-
33947386687
-
Phylogenetic diversity of Archaea and Bacteria in the anoxic zone of a meromictic lake (Lake Pavin, France)
-
Lehours, A.C., P. Evans, C. Bardot, K. Joblin, and F. Gérard. 2007. Phylogenetic diversity of Archaea and Bacteria in the anoxic zone of a meromictic lake (Lake Pavin, France). Appl. Environ. Microbiol. 73:2016-2019.
-
(2007)
Appl. Environ. Microbiol
, vol.73
, pp. 2016-2019
-
-
Lehours, A.C.1
Evans, P.2
Bardot, C.3
Joblin, K.4
Gérard, F.5
-
33
-
-
0742267780
-
Influence of inlet bacteria on bacterioplankton assemblage composition in lakes of different hydraulic retention time
-
Lindström, E.S., and A.-K. Bergström. 2004. Influence of inlet bacteria on bacterioplankton assemblage composition in lakes of different hydraulic retention time. Limnol. Oceanogr. 49:125-136.
-
(2004)
Limnol. Oceanogr
, vol.49
, pp. 125-136
-
-
Lindström, E.S.1
Bergström, A.-K.2
-
34
-
-
29144463361
-
Distribution of typical freshwater bacterial groups is associated with pH, temperature, and lake water retention time
-
Lindström, E.S., M.P. Kamst-Van Agterveld, and G. Zwart. 2005. Distribution of typical freshwater bacterial groups is associated with pH, temperature, and lake water retention time. Appl. Environ. Microbiol. 71:8201-8206.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 8201-8206
-
-
Lindström, E.S.1
Kamst-van Agterveld, M.P.2
Zwart, G.3
-
35
-
-
80053599880
-
The interplay between bacterial community composition and the environment determining function of inland water bacteria
-
Lindström, E.S., X.M. Feng, W. Granéli, and E.S. Kritzberg. 2010. The interplay between bacterial community composition and the environment determining function of inland water bacteria. Limnol. Oceanogr. 55:2052-2060.
-
(2010)
Limnol. Oceanogr
, vol.55
, pp. 2052-2060
-
-
Lindström, E.S.1
Feng, X.M.2
Granéli, W.3
Kritzberg, E.S.4
-
36
-
-
53949086905
-
High archaeal richness in the water column of a freshwater sulfurous karstic lake along an interannual study
-
Llirós, M., E.O. Casamayor, and C. Carles Borrego. 2008. High archaeal richness in the water column of a freshwater sulfurous karstic lake along an interannual study. FEMS Microbiol. Ecol. 66:331-342.
-
(2008)
FEMS Microbiol. Ecol
, vol.66
, pp. 331-342
-
-
Llirós, M.1
Casamayor, E.O.2
Borrego, C.C.3
-
37
-
-
79151485835
-
Diversity of cyanobacterial phylotypes in a Mediterranean drinking water reservoir (Marathonas, Greece)
-
Lymperopoulou, D.S., K.A. Kormas, M. Moustaka-Gouni, and A.D. Karagouni. 2011. Diversity of cyanobacterial phylotypes in a Mediterranean drinking water reservoir (Marathonas, Greece). Environ. Monit. Assess. 173:155-165.
-
(2011)
Environ. Monit. Assess
, vol.173
, pp. 155-165
-
-
Lymperopoulou, D.S.1
Kormas, K.A.2
Moustaka-Gouni, M.3
Karagouni, A.D.4
-
38
-
-
24344478849
-
Water-level fluctuations in Mediterranean reservoirs: Setting a dewatering threshold as a management tool to improve water quality
-
Naselli-Flores, L., and R. Barone. 2005. Water-level fluctuations in Mediterranean reservoirs: setting a dewatering threshold as a management tool to improve water quality. Hydrobiologia 548:85-99.
-
(2005)
Hydrobiologia
, vol.548
, pp. 85-99
-
-
Naselli-Flores, L.1
Barone, R.2
-
39
-
-
36649000501
-
Phylogenetic ecology of the freshwater Actinobacteria acI lineage
-
Newton, R.J., S.E. Jones, M.R. Helmus, and K.D. McMahon. 2007. Phylogenetic ecology of the freshwater Actinobacteria acI lineage. Appl. Environ. Microbiol. 73:7169-7176.
-
(2007)
Appl. Environ. Microbiol
, vol.73
, pp. 7169-7176
-
-
Newton, R.J.1
Jones, S.E.2
Helmus, M.R.3
McMahon, K.D.4
-
40
-
-
79952369878
-
A guide to the natural history of freshwater lake Bacteria
-
Newton, R.J., S.E. Jones, A. Eiler, K.D. McMahon, and S. Bertilsson. 2011. A guide to the natural history of freshwater lake Bacteria. Microbiol. Mol. Biol. Rev. 75:14-49.
-
(2011)
Microbiol. Mol. Biol. Rev
, vol.75
, pp. 14-49
-
-
Newton, R.J.1
Jones, S.E.2
Eiler, A.3
McMahon, K.D.4
Bertilsson, S.5
-
41
-
-
40849095991
-
Bacterial community structure of acid-impacted lakes: What controls diversity?
-
Percent, S.F., M.E. Frischer, P.A. Vescio, E.B. Duffy, V. Milano, M. McLellan, B.M. Stevens, C.W. Boylen, and S.A. Nierzwicki-Bauer. 2008. Bacterial community structure of acid-impacted lakes: what controls diversity? Appl. Environ. Microbiol. 74:1856-1868.
-
(2008)
Appl. Environ. Microbiol
, vol.74
, pp. 1856-1868
-
-
Percent, S.F.1
Frischer, M.E.2
Vescio, P.A.3
Duffy, E.B.4
Milano, V.5
McLellan, M.6
Stevens, B.M.7
Boylen, C.W.8
Nierzwicki-Bauer, S.A.9
-
43
-
-
78149466172
-
Characterization of Archaeal community in contaminated and uncontaminated surface stream sediments
-
Porat, I., T.A. Vishnivetskaya, J.J. Mosher, et al. 2010. Characterization of Archaeal community in contaminated and uncontaminated surface stream sediments. Microb. Ecol. 60:784-795.
-
(2010)
Microb. Ecol
, vol.60
, pp. 784-795
-
-
Porat, I.1
Vishnivetskaya, T.A.2
Mosher, J.J.3
-
44
-
-
0042126088
-
Acidobacteria form a coherent but highly diverse group within the bacterial domain: Evidence from environmental genomics
-
Quaiser, A., T. Ochsenreiter, C. Lanz, S.C. Schuster, A.H. Treusch, J. Eck, and C. Schleper. 2003. Acidobacteria form a coherent but highly diverse group within the bacterial domain: evidence from environmental genomics. Mol. Microbiol. 50:563-575.
-
(2003)
Mol. Microbiol
, vol.50
, pp. 563-575
-
-
Quaiser, A.1
Ochsenreiter, T.2
Lanz, C.3
Schuster, S.C.4
Treusch, A.H.5
Eck, J.6
Schleper, C.7
-
45
-
-
22544483867
-
Paucibacter toxinivorans gen. nov., sp. nov., a bacterium that degrades cyclic cyanobacterial hepatotoxins microcystins and nodularin
-
Rapala, J., K.A. Berg, C. Lyra, R.M. Niemi, W. Manz, S. Suomalainen, L. Paulin, and K. Lahti. 2005. Paucibacter toxinivorans gen. nov., sp. nov., a bacterium that degrades cyclic cyanobacterial hepatotoxins microcystins and nodularin. Int. J. Syst. Evol. Microbiol. 55:1563-1568.
-
(2005)
Int. J. Syst. Evol. Microbiol
, vol.55
, pp. 1563-1568
-
-
Rapala, J.1
Berg, K.A.2
Lyra, C.3
Niemi, R.M.4
Manz, W.5
Suomalainen, S.6
Paulin, L.7
Lahti, K.8
-
46
-
-
0028165830
-
Group-specific 16S rRNA hybridization probes to describe natural communities of methanogens
-
Raskin, L., J.M. Stromley, B.E. Ritmann, and D.A. Stahl. 1994. Group-specific 16S rRNA hybridization probes to describe natural communities of methanogens. Appl. Environ. Microbiol. 60:1232-1240.
-
(1994)
Appl. Environ. Microbiol
, vol.60
, pp. 1232-1240
-
-
Raskin, L.1
Stromley, J.M.2
Ritmann, B.E.3
Stahl, D.A.4
-
47
-
-
67649145535
-
Molecular studies on the microbial diversity associated with mining-impacted Coeur d'Alene River sediments
-
Rastogi, G., R.K. Sani, B.M. Peyton, J.G. Moberly, and T.R. Ginn. 2009. Molecular studies on the microbial diversity associated with mining-impacted Coeur d'Alene River sediments. Microb. Ecol. 58:129-139.
-
(2009)
Microb. Ecol
, vol.58
, pp. 129-139
-
-
Rastogi, G.1
Sani, R.K.2
Peyton, B.M.3
Moberly, J.G.4
Ginn, T.R.5
-
48
-
-
84858755014
-
The Order Cytophagales
-
In M. Dworkin, S. Falkow, K.-H. Schleifer, E. Rosenberg, and E. Stackebrandt (ed.), Springer-Verlag, New York
-
Reichenbach, S. 2006. The Order Cytophagales, p. 549-590. In M. Dworkin, S. Falkow, K.-H. Schleifer, E. Rosenberg, and E. Stackebrandt (ed.), The Prokaryotes. A handbook on the biology of bacteria: ecophysiology, isolation, identification, applications, vol. 7. Springer-Verlag, New York.
-
(2006)
The Prokaryotes. A Handbook On the Biology of Bacteria: Ecophysiology, Isolation, Identification, Applications
, vol.7
, pp. 549-590
-
-
Reichenbach, S.1
-
49
-
-
19944385957
-
Links between phytoplankton and bacterial community dynamics in a coastal marine environment
-
Rooney-Varga, J.N., M.W. Giewat, M.C. Savin, S. Sood, M. LeGresley, and J.L. Martin. 2005. Links between phytoplankton and bacterial community dynamics in a coastal marine environment. Microb. Ecol. 49:163-175.
-
(2005)
Microb. Ecol
, vol.49
, pp. 163-175
-
-
Rooney-Varga, J.N.1
Giewat, M.W.2
Savin, M.C.3
Sood, S.4
Legresley, M.5
Martin, J.L.6
-
50
-
-
0344483898
-
The response of the microbial community of marine sediments to organic carbon input under anaerobic conditions
-
Rosselló-Mora, R., B. Thamdrup, H. Schäfer, R. Weller, and R. Amann. 1999. The response of the microbial community of marine sediments to organic carbon input under anaerobic conditions. Syst. Appl. Microbiol. 22:237-248.
-
(1999)
Syst. Appl. Microbiol
, vol.22
, pp. 237-248
-
-
Rosselló-Mora, R.1
Thamdrup, B.2
Schäfer, H.3
Weller, R.4
Amann, R.5
-
51
-
-
42549112969
-
The influence of microbial interactions on the susceptibility of Karenia spp. to algicidal bacteria
-
Roth, P.A., C.M. Mikulski, and G.J. Doucette. 2008. The influence of microbial interactions on the susceptibility of Karenia spp. to algicidal bacteria. Aquat. Microb. Ecol. 50:251-259.
-
(2008)
Aquat. Microb. Ecol
, vol.50
, pp. 251-259
-
-
Roth, P.A.1
Mikulski, C.M.2
Doucette, G.J.3
-
52
-
-
52949126446
-
Spatio-temporal niche separation of planktonic Betaproteobacteria in a oligo-mesotrophic lake
-
Salcher, M.M., J. Pernthaler, M. Zeder, R. Psenner, and T. Posch. 2008. Spatio-temporal niche separation of planktonic Betaproteobacteria in a oligo-mesotrophic lake. Environ. Microbiol. 10:2074-2086.
-
(2008)
Environ. Microbiol
, vol.10
, pp. 2074-2086
-
-
Salcher, M.M.1
Pernthaler, J.2
Zeder, M.3
Psenner, R.4
Posch, T.5
-
53
-
-
77954166042
-
Nitrogen fixation and denitrification in plankton and periphyton of the Kama River Basin watercourses
-
Saralov, A.I., V.V. Galyamina, P.G. Belyaeva, and D.V. Molkov. 2010. Nitrogen fixation and denitrification in plankton and periphyton of the Kama River Basin watercourses. Inland Water Biol. 3:112-118.
-
(2010)
Inland Water Biol
, vol.3
, pp. 112-118
-
-
Saralov, A.I.1
Galyamina, V.V.2
Belyaeva, P.G.3
Molkov, D.V.4
-
55
-
-
0035374573
-
Changes in bacterial community composition and dynamics and viral mortality rates associated with enhanced flagellate grazing in a mesoeutrophic reservoir
-
Simek, K., J. Pernthaler, M.G. Weinbauer, K. Hornák, J.R. Dolan, J. Nedoma, M. Masín, and R. Amann. 2001. Changes in bacterial community composition and dynamics and viral mortality rates associated with enhanced flagellate grazing in a mesoeutrophic reservoir. Appl. Environ. Microbiol. 67:2723-2733.
-
(2001)
Appl. Environ. Microbiol
, vol.67
, pp. 2723-2733
-
-
Simek, K.1
Pernthaler, J.2
Weinbauer, M.G.3
Hornák, K.4
Dolan, J.R.5
Nedoma, J.6
Masín, M.7
Amann, R.8
-
56
-
-
0003341851
-
Development and application of nucleic acid probes
-
In E. Stackebrandt, and M. Goodfellow (ed.), John Wiley, Chichester
-
Stahl, D.A., and R. Amann. 1991. Development and application of nucleic acid probes, p. 205-248. In E. Stackebrandt, and M. Goodfellow (ed.), Nucleic Acid Techniques in Bacterial Systematics. John Wiley, Chichester.
-
(1991)
Nucleic Acid Techniques In Bacterial Systematics
, pp. 205-248
-
-
Stahl, D.A.1
Amann, R.2
-
57
-
-
0036890190
-
Intriguing microbial diversity associated with metal-rich particles from a freshwater reservoir
-
Stein, L.Y., G. Jones, B. Alexander, K. Elmund, C. Wright-Jones, and K.H. Nealson. 2002. Intriguing microbial diversity associated with metal-rich particles from a freshwater reservoir. FEMS Microbiol. Ecol. 42:431-440.
-
(2002)
FEMS Microbiol. Ecol
, vol.42
, pp. 431-440
-
-
Stein, L.Y.1
Jones, G.2
Alexander, B.3
Elmund, K.4
Wright-Jones, C.5
Nealson, K.H.6
-
58
-
-
0002463940
-
Reservoir ecosystem functioning: Theory and application
-
In J.G. Tundisi, and M. Straškraba (ed.), Leiden, The Netherlands
-
Straškraba, M., and J.G. Tundisi. 1999. Reservoir ecosystem functioning: theory and application, p. 565-583. In J.G. Tundisi, and M. Straškraba (ed.), Theoretical Reservoir Ecology and its Applications. Backhuys Publishers, Leiden, The Netherlands.
-
(1999)
Theoretical Reservoir Ecology and Its Applications. Backhuys Publishers
, pp. 565-583
-
-
Straškraba, M.1
Tundisi, J.G.2
-
59
-
-
79958181431
-
Armatimonas rosea gen. nov., sp. nov., a Gram-negative, aerobic, chemoheterotrophic bacterium of a novel bacterial phylum, Armatimonadetes phyl. nov., formally called the candidate phylum OP10
-
Tamaki, H., Y. Tanaka, H. Matsuzawa, M. Muramatsu, X.-Y. Meng, S. Hanada, K. Mori, and Y. Kamagata. 2010. Armatimonas rosea gen. nov., sp. nov., a Gram-negative, aerobic, chemoheterotrophic bacterium of a novel bacterial phylum, Armatimonadetes phyl. nov., formally called the candidate phylum OP10. Int. J. Syst. Evol. Microbiol. 61:1442-1447.
-
(2010)
Int. J. Syst. Evol. Microbiol
, vol.61
, pp. 1442-1447
-
-
Tamaki, H.1
Tanaka, Y.2
Matsuzawa, H.3
Muramatsu, M.4
Meng, X.-Y.5
Hanada, S.6
Mori, K.7
Kamagata, Y.8
-
60
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
Tamura, K., J. Dudley, M. Nei, and S. Kumar. 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-1599.
-
(2007)
Mol. Biol. Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
61
-
-
0036205605
-
Microbial diversity of hydrothermal sediments in the Guaymas Basin: Evidence for anaerobic methanotrophic communities
-
Teske, A., K.U. Hinrichs, V. Edgcomb, A. de Vera Gomez, D. Kysela, S.P. Sylva, M.L. Sogin, and H.W. Jannasch. 2002. Microbial diversity of hydrothermal sediments in the Guaymas Basin: evidence for anaerobic methanotrophic communities. Appl. Environ. Microbiol. 68:1994-2007.
-
(2002)
Appl. Environ. Microbiol
, vol.68
, pp. 1994-2007
-
-
Teske, A.1
Hinrichs, K.U.2
Edgcomb, V.3
de Vera Gomez, A.4
Kysela, D.5
Sylva, S.P.6
Sogin, M.L.7
Jannasch, H.W.8
-
62
-
-
0344955534
-
Theoretical basis for reservoir management
-
In J.G. Tundisi, and M. Straškraba (ed.), Backhuys Publishers, Leiden, The Netherlands
-
Tundisi, J.G., T. Matsumura-Tundisi, and O. Rocha. 1999. Theoretical basis for reservoir management, p. 505-528. In J.G. Tundisi, and M. Straškraba (ed.), Theoretical Reservoir Ecology and its Applications. Backhuys Publishers, Leiden, The Netherlands.
-
(1999)
Theoretical Reservoir Ecology and Its Applications
, pp. 505-528
-
-
Tundisi, J.G.1
Matsumura-Tundisi, T.2
Rocha, O.3
-
63
-
-
0035033231
-
Unusual bacterioplankton community structure in ultra-oligotrophic Crater Lake
-
Urbach, E., K.L. Vergin, L. Young, A. Morse, G.L. Larson, and S.J. Giovannoni. 2001. Unusual bacterioplankton community structure in ultra-oligotrophic Crater Lake. Limnol. Oceanogr. Methods 46:557-572.
-
(2001)
Limnol. Oceanogr. Methods
, vol.46
, pp. 557-572
-
-
Urbach, E.1
Vergin, K.L.2
Young, L.3
Morse, A.4
Larson, G.L.5
Giovannoni, S.J.6
-
64
-
-
20444400602
-
Characterization of bacterial communities in four freshwater lakes differing in nutrient load and food web structure
-
Van der Gucht, K., T. Vandekerckhove, N. Vloemans, et al. 2005. Characterization of bacterial communities in four freshwater lakes differing in nutrient load and food web structure. FEMS Microbiol. Ecol. 53:205-220.
-
(2005)
FEMS Microbiol. Ecol
, vol.53
, pp. 205-220
-
-
van der Gucht, K.1
Vandekerckhove, T.2
Vloemans, N.3
-
65
-
-
1342289956
-
Actinobacterial 16S rRNA genes from freshwater habitats cluster in four distinct lineages
-
Warnecke, F., R. Amann, and J. Pernthaler. 2004. Actinobacterial 16S rRNA genes from freshwater habitats cluster in four distinct lineages. Environ. Microbiol. 6:242-253.
-
(2004)
Environ. Microbiol
, vol.6
, pp. 242-253
-
-
Warnecke, F.1
Amann, R.2
Pernthaler, J.3
-
66
-
-
0000752430
-
Similarity indices, sample size and diversity
-
Wolda, H. 1981. Similarity indices, sample size and diversity. Oecologia 50:296-302.
-
(1981)
Oecologia
, vol.50
, pp. 296-302
-
-
Wolda, H.1
-
67
-
-
33746689880
-
High predictability of the seasonal dynamics of a species-like Polynucleobacter population in a freshwater lake
-
Wu, Q.L., and M.W. Hahn. 2006. High predictability of the seasonal dynamics of a species-like Polynucleobacter population in a freshwater lake. Environ. Microbiol. 8:1660-1666.
-
(2006)
Environ. Microbiol
, vol.8
, pp. 1660-1666
-
-
Wu, Q.L.1
Hahn, M.W.2
-
68
-
-
33745050646
-
Differences in structure and dynamics of Polynucleobacter communities in a temperate and a subtropical lake, revealed at three phylogenetic levels
-
Wu, Q.L., and M.W. Hahn. 2006. Differences in structure and dynamics of Polynucleobacter communities in a temperate and a subtropical lake, revealed at three phylogenetic levels. FEMS Microbiol. Ecol. 57:67-79.
-
(2006)
FEMS Microbiol. Ecol
, vol.57
, pp. 67-79
-
-
Wu, Q.L.1
Hahn, M.W.2
-
69
-
-
33747359120
-
Bacterioplankton community composition along a salinity gradient of sixteen high-mountain lakes located on the Tibetan plateau, China
-
Wu, Q.L., G. Zwart, M. Schauer, M.P. Kamst-van Agterveld, and M.W. Hahn. 2006. Bacterioplankton community composition along a salinity gradient of sixteen high-mountain lakes located on the Tibetan plateau, China. Appl. Environ. Microbiol. 72:5478-5485.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 5478-5485
-
-
Wu, Q.L.1
Zwart, G.2
Schauer, M.3
Kamst-van Agterveld, M.P.4
Hahn, M.W.5
-
70
-
-
34250001696
-
Bacterial community composition of a shallow hypertrophic freshwater lake in China, revealed by16S rRNA gene sequences
-
Wu, X., W. Xi, W. Ye, and H. Yang. 2007. Bacterial community composition of a shallow hypertrophic freshwater lake in China, revealed by16S rRNA gene sequences. FEMS Microbiol. Ecol. 61:85-96.
-
(2007)
FEMS Microbiol. Ecol
, vol.61
, pp. 85-96
-
-
Wu, X.1
Xi, W.2
Ye, W.3
Yang, H.4
-
71
-
-
70349852874
-
The vertical distribution of bacterial and archaeal communities in the water and sediment of Lake Taihu
-
Ye, W., X. Liu, S. Lin, J. Tan, J. Pan, D. Li, and H. Yang. 2009. The vertical distribution of bacterial and archaeal communities in the water and sediment of Lake Taihu. FEMS Microbiol. Ecol. 70:263-276.
-
(2009)
FEMS Microbiol. Ecol
, vol.70
, pp. 263-276
-
-
Ye, W.1
Liu, X.2
Lin, S.3
Tan, J.4
Pan, J.5
Li, D.6
Yang, H.7
-
72
-
-
0037178021
-
Typical freshwater bacteria: An analysis of available 16S rRNA gene sequences from plankton of lakes and rivers
-
Zwart, G., B.C. Crump, M. Kamst-van Agterveld, F. Hagen, and S.-K. Han. 2002. Typical freshwater bacteria: an analysis of available 16S rRNA gene sequences from plankton of lakes and rivers. Aquat. Microb. Ecol. 28:141-155.
-
(2002)
Aquat. Microb. Ecol
, vol.28
, pp. 141-155
-
-
Zwart, G.1
Crump, B.C.2
Kamst-van Agterveld, M.3
Hagen, F.4
Han, S.-K.5
-
73
-
-
10744221283
-
Rapid screening for freshwater bacterial groups by using reverse line blot hybridization
-
Zwart, G., E.J. van Hannen, M.P. Kamst-van Agterveld, et al. 2003. Rapid screening for freshwater bacterial groups by using reverse line blot hybridization. Appl. Environ. Microbiol. 69:5875-5883.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 5875-5883
-
-
Zwart, G.1
van Hannen, E.J.2
Kamst-van Agterveld, M.P.3
|