메뉴 건너뛰기




Volumn 69, Issue 9, 2003, Pages 5248-5254

Isolation of strains belonging to the cosmopolitan Polynucleobacter necessarius cluster from freshwater habitats located in three climatic zones

Author keywords

[No Author keywords available]

Indexed keywords

BIODIVERSITY; CLIMATOLOGY; ECOSYSTEMS; RNA;

EID: 0141816854     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.69.9.5248-5254.2003     Document Type: Article
Times cited : (174)

References (33)
  • 2
    • 0000450150 scopus 로고    scopus 로고
    • Bacterial diversity in an arctic lake: A freshwater SAR11 cluster
    • Bahr, M., J. E. Hobbie, and M. L. Sogin. 1996. Bacterial diversity in an arctic lake: a freshwater SAR11 cluster. Aquat. Microb. Ecol. 11:271-277.
    • (1996) Aquat. Microb. Ecol. , vol.11 , pp. 271-277
    • Bahr, M.1    Hobbie, J.E.2    Sogin, M.L.3
  • 3
    • 0242684409 scopus 로고    scopus 로고
    • Effect of signal compounds and incubation conditions on the culturability of freshwater bacterioplankton
    • Bruns, A., U. Nubel, H. Cypionka, and J. Overmann. 2003. Effect of signal compounds and incubation conditions on the culturability of freshwater bacterioplankton. Appl. Environ. Microbiol. 69:1980-1989.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 1980-1989
    • Bruns, A.1    Nubel, U.2    Cypionka, H.3    Overmann, J.4
  • 5
    • 0032976388 scopus 로고    scopus 로고
    • Phylogenetic analysis of particle-attached and free-living bacterial communities in the Columbia River, its estuary, and the adjacent coastal ocean
    • Crump, B. C., E. V. Armbrust, and J. A. Baross. 1999. Phylogenetic analysis of particle-attached and free-living bacterial communities in the Columbia River, its estuary, and the adjacent coastal ocean. Appl. Environ. Microbiol. 65:3192-3204.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 3192-3204
    • Crump, B.C.1    Armbrust, E.V.2    Baross, J.A.3
  • 6
    • 0242668350 scopus 로고    scopus 로고
    • Bacterioplankton community shifts in an arctic lake correlate with seasonal changes in organic matter source
    • Crump, B. C., G. W. Kling, M. Bahr, and J. E. Hobbie, 2003. Bacterioplankton community shifts in an arctic lake correlate with seasonal changes in organic matter source. Appl. Environ. Microbiol. 69:2253-2268.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 2253-2268
    • Crump, B.C.1    Kling, G.W.2    Bahr, M.3    Hobbie, J.E.4
  • 7
    • 0033140063 scopus 로고    scopus 로고
    • Bacterial symbioses. Predation and mutually beneficial associations
    • Esteve, I., and N. Gaju. 1999. Bacterial symbioses. Predation and mutually beneficial associations. Int. Microbiol. 2:81-86.
    • (1999) Int. Microbiol. , vol.2 , pp. 81-86
    • Esteve, I.1    Gaju, N.2
  • 8
    • 0033754255 scopus 로고    scopus 로고
    • Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of Actinobacteria
    • Glöckner, F. O., E. Zaichikov, N. Belkova, L. Denissova, J. Pernthaler, A. Pernthaler, and R. Amann. 2000. Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of Actinobacteria. Appl. Environ. Microbiol. 66:5053-5065.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 5053-5065
    • Glöckner, F.O.1    Zaichikov, E.2    Belkova, N.3    Denissova, L.4    Pernthaler, J.5    Pernthaler, A.6    Amann, R.7
  • 9
    • 0034813331 scopus 로고    scopus 로고
    • Classification of metal-resistant bacteria from industrial biotopes as Ralstonia campinensis sp. nov., Ralstonia metallidurans sp. nov. and Ralstonia basilensis Steinle et al. 1998 emend
    • Goris, J., P. De Vos, T. Coenye, B. Hoste, D. Janssens, H. Brim, L. Diels, M. Mergeay, K. Kersters, and P. Vandamme. 2001. Classification of metal-resistant bacteria from industrial biotopes as Ralstonia campinensis sp. nov., Ralstonia metallidurans sp. nov. and Ralstonia basilensis Steinle et al. 1998 emend. Int. J. Syst. Evol. Microbiol. 51:1773-1782.
    • (2001) Int. J. Syst. Evol. Microbiol. , vol.51 , pp. 1773-1782
    • Goris, J.1    De Vos, P.2    Coenye, T.3    Hoste, B.4    Janssens, D.5    Brim, H.6    Diels, L.7    Mergeay, M.8    Kersters, K.9    Vandamme, P.10
  • 10
    • 0344374434 scopus 로고    scopus 로고
    • Flagellate predation on a bacterial model community: Interplay of size-selective grazing, specific bacterial cell size, and bacterial community composition
    • Hahn, M. W., and M. G. Höfle. 1999. Flagellate predation on a bacterial model community: interplay of size-selective grazing, specific bacterial cell size, and bacterial community composition. Appl. Environ. Microbiol. 65:4863-4872.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 4863-4872
    • Hahn, M.W.1    Höfle, M.G.2
  • 11
    • 0035067696 scopus 로고    scopus 로고
    • Grazing of protozoa and its effect on populations of aquatic bacteria
    • Hahn, M. W., and M. G. Höfle. 2001. Grazing of protozoa and its effect on populations of aquatic bacteria. FEMS Microbiol. Ecol. 35:113-121.
    • (2001) FEMS Microbiol. Ecol. , vol.35 , pp. 113-121
    • Hahn, M.W.1    Höfle, M.G.2
  • 12
    • 0032938597 scopus 로고    scopus 로고
    • Bacterial filament formation, a defense mechanism against flagellate grazing, is growth rate controlled in bacteria of different phyla
    • Hahn, M. W., E. R. B. Moore, and M. G. Höfle. 1999. Bacterial filament formation, a defense mechanism against flagellate grazing, is growth rate controlled in bacteria of different phyla. Appl. Environ. Microbiol. 65:25-35.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 25-35
    • Hahn, M.W.1    Moore, E.R.B.2    Höfle, M.G.3
  • 13
    • 0345269205 scopus 로고    scopus 로고
    • Isolation of novel ultramicrobacteria classified as Actinobacteria from five freshwater habitats in Europe and Asia
    • Hahn, M. W., H. Lünsdorf, Q. L. Wu, M. Schauer, M. G. Höfle, J. Boenigk, and P. Stadler. 2003. Isolation of novel ultramicrobacteria classified as Actinobacteria from five freshwater habitats in Europe and Asia. Appl. Environ. Microbiol. 69:1442-1451.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 1442-1451
    • Hahn, M.W.1    Lünsdorf, H.2    Wu, Q.L.3    Schauer, M.4    Höfle, M.G.5    Boenigk, J.6    Stadler, P.7
  • 14
    • 0000495106 scopus 로고
    • Polynucleobacter necessarius gen. nov., sp. nov., an obligately endosymbiotic bacterium living in the cytoplasm of Euplotes aediculatus
    • Heckmann, K., and H. J. Schmidt. 1987. Polynucleobacter necessarius gen. nov., sp. nov., an obligately endosymbiotic bacterium living in the cytoplasm of Euplotes aediculatus. Int. J. Syst. Bacteriol. 37:456-457.
    • (1987) Int. J. Syst. Bacteriol. , vol.37 , pp. 456-457
    • Heckmann, K.1    Schmidt, H.J.2
  • 15
    • 0030872627 scopus 로고    scopus 로고
    • Bacterial diversity in Adirondack mountain lakes as revealed by 16S rRNA gene sequences
    • Hirons, W. D., E. A. Methé, S. A. Nierzwickibauer, and J. P. Zehr. 1997. Bacterial diversity in Adirondack mountain lakes as revealed by 16S rRNA gene sequences. Appl. Environ. Microbiol. 63:2957-2960.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 2957-2960
    • Hirons, W.D.1    Methé, E.A.2    Nierzwickibauer, S.A.3    Zehr, J.P.4
  • 16
    • 0345104351 scopus 로고    scopus 로고
    • Seasonal dynamics of bacterioplankton community structure in a eutrophic lake as determined by 5S rRNA analysis
    • Höfle, M. G., H. Haas, and K. Dominik. 1999. Seasonal dynamics of bacterioplankton community structure in a eutrophic lake as determined by 5S rRNA analysis. Appl. Environ. Microbiol. 65:3164-3174.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 3164-3174
    • Höfle, M.G.1    Haas, H.2    Dominik, K.3
  • 17
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • H. N. Munro (ed.). Academic Press, New York, N.Y.
    • Jukes, T. H., and C. R. Cantor. 1969. Evolution of protein molecules, p. 21-132. In H. N. Munro (ed.), Mammalian protein metabolism, vol. 3. Academic Press, New York, N.Y.
    • (1969) Mammalian Protein Metabolism , vol.3 , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 18
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular evolutionary genetics analysis software
    • Kumar, S., K. Tamura, I. B. Jakobsen, and M. Nei. 2001. MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17:1244-1245.
    • (2001) Bioinformatics , vol.17 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.B.3    Nei, M.4
  • 19
    • 0031838852 scopus 로고    scopus 로고
    • Contrasts between marine and freshwater bacterial community composition-analyses of communities in Lake George and six other Adirondack lakes
    • Methé, B. A., W. D. Hiorns, and J. P. Zehr. 1998. Contrasts between marine and freshwater bacterial community composition-analyses of communities in Lake George and six other Adirondack lakes. Limnol. Oceanogr. 43:368-374.
    • (1998) Limnol. Oceanogr. , vol.43 , pp. 368-374
    • Methé, B.A.1    Hiorns, W.D.2    Zehr, J.P.3
  • 20
    • 0038542819 scopus 로고    scopus 로고
    • Bacterioplankton community diversity in a maritime antarctic lake, determined by culture-dependent and culture-independent techniques
    • Pearce, D. A., C. J. van der Gast, B. Lawley, and J. C. Ellis-Evans. 2003. Bacterioplankton community diversity in a maritime antarctic lake, determined by culture-dependent and culture-independent techniques. FEMS Microbiol. Ecol. 45:59-70.
    • (2003) FEMS Microbiol. Ecol. , vol.45 , pp. 59-70
    • Pearce, D.A.1    Van der Gast, C.J.2    Lawley, B.3    Ellis-Evans, J.C.4
  • 21
    • 0029973821 scopus 로고    scopus 로고
    • 16S rRNA gene diversity of attached and unattached bacteria in boreholes along the access tunnel to the Aespoe hard rock laboratory
    • Pedersen, K., J. Arlinger, S. Ekendahl., and L. Hallbeck. 1996. 16S rRNA gene diversity of attached and unattached bacteria in boreholes along the access tunnel to the Aespoe hard rock laboratory, Sweden. FEMS Microbiol. Ecol. 19:249-262.
    • (1996) Sweden. FEMS Microbiol. Ecol. , vol.19 , pp. 249-262
    • Pedersen, K.1    Arlinger, J.2    Ekendahl, S.3    Hallbeck, L.4
  • 22
    • 0037043731 scopus 로고    scopus 로고
    • Cultivation of the ubiquitous SAR11 marine bacterioplankton clade
    • Rappé, M. S., S. A. Connon, K. L. Vergin, and S. J. Giovannoni. 2002. Cultivation of the ubiquitous SAR11 marine bacterioplankton clade. Nature 418:630-633.
    • (2002) Nature , vol.418 , pp. 630-633
    • Rappé, M.S.1    Connon, S.A.2    Vergin, K.L.3    Giovannoni, S.J.4
  • 23
    • 0036795083 scopus 로고    scopus 로고
    • Succession of bacterial community structure along the Changjiang River determined by denaturing gradient gel electrophoresis and clone library analysis
    • Sekiguchi, H., M. Watanabe, T. Nakahara, B. Xu, and H. Uchiyama. 2002. Succession of bacterial community structure along the Changjiang River determined by denaturing gradient gel electrophoresis and clone library analysis. Appl. Environ. Microbiol. 68:5142-5150.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 5142-5150
    • Sekiguchi, H.1    Watanabe, M.2    Nakahara, T.3    Xu, B.4    Uchiyama, H.5
  • 24
    • 0037461960 scopus 로고    scopus 로고
    • Composition and dynamics of particle-associated and free-living bacterial communities in the Weser estuary
    • Selje, N., and M. Simon. 2003. Composition and dynamics of particle-associated and free-living bacterial communities in the Weser estuary, Germany. Aquat. Microb. Ecol. 30:221-237.
    • (2003) Germany. Aquat. Microb. Ecol. , vol.30 , pp. 221-237
    • Selje, N.1    Simon, M.2
  • 25
    • 0032398752 scopus 로고    scopus 로고
    • A study of the biodiversity of Baikal picoplankton by comparative analysis of 16S rRNA gene 5′-terminal regions
    • Semenova, E. A., and K. D. Kuznedelov. 1998. A study of the biodiversity of Baikal picoplankton by comparative analysis of 16S rRNA gene 5′-terminal regions. Mol. Biol. 32:754-760.
    • (1998) Mol. Biol. , vol.32 , pp. 754-760
    • Semenova, E.A.1    Kuznedelov, K.D.2
  • 26
    • 0035374573 scopus 로고    scopus 로고
    • Changes in bacterial community composition and dynamics and viral mortality rates associated with enhanced flagellate grazing in a mesoeutrophic reservoir
    • Simek, K., J. Pernthaler, M. G. Weinbauer, K. Hornak, J. R. Dolan, J. Nedoma, M. Masin, and R. Amann. 2001. Changes in bacterial community composition and dynamics and viral mortality rates associated with enhanced flagellate grazing in a mesoeutrophic reservoir. Appl. Environ. Microbiol. 67:2723-2733.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 2723-2733
    • Simek, K.1    Pernthaler, J.2    Weinbauer, M.G.3    Hornak, K.4    Dolan, J.R.5    Nedoma, J.6    Masin, M.7    Amann, R.8
  • 27
    • 0030613092 scopus 로고    scopus 로고
    • Morphological and compositional shifts in an experimental bacterial community influenced by protists with contrasting feeding modes
    • Simek, K., J. Vrba, J. Pernthaler, T. Posch, P. Hartman, J. Nedoma, and R. Psenner. 1997. Morphological and compositional shifts in an experimental bacterial community influenced by protists with contrasting feeding modes. Appl. Environ. Microbiol. 63:587-595.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 587-595
    • Simek, K.1    Vrba, J.2    Pernthaler, J.3    Posch, T.4    Hartman, P.5    Nedoma, J.6    Psenner, R.7
  • 28
    • 0026615105 scopus 로고
    • Direct and indirect evidence of size-selective grazing on pelagic bacteria by freshwater nanoflagellates
    • Simek, K., and T. H. Chrzanowski. 1992. Direct and indirect evidence of size-selective grazing on pelagic bacteria by freshwater nanoflagellates. Appl. Environ. Microbiol. 58:3715-3720.
    • (1992) Appl. Environ. Microbiol. , vol.58 , pp. 3715-3720
    • Simek, K.1    Chrzanowski, T.H.2
  • 29
    • 0030061074 scopus 로고    scopus 로고
    • Polynucleobacter necessarius, an obligate bacterial endosymbiont of the hypotrichous ciliate Euplotes aediculatus, is a member of the beta-subclass of Proteobacteria
    • Springer, N., R. Amann, W. Ludwig, K. H. Schleifer, and H. Schmidt. 1996. Polynucleobacter necessarius, an obligate bacterial endosymbiont of the hypotrichous ciliate Euplotes aediculatus, is a member of the beta-subclass of Proteobacteria. FEMS Microbiol. Lett. 135:333-336.
    • (1996) FEMS Microbiol. Lett. , vol.135 , pp. 333-336
    • Springer, N.1    Amann, R.2    Ludwig, W.3    Schleifer, K.H.4    Schmidt, H.5
  • 30
    • 0031867545 scopus 로고    scopus 로고
    • Aerobic mineralization of 2,6-dichlorophenol by Ralstonia sp. strain RK1
    • Steinle, P., G. Stucki, R. Stettler, and K. W. Hanselmann. 1998. Aerobic mineralization of 2,6-dichlorophenol by Ralstonia sp. strain RK1. Appl. Environ. Microbiol. 64:2566-2571.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 2566-2571
    • Steinle, P.1    Stucki, G.2    Stettler, R.3    Hanselmann, K.W.4
  • 33
    • 0037178021 scopus 로고    scopus 로고
    • Typical freshwater bacteria: An analysis of available 16S rRNA gene sequences from plankton of lakes and rivers
    • Zwart, G., B. C. Crump, M. P. Kamst-van Agterveld, F. Hagen, and S. K. Han. 2002. Typical freshwater bacteria: an analysis of available 16S rRNA gene sequences from plankton of lakes and rivers. Aquat. Microb. Ecol. 28:141-155.
    • (2002) Aquat. Microb. Ecol. , vol.28 , pp. 141-155
    • Zwart, G.1    Crump, B.C.2    Kamst-van Agterveld, M.P.3    Hagen, F.4    Han, S.K.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.