Do bottlenecks increase additive genetic variance?

Conservation Genetics

Volumn 13, Issue 2, 2012, Pages 333-342

  Taft, Heather R ^a   Roff, Derek A ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Additive genetic variance; Bottlenecks; Inbreeding; Quantitative genetics

Indexed keywords

ANTHROPOGENIC EFFECT; EXPERIMENTAL STUDY; EXTINCTION; FITNESS; FUNCTIONAL MORPHOLOGY; GENETIC MARKER; GENETIC VARIATION; META-ANALYSIS; MOLECULAR ANALYSIS; NUMERICAL MODEL; POPULATION BOTTLENECK; POPULATION SIZE; QUANTITATIVE ANALYSIS;

EID: 84858008860     PISSN: 15660621     EISSN: 15729737     Source Type: Journal    
DOI: 10.1007/s10592-011-0285-y     Document Type: Article

References (89)

1. Alves DA, Imperatriz-Fonseca VL, Francoy TM, Santos-Filho PS, Billen J, Wenseleers T (2011) Successful maintenance of a stingless bee population despite a severe genetic bottleneck. Conserv Genet 12: 647-658.
2. Andersson S, Ellmer M, Jorgensen TH, Palme A (2010) Quantitative genetic effects of bottlenecks: experimental evidence from a wild plant species, Nigella degenii. J Hered 101: 298-307.
3. Armbruster P, Reed DH (2005) Inbreeding depression in benign and stressful environments. Heredity 95: 235-242.
4. Barton NH, Turelli M (2004) Effects of genetic drift on variance components under a general model of epistasis. Evolution 58: 2111-2132.
5. Bellinger MR, Johnson JA, Toepfer J, Dunn P (2003) Loss of genetic variation in Greater Prairie Chickens following a population bottleneck in Wisconsin, USA. Conserv Biol 17: 717-724.
6. Bonnell ML, Selander RK (1974) Elephant seals: genetic variation and near extinction. Science 184: 908-909.
7. Briggs WH, Goldman IL (2006) Genetic variation and selection response in model breeding populations of Brassica rapa following a diversity bottleneck. Genetics 172: 457-465.
8. Bryant EH, Meffert LM (1993) The effect of serial founder-flush cycles on quantitative genetic-variation in the housefly. Heredity 70: 122-129.
9. Bryant EH, Meffert LM (1995) An analysis of selectional response in relation to a population bottleneck. Evolution 49: 626-634.
10. Bryant EH, Meffert LM (1996) Nonadditive genetic structuring of morphometric variation in relation to a population bottleneck. Heredity 77: 168-176.
11. Bryant EH, McCommas SA, Combs LM (1986) The effect of an experimental bottleneck upon quantitative genetic-variation in the housefly. Genetics 114: 1191-1211.
12. Cardoso MJ, Eldridge MDB, Oakwood M, Rankmore B, Sherwin WB, Firestone KB (2009) Effects of founder events on the genetic variation of translocated island populations: implications for conservation management of the northern quoll. Conserv Genet 10: 1719-1733.
13. Chan C-H, Robertson HA, Saul EK, Nia LV, Vy Phuong L, Kong X, Zhao Y, Chambers GK (2011) Genetic variation in the kakerori (Pomarea dimidiata), an endangered endemic bird successfully recovering in the Cook Islands. Conserv Genet 12: 441-447.
14. Cheverud JM, Routman EJ (1996) Epistasis as a source of increased additive genetic variance at population bottlenecks. Evolution 50: 1042-1051.
15. Cheverud JM, Vaughn TT, Pletscher LS, King-Ellison K, Bailiff J, Adams E, Erickson C, Bonislawski A (1999) Epistasis and the evolution of additive genetic variance in populations that pass through a bottleneck. Evolution 53: 1009-1018.
16. Cockerham CC, Tachida H (1988) Permanency of response to selection for quantitative characters in finite populations. Proc Natl Acad Sci USA 85: 1563-1565.
17. Consuegra S, Verspoor E, Knox D, de Leaniz CG (2005) Asymmetric gene flow and the evolutionary maintenance of genetic diversity in small, peripheral Atlantic salmon populations. Conserv Genet 6: 823-842.
18. Corti P, Shafer ABA, Coltman DW, Festa-Bianchet M (2011) Past bottlenecks and current population fragmentation of endangered huemul deer (Hippocamelus bisulcus): implications for preservation of genetic diversity. Conserv Genet 12: 119-128.
19. Crnokrak P, Roff DA (1995) Dominance variance-associations with selection and fitness. Heredity 75: 530-540.
20. Crow JF, Kimura M (1970) Introduction to theoretical population genetics. Harper and Row, New York.
21. Culver M, Hedrick PW, Murphy K, O'Brien S, Hornocker MG (2008) Estimation of the bottleneck size in Florida panthers. Anim Conserv 11: 104-110.
22. DeRose MA, Roff DA (1999) A comparison of inbreeding depression in life-history and morphological traits in animals. Evolution 53: 1288-1292.
23. Dlugosch KM, Parker IM (2008) Founding events in species invasions: genetic variation, adaptive evolution, and the role of multiple introductions. Mol Ecol 17: 431-449.
24. Dobson AJ (1983) An Introduction to statistical modelling. Chapman and Hall, London.
25. Durrant CJ, Beebee TJC, Greenaway F, Hill DA (2009) Evidence of recent population bottlenecks and inbreeding in British populations of Bechstein's bat, Myotis bechsteinii. Conserv Genet 10: 489-496.
26. Earl DA, Louie KD, Bardeleben C, Swift CC, Jacobs DK (2010) Range wide microsatellite phylogeography of the endangered tidewater goby, Eucyclogobius newberryi (Teleostei: Gobiidae), a genetically subdivided coastal fish with limited marine dispersal. Conserv Genet 11: 103-114.
27. Fenderson LE, Kovach AI, Litvaitis JA, Litvaitis MK (2011) Population genetic structure and history of fragmented remnant populations of the New England cottontail (Sylvilagus transitionalis). Conserv Genet 12: 943-958.
28. Fernandez A, Toro MA, Lopez-Fanjul C (1995) The effect of inbreeding on the redistribution of genetic variance of fecundity and viability in Tribolium castaneum. Heredity 75: 376-381.
29. Fernandez J, Rodriguez-Ramilo ST, Perez-Figueroa A, Lopez-Fanjul C, Caballero A (2003) Lack of nonadditive genetic effects on early fecundity in Drosophila melanogaster. Evolution 57: 558-565.
30. Fox CW, Reed DH (2011) Inbreeding depression increases with environmental stress: an experimental study and meta-analysis. Evolution 65: 246-258.
31. Frankham R (1998) Inbreeding and extinction: island populations. Conserv Biol 12: 665-675.
32. Frankham R, Lees K, Montgomery ME, England PR, Lowe EH, Briscoe DA (1999) Do population size bottlenecks reduce evolutionary potential? Anim Conserv 2: 255-260.
33. Funk WC, Forsman ED, Johnson M, Mullins TD, Haig SM (2010) Evidence for recent population bottlenecks in northern spotted owls (Strix occidentalis caurina). Conserv Genet 11: 1013-1021.
34. Garcia N, Lopez-Fanjul C, Garcia-Dorado A (1994) The genetics of viability in Drosophila melanogaster-effects of inbreeding and artificial selection. Evolution 48: 1277-1285.
35. Goodnight CJ (1987) On the effect of founder events on epistatic genetic variance. Evolution 41: 80-91.
36. Goodnight CJ (1988) Epistasis and the effect of founder events on the additive genetic variance. Evolution 42: 441-454.
37. Griffen BD, Drake JM (2008) A review of extinction in experimental populations. J Anim Ecol 77: 1274-1287.
38. Groombridge JJ, Dawson DA, Burke T, Prys-Jones R, MdL Brooke, Shah N (2009) Evaluating the demographic history of the Seychelles kestrel (Falco araea): genetic evidence for recovery from a population bottleneck following minimal conservation management. Biol Conserv 142: 2250-2257.
39. Haanes H, Roed KH, Flagstad O, Rosef O (2010) Genetic structure in an expanding cervid population after population reduction. Conserv Genet 11: 11-20.
40. Habel JC, Zachos FE, Finger A, Meyer M, Louy D, Assmann T, Schmitt T (2009) Unprecedented long-term genetic monomorphism in an endangered relict butterfly species. Conserv Genet 10: 1659-1665.
41. Hawley DM, Briggs J, Dhondt AA, Lovette IJ (2008) Reconciling molecular signatures across markers: mitochondrial DNA confirms founder effect in invasive North American house finches (Carpodacus mexicanus). Conserv Genet 9: 637-643.
42. Heber S, Briskie JV (2010) Population bottlenecks and increased hatching failure in endangered birds. Conserv Biol 24: 1674-1678.
43. Hoelzel AR (1999) Impact of population bottlenecks on genetic variation and the importance of life-history; a case study of the northern elephant seal. Biol J Linn Soc 68: 23-39.
44. Hoelzel AR, Fleischer RC, Campagna C, Le Boeuf BJ, Alvord G (2002) Impact of a population bottleneck on symmetry and genetic diversity in the northern elephant seal. J Evol Biol 15: 567-575.
45. Jacquemyn H, Roldan-Ruiz I, Honnay O (2010) Evidence for demographic bottlenecks and limited gene flow leading to low genetic diversity in a rare thistle. Conserv Genet 11: 1979-1987.
46. Kalinowski ST, Muhlfeld CC, Guy CS, Cox B (2010) Founding population size of an aquatic invasive species. Conserv Genet 11: 2049-2053.
47. Keller LF, Waller DM (2002) Inbreeding effects in wild populations. Trends Ecol Evol 17: 230-241.
48. Kristensen TN, Sorensen AC, Sorensen D, Pedersen KS, Sorensen JG, Loeschcke V (2005) A test of quantitative genetic theory using Drosophila-effects of inbreeding and rate of inbreeding on heritabilities and variance components. J Evol Biol 18: 763-770.
49. Kruuk LEB (2004) Estimating genetic parameters in natural populations using the 'animal model'. Philos Trans R Soc B 359: 873-890.
50. Kuro-o M, Yonekawa H, Saito S, Eda M, Higuchi H, Koike H, Hasegawa H (2010) Unexpectedly high genetic diversity of mtDNA control region through severe bottleneck in vulnerable albatross Phoebastria albatrus. Conserv Genet 11: 127-137.
51. Lande R (1980) Genetic variation and phenotypic evolution during allopatric speciation. Am Nat 116: 463-479.
52. Lande R, Engen S, Saether B (2003) Stochastic population dynamics in ecology and conservation. Oxford University Press, New York.
53. Leinonen T, O'Hara RB, Cano JM, Merila J (2008) Comparative studies of quantitative trait and neutral marker divergence: a meta-analysis. J Evol Biol 21: 1-17.
54. Lints FA, Bourgois M (1984) Population crash, population flush and genetic-variability in cage populations of Drosophila melanogaster. Genet Sel Evol 16: 45-55.
55. Lopez-Fanjul C, Villaverde A (1989) Inbreeding increases genetic variance for viability in Drosophila melanogaster. Evolution 43: 1800-1804.
56. Lopez-Fanjul C, Guerra J, Garcia A (1989) Changes in the distribution of the genetic variance of a quantitative trait in small populations of Drosophila melanogaster. Genet Sel Evol 21: 159-168.
57. Meffert LM (1995) Bottleneck effects on genetic variance for courtship repertoire. Genetics 139: 365-374.
58. Meimberg H, Hammond JI, Jorgensen CM, Park TW, Gerlach JD, Rice KJ, McKay JK (2006) Molecular evidence for an extreme genetic bottleneck during introduction of an invading grass to California. Biol Invasions 8: 1355-1366.
59. Merila J, Crnokrak P (2001) Comparison of genetic differentiation at marker loci and quantitative traits. J Evol Biol 14: 892-903.
60. Miller KA, Towns DR, Allendorf FW, Ritchie PA, Nelson NJ (2011) Genetic structure and individual performance following a recent founding event in a small lizard. Conserv Genet 12: 461-473.
61. Moritz RFA, Haddad N, Bataieneh A, Shalmon B, Hefetz A (2010) Invasion of the dwarf honeybee Apis florea into the near East. Biol Invasions 12: 1093-1099.
62. Munoz-Fuentes V, Green AJ, Negro JJ, Sorenson MD (2005) Population structure and loss of genetic diversity in the endangered white-headed duck, Oxyura leucocephala. Conserv Genet 6: 999-1015.
63. Neumann K, Jansman H, Kayser A, Maak S, Gattermann R (2004) Multiple bottlenecks in threatened western European populations of the common hamster Cricetus cricetus (L.). Conserv Genet 5: 181-193.
64. Palo JU, O'Hara RB, Laugen AT, Laurila A, Primmer CR, Merila J (2003) Latitudinal divergence of common frog (Rana temporaria) life history traits by natural selection: evidence from a comparison of molecular and quantitative genetic data. Mol Ecol 12: 1963-1978.
65. Puillandre N, Dupas S, Dangles O, Zeddam JL, Capdevielle-Dulac C, Barbin K, Torres-Leguizamon M, Silvain JF (2008) Genetic bottleneck in invasive species: the potato tuber moth adds to the list. Biol Invasions 10: 319-333.
66. Reed DH (2010) Albatrosses, eagles and newts, Oh My!: exceptions to the prevailing paradigm concerning genetic diversity and population viability? Anim Conserv 13: 448-457.
67. Ricanova S, Bryja J, Cosson J-F, Csongor G, Choleva L, Ambros M, Sedlacek F (2011) Depleted genetic variation of the European ground squirrel in Central Europe in both microsatellites and the major histocompatibility complex gene: implications for conservation. Conserv Genet 12: 1115-1129.
68. Robertson A (1952) The effect of inbreeding on the variation due to recessive genes. Genetics 37: 188-207.
69. Roff DA (1997) Evolutionary quantitative genetics. Chapman Hall, New York.
70. Roff DA (1998) Effects of inbreeding on morphological and life history traits of the sand cricket, Gryllus firmus. Heredity 81: 28-37.
71. Roff DA (2006) Introduction to computer-intensive methods of data analysis in biology. Cambridge University Press, New York.
72. Roff DA, Emerson K (2006) Epistasis and dominance: evidence for differential effects in life-history versus morphological traits. Evolution 60: 1981-1990.
73. Russell JC, Abdelkrim J, Fewster RM (2009) Early colonisation population structure of a Norway rat island invasion. Biol Invasions 11: 1557-1567.
74. Saccheri IJ, Nichols RA, Brakefield PM (2001) Effects of bottlenecks on quantitative genetic variation in the butterfly Bicyclus anynana. Genet Res 77: 167-181.
75. Sastre N, Vila C, Salinas M, Bologov VV, Urios V, Sanchez A, Francino O, Ramirez O (2011) Signatures of demographic bottlenecks in European wolf populations. Conserv Genet 12: 701-712.
76. Schoville SD, Tustall TS, Vredenburg VT, Backlin AR, Gallegos E, Wood DA, Fisher RN (2011) Conservation genetics of evolutionary lineages of the endangered mountain yellow-legged frog, Rana muscosa (Amphibia: Ranidae), in southern California. Biol Conserv 144: 2031-2040.
77. Sinclair EA, Costello B, Courtenay JM, Crandall KA (2002) Detecting a genetic bottleneck in Gilbert's Potoroo (Potorous gilbertii) (Marsupialia: Potoroidae), inferred from microsatellite and mitochondrial DNA sequence data. Conserv Genet 3: 191-196.
78. Swatdipong A, Primmer CR, Vasemagi A (2010) Historical and recent genetic bottlenecks in European grayling, Thymallus thymallus. Conserv Genet 11: 279-292.
79. Tachida H, Cockerham CC (1989a) A building block model for quantitative genetics. Genetics 121: 839-844.
80. Tachida H, Cockerham CC (1989b) Effects of identity disequilibrium and linkage on quantitative variation in finite populations. Genet Res 53: 63-70.
81. Turelli M, Barton NH (2006) Will population bottlenecks and multilocus epistasis increase additive genetic variance? Evolution 60: 1763-1776.
82. van Buskirk J, Willi Y (2006) The change in quantitative genetic variation with inbreeding. Evolution 60: 2428-2434.
83. van Heerwaarden B, Willi Y, Kristensen TN, Hoffmann AA (2008) Population bottlenecks increase additive genetic variance but do not break a selection limit in rain forest Drosophila. Genetics 179: 2135-2146.
84. Weber D, Stewart BS, Garza JC, Lehman N (2000) An empirical genetic assessment of the severity of the northern elephant seal population bottleneck. Curr Biol 10: 1287-1290.
85. Whitlock MC, Fowler K (1999) The changes in genetic and environmental variance with inbreeding in Drosophila melanogaster. Genetics 152: 345-353.
86. Willi Y, van Buskirk J, Hoffmann AA (2006) Limits to the adaptive potential of small populations. Annu Rev Ecol Evol Syst 37: 433-458.
87. Willis JH, Orr HA (1993) Increased heritable variation following population bottlenecks-the role of dominance. Evolution 47: 949-957.
88. Wright S (1951) The genetical structure of populations. Ann Eugen 15: 323-354.
89. Wright LI, Tregenza T, Hosken DJ (2008) Inbreeding, inbreeding depression and extinction. Conserv Genet 9: 833-843.