-
1
-
-
65349091104
-
Multilocus heterozygosity and inbreeding in the Siberian jay
-
Alho JS, Lillandt B-G, Jaari S, Merilä J (2009) Multilocus heterozygosity and inbreeding in the Siberian jay. Conserv Genet 10: 605-609.
-
(2009)
Conserv Genet
, vol.10
, pp. 605-609
-
-
Alho, J.S.1
Lillandt, B.-G.2
Jaari, S.3
Merilä, J.4
-
2
-
-
33846005112
-
Automated binning of microsatellite alleles: problems and solutions
-
Amos W, Hoffman JI, Frodsham A, Zhang L, Best S, Hill AVS (2007) Automated binning of microsatellite alleles: problems and solutions. Mol Ecol Notes 7: 10-14.
-
(2007)
Mol Ecol Notes
, vol.7
, pp. 10-14
-
-
Amos, W.1
Hoffman, J.I.2
Frodsham, A.3
Zhang, L.4
Best, S.5
Hill, A.V.S.6
-
3
-
-
4644243715
-
Does heterozygosity estimate inbreeding in real populations?
-
Balloux F, Amos W, Coulson T (2004) Does heterozygosity estimate inbreeding in real populations? Mol Ecol 13: 3021-3031.
-
(2004)
Mol Ecol
, vol.13
, pp. 3021-3031
-
-
Balloux, F.1
Amos, W.2
Coulson, T.3
-
4
-
-
0001103190
-
Niche dimensions of New England cottontails in relation to habitat patch size
-
Barbour MS, Litvaitis JA (1993) Niche dimensions of New England cottontails in relation to habitat patch size. Oecologia 95: 321-327.
-
(1993)
Oecologia
, vol.95
, pp. 321-327
-
-
Barbour, M.S.1
Litvaitis, J.A.2
-
5
-
-
0034370950
-
On the adaptive control of the false discovery rate in multiple testing with independent statistics
-
Benjamini Y, Hochberg Y (2000) On the adaptive control of the false discovery rate in multiple testing with independent statistics. J Educ Behav Stat 25: 60-83.
-
(2000)
J Educ Behav Stat
, vol.25
, pp. 60-83
-
-
Benjamini, Y.1
Hochberg, Y.2
-
6
-
-
33846528664
-
Genetic analysis reveals population structure and recent migration within the highly fragmented range of the Cross River gorilla (Gorilla gorilla diehli)
-
Bergl RA, Vigilant LA (2007) Genetic analysis reveals population structure and recent migration within the highly fragmented range of the Cross River gorilla (Gorilla gorilla diehli). Mol Ecol 16: 501-516.
-
(2007)
Mol Ecol
, vol.16
, pp. 501-516
-
-
Bergl, R.A.1
Vigilant, L.A.2
-
7
-
-
0034024908
-
Does inbreeding affect the extinction risk of small populations?: predictions from Drosophila
-
Bijlsma R, Bundgaard J, Boerema AC (2000) Does inbreeding affect the extinction risk of small populations?: predictions from Drosophila. J Evol Biol 13: 502-514.
-
(2000)
J Evol Biol
, vol.13
, pp. 502-514
-
-
Bijlsma, R.1
Bundgaard, J.2
Boerema, A.C.3
-
8
-
-
54249153312
-
Effects of microsatellite null alleles on assignment testing
-
Carlsson J (2008) Effects of microsatellite null alleles on assignment testing. J Hered 99: 616-623.
-
(2008)
J Hered
, vol.99
, pp. 616-623
-
-
Carlsson, J.1
-
9
-
-
27644469115
-
Construction of a cytogenetically anchored microsatellite map in rabbit
-
Chantry-Darmon C, Urien C, Hayes H, Bertaud M, Chadi-Taourit S, Chardon P, Vaiman D, Rogel-Gaillard C (2005) Construction of a cytogenetically anchored microsatellite map in rabbit. Mamm Genome 16: 442-459.
-
(2005)
Mamm Genome
, vol.16
, pp. 442-459
-
-
Chantry-Darmon, C.1
Urien, C.2
Hayes, H.3
Bertaud, M.4
Chadi-Taourit, S.5
Chardon, P.6
Vaiman, D.7
Rogel-Gaillard, C.8
-
10
-
-
0001446546
-
Systematics and biogeography of the New England cottontail, Sylvilagus transitionalis (Bangs, 1895), with the description of a new species from the Appalachian Mountains
-
Chapman JA, Cramer KL, Dippenaar NJ, Robinson TJ (1992) Systematics and biogeography of the New England cottontail, Sylvilagus transitionalis (Bangs, 1895), with the description of a new species from the Appalachian Mountains. Proc Biol Soc Wash 105: 841-866.
-
(1992)
Proc Biol Soc Wash
, vol.105
, pp. 841-866
-
-
Chapman, J.A.1
Cramer, K.L.2
Dippenaar, N.J.3
Robinson, T.J.4
-
11
-
-
33847668722
-
Microsatellite null alleles and estimation of population differentiation
-
Chapuis M-P, Estoup A (2007) Microsatellite null alleles and estimation of population differentiation. Mol Biol Evol 24: 621-631.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 621-631
-
-
Chapuis, M.-P.1
Estoup, A.2
-
12
-
-
34547883224
-
Bayesian clustering algorithms ascertaining spatial population structure: a new computer program and a comparison study
-
Chen C, Durand E, Forbes F, François O (2007) Bayesian clustering algorithms ascertaining spatial population structure: a new computer program and a comparison study. Mol Ecol Notes 7: 747-756.
-
(2007)
Mol Ecol Notes
, vol.7
, pp. 747-756
-
-
Chen, C.1
Durand, E.2
Forbes, F.3
François, O.4
-
13
-
-
58149085923
-
Simultaneous estimation of null alleles and inbreeding coefficients
-
Chybicki IJ, Burczyk J (2009) Simultaneous estimation of null alleles and inbreeding coefficients. J Hered 100: 106-113.
-
(2009)
J Hered
, vol.100
, pp. 106-113
-
-
Chybicki, I.J.1
Burczyk, J.2
-
14
-
-
0033367760
-
Genetic structure and gene flow among Komodo dragon populations inferred by microsatellite loci analysis
-
Ciofi C, Bruford MW (1999) Genetic structure and gene flow among Komodo dragon populations inferred by microsatellite loci analysis. Mol Ecol 8: S17-S30.
-
(1999)
Mol Ecol
, vol.8
, pp. 17-30
-
-
Ciofi, C.1
Bruford, M.W.2
-
15
-
-
0037974275
-
Microsatellite measures of inbreeding: a meta-analysis
-
Coltman DW, Slate J (2003) Microsatellite measures of inbreeding: a meta-analysis. Evolution 57: 971-983.
-
(2003)
Evolution
, vol.57
, pp. 971-983
-
-
Coltman, D.W.1
Slate, J.2
-
16
-
-
0030478757
-
Description and power analysis of two tests for inferring recent population bottlenecks from allele frequency data
-
Cornuet JM, Luikart G (1996) Description and power analysis of two tests for inferring recent population bottlenecks from allele frequency data. Genetics 144: 2001-2014.
-
(1996)
Genetics
, vol.144
, pp. 2001-2014
-
-
Cornuet, J.M.1
Luikart, G.2
-
18
-
-
67349262391
-
Habitat fragmentation reduces genetic diversity and connectivity among toad populations in the Brazilian Atlantic Coastal Forest
-
Dixo M, Metzger JP, Morgante JS, Zamudio KR (2009) Habitat fragmentation reduces genetic diversity and connectivity among toad populations in the Brazilian Atlantic Coastal Forest. Biol Conserv 142: 1560-1569.
-
(2009)
Biol Conserv
, vol.142
, pp. 1560-1569
-
-
Dixo, M.1
Metzger, J.P.2
Morgante, J.S.3
Zamudio, K.R.4
-
20
-
-
79960608138
-
The New England cottontail, Sylvilagus transitionalis: an annotated bibliography
-
(Available by request from corresponding author)
-
Eabry S (1983) The New England cottontail, Sylvilagus transitionalis: an annotated bibliography. Unpublished report, 50 pp (Available by request from corresponding author).
-
(1983)
Unpublished report
, pp. 50
-
-
Eabry, S.1
-
21
-
-
33846467257
-
Between a rock and a hard place: evaluating the relative risks of inbreeding and outbreeding for conservation and management
-
Edmands S (2007) Between a rock and a hard place: evaluating the relative risks of inbreeding and outbreeding for conservation and management. Mol Ecol 16: 463-475.
-
(2007)
Mol Ecol
, vol.16
, pp. 463-475
-
-
Edmands, S.1
-
22
-
-
65949084466
-
Natal dispersal by the pygmy rabbit (Brachylagus idahoensis)
-
Estes-Zumpf WA, Rachlow JL (2009) Natal dispersal by the pygmy rabbit (Brachylagus idahoensis). J Mammal 90: 363-372.
-
(2009)
J Mammal
, vol.90
, pp. 363-372
-
-
Estes-Zumpf, W.A.1
Rachlow, J.L.2
-
23
-
-
21244479740
-
Detecting the number of clusters of individuals using the software structure: a simulation study
-
Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software structure: a simulation study. Mol Ecol 14: 2611-2620.
-
(2005)
Mol Ecol
, vol.14
, pp. 2611-2620
-
-
Evanno, G.1
Regnaut, S.2
Goudet, J.3
-
24
-
-
0842322908
-
Effects of habitat fragmentation on biodiversity
-
Fahrig L (2003) Effects of habitat fragmentation on biodiversity. Annu Rev Ecol Syst 34: 487-515.
-
(2003)
Annu Rev Ecol Syst
, vol.34
, pp. 487-515
-
-
Fahrig, L.1
-
25
-
-
34447120219
-
Inference of population structure using multilocus genotype data: dominant markers and null alleles
-
Falush D, Stephens M, Pritchard JK (2007) Inference of population structure using multilocus genotype data: dominant markers and null alleles. Mol Ecol Notes 7: 574-578.
-
(2007)
Mol Ecol Notes
, vol.7
, pp. 574-578
-
-
Falush, D.1
Stephens, M.2
Pritchard, J.K.3
-
26
-
-
79960602269
-
Landscape genetics of the New England cottontail: effects of habitat fragmentation on population genetic structure and dispersal
-
M. S. thesis University of New Hampshire, Durham, NH
-
Fenderson LE (2010) Landscape genetics of the New England cottontail: effects of habitat fragmentation on population genetic structure and dispersal. M. S. thesis, University of New Hampshire, Durham, NH.
-
(2010)
-
-
Fenderson, L.E.1
-
29
-
-
0003085678
-
Evolutionary change in small populations
-
M. E. Soulé and B. A. Wilcox (Eds.), Sunderland: Sinauer Associates
-
Franklin I (1980) Evolutionary change in small populations. In: Soulé ME, Wilcox BA (eds) Conservation biology: an evolutionary-ecological perspective. Sinauer Associates, Sunderland, pp 135-149.
-
(1980)
Conservation Biology: An Evolutionary-Ecological Perspective
, pp. 135-149
-
-
Franklin, I.1
-
30
-
-
0002281255
-
How large must populations be to retain evolutionary potential?
-
Franklin IR, Frankham R (1998) How large must populations be to retain evolutionary potential? Anim Conserv 1: 69-70.
-
(1998)
Anim Conserv
, vol.1
, pp. 69-70
-
-
Franklin, I.R.1
Frankham, R.2
-
31
-
-
0035076168
-
Detection of reduction in population size using data from microsatellite loci
-
Garza JC, Williamson EG (2001) Detection of reduction in population size using data from microsatellite loci. Mol Ecol 10: 305-318.
-
(2001)
Mol Ecol
, vol.10
, pp. 305-318
-
-
Garza, J.C.1
Williamson, E.G.2
-
32
-
-
33646889771
-
A 7-bp insertion in the 3′ untranslated region suggests the duplication and concerted evolution of the rabbit SRY gene
-
Geraldes A, Ferrand N (2006) A 7-bp insertion in the 3′ untranslated region suggests the duplication and concerted evolution of the rabbit SRY gene. Genet Sel Evol 38: 313-320.
-
(2006)
Genet Sel Evol
, vol.38
, pp. 313-320
-
-
Geraldes, A.1
Ferrand, N.2
-
33
-
-
0000228310
-
Natal dispersal of snowshoe hares during a cyclic population increase
-
Gillis EA, Krebs CJ (1999) Natal dispersal of snowshoe hares during a cyclic population increase. J Mammal 80: 933-939.
-
(1999)
J Mammal
, vol.80
, pp. 933-939
-
-
Gillis, E.A.1
Krebs, C.J.2
-
35
-
-
16244390549
-
Increased infectious disease susceptibility resulting from outbreeding depression
-
Goldberg TL, Grant EC, Inendino KR, Kassler TW, Claussen JE, Philipp DP (2005) Increased infectious disease susceptibility resulting from outbreeding depression. Conserv Biol 19: 455-462.
-
(2005)
Conserv Biol
, vol.19
, pp. 455-462
-
-
Goldberg, T.L.1
Grant, E.C.2
Inendino, K.R.3
Kassler, T.W.4
Claussen, J.E.5
Philipp, D.P.6
-
36
-
-
61649095015
-
Isolation by distance among California sea lion populations in Mexico: redefining management stocks
-
González-Suárez M, Flatz R, Aurioles-Gamboa D, Hedrick PW, Gerber LR (2009) Isolation by distance among California sea lion populations in Mexico: redefining management stocks. Mol Ecol 18: 1088-1099.
-
(2009)
Mol Ecol
, vol.18
, pp. 1088-1099
-
-
González-Suárez, M.1
Flatz, R.2
Aurioles-Gamboa, D.3
Hedrick, P.W.4
Gerber, L.R.5
-
37
-
-
85007320774
-
FSTAT (Version 1.2): a computer program to calculate F-statistics
-
Goudet J (1995) FSTAT (Version 1. 2): a computer program to calculate F-statistics. J Hered 86: 485-486.
-
(1995)
J Hered
, vol.86
, pp. 485-486
-
-
Goudet, J.1
-
39
-
-
51649100477
-
Isolated remnant or recent introduction? Estimating the provenance of Yellingbo Leadbeater's possums by genetic analysis and bottleneck simulation
-
Hansen BD, Taylor AC (2008) Isolated remnant or recent introduction? Estimating the provenance of Yellingbo Leadbeater's possums by genetic analysis and bottleneck simulation. Mol Ecol 17: 4039-4052.
-
(2008)
Mol Ecol
, vol.17
, pp. 4039-4052
-
-
Hansen, B.D.1
Taylor, A.C.2
-
40
-
-
77952092867
-
Genetic rescue guidelines with examples from Mexican wolves and Florida panthers
-
Hedrick PW, Fredrickson R (2010) Genetic rescue guidelines with examples from Mexican wolves and Florida panthers. Conserv Genet 11: 615-626.
-
(2010)
Conserv Genet
, vol.11
, pp. 615-626
-
-
Hedrick, P.W.1
Fredrickson, R.2
-
42
-
-
34347357663
-
Does habitat fragmentation reduce fitness and adaptability? A case study of the common frog (Rana temporaria)
-
Johansson M, Primmer CR, Merilä J (2007) Does habitat fragmentation reduce fitness and adaptability? A case study of the common frog (Rana temporaria). Mol Ecol 16: 2693-2700.
-
(2007)
Mol Ecol
, vol.16
, pp. 2693-2700
-
-
Johansson, M.1
Primmer, C.R.2
Merilä, J.3
-
43
-
-
0033984665
-
Measuring and interpreting genetic structure to minimize the genetic risks of translocations
-
Johnson MS (2000) Measuring and interpreting genetic structure to minimize the genetic risks of translocations. Aquacult Res 31: 133-143.
-
(2000)
Aquacult Res
, vol.31
, pp. 133-143
-
-
Johnson, M.S.1
-
44
-
-
14844358868
-
HP-RARE 1.0: a computer program for performing rarefaction on measures of allelic richness
-
Kalinowski ST (2005) HP-RARE 1. 0: a computer program for performing rarefaction on measures of allelic richness. Mol Ecol Notes 5: 187-189.
-
(2005)
Mol Ecol Notes
, vol.5
, pp. 187-189
-
-
Kalinowski, S.T.1
-
45
-
-
0036568655
-
Inbreeding effects in wild populations
-
Keller LF, Waller DM (2002) Inbreeding effects in wild populations. Trends Ecol Evol 17: 230-241.
-
(2002)
Trends Ecol Evol
, vol.17
, pp. 230-241
-
-
Keller, L.F.1
Waller, D.M.2
-
46
-
-
0038176583
-
Mapping of rabbit microsatellite markers using chromosome-specific libraries
-
Korstanje R, Gillissen GF, Versteeg SA, van Oost BA, Bosma AA, Rogel-Gaillard C, van Zutphen LFM, van Lith HA (2003) Mapping of rabbit microsatellite markers using chromosome-specific libraries. J Hered 94: 161-169.
-
(2003)
J Hered
, vol.94
, pp. 161-169
-
-
Korstanje, R.1
Gillissen, G.F.2
Versteeg, S.A.3
van Oost, B.A.4
Bosma, A.A.5
Rogel-Gaillard, C.6
van Zutphen, L.F.M.7
van Lith, H.A.8
-
47
-
-
1642546893
-
Evaluation of fecal mtDNA analysis as a method to determine the geographic distribution of a rare lagomorph
-
Kovach AI, Litvaitis MK, Litvaitis JA (2003) Evaluation of fecal mtDNA analysis as a method to determine the geographic distribution of a rare lagomorph. Wildl Soc Bull 31: 1061-1065.
-
(2003)
Wildl Soc Bull
, vol.31
, pp. 1061-1065
-
-
Kovach, A.I.1
Litvaitis, M.K.2
Litvaitis, J.A.3
-
48
-
-
0036900319
-
Isolation and characterization of six polymorphic microsatellite loci in South African hares (Lepus saxatilis F. Cuvier, 1823 and Lepus capensis Linnaeus, 1758)
-
Kryger U, Robinson TJ, Bloomer P (2002) Isolation and characterization of six polymorphic microsatellite loci in South African hares (Lepus saxatilis F. Cuvier, 1823 and Lepus capensis Linnaeus, 1758). Mol Ecol Notes 2: 422-424.
-
(2002)
Mol Ecol Notes
, vol.2
, pp. 422-424
-
-
Kryger, U.1
Robinson, T.J.2
Bloomer, P.3
-
49
-
-
33745041278
-
Relative performance of Bayesian clustering software for inferring population substructure and individual assignment at low levels of population differentiation
-
Latch EK, Dharmarajan G, Glaubitz JC, Rhodes OE Jr (2006) Relative performance of Bayesian clustering software for inferring population substructure and individual assignment at low levels of population differentiation. Conserv Genet 7: 295-302.
-
(2006)
Conserv Genet
, vol.7
, pp. 295-302
-
-
Latch, E.K.1
Dharmarajan, G.2
Glaubitz, J.C.3
Rhodes Jr., O.E.4
-
51
-
-
0027331656
-
Response of early successional vertebrates to historic changes in land use
-
Litvaitis JA (1993) Response of early successional vertebrates to historic changes in land use. Conserv Biol 7: 866-873.
-
(1993)
Conserv Biol
, vol.7
, pp. 866-873
-
-
Litvaitis, J.A.1
-
52
-
-
0034959244
-
Importance of early successional habitats to mammals in eastern forests
-
Litvaitis JA (2001) Importance of early successional habitats to mammals in eastern forests. Wildl Soc Bull 29: 466-473.
-
(2001)
Wildl Soc Bull
, vol.29
, pp. 466-473
-
-
Litvaitis, J.A.1
-
53
-
-
0042723352
-
Are pre-Columbian conditions relevant baselines for managed forests in the northeastern United States?
-
Litvaitis JA (2003) Are pre-Columbian conditions relevant baselines for managed forests in the northeastern United States? For Ecol Manage 185: 113-126.
-
(2003)
For Ecol Manage
, vol.185
, pp. 113-126
-
-
Litvaitis, J.A.1
-
55
-
-
0030301017
-
Using mitochondrial DNA to inventory the distribution of remnant populations of New England cottontails
-
Litvaitis MK, Litvaitis JA (1996) Using mitochondrial DNA to inventory the distribution of remnant populations of New England cottontails. Wildl Soc Bull 24: 725-730.
-
(1996)
Wildl Soc Bull
, vol.24
, pp. 725-730
-
-
Litvaitis, M.K.1
Litvaitis, J.A.2
-
56
-
-
0030301023
-
Factors affecting the persistence of New England cottontail metapopulations: the role of habitat management
-
Litvaitis JA, Villafuerte R (1996) Factors affecting the persistence of New England cottontail metapopulations: the role of habitat management. Wildl Soc Bull 24: 686-693.
-
(1996)
Wildl Soc Bull
, vol.24
, pp. 686-693
-
-
Litvaitis, J.A.1
Villafuerte, R.2
-
57
-
-
0042572149
-
Distribution and habitat features associated with remnant populations of New England cottontails in Maine
-
Litvaitis JA, Johnson B, Jakubas W, Morris K (2003) Distribution and habitat features associated with remnant populations of New England cottontails in Maine. Can J Zool 81: 877-887.
-
(2003)
Can J Zool
, vol.81
, pp. 877-887
-
-
Litvaitis, J.A.1
Johnson, B.2
Jakubas, W.3
Morris, K.4
-
58
-
-
33845944067
-
A range-wide survey to determine the current distribution of New England cottontails
-
Litvaitis JA, Tash JP, Litvaitis MK, Marchand MN, Kovach AI, Innes R (2006) A range-wide survey to determine the current distribution of New England cottontails. Wildl Soc Bull 34: 1190-1197.
-
(2006)
Wildl Soc Bull
, vol.34
, pp. 1190-1197
-
-
Litvaitis, J.A.1
Tash, J.P.2
Litvaitis, M.K.3
Marchand, M.N.4
Kovach, A.I.5
Innes, R.6
-
59
-
-
79957633460
-
Testing multiple hypotheses to identify causes of the decline of a lagomorph species: the New England cottontail as a case study
-
P. Alves and K. Hacklander (Eds.), New York: Springer-Verlag
-
Litvaitis JA, Barbour MS, Brown AL, Kovach AI, Oehler JD, Probert BL, Smith DF, Tash JP, Villafuerte R, Litvaitis MK (2008) Testing multiple hypotheses to identify causes of the decline of a lagomorph species: the New England cottontail as a case study. In: Alves P, Hacklander K (eds) Biology of lagomorphs-evolution, ecology and conservation. Springer-Verlag, New York, pp 167-185.
-
(2008)
Biology of Lagomorphs-Evolution, Ecology and Conservation
, pp. 167-185
-
-
Litvaitis, J.A.1
Barbour, M.S.2
Brown, A.L.3
Kovach, A.I.4
Oehler, J.D.5
Probert, B.L.6
Smith, D.F.7
Tash, J.P.8
Villafuerte, R.9
Litvaitis, M.K.10
-
61
-
-
0031866781
-
Distortion of allele frequency distributions provides a test for recent population bottlenecks
-
Luikart G, Allendorf FW, Cornuet JM, Sherwin WB (1998) Distortion of allele frequency distributions provides a test for recent population bottlenecks. J Hered 89: 238-247.
-
(1998)
J Hered
, vol.89
, pp. 238-247
-
-
Luikart, G.1
Allendorf, F.W.2
Cornuet, J.M.3
Sherwin, W.B.4
-
62
-
-
0001921823
-
The critical effective size for a genetically secure population
-
Lynch M, Lande R (1998) The critical effective size for a genetically secure population. Anim Conserv 1: 70-72.
-
(1998)
Anim Conserv
, vol.1
, pp. 70-72
-
-
Lynch, M.1
Lande, R.2
-
63
-
-
0036006021
-
Heterosis and outbreeding depression in descendants of natural immigrants to an inbred population of song sparrows (Melospiza melodia)
-
Marr AB, Keller LF, Arcese P (2002) Heterosis and outbreeding depression in descendants of natural immigrants to an inbred population of song sparrows (Melospiza melodia). Evolution 56: 131-142.
-
(2002)
Evolution
, vol.56
, pp. 131-142
-
-
Marr, A.B.1
Keller, L.F.2
Arcese, P.3
-
64
-
-
0036006354
-
Microsatellite DNA and recent statistical methods in wildlife conservation management: applications in Alpine ibex [Capra ibex (ibex)]
-
Maudet C, Miller C, Bassano B, Breitenmoser-Würsten C, Gauthier D, Obexer-Ruff G, Michallet J, Taberlet P, Luikart G (2002) Microsatellite DNA and recent statistical methods in wildlife conservation management: applications in Alpine ibex [Capra ibex (ibex)]. Mol Ecol 11: 421-436.
-
(2002)
Mol Ecol
, vol.11
, pp. 421-436
-
-
Maudet, C.1
Miller, C.2
Bassano, B.3
Breitenmoser-Würsten, C.4
Gauthier, D.5
Obexer-Ruff, G.6
Michallet, J.7
Taberlet, P.8
Luikart, G.9
-
65
-
-
28344451235
-
DROPOUT: a program to identify problem loci and samples for noninvasive genetic samples in a capture-mark-recapture framework
-
McKelvey KS, Schwartz MK (2005) DROPOUT: a program to identify problem loci and samples for noninvasive genetic samples in a capture-mark-recapture framework. Mol Ecol Notes 5: 716-718.
-
(2005)
Mol Ecol Notes
, vol.5
, pp. 716-718
-
-
McKelvey, K.S.1
Schwartz, M.K.2
-
66
-
-
0031080705
-
Nine polymorphic microsatellite loci in the rabbit, Oryctolagus cuniculus
-
Mougel F, Mounolou JC, Monnerot M (1997) Nine polymorphic microsatellite loci in the rabbit, Oryctolagus cuniculus. Anim Genet 28: 58-59.
-
(1997)
Anim Genet
, vol.28
, pp. 58-59
-
-
Mougel, F.1
Mounolou, J.C.2
Monnerot, M.3
-
67
-
-
70349255569
-
-
R package version 1. 17-4, Accessed Oct 2010
-
Oksanen F, Blanchet FG, Kindt R, Legendre P, O'Hara RB, Simpson GL, Solymos P, Stevens MHH, Wagner H (2010) vegan: community ecology package. R package version 1. 17-4 http://CRAN. R-project. org/package=vegan. Accessed Oct 2010.
-
(2010)
vegan: community ecology package
-
-
Oksanen, F.1
Blanchet, F.G.2
Kindt, R.3
Legendre, P.4
O'Hara, R.B.5
Simpson, G.L.6
Solymos, P.7
Stevens, M.H.H.8
Wagner, H.9
-
68
-
-
1642442709
-
Genetic assignment methods for the direct, real-time estimation of migration rate: a simulation-based exploration of accuracy and power
-
Paetkau D, Slade R, Burden M, Estoup A (2004) Genetic assignment methods for the direct, real-time estimation of migration rate: a simulation-based exploration of accuracy and power. Mol Ecol 13: 55-65.
-
(2004)
Mol Ecol
, vol.13
, pp. 55-65
-
-
Paetkau, D.1
Slade, R.2
Burden, M.3
Estoup, A.4
-
69
-
-
47649115949
-
Genetic estimates of contemporary effective population size: what can they tell us about the importance of genetic stochasticity for wild population persistence?
-
Palstra FP, Ruzzante DE (2008) Genetic estimates of contemporary effective population size: what can they tell us about the importance of genetic stochasticity for wild population persistence? Mol Ecol 17: 3428-3447.
-
(2008)
Mol Ecol
, vol.17
, pp. 3428-3447
-
-
Palstra, F.P.1
Ruzzante, D.E.2
-
70
-
-
79960602268
-
Digital distribution maps of the mammals of the western hemisphere, version 3. 0. NatureServe, Arlington, Virginia, USA
-
The Nature Conservancy-migratory bird program, conservation international-CABS, World Wildlife Fund-US, and Environment Canada-WILDSPACE
-
Patterson BD, Ceballos G, Sechrest W, Tognelli MF, Brooks T, Luna L, Ortega P, Salazar I, Young BE (2007) Digital distribution maps of the mammals of the western hemisphere, version 3. 0. NatureServe, Arlington, Virginia, USA. Data provided by NatureServe in collaboration with Bruce Patterson, Wes Sechrest, Marcelo Tognelli, Gerardo Ceballos, The Nature Conservancy-migratory bird program, conservation international-CABS, World Wildlife Fund-US, and Environment Canada-WILDSPACE.
-
(2007)
Data provided by NatureServe in collaboration with Bruce Patterson, Wes Sechrest, Marcelo Tognelli, Gerardo Ceballos
-
-
Patterson, B.D.1
Ceballos, G.2
Sechrest, W.3
Tognelli, M.F.4
Brooks, T.5
Luna, L.6
Ortega, P.7
Salazar, I.8
Young, B.E.9
-
71
-
-
0032880393
-
BOTTLENECK: a computer program for detecting recent reductions in the effective population size using allele frequency data
-
Piry S, Luikart G, Cornuet JM (1999) BOTTLENECK: a computer program for detecting recent reductions in the effective population size using allele frequency data. J Hered 90: 502-503.
-
(1999)
J Hered
, vol.90
, pp. 502-503
-
-
Piry, S.1
Luikart, G.2
Cornuet, J.M.3
-
72
-
-
6044264968
-
GENECLASS2: a software for genetic assignment and first-generation migrant detection
-
Piry S, Alapetite A, Cornuet JM, Paetkau D, Baudouin L, Estoup A (2004) GENECLASS2: a software for genetic assignment and first-generation migrant detection. J Hered 95: 536-539.
-
(2004)
J Hered
, vol.95
, pp. 536-539
-
-
Piry, S.1
Alapetite, A.2
Cornuet, J.M.3
Paetkau, D.4
Baudouin, L.5
Estoup, A.6
-
73
-
-
30044440451
-
Genotyping errors: causes, consequences and solutions
-
Pompanon F, Bonin A, Bellemain E, Taberlet P (2005) Genotyping errors: causes, consequences and solutions. Nat Rev Genet 6: 847-859.
-
(2005)
Nat Rev Genet
, vol.6
, pp. 847-859
-
-
Pompanon, F.1
Bonin, A.2
Bellemain, E.3
Taberlet, P.4
-
74
-
-
0034118493
-
Inference of population structure using multilocus genotype data
-
Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
-
(2000)
Genetics
, vol.155
, pp. 945-959
-
-
Pritchard, J.K.1
Stephens, M.2
Donnelly, P.3
-
75
-
-
5344244656
-
-
R Development Core Team, Vienna, Austria. Available from:
-
R Development Core Team (2006) R: a language and environment for statistical computing. Vienna, Austria. Available from: http://www. R-project. org.
-
(2006)
R: a language and environment for statistical computing
-
-
-
76
-
-
0030835444
-
Detecting immigration by using multilocus genotypes
-
Rannala B, Mountain JL (1997) Detecting immigration by using multilocus genotypes. Proc Natl Acad Sci USA 94: 9197-9201.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 9197-9201
-
-
Rannala, B.1
Mountain, J.L.2
-
77
-
-
0000262278
-
GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism
-
Raymond M, Rousset F (1995) GENEPOP (version 1. 2): population genetics software for exact tests and ecumenicism. J Hered 86: 248-249.
-
(1995)
J Hered
, vol.86
, pp. 248-249
-
-
Raymond, M.1
Rousset, F.2
-
78
-
-
13444284761
-
Extinction risk in fragmented habitats
-
Reed DH (2004) Extinction risk in fragmented habitats. Anim Conserv 7: 181-191.
-
(2004)
Anim Conserv
, vol.7
, pp. 181-191
-
-
Reed, D.H.1
-
79
-
-
0037329527
-
Correlation between fitness and genetic diversity
-
Reed DH, Frankham R (2003) Correlation between fitness and genetic diversity. Conserv Biol 17: 230-237.
-
(2003)
Conserv Biol
, vol.17
, pp. 230-237
-
-
Reed, D.H.1
Frankham, R.2
-
80
-
-
0028523058
-
Four polymorphic microsatellite loci for the European wild rabbit, Oryctolagus cuniculus
-
Rico C, Rico I, Webb N, Smith S, Bell D, Hewitt G (1994) Four polymorphic microsatellite loci for the European wild rabbit, Oryctolagus cuniculus. Anim Genet 25: 367.
-
(1994)
Anim Genet
, vol.25
, pp. 367
-
-
Rico, C.1
Rico, I.2
Webb, N.3
Smith, S.4
Bell, D.5
Hewitt, G.6
-
81
-
-
61849171932
-
Why sampling scheme matters: the effect of sampling scheme on landscape genetic results
-
Schwartz MK, McKelvey KS (2009) Why sampling scheme matters: the effect of sampling scheme on landscape genetic results. Conserv Genet 10: 441-452.
-
(2009)
Conserv Genet
, vol.10
, pp. 441-452
-
-
Schwartz, M.K.1
McKelvey, K.S.2
-
82
-
-
0037631074
-
From connectivity to isolation: genetic consequences of population fragmentation in capercaillie across Europe
-
Segelbacher G, Höglund J, Storch I (2003) From connectivity to isolation: genetic consequences of population fragmentation in capercaillie across Europe. Mol Ecol 12: 1773-1780.
-
(2003)
Mol Ecol
, vol.12
, pp. 1773-1780
-
-
Segelbacher, G.1
Höglund, J.2
Storch, I.3
-
83
-
-
77952096687
-
Applications of landscape genetics in conservation biology: concepts and challenges
-
Segelbacher G, Cushman SA, Epperson BK, Fortin M, Francois O, Hardy OJ, Holdregger R, Taberlet P, Waits LP, Manel S (2010) Applications of landscape genetics in conservation biology: concepts and challenges. Conserv Genet 11: 375-385.
-
(2010)
Conserv Genet
, vol.11
, pp. 375-385
-
-
Segelbacher, G.1
Cushman, S.A.2
Epperson, B.K.3
Fortin, M.4
Francois, O.5
Hardy, O.J.6
Holdregger, R.7
Taberlet, P.8
Waits, L.P.9
Manel, S.10
-
84
-
-
0037189660
-
Relationships between genetic variation measured by microsatellite DNA markers and a fitness-related trait in the guppy (Poecilia reticulata)
-
Shikano T, Taniguchi N (2002) Relationships between genetic variation measured by microsatellite DNA markers and a fitness-related trait in the guppy (Poecilia reticulata). Aquaculture 209: 77-90.
-
(2002)
Aquaculture
, vol.209
, pp. 77-90
-
-
Shikano, T.1
Taniguchi, N.2
-
85
-
-
0034702748
-
Inbreeding depression influences lifetime breeding success in a wild population of red deer (Cervus elaphus)
-
Slate J, Kruuk LEB, Marshall TC, Pemberton JM, Clutton-Brock TH (2000) Inbreeding depression influences lifetime breeding success in a wild population of red deer (Cervus elaphus). Proc R Soc Lond Ser B Biol Sci 267: 1657-1662.
-
(2000)
Proc R Soc Lond Ser B Biol Sci
, vol.267
, pp. 1657-1662
-
-
Slate, J.1
Kruuk, L.E.B.2
Marshall, T.C.3
Pemberton, J.M.4
Clutton-Brock, T.H.5
-
87
-
-
0002939299
-
Thresholds for survival: maintaining fitness and evolutionary potential
-
M. E. Soulé and B. A. Wilcox (Eds.), Sunderland: Sinauer Associates
-
Soulé ME (1980) Thresholds for survival: maintaining fitness and evolutionary potential. In: Soulé ME, Wilcox BA (eds) Conservation biology: an evolutionary-ecological perspective. Sinauer Associates, Sunderland, pp 151-169.
-
(1980)
Conservation Biology: An Evolutionary-Ecological Perspective
, pp. 151-169
-
-
Soulé, M.E.1
-
88
-
-
0031213927
-
Polymorphic microsatellite loci in the European rabbit (Oryctolagus cuniculus) are also amplified in other lagomorph species
-
Surridge AK, Bell DJ, Rico C, Hewitt GM (1997) Polymorphic microsatellite loci in the European rabbit (Oryctolagus cuniculus) are also amplified in other lagomorph species. Anim Genet 28: 302-305.
-
(1997)
Anim Genet
, vol.28
, pp. 302-305
-
-
Surridge, A.K.1
Bell, D.J.2
Rico, C.3
Hewitt, G.M.4
-
89
-
-
0029757281
-
Reliable genotyping of samples with very low DNA quantities using PCR
-
Taberlet P, Griffin S, Goossens B, Questiau S, Manceau V, Escaravage N, Waits LP, Bouvet J (1996) Reliable genotyping of samples with very low DNA quantities using PCR. Nucleic Acids Res 24: 3189-3194.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 3189-3194
-
-
Taberlet, P.1
Griffin, S.2
Goossens, B.3
Questiau, S.4
Manceau, V.5
Escaravage, N.6
Waits, L.P.7
Bouvet, J.8
-
90
-
-
38949178372
-
ONeSAMP: a program to estimate effective population size using approximate Bayesian computation
-
Tallmon DA, Koyuk A, Luikart G, Beaumont MA (2008) ONeSAMP: a program to estimate effective population size using approximate Bayesian computation. Mol Ecol Resour 8: 299-301.
-
(2008)
Mol Ecol Resour
, vol.8
, pp. 299-301
-
-
Tallmon, D.A.1
Koyuk, A.2
Luikart, G.3
Beaumont, M.A.4
-
91
-
-
34249323413
-
Characteristics of occupied habitats and identification of sites for restoration and translocation of New England cottontail populations
-
Tash JP, Litvaitis JA (2007) Characteristics of occupied habitats and identification of sites for restoration and translocation of New England cottontail populations. Biol Conserv 137: 584-598.
-
(2007)
Biol Conserv
, vol.137
, pp. 584-598
-
-
Tash, J.P.1
Litvaitis, J.A.2
-
93
-
-
79960589211
-
-
USFWS, United States Fish and Wildlife Service, New England Field Office, Concord, New Hampshire, Accessed 15 Feb 2010
-
USFWS (2009) New England cottontail (Sylvilagus transitionalis) spotlight species action plan. United States Fish and Wildlife Service, New England Field Office, Concord, New Hampshire. http://ecos. fws. gov/docs/action_plans/doc3081. pdf. Accessed 15 Feb 2010.
-
(2009)
New England cottontail (Sylvilagus transitionalis) spotlight species action plan
-
-
-
94
-
-
4344606590
-
MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data
-
van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4: 535-538.
-
(2004)
Mol Ecol Notes
, vol.4
, pp. 535-538
-
-
van Oosterhout, C.1
Hutchinson, W.F.2
Wills, D.P.M.3
Shipley, P.4
-
95
-
-
14844299375
-
Implementing false discovery rate control: increasing your power
-
Verhoeven KJF, Simonsen KL, McIntyre LM (2005) Implementing false discovery rate control: increasing your power. Oikos 108: 643-647.
-
(2005)
Oikos
, vol.108
, pp. 643-647
-
-
Verhoeven, K.J.F.1
Simonsen, K.L.2
McIntyre, L.M.3
-
96
-
-
0035144122
-
Estimating the probability of identity among genotypes in natural populations: cautions and guidelines
-
Waits LP, Luikart G, Taberlet P (2001) Estimating the probability of identity among genotypes in natural populations: cautions and guidelines. Mol Ecol 10: 249-256.
-
(2001)
Mol Ecol
, vol.10
, pp. 249-256
-
-
Waits, L.P.1
Luikart, G.2
Taberlet, P.3
-
97
-
-
41149095553
-
Evidence for habitat fragmentation altering within-population processes in wombats
-
Walker FM, Sunnucks P, Taylor AC (2008) Evidence for habitat fragmentation altering within-population processes in wombats. Mol Ecol 17: 1674-1684.
-
(2008)
Mol Ecol
, vol.17
, pp. 1674-1684
-
-
Walker, F.M.1
Sunnucks, P.2
Taylor, A.C.3
-
98
-
-
33745015584
-
A bias correction for estimates of effective population size based on linkage disequilibrium at unlinked gene loci
-
Waples RS (2006) A bias correction for estimates of effective population size based on linkage disequilibrium at unlinked gene loci. Conserv Genet 7: 167-184.
-
(2006)
Conserv Genet
, vol.7
, pp. 167-184
-
-
Waples, R.S.1
-
99
-
-
34248139711
-
Genetic diversity and population size: island populations of the common shrew, Sorex araneus
-
White TA, Searle JB (2007) Genetic diversity and population size: island populations of the common shrew, Sorex araneus. Mol Ecol 16: 2005-2016.
-
(2007)
Mol Ecol
, vol.16
, pp. 2005-2016
-
-
White, T.A.1
Searle, J.B.2
-
101
-
-
30144439114
-
Comparison of methods for detecting bottlenecks from microsatellite loci
-
Williamson-Natesan EG (2005) Comparison of methods for detecting bottlenecks from microsatellite loci. Conserv Genet 6: 551-562.
-
(2005)
Conserv Genet
, vol.6
, pp. 551-562
-
-
Williamson-Natesan, E.G.1
-
102
-
-
50049087512
-
Inbreeding, inbreeding depression and extinction
-
Wright LI, Tregenza T, Hosken DJ (2008) Inbreeding, inbreeding depression and extinction. Conserv Genet 9: 833-843.
-
(2008)
Conserv Genet
, vol.9
, pp. 833-843
-
-
Wright, L.I.1
Tregenza, T.2
Hosken, D.J.3
-
103
-
-
74749107684
-
Habitat fragmentation affects genetic diversity and differentiation of the Yarkand hare
-
Wu Y, Xia L, Zhang Q, Yang Q (2010) Habitat fragmentation affects genetic diversity and differentiation of the Yarkand hare. Conserv Genet 11: 183-194.
-
(2010)
Conserv Genet
, vol.11
, pp. 183-194
-
-
Wu, Y.1
Xia, L.2
Zhang, Q.3
Yang, Q.4
-
104
-
-
33745922899
-
Experimental habitat fragmentation increases linkage disequilibrium but does not affect genetic diversity or population structure in the Amazonian liverwort Radula flaccida
-
Zartman CE, McDaniel SF, Jonathan Shaw A (2006) Experimental habitat fragmentation increases linkage disequilibrium but does not affect genetic diversity or population structure in the Amazonian liverwort Radula flaccida. Mol Ecol 15: 2305-2315.
-
(2006)
Mol Ecol
, vol.15
, pp. 2305-2315
-
-
Zartman, C.E.1
McDaniel, S.F.2
Jonathan Shaw, A.3
|