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Volumn 107, Issue 2, 2012, Pages 254-261

Genetic diversity of NS3 protease from Brazilian HCV isolates and possible implications for therapy with direct-acting antiviral drugs

Author keywords

Direct acting antiviral agents; Genetic diversity; Hepatitis C virus; NS3 protease

Indexed keywords

HEPATITIS C VIRUS;

EID: 84857956447     PISSN: 00740276     EISSN: 16788060     Source Type: Journal    
DOI: 10.1590/S0074-02762012000200016     Document Type: Article
Times cited : (22)

References (34)
  • 1
    • 34250679750 scopus 로고    scopus 로고
    • Epidemiology of hepatitis C virus infection
    • Alter MJ 2007. Epidemiology of hepatitis C virus infection. World J Gastroenterol 13: 2436-2441.
    • (2007) World J Gastroenterol , vol.13 , pp. 2436-2441
    • Alter, M.J.1
  • 2
    • 33745256005 scopus 로고    scopus 로고
    • Approximate likelihood-ratio test for branches: A fast, accurate and powerful alternative
    • Anisimova M, Gascuel O 2006. Approximate likelihood-ratio test for branches: a fast, accurate and powerful alternative. Syst Biol 55: 539-552.
    • (2006) Syst Biol , vol.55 , pp. 539-552
    • Anisimova, M.1    Gascuel, O.2
  • 3
    • 78650928878 scopus 로고    scopus 로고
    • New direct-acting antivirals' combination for the treatment of chronic hepatitis C
    • Asselah T, Marcellin P 2011. New direct-acting antivirals' combination for the treatment of chronic hepatitis C. Liver Int 31: 68-77.
    • (2011) Liver Int , vol.31 , pp. 68-77
    • Asselah, T.1    Marcellin, P.2
  • 5
    • 77949514845 scopus 로고    scopus 로고
    • Hepatitis C virus (HCV) genotype 1 subtype identification in new HCV drug development and future clinical practice
    • Chevaliez S, Bouvier-Alias M, Brillet R, Pawlotsky JM 2009. Hepatitis C virus (HCV) genotype 1 subtype identification in new HCV drug development and future clinical practice. PLoS ONE 4: e8209.
    • (2009) PLoS ONE , vol.4
    • Chevaliez, S.1    Bouvier-Alias, M.2    Brillet, R.3    Pawlotsky, J.M.4
  • 8
    • 0037687422 scopus 로고    scopus 로고
    • Regulation of interferon regulatory factor-3 by the hepatitis C virus serine protease
    • Foy E, Li K, Wang C, Sumpter R Jr, Ikeda M, Lemon SM, Gale M Jr 2003. Regulation of interferon regulatory factor-3 by the hepatitis C virus serine protease. Science 300: 1145-1148.
    • (2003) Science , vol.300 , pp. 1145-1148
    • Foy, E.1    Li, K.2    Wang, C.3    Sumpter Jr., R.4    Ikeda, M.5    Lemon, S.M.6    Gale Jr., M.7
  • 9
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S, Gascuel O 2003. A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52: 696-704.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 10
    • 0002222776 scopus 로고    scopus 로고
    • HIV signature and sequence variation analysis
    • In AG Rodrigo, GH Learn, Kluwer Academic Publishers, Netherlands
    • Korber B 2000. HIV signature and sequence variation analysis. In AG Rodrigo, GH Learn, Computational analysis of HIV molecular sequences, Kluwer Academic Publishers, Netherlands, p. 55-72.
    • (2000) Computational Analysis of HIV Molecular Sequences , pp. 55-72
    • Korber, B.1
  • 11
    • 0026739607 scopus 로고
    • Signature pattern analysis: A method for assessing viral sequence relatedness
    • Korber B, Myers G 1992. Signature pattern analysis: a method for assessing viral sequence relatedness. AIDS Res Hum Retroviruses 8: 1549-1560.
    • (1992) AIDS Res Hum Retroviruses , vol.8 , pp. 1549-1560
    • Korber, B.1    Myers, G.2
  • 13
    • 36549020078 scopus 로고    scopus 로고
    • Hepatitis C virus NS3/4A protein interacts with ATM, impairs DNA repair and enhances sensitivity to ionizing radiation
    • Lai CK, Jeng KS, Machida K, Cheng YS, Lai MM 2008. Hepatitis C virus NS3/4A protein interacts with ATM, impairs DNA repair and enhances sensitivity to ionizing radiation. Virology 370: 295-309.
    • (2008) Virology , vol.370 , pp. 295-309
    • Lai, C.K.1    Jeng, K.S.2    Machida, K.3    Cheng, Y.S.4    Lai, M.M.5
  • 15
    • 59149085501 scopus 로고    scopus 로고
    • The global burden of hepatitis C
    • Lavanchy D 2009. The global burden of hepatitis C. Liver Int 29: 74-81.
    • (2009) Liver Int , vol.29 , pp. 74-81
    • Lavanchy, D.1
  • 17
    • 47649116685 scopus 로고    scopus 로고
    • Mapping natural polymorphisms of hepatitis C virus NS3/4A protease and antiviral resistance to inhibitors in worldwide isolates
    • López-Labrador FX, Moya A, González-Candelas F 2008. Mapping natural polymorphisms of hepatitis C virus NS3/4A protease and antiviral resistance to inhibitors in worldwide isolates. Antivir Ther 13: 481-494.
    • (2008) Antivir Ther , vol.13 , pp. 481-494
    • López-Labrador, F.X.1    Moya, A.2    González-Candelas, F.3
  • 19
    • 27144440476 scopus 로고    scopus 로고
    • Cardif is an adaptor protein in the RIG-I antiviral pathway and is targeted by hepatitis C virus
    • Meylan E, Curran J, Hofmann K, Moradpour D, Binder M, Bartenschlager R, Tschopp J 2005. Cardif is an adaptor protein in the RIG-I antiviral pathway and is targeted by hepatitis C virus. Nature 437: 1167-1172.
    • (2005) Nature , vol.437 , pp. 1167-1172
    • Meylan, E.1    Curran, J.2    Hofmann, K.3    Moradpour, D.4    Binder, M.5    Bartenschlager, R.6    Tschopp, J.7
  • 20
    • 46049084854 scopus 로고    scopus 로고
    • A new genotype of hepatitis C vírus originating from Central Africa
    • Murphy D, Chamberland J, Dandavino R, Sablon E 2007. A new genotype of hepatitis C vírus originating from Central Africa. Hepatology 46: 623A.
    • (2007) Hepatology , vol.46
    • Murphy, D.1    Chamberland, J.2    Dandavino, R.3    Sablon, E.4
  • 21
    • 47249127753 scopus 로고    scopus 로고
    • Advances in genomic research on hepatitis C virus with a useful tool replicon system
    • Nakamura M, Saito H, Hibi T 2008. Advances in genomic research on hepatitis C virus with a useful tool replicon system. Keio J Med 57: 75-83.
    • (2008) Keio J Med , vol.57 , pp. 75-83
    • Nakamura, M.1    Saito, H.2    Hibi, T.3
  • 22
    • 0022507362 scopus 로고
    • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
    • Nei M, Gojobori T 1986. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol Biol Evol 3: 418-426.
    • (1986) Mol Biol Evol , vol.3 , pp. 418-426
    • Nei, M.1    Gojobori, T.2
  • 23
    • 77951954363 scopus 로고    scopus 로고
    • Mutations in hepatitis C virus NS3 protease domain associated with resistance to specific protease inhibitors in antiviral therapy naïve patients
    • Peres-da-Silva A, de Almeida AJ, Lampe E 2010. Mutations in hepatitis C virus NS3 protease domain associated with resistance to specific protease inhibitors in antiviral therapy naïve patients. Arch Virol 155: 807-811.
    • (2010) Arch Virol , vol.155 , pp. 807-811
    • Peres-da-Silva, A.1    de Almeida, A.J.2    Lampe, E.3
  • 24
    • 79960937707 scopus 로고    scopus 로고
    • Evidence for separation of HCV subtype 1a into two distinct clades
    • Pickett BE, Striker R, Lefkowitz EJ 2011. Evidence for separation of HCV subtype 1a into two distinct clades. J Viral Hepat 18: 608-618.
    • (2011) J Viral Hepat , vol.18 , pp. 608-618
    • Pickett, B.E.1    Striker, R.2    Lefkowitz, E.J.3
  • 25
    • 0037517079 scopus 로고    scopus 로고
    • Side effects of therapy for chronic hepatitis C
    • Russo MW, Fried MW 2003. Side effects of therapy for chronic hepatitis C. Gastroenterology 124: 1711-1719.
    • (2003) Gastroenterology , vol.124 , pp. 1711-1719
    • Russo, M.W.1    Fried, M.W.2
  • 26
  • 27
    • 0028218513 scopus 로고
    • Identification of genotypes of hepatitis C virus by sequence comparisons in the core, E1 and NS-5 regions
    • Simmonds P, Smith DB, McOmish F, Yap PL, Kolberg J, Urdea MS, Holmes EC 1994. Identification of genotypes of hepatitis C virus by sequence comparisons in the core, E1 and NS-5 regions. J Gen Virol 75: 1053-1061.
    • (1994) J Gen Virol , vol.75 , pp. 1053-1061
    • Simmonds, P.1    Smith, D.B.2    McOmish, F.3    Yap, P.L.4    Kolberg, J.5    Urdea, M.S.6    Holmes, E.C.7
  • 28
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 29
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTALX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG 1997. The CLUSTALX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 31
    • 79955783742 scopus 로고    scopus 로고
    • A new model to produce infectious hepatitis C virus without the replication requirement
    • Triyatni M, Berger EA, Saunier B 2011. A new model to produce infectious hepatitis C virus without the replication requirement. PLoS Pathog 7: e1001333.
    • (2011) PLoS Pathog , vol.7
    • Triyatni, M.1    Berger, E.A.2    Saunier, B.3
  • 34
    • 69249221321 scopus 로고    scopus 로고
    • A novel combined vaccine candidate containing epitopes of HCV NS3, core and E1 proteins induces multi-specific immune responses in BALB/c mice
    • Zeng R, Li G, Ling S, Zhang H, Yao Z, Xiu B, He F, Huang R, Wei L 2009. A novel combined vaccine candidate containing epitopes of HCV NS3, core and E1 proteins induces multi-specific immune responses in BALB/c mice. Antiviral Res 84: 23-30.
    • (2009) Antiviral Res , vol.84 , pp. 23-30
    • Zeng, R.1    Li, G.2    Ling, S.3    Zhang, H.4    Yao, Z.5    Xiu, B.6    He, F.7    Huang, R.8    Wei, L.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.