메뉴 건너뛰기




Volumn 38, Issue 1, 2012, Pages 27-48

Understanding the role of hydrogen bonds in water dynamics and protein stability

Author keywords

Biological interfaces; Confined water; Hydrated proteins; Protein denaturation; Water

Indexed keywords

HYDROGEN; POLYMER; PROTEIN; SURFACE WATER; WATER;

EID: 84857643980     PISSN: 00920606     EISSN: 15730689     Source Type: Journal    
DOI: 10.1007/s10867-011-9235-7     Document Type: Review
Times cited : (48)

References (101)
  • 1
    • 0037437224 scopus 로고    scopus 로고
    • On the temperature-pressure free-energy landscape of proteins
    • 10.1002/cphc.200390062
    • R Ravindra R Winter 2003 On the temperature-pressure free-energy landscape of proteins Chem. Phys. Chem. 4 359 365 10.1002/cphc.200390062
    • (2003) Chem. Phys. Chem. , vol.4 , pp. 359-365
    • Ravindra, R.1    Winter, R.2
  • 2
    • 0025125438 scopus 로고
    • Cold denaturation of proteins
    • 10.3109/10409239009090612
    • PL Privalov 1990 Cold denaturation of proteins Crit. Rev. Biochem. Mol. Biol. 25 281 305 10.3109/10409239009090612
    • (1990) Crit. Rev. Biochem. Mol. Biol. , vol.25 , pp. 281-305
    • Privalov, P.L.1
  • 3
    • 0029915110 scopus 로고    scopus 로고
    • Pressure-tuning the conformation of bovine pancreatic trypsin inhibitor studied by Fourier-transform infrared spectroscopy
    • K Goossens L Smeller J Frank K Heremans 1996 Pressure tuning spectroscopy of bovine pancreatic trypsin inhibitor: a high pressure FT-IR study Eur. J. Biochem. 236 254 262 10.1111/j.1432-1033.1996.00254.x (Pubitemid 26074880)
    • (1996) European Journal of Biochemistry , vol.236 , Issue.1 , pp. 254-262
    • Goossens, K.1    Smeller, L.2    Frank, J.3    Heremans, K.4
  • 4
    • 0031577539 scopus 로고    scopus 로고
    • Structure of the pressure-assisted cold denatured state of ubiquitin
    • DOI 10.1006/bbrc.1997.7308
    • D Nash J Jonas 1997 Structure of the pressure-assisted cold denatured state of ubiquitin Biochem. Biophys. Res. Commun. 238 289 291 10.1006/bbrc.1997.7308 (Pubitemid 27464372)
    • (1997) Biochemical and Biophysical Research Communications , vol.238 , Issue.2 , pp. 289-291
    • Nash, D.P.1    Jonas, J.2
  • 5
    • 0030664959 scopus 로고    scopus 로고
    • Structure of pressure-assisted cold denatured lysozyme and comparison with lysozyme folding intermediates
    • DOI 10.1021/bi970881v
    • D Nash J Jonas 1997 Structure of the pressure-assisted cold denatured lysozyme and comparison with lysozyme folding intermediates Biochemistry 36 14375 17383 10.1021/bi970881v (Pubitemid 27509929)
    • (1997) Biochemistry , vol.36 , Issue.47 , pp. 14375-14383
    • Nash, D.P.1    Jonas, J.2
  • 6
    • 0008823209 scopus 로고    scopus 로고
    • Pressure-assisted cold unfolding of proteins and its effects on the conformational stability compared to pressure and heat unfolding
    • 2000HPR.19.263M 10.1080/08957950008202563
    • F Meersman L Smeller K Heremans 2000 Pressure-assisted cold unfolding of proteins and its effects on the conformational stability compared to pressure and heat unfolding High Press Res. 19 263 268 2000HPR....19..263M 10.1080/08957950008202563
    • (2000) High Press Res. , vol.19 , pp. 263-268
    • Meersman, F.1    Smeller, L.2    Heremans, K.3
  • 9
    • 33749060930 scopus 로고    scopus 로고
    • Protein unfolding, amyloid fibril formation and configurational energy landscapes under high pressure conditions
    • DOI 10.1039/b517761h
    • F Meersman CM Dobson K Heremans 2006 Protein unfolding, amyloid fibril formation and configurational energy landscapes under high pressure conditions Chem. Soc. Rev. 35 908 917 10.1039/b517761h (Pubitemid 44465576)
    • (2006) Chemical Society Reviews , vol.35 , Issue.10 , pp. 908-917
    • Meersman, F.1    Dobson, C.M.2    Heremans, K.3
  • 10
    • 36849117971 scopus 로고
    • Free volume and entropy in condensed systems III. Entropy in binary liquid mixtures; Partial molal entropy in dilute solutions; Structure and thermodynamics in aqueous electrolytes
    • 1945JChPh.13.507F 10.1063/1.1723985
    • HS Frank MW Evans 1945 Free volume and entropy in condensed systems III. Entropy in binary liquid mixtures; partial molal entropy in dilute solutions; structure and thermodynamics in aqueous electrolytes J. Chem. Phys. 13 507 533 1945JChPh..13..507F 10.1063/1.1723985
    • (1945) J. Chem. Phys. , vol.13 , pp. 507-533
    • Frank, H.S.1    Evans, M.W.2
  • 11
    • 0025179832 scopus 로고
    • Protein folding
    • E Creighton 1990 Protein folding Biochem. J. 270 1 16
    • (1990) Biochem. J. , vol.270 , pp. 1-16
    • Creighton, E.1
  • 12
    • 0001843048 scopus 로고
    • Search for a realistic view of hydrophobic effects
    • 10.1021/ar00169a005
    • N Muller 1990 Search for a realistic view of hydrophobic effects Acc. Chem. Res. 23 23 28 10.1021/ar00169a005
    • (1990) Acc. Chem. Res. , vol.23 , pp. 23-28
    • Muller, N.1
  • 14
    • 0015236387 scopus 로고
    • Reversible pressure-temperature denaturation of chymotrypsinogen
    • 10.1021/bi00789a002
    • SA Hawley 1971 Reversible pressure-temperature denaturation of chymotrypsinogen Biochemistry 10 2436 2442 10.1021/bi00789a002
    • (1971) Biochemistry , vol.10 , pp. 2436-2442
    • Hawley, S.A.1
  • 16
    • 33645960997 scopus 로고    scopus 로고
    • Protein stability and dynamics in the pressure-temperature plane
    • 10.1016/j.bbapap.2005.11.019
    • F Meersman L Smeller K Heremans 2006 Protein stability and dynamics in the pressure-temperature plane Biochim. Biophys. Acta, Proteins Proteom. 1764 346 354 10.1016/j.bbapap.2005.11.019
    • (2006) Biochim. Biophys. Acta, Proteins Proteom. , vol.1764 , pp. 346-354
    • Meersman, F.1    Smeller, L.2    Heremans, K.3
  • 18
    • 0024750637 scopus 로고
    • A lattice statistical mechanics model of the conformational and sequence spaces of proteins
    • 1989MaMol.22.3986L 10.1021/ma00200a030
    • KF Lau KA Dill 1989 A lattice statistical mechanics model of the conformational and sequence spaces of proteins Macromolecules 22 3986 3997 1989MaMol..22.3986L 10.1021/ma00200a030
    • (1989) Macromolecules , vol.22 , pp. 3986-3997
    • Lau, K.F.1    Dill, K.A.2
  • 19
    • 0021098333 scopus 로고
    • Heat capacity of the solution for alcohols in polar solvents and the new view of hydrophobic effects
    • D Mirejovsky EM Arnett 1983 Heat capacity of the solution for alcohols in polar solvents and the new view of hydrophobic effects J. Am. Chem. Soc. 105 1112 1117 10.1021/ja00343a007 (Pubitemid 13528302)
    • (1983) Journal of the American Chemical Society , vol.105 , Issue.5 , pp. 1112-1117
    • Mirejovsky Dorla1    Arnett Edward, M.2
  • 20
    • 10644281621 scopus 로고
    • Molecular dynamics study of the hydration of Lennard-Jones solutes
    • 1979JChPh.70.263G 10.1063/1.437241
    • A Geiger A Rahman FH Stillinger 1979 Molecular dynamics study of the hydration of Lennard-Jones solutes J. Chem. Phys. 70 263 276 1979JChPh..70..263G 10.1063/1.437241
    • (1979) J. Chem. Phys. , vol.70 , pp. 263-276
    • Geiger, A.1    Rahman, A.2    Stillinger, F.H.3
  • 21
    • 0000209875 scopus 로고
    • Molecular dynamics study of methane hydration and methane association in a polarizable water phase
    • 10.1021/ja00055a038
    • D van Belle SJ Wodak 1993 Molecular dynamics study of methane hydration and methane association in a polarizable water phase J. Am. Chem. Soc. 115 647 652 10.1021/ja00055a038
    • (1993) J. Am. Chem. Soc. , vol.115 , pp. 647-652
    • Van Belle, D.1    Wodak, S.J.2
  • 22
    • 34250434907 scopus 로고
    • Structure in aqueous solutions of nonpolar solutes from the standpoint of scaled-particle theory
    • 10.1007/BF00651970
    • FH Stillinger 1973 Structure in aqueous solutions of nonpolar solutes from the standpoint of scaled-particle theory J. Solution Chem. 2 141 158 10.1007/BF00651970
    • (1973) J. Solution Chem. , vol.2 , pp. 141-158
    • Stillinger, F.H.1
  • 23
    • 84857659252 scopus 로고
    • J. Eisenfeld C. DiLisi (eds). Elsevier Amsterdam
    • Lee, B.: In: Eisenfeld, J., DiLisi, C. (eds.) An Anatomy of Hydrophobicity. Elsevier, Amsterdam (1985)
    • (1985) An Anatomy of Hydrophobicity
    • Lee, B.1
  • 24
    • 0026189147 scopus 로고
    • Solvent reorganization contribution to the transfer thermodynamics of small nonpolar molecules
    • 10.1002/bip.360310809
    • B Lee 1991 Solvent reorganization contribution to the transfer thermodynamics of small nonpolar molecules Biopolymers 31 993 1008 10.1002/bip.360310809
    • (1991) Biopolymers , vol.31 , pp. 993-1008
    • Lee, B.1
  • 25
    • 0027934912 scopus 로고
    • Role of hydrogen bonds in hydrophobicity: The free energy of cavity formation in water models with and without the hydrogen bonds
    • DOI 10.1016/0301-4622(94)00049-2
    • B Madan B Lee 1994 Role of hydrogen bonds in hydrophobicity: the free energy of cavity formation in water models with and without the hydrogen bonds Biophys. Chem. 51 279 289 10.1016/0301-4622(94)00049-2 (Pubitemid 24244006)
    • (1994) Biophysical Chemistry , vol.51 , Issue.2-3 , pp. 279-289
    • Madan, B.1    Lee, B.2
  • 26
    • 4243089023 scopus 로고
    • Solvent structure and perturbations in solutions of chemical and biological importance
    • JL Finney AK Soper 1994 Solvent structure and perturbations in solutions of chemical and biological importance Chem. Soc. Rev. 1 1 10 10.1039/cs9942300001 (Pubitemid 124000090)
    • (1994) Chemical Society Reviews , vol.23 , Issue.1 , pp. 1-10
    • Finney, J.L.1    Soper, A.K.2
  • 27
    • 0016814310 scopus 로고
    • Hydrophobic interaction and structural changes in the solvent
    • 10.1002/bip.1975.360140704
    • A Ben-Naim 1975 Hydrophobic interaction and structural changes in the solvent Biopolymers 14 1337 1355 10.1002/bip.1975.360140704
    • (1975) Biopolymers , vol.14 , pp. 1337-1355
    • Ben-Naim, A.1
  • 28
    • 0003714519 scopus 로고
    • Hard fluid model for molecular solvation free energies
    • 1994JChPh.101.9858D 10.1063/1.467951
    • LES de Souza DJ Ben-Amotz 1994 Hard fluid model for molecular solvation free energies J. Chem. Phys. 101 9858 9863 1994JChPh.101.9858D 10.1063/1.467951
    • (1994) J. Chem. Phys. , vol.101 , pp. 9858-9863
    • De Souza, L.E.S.1    Ben-Amotz, D.J.2
  • 29
    • 0029939483 scopus 로고    scopus 로고
    • A two-state model of hydrophobic hydration that produces compensating enthalpy and entropy changes
    • DOI 10.1021/ja9538389
    • B Lee G Graziano 1996 A two-state model of hydrophobic hydration that produces compensating enthalpy and entropy changes J. Am. Chem. Soc. 22 5163 5168 10.1021/ja9538389 (Pubitemid 26201539)
    • (1996) Journal of the American Chemical Society , vol.118 , Issue.22 , pp. 5163-5168
    • Lee, B.1    Graziano, G.2
  • 31
    • 0035684441 scopus 로고    scopus 로고
    • Cold and warm denaturation of proteins
    • DOI 10.1023/A:1013145009949
    • G Caldarelli PDL Rios 2001 Cold and warm denaturation of proteins J. Biol. Phys. 27 229 241 10.1023/A:1013145009949 (Pubitemid 34062486)
    • (2001) Journal of Biological Physics , vol.27 , Issue.2-3 , pp. 229-241
    • Caldarelli, G.1    De Los Rios, P.2
  • 33
    • 27544449360 scopus 로고    scopus 로고
    • Effective interactions between chaotropic agents and proteins
    • DOI 10.1002/prot.20626
    • G Salvi PDL Rios M Vendruscolo 2005 Effective interactions between chaotropic agents and proteins Proteins: Structure, Function, Bioinformatics 261 492 499 10.1002/prot.20626 (Pubitemid 41547405)
    • (2005) Proteins: Structure, Function and Genetics , vol.61 , Issue.3 , pp. 492-499
    • Salvi, G.1    De Los Rios, P.2    Vendruscolo, M.3
  • 34
    • 0001350204 scopus 로고    scopus 로고
    • Lattice model for cold and warm swelling of polymers in water
    • 2000PhRvE.61.2208B 10.1103/PhysRevE.61.R2208
    • P Bruscolini L Casetti 2001 Lattice model for cold and warm swelling of polymers in water Phys. Rev. E 61 2208 2211 2000PhRvE..61.2208B 10.1103/PhysRevE.61.R2208
    • (2001) Phys. Rev. e , vol.61 , pp. 2208-2211
    • Bruscolini, P.1    Casetti, L.2
  • 35
    • 0035510123 scopus 로고    scopus 로고
    • Bethe approximation for a model of polymer solvation
    • 2001PhRvE.64e1805B 10.1103/PhysRevE.64.051805
    • P Bruscolini L Casetti 2001 Bethe approximation for a model of polymer solvation Phys. Rev. E 64 51805 2001PhRvE..64e1805B 10.1103/PhysRevE.64.051805
    • (2001) Phys. Rev. e , vol.64 , pp. 51805
    • Bruscolini, P.1    Casetti, L.2
  • 36
    • 0029147930 scopus 로고
    • Energetics of protein structure
    • 10.1016/S0065-3233(08)60548-3
    • GI Makhatadze PL Privalov 1995 Energetics of protein structure Adv. Protein. Chem. 47 307 425 10.1016/S0065-3233(08)60548-3
    • (1995) Adv. Protein. Chem. , vol.47 , pp. 307-425
    • Makhatadze, G.I.1    Privalov, P.L.2
  • 37
    • 41149138184 scopus 로고    scopus 로고
    • Microscopic mechanism for cold denaturation
    • DOI 10.1103/PhysRevLett.100.118101
    • CL Dias T Ala-Nissila M Karttunen I Vattulainen M Grant 2008 Microscopic mechanism for cold denaturation Phys. Rev. Lett. 100 118101 2008PhRvL.100k8101D 10.1103/PhysRevLett.100.118101 (Pubitemid 351434247)
    • (2008) Physical Review Letters , vol.100 , Issue.11 , pp. 118101
    • Dias, C.L.1    Ala-Nissila, T.2    Karttunen, M.3    Vattulainen, I.4    Grant, M.5
  • 38
    • 0000232030 scopus 로고
    • Statistical mechanical study of hydrophobic interaction. I. Interaction between two identical nonpolar solute particles
    • 1971JChPh.54.1387B
    • AJ Ben-Naim 1971 Statistical mechanical study of hydrophobic interaction. I. Interaction between two identical nonpolar solute particles Chem. Phys. 54 1387 1971JChPh..54.1387B
    • (1971) Chem. Phys. , vol.54 , pp. 1387
    • Ben-Naim, A.J.1
  • 39
    • 65349114143 scopus 로고    scopus 로고
    • Hydrophobicity at low temperatures and cold denaturation of a protein
    • 2009PhRvE.79a1912Y 10.1103/PhysRevE.79.011912
    • T Yoshidome Y Harano M Kinoshita 2009 Hydrophobicity at low temperatures and cold denaturation of a protein Phys. Rev. E 79 11912 2009PhRvE..79a1912Y 10.1103/PhysRevE.79.011912
    • (2009) Phys. Rev. e , vol.79 , pp. 11912
    • Yoshidome, T.1    Harano, Y.2    Kinoshita, M.3
  • 40
    • 0001393298 scopus 로고
    • The solution of the reference hypernetted-chain approximation for water-like models
    • 1988MolPh.65.1105K 10.1080/00268978800101631
    • PG Kusalik GN Patey 1988 The solution of the reference hypernetted-chain approximation for water-like models Mol. Phys. 65 1105 1119 1988MolPh..65.1105K 10.1080/00268978800101631
    • (1988) Mol. Phys. , vol.65 , pp. 1105-1119
    • Kusalik, P.G.1    Patey, G.N.2
  • 41
    • 0011960339 scopus 로고    scopus 로고
    • Hydrophobicity at small and large length scales
    • 10.1021/jp984327m
    • K Lum D Chandler JD Weeks 1999 Hydrophobicity at small and large length scales J. Phys. Chem. B 103 4570 10.1021/jp984327m
    • (1999) J. Phys. Chem. B , vol.103 , pp. 4570
    • Lum, K.1    Chandler, D.2    Weeks, J.D.3
  • 43
    • 79951893060 scopus 로고    scopus 로고
    • An improved coarse-grained model of solvation and hydrophobic effect
    • 10.1063/1.3532939
    • P Varilly AJ Patel D Chandler 2011 An improved coarse-grained model of solvation and hydrophobic effect J. Chem. Phys. 134 74109 10.1063/1.3532939
    • (2011) J. Chem. Phys. , vol.134 , pp. 74109
    • Varilly, P.1    Patel, A.J.2    Chandler, D.3
  • 44
    • 0037434746 scopus 로고    scopus 로고
    • On the water-carbon interaction for use in molecular dynamics simulations of graphite and carbon nanotubes
    • 10.1021/jp0268112
    • T Werder JH Walther RL Jaffe T Halicioglu P Koumoutsakos 2003 On the water-carbon interaction for use in molecular dynamics simulations of graphite and carbon nanotubes J. Phys. Chem. B 107 1345 1352 10.1021/jp0268112
    • (2003) J. Phys. Chem. B , vol.107 , pp. 1345-1352
    • Werder, T.1    Walther, J.H.2    Jaffe, R.L.3    Halicioglu, T.4    Koumoutsakos, P.5
  • 45
    • 50449086748 scopus 로고    scopus 로고
    • Structure of water adsorbed on a single graphene sheet
    • 2008PhRvB.78g5432G 10.1103/PhysRevB.78.075432
    • MC Gordillo J Marti 2008 Structure of water adsorbed on a single graphene sheet Phys. Rev. B 78 75432 2008PhRvB..78g5432G 10.1103/PhysRevB.78.075432
    • (2008) Phys. Rev. B , vol.78 , pp. 75432
    • Gordillo, M.C.1    Marti, J.2
  • 47
    • 0242352685 scopus 로고    scopus 로고
    • Possible mechanism for cold denaturation of proteins at high pressure
    • 2003PhRvL.91m8103M 10.1103/PhysRevLett.91.138103
    • MI Marqués JM Borreguero HE Stanley NV Dokholyan 2003 Possible mechanism for cold denaturation of proteins at high pressure Phys. Rev. Lett 91 138103 2003PhRvL..91m8103M 10.1103/PhysRevLett.91.138103
    • (2003) Phys. Rev. Lett , vol.91 , pp. 138103
    • Marqués, M.I.1    Borreguero, J.M.2    Stanley, H.E.3    Dokholyan, N.V.4
  • 49
    • 0029040518 scopus 로고
    • NMR study of the cold, heat, and pressure unfolding of ribonuclease A
    • 10.1021/bi00027a012
    • J Zhang X Peng A Jonas J Jonas 1995 NMR study of the cold, heat, and pressure unfolding of ribonuclease A Biochemistry 34 8631 8641 10.1021/bi00027a012
    • (1995) Biochemistry , vol.34 , pp. 8631-8641
    • Zhang, J.1    Peng, X.2    Jonas, A.3    Jonas, J.4
  • 50
    • 37349103161 scopus 로고    scopus 로고
    • A water-explicit lattice model of heat-, cold-, and pressure-induced protein unfolding
    • DOI 10.1529/biophysj.107.108530
    • BA Patel PG Debenedetti FH Stillinger PJ Rossky 2007 A water-explicit lattice model of heat-, cold-, and pressure-induced protein unfolding Biophys. J. 93 4116 4127 2007BpJ....93.4116P 10.1529/biophysj.107.108530 (Pubitemid 350294461)
    • (2007) Biophysical Journal , vol.93 , Issue.12 , pp. 4116-4127
    • Patel, B.A.1    Debenedetti, P.G.2    Stillinger, F.H.3    Rossky, P.J.4
  • 51
    • 79955479133 scopus 로고    scopus 로고
    • Water at the interface with proteins
    • 10.1007/s11483-010-9198-4
    • G Franzese V Bianco S Iskrov 2011 Water at the interface with proteins Food Biophys. 6 186 198 10.1007/s11483-010-9198-4
    • (2011) Food Biophys. , vol.6 , pp. 186-198
    • Franzese, G.1    Bianco, V.2    Iskrov, S.3
  • 52
    • 0000170769 scopus 로고    scopus 로고
    • Structures of high-density and low-density water
    • DOI 10.1103/PhysRevLett.84.2881, 2881
    • A Soper M Ricci 2000 Structures of high-density and low-density water Phys. Rev. Lett. 84 2881 2884 2000PhRvL..84.2881S 10.1103/PhysRevLett.84.2881 (Pubitemid 40598922)
    • (2000) Physical Review Letters , vol.84 , Issue.13 , pp. 2881-2884
    • Soper, A.K.1    Ricci, M.A.2
  • 54
    • 0036943556 scopus 로고    scopus 로고
    • A theory for discriminating the mechanism responsible for the water density anomaly
    • 2002PhyA.314.508F 10.1016/S0378-4371(02)01186-X
    • G Franzese HE Stanley 2002 A theory for discriminating the mechanism responsible for the water density anomaly Physica A 314 508 513 2002PhyA..314..508F 10.1016/S0378-4371(02)01186-X
    • (2002) Physica A , vol.314 , pp. 508-513
    • Franzese, G.1    Stanley, H.E.2
  • 55
    • 0037061171 scopus 로고    scopus 로고
    • Liquid-liquid critical point in a Hamiltonian model for water: Analytic solution
    • DOI 10.1088/0953-8984/14/9/309, PII S0953898402312578
    • G Franzese HE Stanley 2002 Liquid-liquid critical point in a Hamiltonian model for water: analytic solution J. Phys. Condens. Matter. 14 2201 2209 2002JPCM...14.2201F 10.1088/0953-8984/14/9/309 (Pubitemid 34255451)
    • (2002) Journal of Physics Condensed Matter , vol.14 , Issue.9 , pp. 2201-2209
    • Franzese, G.1    Stanley, H.E.2
  • 56
    • 0037717183 scopus 로고    scopus 로고
    • Intramolecular coupling as a mechanism for a liquid-liquid phase transition
    • 2003PhRvE.67a1103F 10.1103/PhysRevE.67.011103
    • G Franzese MI Marqués HE Stanley 2003 Intramolecular coupling as a mechanism for a liquid-liquid phase transition Phys. Rev. E 67 11103 2003PhRvE..67a1103F 10.1103/PhysRevE.67.011103
    • (2003) Phys. Rev. e , vol.67 , pp. 11103
    • Franzese, G.1    Marqués, M.I.2    Stanley, H.E.3
  • 57
    • 34247515172 scopus 로고    scopus 로고
    • The Widom line of supercooled water
    • DOI 10.1088/0953-8984/19/20/205126, PII S0953898407416514
    • G Franzese HE Stanley 2007 The Widom line of supercooled water J. Phys. Condens. Matter 19 205126 2007JPCM...19t5126F 10.1088/0953-8984/19/20/205126 (Pubitemid 46653758)
    • (2007) Journal of Physics Condensed Matter , vol.19 , Issue.20 , pp. 205126
    • Franzese, G.1    Stanley, H.E.2
  • 59
    • 57449098634 scopus 로고    scopus 로고
    • Similarities between confined and supercooled water
    • 2009FaDi.141.347R 10.1039/b805706k
    • MA Ricci F Bruni A Giuliani 2009 Similarities between confined and supercooled water Faraday Discuss. 141 347 358 2009FaDi..141..347R 10.1039/b805706k
    • (2009) Faraday Discuss. , vol.141 , pp. 347-358
    • Ricci, M.A.1    Bruni, F.2    Giuliani, A.3
  • 60
    • 71949109896 scopus 로고    scopus 로고
    • Dynamically slow processes in supercooled water confined between hydrophobic plates
    • 10.1088/0953-8984/21/50/504107
    • G Franzese F de los Santos 2009 Dynamically slow processes in supercooled water confined between hydrophobic plates J. Phys. Condens. Matter 21 504107 10.1088/0953-8984/21/50/504107
    • (2009) J. Phys. Condens. Matter , vol.21 , pp. 504107
    • Franzese, G.1    De Los Santos, F.2
  • 61
    • 61649089012 scopus 로고    scopus 로고
    • Cluster Monte Carlo and numerical mean field analysis for the water liquid-liquid phase transition
    • 2009CoPhC.180.497M 10.1016/j.cpc.2009.01.018
    • MG Mazza K Stokely EG Strekalova HE Stanley G Franzese 2009 Cluster Monte Carlo and numerical mean field analysis for the water liquid-liquid phase transition Comput. Phys. Commun. 180 497 592 2009CoPhC.180..497M 10.1016/j.cpc.2009.01.018
    • (2009) Comput. Phys. Commun. , vol.180 , pp. 497-592
    • Mazza, M.G.1    Stokely, K.2    Strekalova, E.G.3    Stanley, H.E.4    Franzese, G.5
  • 62
    • 76549109227 scopus 로고    scopus 로고
    • Effect of hydrogen bond cooperativity on the behavior of water
    • 2010PNAS.107.1301S 10.1073/pnas.0912756107
    • K Stokely MG Mazza HE Stanley G Franzese 2010 Effect of hydrogen bond cooperativity on the behavior of water Proc. Natl. Acad. Sci. USA 107 1301 1306 2010PNAS..107.1301S 10.1073/pnas.0912756107
    • (2010) Proc. Natl. Acad. Sci. USA , vol.107 , pp. 1301-1306
    • Stokely, K.1    Mazza, M.G.2    Stanley, H.E.3    Franzese, G.4
  • 63
    • 44649157751 scopus 로고    scopus 로고
    • Dynamics and thermodynamics of water
    • DOI 10.1088/0953-8984/20/24/244114, PII S0953898408749294
    • P Kumar G Franzese HE Stanley 2008 Dynamics and thermodynamics of water J. Phys. Condens. Matter 20 244114 2008JPCM...20x4114K 10.1088/0953-8984/20/24/ 244114 (Pubitemid 351777660)
    • (2008) Journal of Physics Condensed Matter , vol.20 , Issue.24 , pp. 244114
    • Kumar, P.1    Franzese, G.2    Eugene Stanley, H.3
  • 64
    • 40849124216 scopus 로고    scopus 로고
    • Predictions of dynamic behavior under pressure for two scenarios to explain water anomalies
    • DOI 10.1103/PhysRevLett.100.105701
    • P Kumar G Franzese HE Stanley 2008 Predictions of dynamic behavior under pressure for two scenarios to explain water anomalies Phys. Rev. Lett. 100 105701 2008PhRvL.100j5701K 10.1103/PhysRevLett.100.105701 (Pubitemid 351399095)
    • (2008) Physical Review Letters , vol.100 , Issue.10 , pp. 105701
    • Kumar, P.1    Franzese, G.2    Stanley, H.E.3
  • 66
    • 79960623607 scopus 로고    scopus 로고
    • Large decrease of fluctuations for supercooled water in hydrophobic nanoconfinement
    • 2011PhRvL.106n5701S 10.1103/PhysRevLett.106.145701
    • EG Strekalova MG Mazza HE Stanley G Franzese 2011 Large decrease of fluctuations for supercooled water in hydrophobic nanoconfinement Phys. Rev. Lett. 106 145701 2011PhRvL.106n5701S 10.1103/PhysRevLett.106.145701
    • (2011) Phys. Rev. Lett. , vol.106 , pp. 145701
    • Strekalova, E.G.1    Mazza, M.G.2    Stanley, H.E.3    Franzese, G.4
  • 67
    • 82555186113 scopus 로고    scopus 로고
    • Understanding diffusion and density anomaly in a coarse-grained model for water confined between hydrophobic
    • de los Santos, F., Franzese, G.: Understanding diffusion and density anomaly in a coarse-grained model for water confined between hydrophobic. J. Phys. Chem. B 115, (2011)
    • (2011) J. Phys. Chem. B , vol.115
    • De Los Santos, F.1    Franzese, G.2
  • 69
    • 58149348587 scopus 로고    scopus 로고
    • Pressure effects in supercooled water: Comparison between a 2D model of water and experiments for surface water on a protein
    • 10.1088/0953-8984/20/49/494210
    • G Franzese K Stokely X-Q Chu P Kumar MG Mazza S-H Chen HE Stanley 2008 Pressure effects in supercooled water: comparison between a 2D model of water and experiments for surface water on a protein J. Phys. Condens. Matter 20 494210 10.1088/0953-8984/20/49/494210
    • (2008) J. Phys. Condens. Matter , vol.20 , pp. 494210
    • Franzese, G.1    Stokely, K.2    Chu, X.-Q.3    Kumar, P.4    Mazza, M.G.5    Chen, S.-H.6    Stanley, H.E.7
  • 70
    • 0345498055 scopus 로고    scopus 로고
    • Anomalous diffusion of adsorbed water: A neutron scattering study of hydrated myoglobin
    • M Settles W Doster 1996 Anomalous diffusion of adsorbed water: A neutron scattering study of hydrated myoglobin Faraday Discuss. 103 269 279 1996FaDi..103..269S 10.1039/fd9960300269 (Pubitemid 126459160)
    • (1996) Faraday Discussions , vol.103 , pp. 269-279
    • Settles, M.1    Doster, W.2
  • 71
    • 71649083072 scopus 로고    scopus 로고
    • The protein-solvent glass transition
    • W Doster 2010 The protein-solvent glass transition Biochim. Biophys. Acta 1804 3 14
    • (2010) Biochim. Biophys. Acta , vol.1804 , pp. 3-14
    • Doster, W.1
  • 72
    • 0001504045 scopus 로고
    • Limiting forms of the thermodynamic divergences at the conjectured stability limits in superheated and supercooled water
    • 10.1021/j100212a038
    • RJ Speedy 1982 Limiting forms of the thermodynamic divergences at the conjectured stability limits in superheated and supercooled water J. Phys. Chem. 86 3002 3005 10.1021/j100212a038
    • (1982) J. Phys. Chem. , vol.86 , pp. 3002-3005
    • Speedy, R.J.1
  • 73
    • 0344897154 scopus 로고    scopus 로고
    • Supercooled and glassy water
    • 2003JPCM.15.1669D 10.1088/0953-8984/15/45/R01
    • PG Debenedetti 2003 Supercooled and glassy water J. Phys. Condens. Matter 15 1669 1726 2003JPCM...15.1669D 10.1088/0953-8984/15/45/R01
    • (2003) J. Phys. Condens. Matter , vol.15 , pp. 1669-1726
    • Debenedetti, P.G.1
  • 74
    • 0000256814 scopus 로고
    • Phase-behavior of metastable water
    • 1992Natur.360.324P 10.1038/360324a0
    • P Poole F Sciortino U Essmann HE Stanley 1992 Phase-behavior of metastable water Nature 360 324 328 1992Natur.360..324P 10.1038/360324a0
    • (1992) Nature , vol.360 , pp. 324-328
    • Poole, P.1    Sciortino, F.2    Essmann, U.3    Stanley, H.E.4
  • 76
    • 0000835084 scopus 로고    scopus 로고
    • A self-consistent phase diagram for supercooled water
    • H Tanaka 1996 A self-consistent phase diagram for supercooled water Nature 380 328 330 1996Natur.380..328T 10.1038/380328a0 (Pubitemid 126570265)
    • (1996) Nature , vol.380 , Issue.6572 , pp. 328-330
    • Tanaka, H.1
  • 77
    • 18144365354 scopus 로고    scopus 로고
    • Phase behaviors of supercooled water: Reconciling a critical point of amorphous ices with spinodal instability
    • H Tanaka 1996 Phase behaviors of supercooled water: reconciling a critical point of amorphous ices with spinodal instability J. Chem. Phys. 105 5099 5111 1996JChPh.105.5099T 10.1063/1.472354 (Pubitemid 126748094)
    • (1996) Journal of Chemical Physics , vol.105 , Issue.12 , pp. 5099-5111
    • Tanaka, H.1
  • 78
    • 58049152305 scopus 로고    scopus 로고
    • Thermodynamic and structural characterization of the transformation from a metastable low-density to a very high-density form of supercooled TIP4P-Ew model water
    • 10.1002/cphc.200800539
    • D Paschek A Rüppert A Geiger 2008 Thermodynamic and structural characterization of the transformation from a metastable low-density to a very high-density form of supercooled TIP4P-Ew model water ChemPhysChem 9 2737 2741 10.1002/cphc.200800539
    • (2008) ChemPhysChem , vol.9 , pp. 2737-2741
    • Paschek, D.1    Rüppert, A.2    Geiger, A.3
  • 79
    • 70349290804 scopus 로고    scopus 로고
    • Low-temperature fluid-phase behavior of ST2 water
    • 2009JChPh.131j4508L 10.1063/1.3229892
    • Y Liu AZ Panagiotopoulos PG Debenedetti 2009 Low-temperature fluid-phase behavior of ST2 water J. Chem. Phys. 131 104508 2009JChPh.131j4508L 10.1063/1.3229892
    • (2009) J. Chem. Phys. , vol.131 , pp. 104508
    • Liu, Y.1    Panagiotopoulos, A.Z.2    Debenedetti, P.G.3
  • 80
    • 78650713175 scopus 로고    scopus 로고
    • Widom line and the liquid-liquid critical point for the TIP4P/2005 water model
    • 2010JChPh.133w4502A 10.1063/1.3506860
    • JLF Abascal C Vega 2010 Widom line and the liquid-liquid critical point for the TIP4P/2005 water model J. Chem. Phys. 133 234502 2010JChPh.133w4502A 10.1063/1.3506860
    • (2010) J. Chem. Phys. , vol.133 , pp. 234502
    • Abascal, J.L.F.1    Vega, C.2
  • 81
    • 38849174857 scopus 로고    scopus 로고
    • Insights into phases of liquid water from study of its unusual glass-forming properties
    • DOI 10.1126/science.1131939
    • CA Angell 2008 Insights into phases of liquid water from study of its unusual glass-forming properties Science 319 582 587 10.1126/science.1131939 (Pubitemid 351197054)
    • (2008) Science , vol.319 , Issue.5863 , pp. 582-587
    • Angell, C.A.1
  • 85
    • 36149042365 scopus 로고
    • Cluster and Ising critical droplets: A renormalization group approach
    • 1980JPhA.13.2775C 10.1088/0305-4470/13/8/025
    • A Coniglio W Klein 1980 Cluster and Ising critical droplets: a renormalization group approach J. Phys. A 12 2775 2780 1980JPhA...13.2775C 10.1088/0305-4470/13/8/025
    • (1980) J. Phys. A , vol.12 , pp. 2775-2780
    • Coniglio, A.1    Klein, W.2
  • 86
    • 0041855748 scopus 로고
    • On the random cluster model. I. Introduction and relation to other models
    • 359655 1972Phy.57.536F 10.1016/0031-8914(72)90045-6
    • CM Fortuin PW Kasteleyn 1972 On the random cluster model. I. Introduction and relation to other models Physica (Amsterdam) 57 536 564 359655 1972Phy....57..536F 10.1016/0031-8914(72)90045-6
    • (1972) Physica (Amsterdam) , vol.57 , pp. 536-564
    • Fortuin, C.M.1    Kasteleyn, P.W.2
  • 87
    • 33747349191 scopus 로고
    • Nonuniversal critical dynamics in Monte Carlo simulations
    • 1987PhRvL.58.86S 10.1103/PhysRevLett.58.86
    • RH Swendsen JS Wang 1987 Nonuniversal critical dynamics in Monte Carlo simulations Phys. Rev. Lett. 58 86 88 1987PhRvL..58...86S 10.1103/PhysRevLett. 58.86
    • (1987) Phys. Rev. Lett. , vol.58 , pp. 86-88
    • Swendsen, R.H.1    Wang, J.S.2
  • 88
    • 5244336186 scopus 로고
    • Collective Monte Carlo updating for spin systems
    • 1989PhRvL.62.361W 10.1103/PhysRevLett.62.361
    • U Wolff 1989 Collective Monte Carlo updating for spin systems Phys. Rev. Lett. 62 361 364 1989PhRvL..62..361W 10.1103/PhysRevLett.62.361
    • (1989) Phys. Rev. Lett. , vol.62 , pp. 361-364
    • Wolff, U.1
  • 89
    • 0001256086 scopus 로고
    • Exact relations between droplets and thermal fluctuations in external field
    • 1989JPhA.22L.837C 10.1088/0305-4470/22/17/006
    • A Coniglio FD Liberto G Monroy F Peruggi 1989 Exact relations between droplets and thermal fluctuations in external field J. Phys. A 22 837 842 1989JPhA...22L.837C 10.1088/0305-4470/22/17/006
    • (1989) J. Phys. A , vol.22 , pp. 837-842
    • Coniglio, A.1    Liberto, F.D.2    Monroy, G.3    Peruggi, F.4
  • 90
    • 0040798691 scopus 로고
    • Critical clusters and efficient dynamics for frustrated spin models
    • V Cataudella G Franzese M Nicodemi A Scala A Coniglio 1994 Critical clusters and efficient dynamics for frustrated spin models Phys. Rev. Lett. 72 1541 1544 1994PhRvL..72.1541C 10.1103/PhysRevLett.72.1541 (Pubitemid 24974973)
    • (1994) Physical Review Letters , vol.72 , Issue.10 , pp. 1541-1544
    • Cataudella, V.1    Franzese, G.2    Nicodemi, M.3    Scala, A.4    Coniglio, A.5
  • 91
    • 0030574417 scopus 로고    scopus 로고
    • Cluster analysis for percolation on a two-dimensional fully frustrated system
    • 1406908 1996JPhA.29.7367F 0904.60081 10.1088/0305-4470/29/23/007
    • G Franzese 1996 Cluster analysis for percolation on a two-dimensional fully frustrated system J. Phys. A 29 7367 7375 1406908 1996JPhA...29.7367F 0904.60081 10.1088/0305-4470/29/23/007
    • (1996) J. Phys. A , vol.29 , pp. 7367-7375
    • Franzese, G.1
  • 95
    • 0034206061 scopus 로고    scopus 로고
    • Potts fully frustrated model: Thermodynamics, percolation, and dynamics in two dimensions
    • 2000PhRvE.61.6383F 10.1103/PhysRevE.61.6383
    • G Franzese 2000 Potts fully frustrated model: thermodynamics, percolation, and dynamics in two dimensions Phys. Rev. E 61 6383 6391 2000PhRvE..61.6383F 10.1103/PhysRevE.61.6383
    • (2000) Phys. Rev. e , vol.61 , pp. 6383-6391
    • Franzese, G.1
  • 97
    • 51149099990 scopus 로고    scopus 로고
    • Percolation and three-dimensional structure of supercritical water
    • 2008PhRvE.78b1505B 10.1103/PhysRevE.78.021505
    • M Bernabei A Botti MA Ricci AK Soper 2008 Percolation and three-dimensional structure of supercritical water Phys. Rev. E 78 21505 2008PhRvE..78b1505B 10.1103/PhysRevE.78.021505
    • (2008) Phys. Rev. e , vol.78 , pp. 21505
    • Bernabei, M.1    Botti, A.2    Ricci, M.A.3    Soper, A.K.4
  • 98
    • 33244471517 scopus 로고    scopus 로고
    • Percolation transition of hydration water: From planar hydrophilic surfaces to proteins
    • DOI 10.1103/PhysRevLett.95.247802
    • A Oleinikova I Brovchenko N Smolin A Krukau A Geiger R Winter 2005 Percolation transition of hydration water: from planar hydrophilic surfaces to proteins Phys. Rev. Lett. 95 247802 2005PhRvL..95x7802O 10.1103/PhysRevLett.95. 247802 (Pubitemid 43272911)
    • (2005) Physical Review Letters , vol.95 , Issue.24 , pp. 247802
    • Oleinikova, A.1    Brovchenko, I.2    Smolin, N.3    Krukau, A.4    Geiger, A.5    Winter, R.6
  • 99
    • 0030806177 scopus 로고    scopus 로고
    • Enhancement of protein crystal nucleation by critical density fluctuations
    • DOI 10.1126/science.277.5334.1975
    • PR tenWolde D Frenkel 1997 Enhancement of protein crystal nucleation by critical density fluctuations Science 277 1975 1978 10.1126/science.277.5334. 1975 (Pubitemid 27449135)
    • (1997) Science , vol.277 , Issue.5334 , pp. 1975-1978
    • Ten Wolde, P.R.1    Frenkel, D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.