-
3
-
-
0041462889
-
Proteomic analysis of the escherichia coli outer membrane
-
Molloy MP, Herbert BR, Slade MB, Rabilloud T, Nouwens AS, et al. (2000) Proteomic analysis of the escherichia coli outer membrane. European Journal of Biochemistry/FEBS 267: 2871-2881.
-
(2000)
European Journal of Biochemistry/FEBS
, vol.267
, pp. 2871-2881
-
-
Molloy, M.P.1
Herbert, B.R.2
Slade, M.B.3
Rabilloud, T.4
Nouwens, A.S.5
-
4
-
-
0028341536
-
Permeation of hydrophilic solutes through mitochondrial outer membranes: review on mitochondrial porins
-
Benz R, (1994) Permeation of hydrophilic solutes through mitochondrial outer membranes: review on mitochondrial porins. Biochimica Et Biophysica Acta 1197: 167-196.
-
(1994)
Biochimica Et Biophysica Acta
, vol.1197
, pp. 167-196
-
-
Benz, R.1
-
5
-
-
0028090537
-
Porins from plants. molecular cloning and functional characterization of two new members of the porin family
-
Fischer K, Weber A, Brink S, Arbinger B, Schnemann D, et al. (1994) Porins from plants. molecular cloning and functional characterization of two new members of the porin family. The Journal of Biological Chemistry 269: 25754-25760.
-
(1994)
The Journal of Biological Chemistry
, vol.269
, pp. 25754-25760
-
-
Fischer, K.1
Weber, A.2
Brink, S.3
Arbinger, B.4
Schnemann, D.5
-
6
-
-
50249128194
-
Structural biology of membrane-intrinsic beta-barrel enzymes: sentinels of the bacterial outer membrane
-
Bishop RE, (2008) Structural biology of membrane-intrinsic beta-barrel enzymes: sentinels of the bacterial outer membrane. Biochim Biophys Acta 1778: 1881-96.
-
(2008)
Biochim Biophys Acta
, vol.1778
, pp. 1881-1896
-
-
Bishop, R.E.1
-
7
-
-
23844558266
-
A mitochondrial paradigm of metabolic and degenerative diseases, aging, and cancer: a dawn for evolutionary medicine
-
Wallace DC, (2005) A mitochondrial paradigm of metabolic and degenerative diseases, aging, and cancer: a dawn for evolutionary medicine. Annual Review of Genetics 39: 359-407.
-
(2005)
Annual Review of Genetics
, vol.39
, pp. 359-407
-
-
Wallace, D.C.1
-
8
-
-
52449132327
-
Mitochondrial voltage-dependent anion channels (VDACs) as novel pharmacological targets for anti-cancer agents
-
Simamura E, Shimada H, Hatta T, Hirai K, (2008) Mitochondrial voltage-dependent anion channels (VDACs) as novel pharmacological targets for anti-cancer agents. Journal of Bioenergetics and Biomembranes 40: 213-217.
-
(2008)
Journal of Bioenergetics and Biomembranes
, vol.40
, pp. 213-217
-
-
Simamura, E.1
Shimada, H.2
Hatta, T.3
Hirai, K.4
-
9
-
-
0035925682
-
Safety and immunogenicity of an intranasal pseudomonas aeruginosa hybrid outer membrane protein F-I vaccine in human volunteers
-
Larbig M, Mansouri E, Freihorst J, Tmmler B, Khler G, et al. (2001) Safety and immunogenicity of an intranasal pseudomonas aeruginosa hybrid outer membrane protein F-I vaccine in human volunteers. Vaccine 19: 2291-2297.
-
(2001)
Vaccine
, vol.19
, pp. 2291-2297
-
-
Larbig, M.1
Mansouri, E.2
Freihorst, J.3
Tmmler, B.4
Khler, G.5
-
10
-
-
77949316673
-
Nanoporous membranes for medical and biological applications
-
Adiga SP, Jin C, Curtiss LA, Monteiro-Riviere NA, Narayan RJ, (2009) Nanoporous membranes for medical and biological applications. Wiley Interdisciplinary Reviews Nanomedicine and Nanobiotechnology 1: 568-581.
-
(2009)
Wiley Interdisciplinary Reviews Nanomedicine and Nanobiotechnology
, vol.1
, pp. 568-581
-
-
Adiga, S.P.1
Jin, C.2
Curtiss, L.A.3
Monteiro-Riviere, N.A.4
Narayan, R.J.5
-
11
-
-
77149159117
-
Peptidomimetic antibiotics target outer-membrane biogenesis in pseudomonas aeruginosa
-
Srinivas N, Jetter P, Ueberbacher BJ, Werneburg M, Zerbe K, et al. (2010) Peptidomimetic antibiotics target outer-membrane biogenesis in pseudomonas aeruginosa. Science 327: 1010-1013.
-
(2010)
Science
, vol.327
, pp. 1010-1013
-
-
Srinivas, N.1
Jetter, P.2
Ueberbacher, B.J.3
Werneburg, M.4
Zerbe, K.5
-
12
-
-
0030841732
-
Function and modulation of bacterial porins: insights from electrophysiology
-
Delcour AH, (1997) Function and modulation of bacterial porins: insights from electrophysiology. FEMS Microbiology Letters 151: 115-123.
-
(1997)
FEMS Microbiology Letters
, vol.151
, pp. 115-123
-
-
Delcour, A.H.1
-
13
-
-
64649088018
-
Outer membrane permeability and antibiotic resistance
-
Delcour AH, (2009) Outer membrane permeability and antibiotic resistance. Biochimica Et Biophysica Acta 1794: 808-816.
-
(2009)
Biochimica Et Biophysica Acta
, vol.1794
, pp. 808-816
-
-
Delcour, A.H.1
-
14
-
-
0035795721
-
Amino acid distributions in integral membrane protein structures
-
Ulmschneider MB, Sansom MS, (2001) Amino acid distributions in integral membrane protein structures. Biochimica Et Biophysica Acta 1512: 1-14.
-
(2001)
Biochimica Et Biophysica Acta
, vol.1512
, pp. 1-14
-
-
Ulmschneider, M.B.1
Sansom, M.S.2
-
15
-
-
0036147641
-
Toward genomic identification of beta-barrel membrane proteins: composition and architecture of known structures
-
Wimley WC, (2002) Toward genomic identification of beta-barrel membrane proteins: composition and architecture of known structures. Protein Sci 11: 301-12.
-
(2002)
Protein Sci
, vol.11
, pp. 301-312
-
-
Wimley, W.C.1
-
16
-
-
56649099192
-
The crystal structure of mouse VDAC1 at 2.3 a resolution reveals mechanistic insights into metabolite gating
-
Ujwal R, Cascio D, Colletier J, Faham S, Zhang J, et al. (2008) The crystal structure of mouse VDAC1 at 2.3 a resolution reveals mechanistic insights into metabolite gating. Proc Natl Acad Sci U S A 105: 17742-17747.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 17742-17747
-
-
Ujwal, R.1
Cascio, D.2
Colletier, J.3
Faham, S.4
Zhang, J.5
-
17
-
-
62449204669
-
Online tools for predicting integral membrane proteins
-
Bigelow H, Rost B, (2009) Online tools for predicting integral membrane proteins. Methods Mol Biol 528: 3-23.
-
(2009)
Methods Mol Biol
, vol.528
, pp. 3-23
-
-
Bigelow, H.1
Rost, B.2
-
18
-
-
39149140433
-
TMBpro: secondary structure, beta-contact and tertiary structure prediction of transmembrane beta-barrel proteins
-
Randall A, Cheng J, Sweredoski M, Baldi P, (2008) TMBpro: secondary structure, beta-contact and tertiary structure prediction of transmembrane beta-barrel proteins. Bioinformatics 24: 513-520.
-
(2008)
Bioinformatics
, vol.24
, pp. 513-520
-
-
Randall, A.1
Cheng, J.2
Sweredoski, M.3
Baldi, P.4
-
19
-
-
67849103758
-
HHomp-prediction and classification of outer membrane proteins
-
Remmert M, Linke D, Lupas AN, Soding J, (2009) HHomp-prediction and classification of outer membrane proteins. Nucleic Acids Res 37(Web Server issue): W446-51.
-
(2009)
Nucleic Acids Res
, vol.37
, Issue.Web Server issue
, pp. 446-451
-
-
Remmert, M.1
Linke, D.2
Lupas, A.N.3
Soding, J.4
-
20
-
-
13244259253
-
Evaluation of methods for predicting the topology of beta-barrel outer membrane proteins and a consensus prediction method
-
Bagos PG, Liakopoulos TD, Hamodrakas SJ, (2005) Evaluation of methods for predicting the topology of beta-barrel outer membrane proteins and a consensus prediction method. BMC Bioinformatics 6: 7.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 7
-
-
Bagos, P.G.1
Liakopoulos, T.D.2
Hamodrakas, S.J.3
-
21
-
-
33749140136
-
Sequence motifs and antimotifs in beta-barrel membrane proteins from a genome-wide analysis: the Ala-Tyr dichotomy and chaperone binding motifs
-
Jackups R, Cheng S, Liang J, (2006) Sequence motifs and antimotifs in beta-barrel membrane proteins from a genome-wide analysis: the Ala-Tyr dichotomy and chaperone binding motifs. J Mol Biol 363: 611-23.
-
(2006)
J Mol Biol
, vol.363
, pp. 611-623
-
-
Jackups, R.1
Cheng, S.2
Liang, J.3
-
22
-
-
0035876470
-
Folding of beta-sheets in membranes: specificity and promiscuity in peptide model systems
-
Bishop CM, Walkenhorst WF, Wimley WC, (2001) Folding of beta-sheets in membranes: specificity and promiscuity in peptide model systems. Journal of Molecular Biology 309: 975-988.
-
(2001)
Journal of Molecular Biology
, vol.309
, pp. 975-988
-
-
Bishop, C.M.1
Walkenhorst, W.F.2
Wimley, W.C.3
-
23
-
-
28444482763
-
Interstrand pairing patterns in beta-barrel membrane proteins: the positive-outside rule, aromatic rescue, and strand registration prediction
-
Jackups R, Liang J, (2005) Interstrand pairing patterns in beta-barrel membrane proteins: the positive-outside rule, aromatic rescue, and strand registration prediction. Journal of Molecular Biology 354: 979-993.
-
(2005)
Journal of Molecular Biology
, vol.354
, pp. 979-993
-
-
Jackups, R.1
Liang, J.2
-
24
-
-
69149083388
-
Predicting weakly stable regions, oligomerization state, and protein-protein interfaces in transmembrane domains of outer membrane proteins
-
Naveed H, Jackups R, Liang J, (2009) Predicting weakly stable regions, oligomerization state, and protein-protein interfaces in transmembrane domains of outer membrane proteins. Proc Natl Acad Sci U S A 106: 12735-12740.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 12735-12740
-
-
Naveed, H.1
Jackups, R.2
Liang, J.3
-
25
-
-
0027062943
-
Environmentspecific amino acid substitution tables: tertiary templates and prediction of protein folds
-
Overington J, Donnelly D, Johnson MS, Sali A, Blundell TL, (1992) Environmentspecific amino acid substitution tables: tertiary templates and prediction of protein folds. Protein Science 1: 216-226.
-
(1992)
Protein Science
, vol.1
, pp. 216-226
-
-
Overington, J.1
Donnelly, D.2
Johnson, M.S.3
Sali, A.4
Blundell, T.L.5
-
26
-
-
0025104478
-
Tertiary structural constraints on protein evolutionary diversity: templates, key residues and structure prediction
-
Overington J, Johnson MS, Sali A, Blundell TL, (1990) Tertiary structural constraints on protein evolutionary diversity: templates, key residues and structure prediction. Proceedings Biological Sciences/The Royal Society 241: 132-145.
-
(1990)
Proceedings Biological Sciences/The Royal Society
, vol.241
, pp. 132-145
-
-
Overington, J.1
Johnson, M.S.2
Sali, A.3
Blundell, T.L.4
-
28
-
-
0026458378
-
Amino acid substitution matrices from protein blocks
-
Henikoff S, Henikoff JG, (1992) Amino acid substitution matrices from protein blocks. Proc Natl Acad Sci U S A 89: 10915-9.
-
(1992)
Proc Natl Acad Sci U S A
, vol.89
, pp. 10915-10919
-
-
Henikoff, S.1
Henikoff, J.G.2
-
29
-
-
0346734129
-
The compositional adjustment of amino acid substitution matrices
-
Yu YK, Wootton JC, Altschul SF, (2003) The compositional adjustment of amino acid substitution matrices. Proc Natl Acad Sci U S A 100: 15688-93.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 15688-15693
-
-
Yu, Y.K.1
Wootton, J.C.2
Altschul, S.F.3
-
30
-
-
0033670313
-
PHAT: a transmembrane-specific substitution matrix. predicted hydrophobic and transmembrane
-
Ng PC, Henikoff JG, Henikoff S, (2000) PHAT: a transmembrane-specific substitution matrix. predicted hydrophobic and transmembrane. Bioinformatics 16: 760-6.
-
(2000)
Bioinformatics
, vol.16
, pp. 760-766
-
-
Ng, P.C.1
Henikoff, J.G.2
Henikoff, S.3
-
31
-
-
0035230037
-
Non-symmetric score matrices and the detection of homologous transmembrane proteins
-
Muller T, Rahmann S, Rehmsmeier M, (2001) Non-symmetric score matrices and the detection of homologous transmembrane proteins. Bioinformatics 17 (Suppl 1): S182-9.
-
(2001)
Bioinformatics
, vol.17
, Issue.SUPPL. 1
, pp. 182-189
-
-
Muller, T.1
Rahmann, S.2
Rehmsmeier, M.3
-
32
-
-
30744465573
-
Estimation of amino acid residue substitution rates at local spatial regions and application in protein function inference: a bayesian monte carlo approach
-
Tseng YY, Liang J, (2006) Estimation of amino acid residue substitution rates at local spatial regions and application in protein function inference: a bayesian monte carlo approach. Mol Biol Evol 23: 421-36.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 421-436
-
-
Tseng, Y.Y.1
Liang, J.2
-
34
-
-
0027640084
-
Bacterial porins: structure and function
-
Schulz GE, (1993) Bacterial porins: structure and function. Current Opinion in Cell Biology 5: 701-707.
-
(1993)
Current Opinion in Cell Biology
, vol.5
, pp. 701-707
-
-
Schulz, G.E.1
-
35
-
-
3042678854
-
Predicting transmembrane beta-barrels in proteomes
-
Bigelow HR, Petrey DS, Liu J, Przybylski D, Rost B, (2004) Predicting transmembrane beta-barrels in proteomes. Nucleic Acids Res 32: 2566-77.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 2566-2577
-
-
Bigelow, H.R.1
Petrey, D.S.2
Liu, J.3
Przybylski, D.4
Rost, B.5
-
36
-
-
0031841788
-
The PIRInternational protein sequence database
-
Barker WC, Garavelli JS, Haft DH, Hunt LT, Marzec CR, et al. (1998) The PIRInternational protein sequence database. Nucleic Acids Res 26: 27-32.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 27-32
-
-
Barker, W.C.1
Garavelli, J.S.2
Haft, D.H.3
Hunt, L.T.4
Marzec, C.R.5
-
37
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ, (1990) Basic local alignment search tool. J Mol Biol 215: 403-10.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
38
-
-
0030447720
-
Structure of staphylococcal alpha-hemolysin, a heptameric transmembrane pore
-
Song L, Hobaugh MR, Shustak C, Cheley S, Bayley H, Gouaux JE, (1996) Structure of staphylococcal alpha-hemolysin, a heptameric transmembrane pore. Science 274: 1859-1866.
-
(1996)
Science
, vol.274
, pp. 1859-1866
-
-
Song, L.1
Hobaugh, M.R.2
Shustak, C.3
Cheley, S.4
Bayley, H.5
Gouaux, J.E.6
-
39
-
-
68949207040
-
Biogenesis of beta-barrel membrane proteins in bacteria and eukaryotes: evolutionary conservation and divergence
-
Walther DM, Rapaport D, Tommassen J, (2009) Biogenesis of beta-barrel membrane proteins in bacteria and eukaryotes: evolutionary conservation and divergence. Cellular and Molecular Life Sciences: CMLS 66: 2789-2804.
-
(2009)
Cellular and Molecular Life Sciences: CMLS
, vol.66
, pp. 2789-2804
-
-
Walther, D.M.1
Rapaport, D.2
Tommassen, J.3
-
40
-
-
77953811604
-
Structure and evolution of mitochondrial outer membrane proteins of beta-barrel topology
-
Zeth K, (2010) Structure and evolution of mitochondrial outer membrane proteins of beta-barrel topology. Biochimica Et Biophysica Acta.
-
(2010)
Biochimica Et Biophysica Acta
-
-
Zeth, K.1
-
41
-
-
0032188847
-
Tom40 forms the hydrophilic channel of the mitochondrial import pore for preproteins
-
Hill K, Model K, Ryan MT, Dietmeier K, Martin F, et al. (1998) Tom40 forms the hydrophilic channel of the mitochondrial import pore for preproteins. Nature 395: 516-521.
-
(1998)
Nature
, vol.395
, pp. 516-521
-
-
Hill, K.1
Model, K.2
Ryan, M.T.3
Dietmeier, K.4
Martin, F.5
-
42
-
-
0346727130
-
Evolutionary conservation of biogenesis of beta barrel membrane proteins
-
Paschen SA, Waizenegger T, Stan T, Preuss M, Cyrklaff M, et al. (2003) Evolutionary conservation of biogenesis of beta barrel membrane proteins. Nature 426: 862-866.
-
(2003)
Nature
, vol.426
, pp. 862-866
-
-
Paschen, S.A.1
Waizenegger, T.2
Stan, T.3
Preuss, M.4
Cyrklaff, M.5
-
43
-
-
12844288890
-
The protein structure prediction problem could be solved using the current PDB library
-
Zhang Y, Skolnick J, (2005) The protein structure prediction problem could be solved using the current PDB library. Proc Natl Acad Sci U S A 102: 1029-1034.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 1029-1034
-
-
Zhang, Y.1
Skolnick, J.2
-
44
-
-
78651268103
-
OMPdb: a database of β-barrel outer membrane proteins from gram-negative bacteria
-
Tsirigos KD, Bagos PG, Hamodrakas SJ, (2010) OMPdb: a database of β-barrel outer membrane proteins from gram-negative bacteria. Nucleic Acids Research 39: D324-D331.
-
(2010)
Nucleic Acids Research
, vol.39
, pp. 324-331
-
-
Tsirigos, K.D.1
Bagos, P.G.2
Hamodrakas, S.J.3
-
45
-
-
33845280446
-
Comparing the polarities of the amino acids: sidechain distribution coefficients between the vapor phase, cyclohexane, 1-octanol, and neutral aqueous solution
-
Radzicka A, Wolfenden R, (1988) Comparing the polarities of the amino acids: sidechain distribution coefficients between the vapor phase, cyclohexane, 1-octanol, and neutral aqueous solution. Biochemistry 27: 1664-1670.
-
(1988)
Biochemistry
, vol.27
, pp. 1664-1670
-
-
Radzicka, A.1
Wolfenden, R.2
-
46
-
-
0035876470
-
Folding of β-sheets in membranes: specificity and promiscuity in peptide model systems
-
Bishop CM, Walkenhorst WF, Wimley WC, (2001) Folding of β-sheets in membranes: specificity and promiscuity in peptide model systems. Journal of Molecular Biology 309: 975-988.
-
(2001)
Journal of Molecular Biology
, vol.309
, pp. 975-988
-
-
Bishop, C.M.1
Walkenhorst, W.F.2
Wimley, W.C.3
-
47
-
-
77749246164
-
The transition state for folding of an outer membrane protein
-
Huysmans GHM, Baldwin SA, Brockwell DJ, Radford SE, (2010) The transition state for folding of an outer membrane protein. Proc Natl Acad Sci U S A 107: 4099-4104.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 4099-4104
-
-
Huysmans, G.H.M.1
Baldwin, S.A.2
Brockwell, D.J.3
Radford, S.E.4
-
48
-
-
0033586795
-
Outer membrane protein a of escherichia coli inserts and folds into lipid bilayers by a concerted mechanism
-
Kleinschmidt JH, den Blaauwen T, Driessen AJ, Tamm LK, (1999) Outer membrane protein a of escherichia coli inserts and folds into lipid bilayers by a concerted mechanism. Biochemistry 38: 5006-5016.
-
(1999)
Biochemistry
, vol.38
, pp. 5006-5016
-
-
Kleinschmidt, J.H.1
den Blaauwen, T.2
Driessen, A.J.3
Tamm, L.K.4
-
49
-
-
0034079112
-
Selective constraints, amino acid composition, and the rate of protein evolution
-
Tourasse N, Li W, (2000) Selective constraints, amino acid composition, and the rate of protein evolution. Mol Biol Evol 17: 664-656.
-
(2000)
Mol Biol Evol
, vol.17
, pp. 656-664
-
-
Tourasse, N.1
Li, W.2
-
50
-
-
0026331041
-
Molecular architecture and electrostatic properties of a bacterial porin
-
Weiss MS, Abele U, Weckesser J, Welte W, Schiltz E, et al. (1991) Molecular architecture and electrostatic properties of a bacterial porin. Science 254: 1627-1630.
-
(1991)
Science
, vol.254
, pp. 1627-1630
-
-
Weiss, M.S.1
Abele, U.2
Weckesser, J.3
Welte, W.4
Schiltz, E.5
-
51
-
-
78649749532
-
The crystal structure of OprG from pseudomonas aeruginosa, a potential channel for transport of hydrophobic molecules across the outer membrane
-
Touw DS, Patel DR, van den Berg B, (2010) The crystal structure of OprG from pseudomonas aeruginosa, a potential channel for transport of hydrophobic molecules across the outer membrane. PloS One 5: e15016.
-
(2010)
PloS One
, vol.5
-
-
Touw, D.S.1
Patel, D.R.2
van den Berg, B.3
-
52
-
-
62649094413
-
Transmembrane passage of hydrophobic compounds through a protein channel wall
-
Hearn EM, Patel DR, Lepore BW, Indic M, van den Berg B, (2009) Transmembrane passage of hydrophobic compounds through a protein channel wall. Nature 458: 367-370.
-
(2009)
Nature
, vol.458
, pp. 367-370
-
-
Hearn, E.M.1
Patel, D.R.2
Lepore, B.W.3
Indic, M.4
van den Berg, B.5
-
53
-
-
77956374052
-
Assembly of outer-membrane proteins in bacteria and mitochondria
-
Tommassen J, (2010) Assembly of outer-membrane proteins in bacteria and mitochondria. Microbiology (Reading, England) 156: 2587-2596.
-
(2010)
Microbiology (Reading, England)
, vol.156
, pp. 2587-2596
-
-
Tommassen, J.1
-
54
-
-
77952306070
-
The mitochondrial porin, VDAC, has retained the ability to be assembled in the bacterial outer membrane
-
Walther DM, Bos MP, Rapaport D, Tommassen J, (2010) The mitochondrial porin, VDAC, has retained the ability to be assembled in the bacterial outer membrane. Molecular Biology and Evolution 27: 887-895.
-
(2010)
Molecular Biology and Evolution
, vol.27
, pp. 887-895
-
-
Walther, D.M.1
Bos, M.P.2
Rapaport, D.3
Tommassen, J.4
-
55
-
-
62449307987
-
Signals in bacterial beta-barrel proteins are functional in eukaryotic cells for targeting to and assembly in mitochondria
-
Walther DM, Papic D, Bos MP, Tommassen J, Rapaport D, (2009) Signals in bacterial beta-barrel proteins are functional in eukaryotic cells for targeting to and assembly in mitochondria. Proc Natl Acad Sci U S A 106: 2531-2536.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 2531-2536
-
-
Walther, D.M.1
Papic, D.2
Bos, M.P.3
Tommassen, J.4
Rapaport, D.5
-
56
-
-
75549086416
-
The genomes on line database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata
-
Liolios K, Chen IA, Mavromatis K, Tavernarakis N, Hugenholtz P, et al. (2010) The genomes on line database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata. Nucleic Acids Research 38: D346-354.
-
(2010)
Nucleic Acids Research
, vol.38
, pp. 346-354
-
-
Liolios, K.1
Chen, I.A.2
Mavromatis, K.3
Tavernarakis, N.4
Hugenholtz, P.5
-
57
-
-
33846057724
-
NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins
-
Pruitt KD, Tatusova T, Maglott DR, (2007) NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins. Nucleic Acids Research 35: D61-65.
-
(2007)
Nucleic Acids Research
, vol.35
, pp. 61-65
-
-
Pruitt, K.D.1
Tatusova, T.2
Maglott, D.R.3
-
58
-
-
36448991500
-
Clustal w and clustal x version 2.0
-
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, et al. (2007) Clustal w and clustal x version 2.0. Bioinformatics 23: 2947-8.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
-
59
-
-
0023989064
-
Improved tools for biological sequence comparison
-
Pearson WR, Lipman DJ, (1988) Improved tools for biological sequence comparison. Proc Natl Acad Sci U S A 85: 2444-8.
-
(1988)
Proc Natl Acad Sci U S A
, vol.85
, pp. 2444-2448
-
-
Pearson, W.R.1
Lipman, D.J.2
-
60
-
-
0032416149
-
Models of molecular evolution and phylogeny
-
Liò P, Goldman N, (1998) Models of molecular evolution and phylogeny. Genome Research 8: 1233-1244.
-
(1998)
Genome Research
, vol.8
, pp. 1233-1244
-
-
Liò, P.1
Goldman, N.2
-
62
-
-
0025259313
-
Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes
-
Karlin S, Altschul SF, (1990) Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes. Proc Natl Acad Sci U S A 87: 2264-8.
-
(1990)
Proc Natl Acad Sci U S A
, vol.87
, pp. 2264-2268
-
-
Karlin, S.1
Altschul, S.F.2
|