Effect of glycerol and dimethyl sulfoxide on the phase behavior of lysozyme: Theory and experiments

Journal of Chemical Physics

Volumn 136, Issue 1, 2012, Pages

  Gögelein, Christoph ^a   Wagner, Dana ^b   Cardinaux, Frédéric ^b   Nägele, Gerhard ^c   Egelhaaf, Stefan U ^b  

^a MAX PLANCK INSTITUTE FOR DYNAMICS AND SELF ORGANIZATION   (Germany)

^b HEINRICH HEINE UNIVERSITY   (Germany)

^c FORSCHUNGSZENTRUM JÜLICH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

CUT-OFF LENGTH; DIELECTRIC CONSTANTS; FLUID-SOLID TRANSITION; GAS-LIQUID COEXISTENCE; HAMAKER CONSTANTS; LYSOZYME SOLUTIONS; PAIR INTERACTIONS; PROTEIN SOLUTION; SECOND VIRIAL COEFFICIENTS; STATIC LIGHT SCATTERING; THEORETICAL PREDICTION; THERMODYNAMIC PERTURBATION THEORY;

ENZYMES; EXPERIMENTS; GLYCEROL; ORGANIC SOLVENTS; PERTURBATION TECHNIQUES; REFRACTIVE INDEX; SODIUM CHLORIDE;

DIMETHYL SULFOXIDE;

DIMETHYL SULFOXIDE; GLYCEROL; LYSOZYME; SODIUM CHLORIDE;

ARTICLE; CHEMISTRY; METABOLISM; PROTEIN BINDING; QUANTUM THEORY; THERMODYNAMICS;

DIMETHYL SULFOXIDE; GLYCEROL; MURAMIDASE; PROTEIN BINDING; QUANTUM THEORY; SODIUM CHLORIDE; THERMODYNAMICS;

EID: 84855557790     PISSN: 00219606     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.3673442     Document Type: Article

References (80)

1. A. McPherson, Crystallization of Biological Macromolecules, 1st ed. (Cold Spring Harbor, New York, 1999).
2. R. Sousa, Acta Crystallogr., Sect. D: Biol. Crystallogr. 51, 271 (1995). 10.1107/S0907444994014009
3. T. Arakawa, Y. Kita, and S. N. Timasheff, Biophys. Chem. 131, 62 (2007). 10.1016/j.bpc.2007.09.004 (Pubitemid 350047519)
4. T. Kamiyama, H. L. Liu, and T. Kimura, J. Therm. Anal. Calorim. 95, 353 (2009). 10.1007/s10973-008-9232-7
5. A. McPherson, Eur. J. Biochem. 189, 1 (1990). 10.1111/j.1432-1033.1990. tb15454.x
6. P. R. ten Wolde and D. Frenkel, Science 277, 1975 (1997). 10.1126/science.277.5334.1975 (Pubitemid 27449135)
7. H. Sedgwick, K. Kroy, A. Salonen, M. B. Robertson, S. U. Egelhaaf, and W. C. K. Poon, Eur. Phys. J. E 16, 77 (2005). 10.1140/epje/e2005-00009-x (Pubitemid 40226350)
8. J. N. Israelachvili, Intermolecular and Surface Forces (Academic, London, 1991).
9. P. N. Pusey, in Liquids, Freezing and Glass Transition, edited by, J. Hansen, D. Levesque, and, J. Zinn-Justin, (Elsevier Science Publishers B.V., Les Houches, 1991).
10. J. A. Barker and D. Henderson, Rev. Mod. Phys. 1976, 587 (1976). 10.1103/RevModPhys.48.587
11. T. Knubovets, J. J. Osterhout, P. J. Connolly, and A. M. Klibanov, Proc. Natl. Acad. Sci. U.S.A. 96, 1262 (1999). 10.1073/pnas.96.4.1262 (Pubitemid 29098439)
12. V. Vagenende, M. G. S. Yap, and B. L. Trout, Biochemistry 48, 11084 (2009). 10.1021/bi900649t
13. I. K. Voets, W. A. Cruz, C. Moitzi, P. Lindner, E. P. G. Areas, and P. Schurtenberger, J. Phys. Chem. B 114, 11875 (2010). 10.1021/jp103515b
14. W. C. K. Poon, S. U. Egelhaaf, P. A. Beales, A. Salonen, and L. Sawyer, J. Phys.: Condens. Matter 12, L569 (2000). 10.1088/0953-8984/12/35/103
15. P. Warren, J. Phys.: Condens. Matter 14, 7617 (2002). 10.1088/0953-8984/14/33/305 (Pubitemid 34992281)
16. G. Pellicane, D. Costa, and C. Caccamo, J. Phys.: Condens. Matter 15, 375 (2003). 10.1088/0953-8984/15/3/305
17. M. L. Broide, T. M. Tominc, and M. D. Saxowsky, Phys. Rev. E 53, 6325 (1996). 10.1103/PhysRevE.53.6325
18. M. Farnum and C. Zukoski, Biophys. J. 76, 2716 (1999). 10.1016/S0006-3495(99)77424-2
19. A. Priev, A. Almagor, S. Yedgar, and B. Gavish, Biochemistry 35, 2061 (1996). 10.1021/bi951842r (Pubitemid 26071640)
20. R. Sinibaldi, M. G. Ortore, F. Spinozzi, F. Carsughi, H. Frielinghaus, S. Cinelli, G. Onori, and P. Mariani, J. Chem. Phys. 126, 235101 (2007). 10.1063/1.2735620 (Pubitemid 47141505)
21. F. Merzel and J. C. Smith, Proc. Natl. Acad. Sci. U.S.A. 99, 5378 (2002). 10.1073/pnas.082335099 (Pubitemid 34411556)
22. A. Esposito, L. Comez, S. Cinelli, F. Scarponi, and G. Onori, J. Phys. Chem. B 113, 16420 (2009). 10.1021/jp906739v
23. H. Sedgwick, J. E. Cameron, W. C. K. Poon, and S. U. Egelhaaf, J. Chem. Phys. 127, 125102 (2007). 10.1063/1.2771168 (Pubitemid 47502690)
24. J. Lu, X.-J. Wang, and C.-B. Ching, Cryst. Growth Des. 3, 83 (2003). 10.1021/cg0200412
25. R. A. Gosavi, V. Bhamidi, S. Varanasi, and C. A. Schall, Langmuir 25, 4579 (2011). 10.1021/la803185m
26. A. M. Kulkarni and C. F. Zukoski, Langmuir 18, 3090 (2002). 10.1021/la011282z (Pubitemid 35383764)
27. M. Muschol and F. Rosenberger, J. Chem. Phys. 103, 10424 (1995). 10.1063/1.469891
28. D. E. Kuehner, C. Heyer, C. Ramsch, U. M. Fornfeld, H. W. Blanch, and J. M. Prausnitz, Biophys. J. 73, 3211 (1997). 10.1016/S0006-3495(97)78346-2
29. M. Kerker, The Scattering of Light and Other Electromagnetic Radiation (Academic, New York, 1969).
30. J. Narayanan and X. Y. Liu, Biophys. J. 84, 523 (2003). 10.1016/S0006-3495(03)74871-1
31. M. Itakura, K. Shimada, S. Matsuyama, T. Saito, and S. Kinugasa, J. Appl. Polym. Sci. 99, 1953 (2006). 10.1002/app.22695
32. D. Voet and J. Voet, Biochemistry (Wiley, New York, 1990).
33. A. Stradner, H. Sedgwick, F. Cardinaux, W. C. K. Poon, S. U. Egelhaaf, and P. Schurtenberger, Nature (London) 432, 492 (2004). 10.1038/nature03109 (Pubitemid 39576527)
34. R. A. Curtis, C. Steinbrecher, M. Heinemann, H. W. Blanch, and J. M. Prausnitz, Biophys. Chem. 98, 249 (2002). 10.1016/S0301-4622(02)00071-6 (Pubitemid 34786438)
35. W. B. Russel and D. W. Benzing, J. Colloid Interface Sci. 83, 163 (1981). 10.1016/0021-9797(81)90021-7
36. A. R. Denton, Phys. Rev. E 62, 3855 (2000). 10.1103/PhysRevE.62.3855
37. C. Tanford and R. Roxby, Biochemistry 11, 2192 (1972). 10.1021/bi00761a029
38. D. C. Yin, Y. Inatomi, N. I. Wakayama, and W. D. Huang, Cryst. Res. Technol. 38, 785 (2003). 10.1002/crat.200310096
39. J. J. Dwyer, A. G. Gittis, D. A. Karp, E. E. Lattman, D. S. Spencer, W. E. Stites, and B. Garcia-Moreno, Biophys. J. 79, 1610 (2000). 10.1016/S0006-3495(00)76411-3
40. S. C. Harvey and P. Hoekstra, J. Phys. Chem. 76, 2987 (1972). 10.1021/j100665a011
41. L. Rashkovich, V. Smirnov, and E. Petrova, Phys. Solid State 50, 631 (2008). 10.1134/S1063783408040069
42. J. W. Pitera, M. Falta, and W. F. van Gunsteren, Biophys. J. 80, 2546 (2001). 10.1016/S0006-3495(01)76226-1
43. C. R. Lide, CRC Handbook of Chemistry and Physics, 86th ed. (CRC, New York, 2005).
44. The Dow Chemical Company (2010), see http://www.dow.com/glycerine/ resources/.
45. Integrated Publishing (2010), see http://www.tpub.com/content/ArmyCRREL/ SR98-02/SR98-020009.htm.
46. Z. Lu, E. Manias, D. D. MacDonald, and M. Lanagan, J. Phys. Chem. A 113, 12207 (2009). 10.1021/jp9059246
47. K. Nortemann, J. Hilland, and U. Kaatze, J. Phys. Chem. A 101, 6864 (1997). 10.1021/jp971623a
48. R. Buchner, G. T. Hefter, and P. M. May, J. Phys. Chem. A 103, 1 (1999). 10.1021/jp982977k
49. R. Gulich, M. Kohler, P. Lunkenheimer, and A. Loidl, Radiat. Environ. Biophys. 48, 107 (2009). 10.1007/s00411-008-0195-7
50. W. Liu, D. Bratko, J. M. Prausnitz, and H. W. Blanch, Biophys. Chem. 107, 289 (2004). 10.1016/j.bpc.2003.09.012 (Pubitemid 38221277)
51. W. H. Press, S. A. Teukolsky, W. T. Vetterling, and B. P. Flannery, Numerical Recipes in C, 2nd ed. (Cambridge University Press, New York, 1992).
52. O. D. Velev, E. W. Kaler, and A. M. Lenhoff, Biophys. J. 75, 2682 (1998). 10.1016/S0006-3495(98)77713-6
53. A. Tardieu, A. Le Verge, M. Malfois, F. Bonneté, S. Finet, M. Ris-Kautt, and L. Belloni, J. Cryst. Growth 196, 193 (1999). 10.1016/S0022-0248(98)00828-8
54. S. U. Egelhaaf, V. Lobaskin, H. H. Bauer, H. P. Merkle, and P. Schurtenberger, Eur. Phys. J. E 13, 153 (2004). 10.1140/epje/e2004-00051-2 (Pubitemid 40877415)
55. M. H. J. Hagen and D. Frenkel, J. Chem. Phys. 101, 4093 (1994). 10.1063/1.467526
56. T. W. Cochran and Y. C. Chiew, J. Chem. Phys. 121, 1480 (2004). 10.1063/1.1759616
57. F. W. Tavares, D. Bratko, A. Striolo, H. W. Blanch, and J. M. Prausnitz, J. Chem. Phys. 120, 9859 (2004). 10.1063/1.1697387
58. M. Boström, F. W. Tavares, B. W. Ninham, and J. M. Prausnitz, J. Phys. Chem. B 110, 24757 (2006). 10.1021/jp061191g (Pubitemid 46065781)
59. E. R. A. Lima, E. C. Biscaia Jr., M. Boström, F. W. Tavares, and J. M. Prausnitz, J. Phys. Chem. C 111, 16055 (2007). 10.1021/jp074807q (Pubitemid 350097675)
60. C. Gögelein, G. Nägele, R. Tuinier, T. Gibaud, A. Stradner, and P. Schurtenberger, J. Chem. Phys. 129, 085102 (2008). 10.1063/1.2951987
61. N. Dorsaz, G. M. Thurston, A. Stradner, P. Schurtenberger, and G. Foffi, J. Phys. Chem. B 113, 1693 (2009). 10.1021/jp807103f
62. L. Verlet and J. J. Weis, Phys. Rev. A 5, 939 (1972). 10.1103/PhysRevA.5.939
63. M. S. Wertheim, Phys. Rev. Lett. 10, 321 (1963). 10.1103/PhysRevLett.10. 321
64. G. J. Throop and R. J. Bearman, J. Chem. Phys. 42, 2408 (1965). 10.1063/1.1696308
65. J. M. Kincaid and J. J. Weis, Mol. Phys. 34, 931 (1977). 10.1080/00268977700102241
66. N. F. Carnahan and K. E. Starling, J. Chem. Phys. 51, 635 (1969). 10.1063/1.1672048
67. W. W. Wood, J. Chem. Phys. 20, 1334 (1952). 10.1063/1.1700747
68. K. P. Shukla, J. Chem. Phys. 112, 10358 (2000). 10.1063/1.481673
69. L. Lue and J. M. Prausnitz, J. Chem. Phys. 108, 5529 (1998). 10.1063/1.475942
70. D. Fu, Y. Li, and J. Wu, Phys. Rev. E 68, 011403 (2003). 10.1103/PhysRevE.68.011403
71. N. Asherie, A. Lomakin, and G. B. Benedek, Phys. Rev. Lett. 77, 4832 (1996). 10.1103/PhysRevLett.77.4832
72. D. Rosenbaum, P. C. Zamora, and C. F. Zukoski, Phys. Rev. Lett. 76, 150 (1996). 10.1103/PhysRevLett.76.150
73. M. Muschol and F. Rosenberger, J. Chem. Phys. 107, 1953 (1997). 10.1063/1.474547
74. D. F. Rosenbaum and C. F. Zukoski, J. Cryst. Growth 169, 752 (1996). 10.1016/S0022-0248(96)00455-1 (Pubitemid 126362594)
75. H. Liu, S. Garde, and S. Kumar, J. Chem. Phys. 123, 174505 (2005). 10.1063/1.2085051 (Pubitemid 41567422)
76. A. George and W. Wilson, Acta Crystallogr., Sect. D: Biol. Crystallogr. 50, 361 (1994). 10.1107/S0907444994001216
77. W. C. K. Poon, Phys. Rev. E 55, 3762 (1997). 10.1103/PhysRevE.55.3762
78. A. J. Archer, D. Pini, R. Evans, and L. Reatto, J. Chem. Phys. 126, 014104 (2007). 10.1063/1.2405355 (Pubitemid 46068393)
79. A. Lomakin, N. Asherie, and G. B. Benedek, Proc. Natl. Acad. Sci. U.S.A. 96, 9465 (1999). 10.1073/pnas.96.17.9465 (Pubitemid 29398753)
80. C. Gögelein, F. Romano, F. Sciortino, and A. Giacometti, Fluid-fluid and fluid-solid transitions in the Kern-Frenkel model from Barker-Henderson thermodynamic perturbation theory, J. Chem. Phys. (submitted).