Rapid molecular detection methods for arboviruses of livestock of importance to northern Europe

Journal of Biomedicine and Biotechnology

Volumn 2012, Issue , 2012, Pages

  Johnson, Nicholas ^a   Voller, Katja ^a   Phipps, L Paul ^a   Mansfield, Karen ^a   Fooks, Anthony R ^a,b  

^a VETERINARY LABORATORIES AGENCY   (United Kingdom)

^b UNIVERSITY OF LIVERPOOL   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

AFRICAN HORSE SICKNESS VIRUS; AFRICAN SWINE FEVER VIRUS; AKABANE VIRUS; ARBOVIRUS; BLUETONGUE ORBIVIRUS; CRIMEAN CONGO HEMORRHAGIC FEVER; CULICOIDES; DISEASE CARRIER; EARLY DIAGNOSIS; EQUINE ENCEPHALOSIS VIRUS; EUROPE; GEOGRAPHIC DISTRIBUTION; JAPANESE ENCEPHALITIS VIRUS; LIVESTOCK; MOLECULAR DIAGNOSIS; MOSQUITO; NAIRO VIRUS; NAIROBI SHEEP DISEASE VIRUS; NONHUMAN; NUCLEOTIDE SEQUENCE; REVIEW; RIFT VALLEY FEVER BUNYAVIRUS; TICK; TICK BORNE ENCEPHALITIS FLAVIVIRUS; VESICULAR STOMATITIS VIRUS; VIRUS INFECTION; VIRUS TRANSMISSION; WESSELBRON FLAVIVIRUS; WEST NILE FLAVIVIRUS; ZOONOSIS; ANIMAL; ANIMAL DISEASE; CERATOPOGONIDAE; GENETICS; ISOLATION AND PURIFICATION; POLYMERASE CHAIN REACTION; VIROLOGY;

ARBOVIRUS;

ANIMALS; ARBOVIRUS INFECTIONS; ARBOVIRUSES; CERATOPOGONIDAE; CULICIDAE; EUROPE; INSECT VECTORS; LIVESTOCK; MOLECULAR DIAGNOSTIC TECHNIQUES; POLYMERASE CHAIN REACTION; TICKS;

EID: 84855529710     PISSN: 11107243     EISSN: 11107251     Source Type: Journal    
DOI: 10.1155/2012/719402     Document Type: Review

References (190)

1. Odend Hal S., The Geographical Distribution of Animal Viral Diseases 1983 New York, NY, USA Academic Press
2. Gubler D. J., Human arbovirus infections worldwide Annals of the New York Academy of Sciences 2001 951 13 24 (Pubitemid 34060029)
3. Kramer L. D., Styer L. M., Ebel G. D., A global perspective on the epidemiology of West Nile virus Annual Review of Entomology 2008 53 61 81 (Pubitemid 351341931)
4. Carpenter S., Wilson A., Mellor P. S., Culicoides and the emergence of bluetongue virus in northern Europe Trends in Microbiology 2009 17 4 172 178
5. Gould E. A., Higgs S., Buckley A., Gritsun T. S., Potential arbovirus emergence and implications for the United Kingdom Emerging Infectious Diseases 2006 12 4 549 555
6. Vorou R. M., Papavassiliou V. G., Tsiodras S., Emerging zoonoses and vector-borne infections affecting humans in Europe Epidemiology and Infection 2007 135 8 1231 1247 (Pubitemid 351148083)
7. Medlock J. M., Snow K. R., Leach S., Possible ecology and epidemiology of medically important mosquito-borne arboviruses in Great Britain Epidemiology and Infection 2007 135 3 466 482 (Pubitemid 46443433)
8. Gould E., Solomon T., Pathogenic flaviviruses The Lancet 2008 371 9611 500 509 (Pubitemid 351199886)
9. Gale P., Drew T., Phipps L. P., David G., Wooldridge M., The effect of climate change on the occurrence and prevalence of livestock diseases in Great Britain Journal of Applied Microbiology 2009 106 5 1409 1423
10. McGuire K., Holmes E. C., Gao G. F., Reid H. W., Gould E. A., Tracing the origins of louping ill virus by molecular phylogenetic analysis Journal of General Virology 1998 79 5 981 988 (Pubitemid 28203838)
11. Buckley A., Dawson A., Moss S. R., Hinsley S. A., Bellamy P. E., Gould E. A., Serological evidence of West Nile virus, Usutu virus and Sindbis virus infection of birds in the UK Journal of General Virology 2003 84 10 2807 2817 (Pubitemid 37220259)
12. Autorino G. L., Battisti A., Deubel V., Ferrari G., Forletta R., Giovannini A., Lelli R., Murri S., Scicluna M. T., West Nile virus epidemic in horses, Tuscany region, Italy Emerging Infectious Diseases 2002 8 12 1372 1378 (Pubitemid 36008771)
13. Monarco F., Savini G., Calistri P., 2009 West Nile disease epidemic in Italy: first evidence of overwintering in Western Europe? Research in Veterinary Science 2011 91 321 326
14. Hublek Z., An annotated checklist of pathogenic microorganisms associated with migratory birds Journal of Wildlife Diseases 2004 40 4 639 659
15. Waldenstrm J., Lundkvist A., Falk K. I., Garpmo U., Bergstrm S., Lindegren G., Sjstedt A., Mejlon H., Fransson T., Haemig P. D., Olsen B., Migrating birds and tickborne encephalitis virus Emerging Infectious Diseases 2007 13 8 1215 1218 (Pubitemid 47359168)
16. Saegerman C., Berkvens D., Mellor P. S., Bluetongue epidemiology in the European Union Emerging Infectious Diseases 2008 14 4 539 544 (Pubitemid 351520853)
17. Henrich M., Reinacher M., Hamann H. P., Lethal bluetongue virus infection in an alpaca Veterinary Record 2007 161 22 764 (Pubitemid 350273510)
18. Maclachlan N. J., Drew C. P., Darpel K. E., Worwa G., The Pathology and Pathogenesis of Bluetongue Journal of Comparative Pathology 2009 141 1 1 16
19. Meyer G., Lacroux C., Léger S., Top S., Goyeau K., Deplanche M., Lemaire M., Lethal bluetongue virus serotype 1 infection in llamas Emerging Infectious Diseases 2009 15 4 608 610
20. Dercksen D., Nibbelink N. G., Paauwe R., Backx A., Van Rijn P., Vellema P., First outbreak of bluetongue in goats in the Netherlands Tijdschrift voor Diergeneeskunde 2007 132 20 786 790 (Pubitemid 350012344)
21. Erasmus B. J., Bluetongue in sheep and goats Australian veterinary journal 1975 51 4 165 170
22. Hofmann M. A., Renzullo S., Mader M., Chaignat V., Worwa G., Thuer B., Genetic characterization of toggenburg orbivirus, a new bluetongue virus, from goats, Switzerland Emerging Infectious Diseases 2008 14 12 1855 1861
23. Maan S., Maan N. S., Nomikou K., Novel bluetongue virus serotype from Kuwait Emerging Infectious Diseases 2011 17 886 889
24. Mellor P. S., Carpenter S., Harrup L., Baylis M., Mertens P. P. C., Bluetongue in Europe and the Mediterranean Basin: history of occurrence prior to 2006 Preventive Veterinary Medicine 2008 87 1-2 4 20
25. Sternberg Lewerin S., Hallgren G., Mieziewska K., Berndtsson L. T., Chirico J., Elvander M., Infection with bluetongue virus serotype 8 in Sweden in 2008 The Veterinary Record 2010 167 5 165 170
26. Szmaragd C., Wilson A. J., Carpenter S., Wood J. L. N., Mellor P. S., Gubbins S., The spread of bluetongue virus serotype 8 in Great Britain and its control by vaccination PLoS ONE 2010 5 2, article e9353
27. Maan S., Maan N. S., van Rijn P. A., van Gennip R. G. P., Sanders O., Wright I. M., Batten C., Hoffmann B., Eschbaumer M., Oura C. A. L., Potgieter A. C., Nomikou K., Mertens P. P. C., Full genome characterisation of bluetongue virus serotype 6 from the Netherlands 2008 and comparison to other field and vaccine strains PLoS ONE 2010 5 4, article e10323
28. Mellor P. S., Wittmann E. J., Bluetongue virus in the mediterranean basin 19982001 Veterinary Journal 2002 164 1 20 37 (Pubitemid 38001826)
29. De Liberato C., Scavia G., Lorenzetti R., Scaramozzino P., Amaddeo D., Cardeti G., Scicluna M., Ferrari G., Autorino G. L., Identification of Culicoides obsoletus (Diptera: Ceratopogonidae) as a vector of bluetongue virus in central Italy Veterinary Record 2005 156 10 301 304 (Pubitemid 40424983)
30. Meiswinkel R., Baldet T., de Deken R., Takken W., Delécolle J. C., Mellor P. S., The 2006 outbreak of bluetongue in northern Europe-The entomological perspective Preventive Veterinary Medicine 2008 87 1-2 55 63
31. McColl K. A., Gould A. R., Detection and characterisation of bluetongue virus using the polymerase chain reaction Virus Research 1991 21 1 19 34
32. Wilson W. C., Chase C. C. L., Nested and multiplex polymerase chain reactions for the identification of bluetongue virus infection in the biting midge, Culicoides variipennis Journal of Virological Methods 1993 45 1 39 47
33. Billinis C., Koumbati M., Spyrou V., Nomikou K., Mangana O., Panagiotidis C. A., Papadopoulos O., Bluetongue virus diagnosis of clinical cases by a duplex reverse transcription-PCR: A comparison with conventional methods Journal of Virological Methods 2001 98 1 77 89 (Pubitemid 32822805)
34. Wilson W. C., Stallknecht D. E., Mecham J. O., Field deployable real-time polymerase chain reaction detection of bluetongue and epizootic haemorrhagic disease viral ribonucleic acid Veterinia Italiana 2004 40 587 593
35. Jiménez-Clavero M. A., Agero M., San Miguel E., Mayoral T., Lpez M. C., Ruano M. J., Romero E., Monaco F., Polci A., Savini G., Gmez-Tejedor C., High throughput detection of bluetongue virus by a new real-time fluorogenic reverse transcription-polymerase chain reaction: application on clinical samples from current Mediterranean outbreaks Journal of Veterinary Diagnostic Investigation 2006 18 1 7 17 (Pubitemid 43188309)
36. Mertens P. P. C., Maan N. S., Prasad G., Samuel A. R., Shaw A. E., Potgieter A. C., Anthony S. J., Maan S., Design of primers and use of RT-PCR assays for typing European bluetongue virus isolates: differentiation of field and vaccine strains Journal of General Virology 2007 88 10 2811 2823 (Pubitemid 47555036)
37. Orr G., Ferrando M. L., Meloni M., Liciardi M., Savini G., De Santis P., Rapid detection and quantitation of Bluetongue virus (BTV) using a Molecular Beacon fluorescent probe assay Journal of Virological Methods 2006 137 1 34 42 (Pubitemid 44209272)
38. Anthony S., Jones H., Darpel K. E., Elliott H., Maan S., Samuel A., Mellor P. S., Mertens P. P. C., A duplex RT-PCR assay for detection of genome segment 7 (VP7 gene) from 24 BTV serotypes Journal of Virological Methods 2007 141 2 188 197 (Pubitemid 46466973)
39. Shaw A. E., Monaghan P., Alpar H. O., Anthony S., Darpel K. E., Batten C. A., Guercio A., Alimena G., Vitale M., Bankowska K., Carpenter S., Jones H., Oura C. A. L., King D. P., Elliott H., Mellor P. S., Mertens P. P. C., Development and initial evaluation of a real-time RT-PCR assay to detect bluetongue virus genome segment 1 Journal of Virological Methods 2007 145 2 115 126 (Pubitemid 47337125)
40. Toussaint J. F., Sailleau C., Breard E., Zientara S., De Clercq K., Bluetongue virus detection by two real-time RT-qPCRs targeting two different genomic segments Journal of Virological Methods 2007 140 1-2 115 123 (Pubitemid 46185600)
41. Verwoerd D. W., Louw H., Oellermann R. A., Characterization of bluetongue virus ribonucleic acid Journal of Virology 1970 5 1 1 7
42. Le Blanc N., Rassmussen T. B., Fernandez J., Development of a real-time RT-PCR assay based on primer-probe energy transfer for the detection of all serotypes of bluetongue virus Journal Virological Methods 1970 167 165 171
43. Mellor P. S., Hamblin C., African horse sickness Veterinary Research 2004 35 4 445 466 (Pubitemid 39161933)
44. Rodriguez M., Hooghuis H., Castano M., African horse sickness in Spain Veterinary Microbiology 1992 33 14 129 142
45. Portas M., Boinas F. S., Sousa J. O. E., Rawlings P., African horse sickness in Portugal: a successful eradication programme Epidemiology and Infection 1999 123 2 337 346 (Pubitemid 29509333)
46. Meiswinkel R., Paweska J. T., Evidence for a new field Culicoides vector of African horse sickness in South Africa Preventive Veterinary Medicine 2003 60 3 243 253 (Pubitemid 37060591)
47. Zientara S., Sailleau C., Moulay S., Plateau E., Crucire C., Diagnosis and molecular epidemiology of the African horse sickness virus by the polymerase chain reaction and restriction patterns Veterinary research 1993 24 5 385 395
48. Zientara S., Application of the polymerase chain reaction to the detection of African horse sickness viruses Journal of Virological Methods 1995 53 1 47 54
49. Moulay S., Zientara S., Sailleau C., Cruciere C., Detection of African horse sickness viruses by dot-blot hybridization using a digoxigenin-labelled probe Molecular and Cellular Probes 1995 9 4 233 237
50. Zientara S., Sailleau C., Moulay S., Cruciere C., Diagnosis of the African horse sickness virus serotype 4 by a one-tube, one manipulation RT-PCR reaction from infected organs Journal of Virological Methods 1994 46 2 179 188
51. Sailleau C., Hamblin C., Paweska J. T., Zientara S., Identification and differentiation of the nine African horse sickness virus serotypes by RT-PCR amplification of the serotype-specific genome segment 2 Journal of General Virology 2000 81 3 831 837 (Pubitemid 30105514)
52. Aradaib I. E., Mohemmed M. E. H., Sarr J. A., Idris S. H., Ali N. O. M., Majid A. A., Karrar A. E., Short communication: a simple and rapid method for detection of African horse sickness virus serogroup in cell cultures using RT-PCR Veterinary Research Communications 2006 30 3 319 324 (Pubitemid 43154425)
53. Agero M., Gmez-Tejedor C., Cubillo M.., Rubio C., Romero E., Jiménez-Clavero M. A., Real-time fluorogenic reverse transcription polymerase chain reaction assay for detection of African horse sickness virus Journal of Veterinary Diagnostic Investigation 2008 20 3 325 328 (Pubitemid 352844382)
54. Koekemoer J. J. O., Serotype-specific detection of African horsesickness virus by real-time PCR and the influence of genetic variations Journal of Virological Methods 2008 154 1-2 104 110
55. Rodriguez-Sanchez B., Fernandez-Pinero J., Sailleau C., Zientara S., Belak S., Arias M., Sanchez-Vizcaino J. M., Novel gel-based and real-time PCR assays for the improved detection of African horse sickness virus Journal of Virological Methods 2008 151 1 87 94
56. Fernandez-Pinero J., Fernandez-Pacheco P., Rodriguez B., Rapid and sensitive detection of African horse sickness virus by real-time PCR Research in Veterinary Science 2008 86 353 358
57. Quan M., Lourens C. W., MacLachlan N. J., Gardner I. A., Guthrie A. J., Development and optimisation of a duplex real-time reverse transcription quantitative PCR assay targeting the VP7 and NS2 genes of African horse sickness virus Journal of Virological Methods 2010 167 1 45 52
58. Aradaib I. E., PCR detection of African horse sickness virus serogroup based on genome segment three sequence analysis Journal of Virological Methods 2009 159 1 1 5
59. Yadin H., Brenner J., Bumbrov V., Oved Z., Stram Y., Klement E., Perl S., Anthony S., Maan S., Batten C., Mertens P. P. C., Epizootic haemorrhagic disease virus type 7 infection in cattle in Israel Veterinary Record 2008 162 2 53 56 (Pubitemid 351205905)
60. Weir R. P., Harmsen M. B., Hunt N. T., Blacksell S. D., Lunt R. A., Pritchard L. I., Newberry K. M., Hyatt A. D., Gould A. R., Melville L. F., EHDV-1, a new Australian serotype of epizootic haemorrhagic disease virus isolated from sentinel cattle in the Northern Territory Veterinary Microbiology 1997 58 24 135 143 (Pubitemid 28026778)
61. Bréard E., Sailleau C., Hamblin C., Graham S. D., Gourreau J. M., Zientara S., Outbreak of epizootic haemorrhagic disease on the island of Ré union Veterinary Record 2004 155 14 422 423 (Pubitemid 39386864)
62. Temizel E. M., Yesilbag K., Batten C., Senturk S., Maan N. S., Mertens P. P. C., Batmaz H., Epizootic hemorrhagic disease in cattle, Western Turkey Emerging Infectious Diseases 2009 15 2 317 319
63. Aradaib I. E., Wilson W. C., Cheney I. W., Pearson J. E., Osburn B. I., Application of PCR for specific identification of epizootic hemorrhagic disease virus serotype 2 Journal of Veterinary Diagnostic Investigation 1995 7 3 388 392
64. Harding M. J., Prud'homme I., Rola J., Dulac G. C., Development of PCR-based tests for the identification of North American isolates of epizootic haemorrhagic disease virus Canadian Journal of Veterinary Research 1996 60 1 59 64 (Pubitemid 126504266)
65. Aradaib I. E., Wilson W. C., Schore C. E., Mohammed M. E. H., Yilma T. D., Cullor J. S., Osburn B. I., PCR detection of North American and Central African isolates of epizootic hemorrhagic disease virus (EHDV) based on genome segment 10 of EHDV serotype 1 Journal of Clinical Microbiology 1998 36 9 2604 2608 (Pubitemid 28380963)
66. Aradaib I. E., Smith W. L., Osburn B. I., Cullor J. S., A multiplex PCR for simultaneous detection and differentiation of North American serotypes of bluetongue and epizootic hemorrhagic disease viruses Comparative Immunology, Microbiology and Infectious Diseases 2003 26 2 77 87 (Pubitemid 36221445)
67. Maan N. S., Maan S., Nomikou K., Johnson D. J., El Harrak M., Madani H., Yadin H., Incoglu S., Yesilbag K., Allison A. B., Stallknecht D. E., Batten C., Anthony S. J., Mertens P. P. C., RT-PCR assays for seven serotypes of epizootic haemorrhagic disease virus their use to type strains from the mediterranean region and North America PLoS ONE 2010 5 9, article e12782 1 13
68. Wilson W. C., O'Hearn E. S., Tellgren-Roth C., Stallknecht D. E., Mead D. G., Mecham J. O., Detection of all eight serotypes of Epizootic hemorrhagic disease virus by real-time reverse transcription polymerase chain reaction Journal of Veterinary Diagnostic Investigation 2009 21 2 220 225
69. Uren M. F., Bovine ephemeral disease Australian Veterinary Journal 1989 66 233 236
70. Nandi S., Negi B. S., Bovine ephemeral fever: a review Comparative Immunology, Microbiology and Infectious Diseases 1999 22 2 81 91 (Pubitemid 29067515)
71. Walker P. J., Bovine ephemeral fever in Australia and the world Current Topics in Microbiology and Immunology 2005 292 57 80 (Pubitemid 40593531)
72. Abu Elzein E. M. E., Gameel A. A., Al Afaleq A. I., Al Gundi O., Bukhari A., Bovine ephemeral fever in Saudi Arabia Veterinary Record 1997 140 24 630 631 (Pubitemid 127777157)
73. Yeruham I., Van Ham M., Stram Y., Friedgut O., Yadin H., Mumcuoglu K. Y., Braverman Y., Epidemiological investigation of bovine ephemeral fever outbreaks in Israel Veterinary Medicine International 2010 2010 5
74. Davies F. G., Walker A. R., The isolation of ephemeral fever virus from cattle and Culicoides midges in Kenya Veterinary Record 1974 95 3 63 64
75. St George T. D., Standfast H. A., Dyce A. L., Letter: the isolation of ephemeral fever virus from mosquitoes in Australia Australian Veterinary Journal 1976 52 5 242
76. Stram Y., Kuznetzova L., Levin A., Yadin H., Rubinstein-Giuni M., A real-time RT-quantative(q)PCR for the detection of bovine ephemeral fever virus Journal of Virological Methods 2005 130 1-2 1 6 (Pubitemid 41596977)
77. Zheng F., Lin G., Zhou J., Wang G., Cao X., Gong X., Qiu C., A reverse-transcription, loop-mediated isothermal amplification assay for detection of bovine ephemeral fever virus in the blood of infected cattle Journal of Virological Methods 2011 171 1 306 309
78. Kono R., Hirata M., Kaji M., Goto Y., Ikeda S., Yanase T., Kato T., Tanaka S., Tsutsui T., Imada T., Yamakawa M., Bovine epizootic encephalomyelitis caused by Akabane virus in southern Japan BMC Veterinary Research 2008 4, article 20
79. Taylor W. P., Mellor P. S., The distribution of Akabane virus in the Middle East Epidemiology and Infection 1994 113 1 175 185 (Pubitemid 24255403)
80. Ohashi S., Yoshida K., Yanase T., Kato T., Tsuda T., Simultaneous detection of bovine arboviruses using single-tube multiplex reverse transcription-polymerase chain reaction Journal of Virological Methods 2004 120 1 79 85 (Pubitemid 38968658)
81. Stram Y., Kuznetzova L., Guini M., Rogel A., Meirom R., Chai D., Yadin H., Brenner J., Detection and quantitation of Akabane and Aino viruses by multiplex real-time reverse-transcriptase PCR Journal of Virological Methods 2004 116 2 147 154 (Pubitemid 38120370)
82. Howell P. G., Groenewald D., Visage C. W., Bosman A. M., Coetzer J. A. W., Guthrie A. J., The classification of seven serotypes of equine encephalosis virus and the prevalence of homologous antibody in horses in South Africa Onderstepoort Journal of Veterinary Research 2002 69 1 79 93 (Pubitemid 34983796)
83. Mildenberg Z., Westcott D., Bellaiche M., Dastjerdi A., Steinbach F., Drew T., Equine encephalosis virus in Israel: rapid communication Transboundary and Emerging Diseases 2009 56 8 291
84. Paweska J. T., Venter G. J., Vector competence of Culicoides species and the seroprevalence of homologous neutralizing antibody in horses for six serotypes of equine encephalosis virus (EEV) in South Africa Medical and Veterinary Entomology 2004 18 4 398 407 (Pubitemid 40025001)
85. Rodrguez L. L., Emergence and re-emergence of vesicular stomatitis in the United States Virus Research 2002 85 2 211 219
86. Hole K., Clavijo A., Pineda L. A., Detection and serotype-specific differentiation of vesicular stomatitis virus using a multiplex, real-time, reverse transcription-polymerase chain reaction assay Journal of Veterinary Diagnostic Investigation 2006 18 2 139 146
87. Wilson W. C., Letchworth G. J., Jimenez C., Herrero M. V., Navarro R., Paz P., Cornish T. E., Smoliga G., Pauszek S. J., Dornak C., George M., Rodriguez L. L., Field evaluation of a multiplex real-time reverse transcription polymerase chain reaction assay for detection of Vesicular stomatitis virus Journal of Veterinary Diagnostic Investigation 2009 21 2 179 186
88. Weaver S. C., Powers A. M., Brault A. C., Barrett A. D. T., Molecular epidemiological studies of veterinary arboviral encephalitides Veterinary Journal 1999 157 2 123 138 (Pubitemid 129522683)
89. Lambert A. J., Martin D. A., Lanciotti R. S., Detection of North American eastern and western equine encephalitis viruses by nucleic acid amplification assays Journal of Clinical Microbiology 2003 41 1 379 385 (Pubitemid 36098603)
90. Eshoo M. W., Whitehouse C. A., Zoll S. T., Massire C., Pennella T. T. D., Blyn L. B., Sampath R., Hall T. A., Ecker J. A., Desai A., Wasieloski L. P., Li F., Turell M. J., Schink A., Rudnick K., Otero G., Weaver S. C., Ludwig G. V., Hofstadler S. A., Ecker D. J., Direct broad-range detection of alphaviruses in mosquito extracts Virology 2007 368 2 286 295 (Pubitemid 350016217)
91. Takashima I., Watanabe T., Ouchi N., Hashimoto N., Ecological studies of Japanese encephalitis virus in Hokkaido: interepidemic outbreaks of swine abortion and evidence for the virus to overwinter locally American Journal of Tropical Medicine and Hygiene 1988 38 2 420 427 (Pubitemid 18086129)
92. Gould E., Solomon T., Pathogenic flaviviruses The Lancet 2008 371 9611 500 509 (Pubitemid 351199886)
93. Rosen L., The natural history of Japanese encephalitis virus Annual Review of Microbiology 1986 40 395 414
94. Solomon T., Ni H., Beasley D. W. C., Ekkelenkamp M., Cardosa M. J., Barrett A. D. T., Origin and evolution of Japanese encephalitis virus in Southeast Asia Journal of Virology 2003 77 5 3091 3098 (Pubitemid 36228095)
95. Erlanger T. E., Weiss S., Keiser J., Utzinger J., Wiedenmayer K., Past, present, and future of Japanese encephalitis Emerging Infectious Diseases 2009 15 1 1 7
96. Yang D. K., Kweon C. H., Kim B. H., Lim S. I., Kim S. H., Kwon J. H., Han H. R., TaqMan reverse transcription polymerase chain reaction for the detection of Japanese encephalitis virus Journal of Veterinary Science 2004 5 4 345 351
97. Chao D. Y., Davis B. S., Chang G. J. J., Development of multiplex real-time reverse transcriptase PCR assays for detecting eight medically important flaviviruses in mosquitoes Journal of Clinical Microbiology 2007 45 2 584 589
98. Parida M. M., Santhosh S. R., Dash P. K., Tripathi N. K., Saxena P., Ambuj S., Sahni A. K., Lakshmuna Rao P. V., Morita K., Development and evaluation of reverse transcription-loop-mediated isothermal amplification assay for rapid and real-time detection of Japanese encephalitis virus Journal of Clinical Microbiology 2006 44 11 4172 4178 (Pubitemid 44737265)
99. Toriniwa H., Komiya T., Rapid detection and quantification of Japanese encephalitis virus by real-time reverse transcription loop-mediated isothermal amplification Microbiology and Immunology 2006 50 5 379 387 (Pubitemid 43773839)
100. Gerdes G. H., Rift Valley fever Revue Science and Technology Office International Epizooties 2004 23 613 623 (Pubitemid 40180988)
101. Bird B. H., Ksiazek T. G., Nichol S. T., MacLachlan N. J., Rift Valley fever virus Journal of the American Veterinary Medical Association 2009 234 7 883 893
102. Fagbo S. F., The evolving transmission pattern of Rift Valley fever in the Arabian Peninsula Annals of the New York Academy of Sciences 2002 969 201 204 (Pubitemid 35305412)
103. Garcia S., Crance J. M., Billecocq A., Peinnequin A., Jouan A., Bouloy M., Garin D., Quantitative real-time PCR detection of Rift Valley fever virus and its application to evaluation of antiviral compounds Journal of Clinical Microbiology 2001 39 12 4456 4461 (Pubitemid 33117139)
104. Drosten C., Gttig S., Schilling S., Asper M., Panning M., Schmitz H., Gnther S., Rapid detection and quantification of RNA of Ebola and Marburg viruses, Lassa virus, Crimean-Congo hemorrhagic fever virus, Rift Valley fever virus, dengue virus, and yellow fever virus by real-time reverse transcription-PCR Journal of Clinical Microbiology 2002 40 7 2323 2330 (Pubitemid 34747327)
105. Sall A. A., Macondo E. A., Sne O. K., Diagne M., Sylla R., Mondo M., Girault L., Marrama L., Spiegel A., Diallo M., Bouloy M., Mathiot C., Use of reverse transcriptase PCR in early diagnosis of Rift Valley fever Clinical and Diagnostic Laboratory Immunology 2002 9 3 713 715 (Pubitemid 34538237)
106. Weidmann M., Sanchez-Seco M. P., Sall A. A., Ly P. O., Thiongane Y., L M. M., Schley H., Hufert F. T., Rapid detection of important human pathogenic Phleboviruses Journal of Clinical Virology 2008 41 2 138 142 (Pubitemid 351179447)
107. Peyrefitte C. N., Boubis L., Coudrier D., Bouloy M., Grandadam M., Tolou H. J., Plumet S., Real-time reverse-transcription loop-mediated isothermal amplification for rapid detection of Rift Valley fever virus Journal of Clinical Microbiology 2008 46 11 3653 3659
108. Le Roux C. A., Kubo T., Grobbelaar A. A., Van Vuren P. J., Weyer J., Nel L. H., Swanepoel R., Morita K., Paweska J. T., Development and evaluation of a real-time reverse transcription-loop- mediated isothermal amplification assay for rapid detection of rift valley fever virus in clinical specimens Journal of Clinical Microbiology 2009 47 3 645 651
109. Weiss K. E., Haig D. A., Alexander R. A., Wesselsbron virusa virus not previously describes, associated with abortion in domestic animals Onderstepoort Journal of Veterinary Research 1956 27 183 195
110. Fagbami A. H., Susceptibility of west African dwarf sheep to the indigenous Wesselsbron virus British Veterinary Journal 1980 136 1 57 62 (Pubitemid 10147806)
111. Barnard B. J., Voges S. F., Flaviviruses in South Africa: pathogenicity for sheep Onderstepoort Journal of Veterinary Research 1986 53 4 235 238
112. Baba S. S., Fagbami A. H., Ojeh C. K., Olaleye O. D., Omilabu S. A., Wesselsbron virus antibody in domestic animals in Nigeria: retrospective and prospective studies The New Microbiologica 1995 18 2 151 162
113. Diallo M., Nabeth P., Ba K., Sall A. A., Ba Y., Mondo M., Girault L., Abdalahi M. O., Mathiot C., Mosquito vectors of the 1998-1999 outbreak of Rift Valley Fever and other arboviruses (Bagaza, Sanar, Wesselsbron and West Nile) in Mauritania and Senegal Medical and Veterinary Entomology 2005 19 2 119 126 (Pubitemid 40772438)
114. Moureau G., Temmam S., Gonzalez J. P., Charrel R. N., Grard G., De Lamballerie X., A real-time RT-PCR method for the universal detection and identification of flaviviruses Vector-Borne and Zoonotic Diseases 2007 7 4 467 477
115. Castillo-Olivares J., Wood J., West Nile virus infection of horses Veterinary Research 2004 35 4 467 483 (Pubitemid 39161934)
116. Zeller H. G., Schuffenecker I., West Nile virus: An overview of its spread in Europe and the Mediterranean basin in contrast to its spread in the Americas European Journal of Clinical Microbiology and Infectious Diseases 2004 23 3 147 156 (Pubitemid 38471418)
117. Kramer L. D., Styer L. M., Ebel G. D., A global perspective on the epidemiology of West Nile virus Annual Review of Entomology 2008 53 61 81 (Pubitemid 351341931)
118. Murray K. O., Walker C., Gould E., The virology, epidemiology, and clinical impact of West nile virus: a decade of advancements in research since its introduction into the Western Hemisphere Epidemiology and Infection 2011 139 807 817
119. Higgs S., Snow K., Gould E. A., The potential for West Nile virus to establish outside of its narural range: a consideration of potential mosquito vectors in the United Kingdom Transactions of the Royal Society of Tropical Medicine and Hygiene 2004 98 2 82 87 (Pubitemid 38111555)
120. Shi P. Y., Kramer L. D., Molecular detection of West Nile virus RNA Expert Review of Molecular Diagnostics 2003 3 3 357 366 (Pubitemid 36612206)
121. Lanciotti R. S., Kerst A. J., Nasci R. S., Rapid detection of West Nile virus from human clinical specimens, field-collected moquitoes, and avian samples by a TaqMan reverse transcriptase-PCR assay Journal of Clinical Microbiology 2001 38 4066 4071 (Pubitemid 32233206)
122. Dyer J., Chisenhall D. M., Mores C. N., A multiplexed TaqMan assay for the detection of arthropod-borne flaviviruses Journal of Virological Methods 2007 145 1 9 13 (Pubitemid 47247887)
123. Naze F., Le Roux K., Schuffenecker I., Zeller H., Staikowsky F., Grivard P., Michault A., Laurent P., Simultaneous detection and quantitation of Chikungunya, Dengue and West Nile viruses by multiplex RT-PCR assays and Dengue virus typing using High Resolution Melting Journal of Virological Methods 2009 162 1-2 1 7
124. Zaayman D., Human S., Venter M., A highly sensitive method for the detection and genotyping of West Nile virus by real-time PCR Journal of Virological Methods 2009 157 2 155 160
125. Parida M., Posadas G., Inoue S., Hasebe F., Morita K., Real-time reverse transcription loop-mediated isothermal amplification for rapid detection of west nile virus Journal of Clinical Microbiology 2004 42 1 257 263 (Pubitemid 38082729)
126. Perera N., Aonuma H., Yoshimura A., Teramoto T., Iseki H., Nelson B., Igarashi I., Yagi T., Fukumoto S., Kanuka H., Rapid identification of virus-carrying mosquitoes using reverse transcription-loop-mediated isothermal amplification Journal of Virological Methods 2009 156 1-2 32 36
127. Penrith M. L., Vosloo W., Review of African swine fever: transmission, spread and control Journal of the South African Veterinary Association 2009 80 2 58 62
128. Lubisi B. A., Bastos A. D. S., Dwarka R. M., Vosloo W., Molecular epidemiology of African swine fever in East Africa Archives of Virology 2005 150 12 2439 2452 (Pubitemid 41642134)
129. Wilkinson P. J., Pegram R. G., Perry B. D., Lemche J., Schels H. F., The distribution of African swine fever virus isolated from Ornithodoros moubata in Zambia Epidemiology and Infection 1988 101 3 547 564 (Pubitemid 19034445)
130. Bech-Nielsen S., Fernandez J., Martinez-Pereda F., Espinosa J., Perez Bonilla Q., Sanchez-Vizcaino J. M., A case study of an outbreak of African swine fever in Spain British Veterinary Journal 1995 151 2 203 214
131. Ravaomanana J., Michaud V., Jori F., First detection of African swine fever virus in Ornithidorus porcinus in Madagascar and new insights into tick distribution and taxonomy Parasitology Vectors 2010 3 115
132. Rowlands R. J., Michaud V., Heath L., Hutchings G., Oura C., Vosloo W., Dwarka R., Onashvili T., Albina E., Dixon L. K., African swine fever virus isolate, Georgia, 2007 Emerging Infectious Diseases 2008 14 12 1870 1874
133. Rahimi P., Sohrabi A., Ashrafihelan J., Edalat R., Alamdari M., Masoudi M., Mostofi S., Azadmanesh K., Emergence of African swine fever virus, northwestern Iran Emerging Infectious Diseases 2010 16 12 1946 1948
134. Lubisi B. A., Dwarka R. M., Meenowa D., Jaumally R., An Investigation into the first outbreak of african swine fever in the republic of mauritius Transboundary and Emerging Diseases 2009 56 5 178 188
135. Labuda M., Nuttall P. A., Tick-borne viruses Parasitology 2004 129 S221 S245
136. King D. P., Reid S. M., Hutchings G. H., Grierson S. S., Wilkinson P. J., Dixon L. K., Bastos A. D. S., Drew T. W., Development of a TaqMan PCR assay with internal amplification control for the detection of African swine fever virus Journal of Virological Methods 2003 107 1 53 61 (Pubitemid 35373907)
137. McKillen J., Hjertner B., Millar A., McNeilly F., Belk S., Adair B., Allan G., Molecular beacon real-time PCR detection of swine viruses Journal of Virological Methods 2007 140 1-2 155 165 (Pubitemid 46185605)
138. McKillen J., McMenamy M., Hjertner B., Sensitive detection of African swine fever virus using real-time PCR with a 5' conjugated minor groove binder probe Journal of Virological Methods 2010 168 1-2 141 146
139. James H. E., Ebert K., McGonigle R., Reid S. M., Boonham N., Tomlinson J. A., Hutchings G. H., Denyer M., Oura C. A. L., Dukes J. P., King D. P., Detection of African swine fever virus by loop-mediated isothermal amplification Journal of Virological Methods 2010 164 1-2 68 74
140. Ronish B., Hakhverdyan M., Stahl K., Design and verification of a highly reliable Linear-After-The-Exponential PCR (LATE-PCR) assay for the detection of African swine fever Journal of Virological Methods 2011 172 8 15
141. Ergonul O., Crimean-Congo haemorrhagic fever Lancet Infectious Diseases 2006 6 4 203 214
142. Swanepoel R., Shepherd A. J., Leman P. A., Epidemiologic and clinical features of Crimean-Congo hemorrhagic fever in southern Africa American Journal of Tropical Medicine and Hygiene 1987 36 1 120 132 (Pubitemid 17033988)
143. Zavitsanou A., Babatsikou F., Koutis C., Crimean Congo hemorrhagic fever: an emerging tick-borne disease Health Science Journal 2009 3 1 10 18
144. Burney M. I., Ghafoor A., Saleen M., Nosocomial outbreak of viral hemorrhagic fever caused by Crimean hemorrhagic fever-Congo virus in Pakistan, January 1976 American Journal of Tropical Medicine and Hygiene 1980 29 5 941 947
145. Khan A. S., Maupin G. O., Rollin P. E., Noor A. M., Shurie H. H. M., Shalabi A. G. A., Wasef S., Haddad Y. M. A., Sadek R., Ijaz K., Peters C. J., Ksiazek T. G., An outbreak of Crimean-Congo hemorrhagic fever in the United Arab Emirates, 1994-1995 American Journal of Tropical Medicine and Hygiene 1997 57 5 519 525 (Pubitemid 27500453)
146. Gurbuz Y., Sencan I., Orturk B., Tutuncu E., A case of nosocomial transmission of Crimean-Congo hemorrhagic fever from patient to patient
147. Aradaib I. E., Erickson B. R., Mustafa M. E., Khristova M. L., Saeed N. S., Elageb R. M., Nichol S. T., Nosocomial outbreak of crimean-congo hemorrhagic fever, Sudan Emerging Infectious Diseases 2010 16 5 837 839
148. Naderi H. R., Sarvghad M. R., Bojdy A., Nosocomial outbreak of Crimean-Congo heamorrhagic fever Epidemiology and Infection 2010 139 862 866
149. Yilmaz G. R., Buzgan T., Irmak H., Safran A., Uzun R., Cevik M. A., Torunoglu M. A., The epidemiology of Crimean-Congo hemorrhagic fever in Turkey, 20022007 International Journal of Infectious Diseases 2009 13 3 380 386
150. El-Azazy O. M. E., Scrimgeour E. M., Crimean-Congo haemorrhagic fever virus infection in the Western Province of Saudi Arabia Transactions of the Royal Society of Tropical Medicine and Hygiene 1997 91 3 275 278 (Pubitemid 27261162)
151. Maltezou H. C., Papa A., Tsiodras S., Dalla V., Maltezos E., Antoniadis A., Crimean-Congo hemorrhagic fever in Greece: a public health perspective International Journal of Infectious Diseases 2009 13 6 713 716
152. Vorou R. M., Crimean-Congo hemorrhagic fever in southeastern Europe International Journal of Infectious Diseases 2009 13 6 659 662
153. Papa A., Dalla V., Papadimitriou E., Kartalis G. N., Antoniadis A., Emergence of Crimean-Congo haemorrhagic fever in Greece Clinical Microbiology and Infection 2010 16 7 843 847
154. Hoogstraal H., The epidemiology of tick-borne Crimean-Congo hemorrhagic fever in Asia, Europe, and Africa Journal of Medical Entomology 1979 15 4 307 417
155. Schwarz T. F., Nsanze H., Longson M., Nitschko H., Gilch S., Shurie H., Ameen A., Zahir A. R. M., Acharya U. G., Jager G., Polymerase chain reaction for diagnosis and identification of distinct variants of Crimean-Congo hemorrhagic fever virus in the United Arab Emirates American Journal of Tropical Medicine and Hygiene 1996 55 2 190 196 (Pubitemid 26299205)
156. Drosten C., Kummerer B. M., Schmitz H., Gunther S., Molecular diagnostics of viral haemorrhagic fevers Antiviral Research 2003 57 61 87 (Pubitemid 36254722)
157. Yapar M., Aydogan H., Pahsa A., Besirbellioglu B. A., Bodour H., Basustaoglu A. C., Guney C., Avci I. Y., Sener K., Setteh M. H. A., Kubar A., Rapid and quantitative detection of Crimean-Congo hemorrhagic fever virus by one-step real-time reverse transcriptase-PCR Japanese Journal of Infectious Diseases 2005 58 6 358 362 (Pubitemid 43078733)
158. Duh D., Saksida A., Petrovec M., Dedushaj I., Avi-Upanc T., Novel one-step real-time RT-PCR assay for rapid and specific diagnosis of Crimean-Congo hemorrhagic fever encountered in the Balkans Journal of Virological Methods 2006 133 2 175 179
159. Davies F. G., Nairobi sheep disease Parassitologia 1997 39 2 95 98 (Pubitemid 127513736)
160. Mugera G. M., Chema S., Nairobi sheep disease: a study of its pathogenesis in sheep, goats and suckling mice Bulletin of Epizootic Diseases of Africa 1967 15 4 337 354
161. Marczinke B. I., Nichol S. T., Nairobi sheep disease virus, an important tick-borne pathogen of sheep and goats in Africa, is also present in Asia Virology 2002 303 1 146 151 (Pubitemid 36027173)
162. Sudeep A. B., Jadi R. S., Mishra A. C., Ganjam virus Indian Journal of Medical Research 2009 130 5 514 519
163. Montgomery R. E., On a tick borne gastro-enteritis of sheep and goats occurring in East Africa Journal of Comparative Pathology 1917 30 28 57
164. Davies F. G., Nairobi sheep disease in Kenya. The isolation of virus from sheep and goats, ticks and possible maintenance hosts Journal of Hygiene 1978 81 2 259 265 (Pubitemid 9021090)
165. Terpstra C., Coetzer J. A. W., Thompson G. R., Tustin R. C., Nairobi sheep disease Infectious Diseases of Livestock with Special Reference to Southern Africa 1993 Cape Town, South Africa Oxford University Press 718 722
166. Honig J. E., Osborne J. C., Nichol S. T., The high genetic variation of viruses of the genus Nairovirus reflects the diversity of their predominant tick hosts Virology 2004 318 1 10 16 (Pubitemid 38234255)
167. Sang R., Onyango C., Gachoya J., Mabinda E., Konongoi S., Ofula V., Dunster L., Okoth F., Coldren R., Tesh R., Da Rosa A. T., Finkbeiner S., Wang D., Crabtree M., Miller B., Tickborne arbovirus surveillance in market livestock, Nairobi, Kenya Emerging Infectious Diseases 2006 12 7 1074 1080 (Pubitemid 44061275)
168. Jss J., Tick-borne encephalitis in Europe and beyondthe epidemiological situation as of 2007 Eurosurveillance 2008 13 18916
169. Gritsun T. S., Lashkevich V. A., Gould E. A., Tick-borne encephalitis Antiviral Research 2003 57 1-2 129 146 (Pubitemid 36254727)
170. MacKenzie C. P., Lewis N. D., Smith S. T., Muir R. W., Louping-ill in a working collie Veterinary Record 1973 92 14 354 356
171. Reid H. W., Barlow R. M., Boyce J. B., Isolation of louping-ill virus from a roe deer (Caperolus cepreolus) Veterinary Record 1976 98 116
172. Reid H. W., Barlow R. M., Pow I., Isolation of louping-ill virus from red deer (Cervus elaphus) Veterinary Record 1978 102 21 463 464
173. Macaldowie C., Patterson I. A. P., Nettleton P. F., Low H., Buxton D., Louping ill in llamas (Lama glama) in the Hebrides Veterinary Record 2005 156 13 420 421 (Pubitemid 40520843)
174. Marin M. S., McKenzie J., Gao G. F., Reid H. W., Antoniadis A., Gould E. A., The virus causing encephalomyelitis in sheep in Spain: a new member of the tick-borne encephalitis group Research in Veterinary Science 1995 58 1 11 13
175. Mansfield K. L., Johnson N., Phipps L. P., Stephenson J. R., Fooks A. R., Solomon T., Tick-borne encephalitis virusa review of an emerging zoonosis Journal of General Virology 2009 90 8 1781 1794
176. McGuire K., Holmes E. C., Gao G. F., Reid H. W., Gould E. A., Tracing the origins of louping ill virus by molecular phylogenetic analysis Journal of General Virology 1998 79 5 981 988 (Pubitemid 28203838)
177. Gonzalez L., Reid H. W., Pow I., Gilmour J. S., A disease resembling louping-ill in sheep in the Basque region of Spain Veterinary Record 1987 121 1 12 13
178. Papadopoulos O., Paschaleri-Papadopoulou E., Deligaris N., Doukas G., Isolation of tick-borne encephalitis virus from a flock of goats with abortions and fatal disease (preliminary report) Veterinary News Greece 1971 3 112 114
179. Pavlidou V., Gerou S., Diza E., Antoniadis A., Papa A., Genetic study of the distribution of greek goat encephalitis virus in Greece Vector-Borne and Zoonotic Diseases 2008 8 3 351 354 (Pubitemid 351860465)
180. Hartley W. J., Martin W. B., Hakiolu F., Chifney S. T. E., A viral encephalitis of sheep in Turkey Pendik Institute Journal 1969 2 89 100
181. Gao G. F., Jiang W. R., Hussain M. H., Sequencing and antigenic studies of a Norwegian virus isolated from encephalomyelitic sheep confirm the existence of louping ill virus outside Great Britain and Ireland Journal of General Virology 1993 74 1 109 114 (Pubitemid 23053773)
182. Whitby J. E., Whitby S. N., Jennings A. D., Stephenson J. R., Barrett A. D. T., Nucleotide sequence of the envelope protein of a Turkish isolate of tick-borne encephalitis (TBE) virus is distinct from other viruses of the TBE virus complex Journal of General Virology 1993 74 5 921 924 (Pubitemid 23154297)
183. Hudson P., Gould E., Laurenson K., Gaunt M., Reid H., Jones L., Norman R., MacGuire K., Newborn D., The epidemiology of louping-ill, a tick borne infection of red grouse (Lagopus lagopus scoticus) Parassitologia 1997 39 4 319 323 (Pubitemid 127515144)
184. Gaunt M. W., Jones L. D., Laurenson K., Hudson P. J., Reid H. W., Gould E. A., Definitive identification of louping ill virus by RT-PCR and sequencing in field populations of Ixodes ricinus on the Lochindorb estate Archives of Virology 1997 142 6 1181 1191 (Pubitemid 27266509)
185. Marriott L., Willoughby K., Chianini F., Dagleish M. P., Scholes S., Robinson A. C., Gould E. A., Nettleton P. F., Detection of Louping ill virus in clinical specimens from mammals and birds using TaqMan RT-PCR Journal of Virological Methods 2006 137 1 21 28 (Pubitemid 44219017)
186. Johnson N., Wakeley P. R., Mansfield K. L., McCracken F., Haxton B., Phipps L. P., Fooks A. R., Assessment of a novel real-time pan-flavivirus RT-polymerase chain reaction Vector-Borne and Zoonotic Diseases 2010 10 7 665 671
187. Achazi K., Nitsche A., Patel P., Radoni A., Mantke O. D., Niedrig M., Detection and differentiation of tick-borne encephalitis virus subtypes by a reverse transcription quantitative real-time PCR and pyrosequencing Journal of Virological Methods 2011 171 1 34 39
188. Palacios G., Cowled C., Bussetti A. V., Rapid molecular strategy for orbivirus detection and characterization Journal of Clinical Microbiology 2011 49 2314 2317
189. Palacios G., Quan P. L., Jabado O. J., Conlan S., Hirschberg D. L., Liu Y., Zhai J., Renwick N., Hui J., Hegyi H., Grolla A., Strong J. E., Towner J. S., Geisbert T. W., Jahrling P. B., Bchen-Osmond C., Ellerbrok H., Sanchez-Seco M. P., Lussier Y., Formenty P., Nichol S. T., Feldmann H., Briese T., Lipkin W. I., Panmicrobial oligonucleotide array for diagnosis of infectious diseases Emerging Infectious Diseases 2007 13 1 73 81 (Pubitemid 46057840)
190. Wright C. F., Morelli M. J., Thébaud G., Beyond the consensus: dissecting within-host viral population diversity of foot-and-mouth disease virus by using next-generation genome sequencing Journal of Virology 2011 85 2266 2275