메뉴 건너뛰기




Volumn 51, Issue 12, 2011, Pages 3226-3234

Computational studies of bacterial resistance to β-lactam antibiotics: Mechanism of covalent inhibition of the penicillin-binding protein 2a (PBP2a)

Author keywords

[No Author keywords available]

Indexed keywords

ACYLATION; ANTIBIOTICS; BACTERIA; BIOCHEMISTRY; CELL MEMBRANES; DISEASES; HEALTH RISKS; MOLECULAR MODELING; QUANTUM CHEMISTRY; QUANTUM THEORY;

EID: 84555220570     PISSN: 15499596     EISSN: 1549960X     Source Type: Journal    
DOI: 10.1021/ci2004175     Document Type: Article
Times cited : (10)

References (35)
  • 3
    • 84965362242 scopus 로고
    • "celbenin" - Resistant Staphylococci
    • Jevons, M. P. "Celbenin"-Resistant Staphylococci Br. Med. J. 1961, 1, 124-125
    • (1961) Br. Med. J. , vol.1 , pp. 124-125
    • Jevons, M.P.1
  • 4
    • 14844362964 scopus 로고    scopus 로고
    • Bacterial Resistance to β-Lactam Antibiotics Compelling Opportunism, Compelling Opportunity
    • Fisher, J. F.; Meroueh, S. O.; Mobashery, S. Bacterial Resistance to β-Lactam Antibiotics Compelling Opportunism, Compelling Opportunity Chem. Rev. 2005, 105, 395-424
    • (2005) Chem. Rev. , vol.105 , pp. 395-424
    • Fisher, J.F.1    Meroueh, S.O.2    Mobashery, S.3
  • 5
    • 24344466955 scopus 로고    scopus 로고
    • β-Lactams Against Methicillin-Resistant Staphylococcus aureus
    • Guignard, B.; Entenza, J. M.; Moreillon, P. β-Lactams Against Methicillin-Resistant Staphylococcus aureus Curr. Opin. Microbiol. 2005, 5, 479-489
    • (2005) Curr. Opin. Microbiol. , vol.5 , pp. 479-489
    • Guignard, B.1    Entenza, J.M.2    Moreillon, P.3
  • 6
    • 25144512582 scopus 로고    scopus 로고
    • β-Lactam Antibiotic Resistance: A Current Structural Perspective
    • Wilke, M. S.; Lovering, A. L.; Strynadka, N. C. J. β-Lactam Antibiotic Resistance: A Current Structural Perspective Curr. Opin. Microbiol. 2005, 8, 525-533
    • (2005) Curr. Opin. Microbiol. , vol.8 , pp. 525-533
    • Wilke, M.S.1    Lovering, A.L.2    Strynadka, N.C.J.3
  • 7
    • 0033580616 scopus 로고    scopus 로고
    • Penicillin-Binding Protein 2a from Methicillin-Resistant Staphylococcus aureus: Kinetic Characterization of Its Interactions with β-Lactams Using Electrospray Mass Spectrometry
    • Lu, W. P.; Sun, Y.; Bauer, M. D.; Paule, S.; Koenigs, P. M.; Kraft, W. G. Penicillin-Binding Protein 2a from Methicillin-Resistant Staphylococcus aureus: Kinetic Characterization of Its Interactions with β-Lactams Using Electrospray Mass Spectrometry Biochemistry 1999, 38, 6537-6546
    • (1999) Biochemistry , vol.38 , pp. 6537-6546
    • Lu, W.P.1    Sun, Y.2    Bauer, M.D.3    Paule, S.4    Koenigs, P.M.5    Kraft, W.G.6
  • 8
    • 0035859931 scopus 로고    scopus 로고
    • The Evolution of Methicillin Resistance in Staphylococcus aureus: Similarity of Genetic Backgrounds in Historically Early Methicillin-Susceptible and Resistant Isolates and Contemporary Epidemic Clones
    • Crisostomo, M. I.; Westh, H.; Tomasz, A.; Chung, M.; Oliveira, D. C.; de Lencastre, H. The Evolution of Methicillin Resistance in Staphylococcus aureus: Similarity of Genetic Backgrounds in Historically Early Methicillin-Susceptible and Resistant Isolates and Contemporary Epidemic Clones Proc. Natl. Acad. Sci. U.S.A. 2001, 98, 9865-9870
    • (2001) Proc. Natl. Acad. Sci. U.S.A. , vol.98 , pp. 9865-9870
    • Crisostomo, M.I.1    Westh, H.2    Tomasz, A.3    Chung, M.4    Oliveira, D.C.5    De Lencastre, H.6
  • 9
    • 0035845487 scopus 로고    scopus 로고
    • An Acquired and A Native Penicillin-Binding Protein Cooperate in Building the Cell Wall of Drug-Resistant Staphylococci
    • Pinho, M. G.; de Lencastre, H.; Tomasz, A. An Acquired and A Native Penicillin-Binding Protein Cooperate in Building the Cell Wall of Drug-Resistant Staphylococci Proc. Natl. Acad. Sci. U. S. A. 2001, 98, 10886-10891
    • (2001) Proc. Natl. Acad. Sci. U. S. A. , vol.98 , pp. 10886-10891
    • Pinho, M.G.1    De Lencastre, H.2    Tomasz, A.3
  • 10
    • 0035477673 scopus 로고    scopus 로고
    • The Emergence and Evolution of Methicillin-Resistant Staphylococcus aureus
    • Hiramatsu, K.; Cui, L.; Kuroda, M.; Ito, T. The Emergence and Evolution of Methicillin-Resistant Staphylococcus aureus Trends Microbiol. 2001, 9, 486-493
    • (2001) Trends Microbiol. , vol.9 , pp. 486-493
    • Hiramatsu, K.1    Cui, L.2    Kuroda, M.3    Ito, T.4
  • 11
    • 4644366894 scopus 로고    scopus 로고
    • The Basis for Resistance to β-Lactam Antibiotics by Penicillin-binding Protein 2a of Methicillin-resistant Staphylococcus aureus
    • Fuda, C.; Suvorov, M.; Vakulenko, S. B.; Mobashery, S. The Basis for Resistance to β-Lactam Antibiotics by Penicillin-binding Protein 2a of Methicillin-resistant Staphylococcus aureus J. Biol. Chem. 2004, 279, 40802-40806
    • (2004) J. Biol. Chem. , vol.279 , pp. 40802-40806
    • Fuda, C.1    Suvorov, M.2    Vakulenko, S.B.3    Mobashery, S.4
  • 12
    • 33744504974 scopus 로고    scopus 로고
    • Mechanistic Basis for the Action of New Cephalosporin Antibiotics Effective Against Methicillin- and Vancomycin-resistant Staphylococcus aureus
    • Fuda, C.; Hesek, D.; Lee, M.; Heilmayer, W.; Novak, R.; Vakulenko, S. B.; Mobashery, S. Mechanistic Basis for the Action of New Cephalosporin Antibiotics Effective Against Methicillin- and Vancomycin-resistant Staphylococcus aureus J. Biol. Chem. 2006, 281, 10035-10041
    • (2006) J. Biol. Chem. , vol.281 , pp. 10035-10041
    • Fuda, C.1    Hesek, D.2    Lee, M.3    Heilmayer, W.4    Novak, R.5    Vakulenko, S.B.6    Mobashery, S.7
  • 13
    • 0036829003 scopus 로고    scopus 로고
    • Structural Basis for the β-Lactam Resistance of PBP2a from Methicillin-Resistant Staphylococcus aureus
    • Lim, D.; Strynadka, N. C. J. Structural Basis for the β-Lactam Resistance of PBP2a from Methicillin-Resistant Staphylococcus aureus Nat. Struct. Biol. 2002, 9, 870-876
    • (2002) Nat. Struct. Biol. , vol.9 , pp. 870-876
    • Lim, D.1    Strynadka, N.C.J.2
  • 14
    • 0032526053 scopus 로고    scopus 로고
    • Reaction of Soluble Penicillin-Binding Protein 2a of Methicillin- Resistant Staphylococcus aureus with β-Lactams and Acyclic Substrates: Kinetics in Homogeneous Solution
    • Graves-Woodward, K.; Pratt, R. F. Reaction of Soluble Penicillin-Binding Protein 2a of Methicillin-Resistant Staphylococcus aureus with β-Lactams and Acyclic Substrates: Kinetics in Homogeneous Solution Biochem. J. 1998, 332, 755-761
    • (1998) Biochem. J. , vol.332 , pp. 755-761
    • Graves-Woodward, K.1    Pratt, R.F.2
  • 15
    • 0034093176 scopus 로고    scopus 로고
    • Identification and Characterization of the Penicillin-Binding Protein 2a of Streptococcus pneumoniae and Its Possible Role in Resistance to β-Lactam Antibiotics
    • Zhao, G.; Meier, T. I.; Hoskins, J.; McAllister, K. A. Identification and Characterization of the Penicillin-Binding Protein 2a of Streptococcus pneumoniae and Its Possible Role in Resistance to β-Lactam Antibiotics Antimicrob. Agents Chemother. 2000, 44, 1745-1748
    • (2000) Antimicrob. Agents Chemother. , vol.44 , pp. 1745-1748
    • Zhao, G.1    Meier, T.I.2    Hoskins, J.3    McAllister, K.A.4
  • 18
    • 28644432877 scopus 로고    scopus 로고
    • Very Fast Empirical Prediction and Rationalization of Protein pKa Values
    • Li, H.; Robertson, A. D.; Jensen, J. H. Very Fast Empirical Prediction and Rationalization of Protein pKa Values Proteins 2005, 61, 704-721
    • (2005) Proteins , vol.61 , pp. 704-721
    • Li, H.1    Robertson, A.D.2    Jensen, J.H.3
  • 21
    • 33748538349 scopus 로고    scopus 로고
    • Automatic Atom Type and Bond Type Perception in Molecular Mechanical Calculations
    • Wang, J.; Wang, W.; Kollman, P. A.; Case, D. A. Automatic Atom Type and Bond Type Perception in Molecular Mechanical Calculations J. Mol. Graphics Modell. 2006, 25, 247-260
    • (2006) J. Mol. Graphics Modell. , vol.25 , pp. 247-260
    • Wang, J.1    Wang, W.2    Kollman, P.A.3    Case, D.A.4
  • 22
    • 0000189651 scopus 로고
    • Density-Functional Thermochemistry. III the Role of Exact Exchange
    • Becke, A. D. Density-Functional Thermochemistry. III. The Role of Exact Exchange J. Chem. Phys. 1993, 98, 5648-5652
    • (1993) J. Chem. Phys. , vol.98 , pp. 5648-5652
    • Becke, A.D.1
  • 23
    • 0345491105 scopus 로고
    • Development of the Colle-Salvetti Correlation-Energy Formula into a Functional of the Electron Density
    • Lee, C.; Yang, W.; Parr, R. G. Development of the Colle-Salvetti Correlation-Energy Formula into a Functional of the Electron Density Phys. Rev. B 1988, 37, 785-789
    • (1988) Phys. Rev. B , vol.37 , pp. 785-789
    • Lee, C.1    Yang, W.2    Parr, R.G.3
  • 24
    • 0000216001 scopus 로고
    • Accurate Spin-Dependent Electron Liquid Correlation Energies for Local Spin Density Calculations: A Critical Analysis
    • Vosko, S. H.; Wilk, L.; Nusair, M. Accurate Spin-Dependent Electron Liquid Correlation Energies for Local Spin Density Calculations: a Critical Analysis Can. J. Phys. 1980, 58, 1200-1211
    • (1980) Can. J. Phys. , vol.58 , pp. 1200-1211
    • Vosko, S.H.1    Wilk, L.2    Nusair, M.3
  • 27
    • 84986527758 scopus 로고
    • IMOMM: A New Integrated Ab Initio + Molecular Mechanics Geometry Optimization Scheme of Equilibrium Structures and Transition States
    • Maseras, F.; Morokuma, K. IMOMM: A New Integrated Ab Initio + Molecular Mechanics Geometry Optimization Scheme of Equilibrium Structures and Transition States J. Comput. Chem. 1995, 16, 1170-1179
    • (1995) J. Comput. Chem. , vol.16 , pp. 1170-1179
    • Maseras, F.1    Morokuma, K.2
  • 29
    • 58149290224 scopus 로고    scopus 로고
    • Hybrid Methods: ONIOM(QM:MM) and QM/MM
    • In; Spellmeyer, D. C. Elsevier: Amsterdam, The Netherlands, Vol. Chapter 3
    • Vreven, T.; Morokuma, K. Hybrid Methods: ONIOM(QM:MM) and QM/MM. In Annual Reports in Computational Chemistry; Spellmeyer, D. C., Ed.; Elsevier: Amsterdam, The Netherlands, 2006; Vol. 2, Chapter 3.
    • (2006) Annual Reports in Computational Chemistry , vol.2
    • Vreven, T.1    Morokuma, K.2
  • 31
    • 0042125389 scopus 로고    scopus 로고
    • Identification of Glu166 as the General Base in the Acylation Reaction of Class A β-Lactamases through QM/MM Modeling
    • Hermann, J. C.; Ridder, L.; Mulholland, A. J.; Holtje, H. D. Identification of Glu166 as the General Base in the Acylation Reaction of Class A β-Lactamases through QM/MM Modeling J. Am. Chem. Soc. 2003, 125, 9590-9591
    • (2003) J. Am. Chem. Soc. , vol.125 , pp. 9590-9591
    • Hermann, J.C.1    Ridder, L.2    Mulholland, A.J.3    Holtje, H.D.4
  • 32
    • 16244412269 scopus 로고    scopus 로고
    • Mechanisms of Antibiotic Resistance: QM/MM Modeling of the Acylation Reaction of a Class A β-Lactamase with Benzylpenicillin
    • Hermann, J. C.; Hensen, C.; Ridder, L.; Mulholland, A. J.; Holtje, H. D. Mechanisms of Antibiotic Resistance: QM/MM Modeling of the Acylation Reaction of a Class A β-Lactamase with Benzylpenicillin J. Am. Chem. Soc. 2005, 127, 4454-4465
    • (2005) J. Am. Chem. Soc. , vol.127 , pp. 4454-4465
    • Hermann, J.C.1    Hensen, C.2    Ridder, L.3    Mulholland, A.J.4    Holtje, H.D.5
  • 33
    • 33645699595 scopus 로고    scopus 로고
    • Molecular Mechanisms of Antibiotic Resistance: QM/MM Modelling of Deacylation in a Class A β-Lactamase
    • Hermann, J. C.; Ridder, L.; Hotje, H. D.; Mulholland, A. J. Molecular Mechanisms of Antibiotic Resistance: QM/MM Modelling of Deacylation in a Class A β-Lactamase Org. Biomol. Chem. 2006, 4, 206-210
    • (2006) Org. Biomol. Chem. , vol.4 , pp. 206-210
    • Hermann, J.C.1    Ridder, L.2    Hotje, H.D.3    Mulholland, A.J.4
  • 34
    • 70350398133 scopus 로고    scopus 로고
    • High Level QM/MM Modeling of the Formation of the Tetrahedral Intermediate in the Acylation of Wild Type and K73A Mutant TEM-1 Class A β-Lactamase
    • Hermann, J. C.; Pradon, J.; Harvey, J. N.; Mulholland, A. J. High Level QM/MM Modeling of the Formation of the Tetrahedral Intermediate in the Acylation of Wild Type and K73A Mutant TEM-1 Class A β-Lactamase J. Phys. Chem. A 2009, 113, 11984-11994
    • (2009) J. Phys. Chem. A , vol.113 , pp. 11984-11994
    • Hermann, J.C.1    Pradon, J.2    Harvey, J.N.3    Mulholland, A.J.4
  • 35
    • 27644522933 scopus 로고    scopus 로고
    • Ab Initio QM/MM Study of Class A β-Lactamase Acylation: Dual Participation of Glu166 and Lys73 in a Concerted Base Promotion of Ser70
    • Meroueh, S. O.; Fisher, J. F.; Schlegel, H. B.; Mobashery, S. Ab Initio QM/MM Study of Class A β-Lactamase Acylation: Dual Participation of Glu166 and Lys73 in a Concerted Base Promotion of Ser70 J. Am. Chem. Soc. 2005, 127, 15397-15407
    • (2005) J. Am. Chem. Soc. , vol.127 , pp. 15397-15407
    • Meroueh, S.O.1    Fisher, J.F.2    Schlegel, H.B.3    Mobashery, S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.