Binding kinetics of grouper nervous necrosis viruses with functionalized antimicrobial peptides by nanomechanical detection

Biosensors and Bioelectronics

Volumn 31, Issue 1, 2012, Pages 116-123

  Kuan, Shu ^a   Chi, Shau Chi ^b   Cheng, Yung Jen ^a   Chia, Ta Jui ^b   Huang, Long Sun ^a  

^a NATIONAL TAIWAN UNIVERSITY   (Taiwan)

^b NATIONAL TAIWAN UNIVERSITY   (Taiwan)

Author keywords

Antimicrobial peptides (AMPs); Biosensor; Microcantilever (MCL); Nervous necrosis virus (NNV)

Indexed keywords

ANTI-MICROBIAL ACTIVITY; ANTIMICROBIAL PEPTIDE; BINDING ACTIVITIES; BINDING AFFINITIES; BINDING KINETICS; BINDING STRENGTH; BIOSENSING TECHNIQUE; FISH SPECIES; FUNCTIONALIZED; INNATE IMMUNITY; KINETIC RATE CONSTANTS; LOW TOXICITY; MASS MORTALITY; MICRO-CANTILEVERS; MICROCANTILEVER (MCL); NERVOUS NECROSIS VIRUS (NNV); PHOSPHATE GROUP; RING STRUCTURES; SENSING SURFACE; SURFACE STRESS;

BINDING ENERGY; BIOSENSORS; COMPOSITE MICROMECHANICS; KINETICS; MOLECULAR RECOGNITION; PEPTIDES; RATE CONSTANTS; VIRUSES; X RAY PHOTOELECTRON SPECTROSCOPY;

COMPUTER VIRUSES;

HEPCIDIN 1-5; NITROGEN; PHOSPHATE; POLYPEPTIDE ANTIBIOTIC AGENT; SHRIMP ANTILIPOPOLYSACCHARIDE FACTOR; UNCLASSIFIED DRUG;

ARTICLE; BINDING AFFINITY; BINDING KINETICS; BIOSENSOR; CONFORMATIONAL TRANSITION; CONTROLLED STUDY; DISSOCIATION CONSTANT; GROUPER NERVOUS NECROSIS VIRUS; MICROCANTILEVER BIOSENSOR; MOLECULAR INTERACTION; MOLECULAR RECOGNITION; NANOMECHANICAL DETECTION; NANOTECHNOLOGY; NODAVIRUS; NONHUMAN; SURFACE PROPERTY; VALIDATION PROCESS; VIRUS DETECTION; X RAY PHOTOELECTRON SPECTROSCOPY;

ANIMALS; ANTIMICROBIAL CATIONIC PEPTIDES; BASS; BIOSENSING TECHNIQUES; EQUIPMENT DESIGN; EQUIPMENT FAILURE ANALYSIS; FISH DISEASES; MICRO-ELECTRICAL-MECHANICAL SYSTEMS; NODAVIRIDAE; PROTEIN BINDING; PROTEIN INTERACTION MAPPING; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; VIRAL TROPISM; VIROLOGY; VIRUS DISEASES;

ATLANTIC HALIBUT NODAVIRUS; EPINEPHELINAE; REDSPOTTED GROUPER NERVOUS NECROSIS VIRUS; STRIPED JACK NERVOUS NECROSIS VIRUS;

EID: 84455202477     PISSN: 09565663     EISSN: 18734235     Source Type: Journal    
DOI: 10.1016/j.bios.2011.10.003     Document Type: Article

References (43)

1. Arlett J.L., Myers E.B., Roukes M.L. Nat. Nanotechnol. 2011, 6(4):203-215.
2. Backmann N., Zahnd C., Huber F., Bietsch A., Pluckthun A., Lang H.P., Guntherodt H.J., Hegner M., Gerber C. Proc. Natl. Acad. Sci. U.S.A. 2005, 102(41):14587-14592.
3. Berger R., Delamarche E., Lang H.P., Gerber C., Gimzewski J.K., Meyer E., Guntherodt H.J. Science 1997, 276(5321):2021-2024.
4. Braun T., Ghatkesar M.K., Backmann N., Grange W., Boulanger P., Letellier L., Lang H.P., Bietsch A., Gerber C., Hegner M. Nat. Nanotechnol. 2009, 4(3):179-185.
5. Chi S.C., Hu W.W., Lo B.J. J. Fish Dis. 1999, 22(3):173-182.
6. Chi S.C., Lo B.J., Lin S.C. J. Fish Dis. 2001, 24(1):3-13.
7. Chia T.J., Wu Y.C., Chen J.Y., Chi S.C. Fish Shellfish Immunol. 2010, 28(3):434-439.
8. Dhayal B., Henne W.A., Doorneweerd D.D., Reifenberger R.G., Low P.S. J. Am. Chem. Soc. 2006, 128(11):3716-3721.
9. Dugan A.S., Maginnis M.S., Jordan J.A., Gasparovic M.L., Manley K., Page R., Williams G., Porter E., O'Hara B.A., Atwood W.J. J. Biol. Chem. 2008, 283(45):31125-31132.
10. Furci L., Sironi F., Tolazzi M., Vassena L., Lusso P. Blood 2007, 109(7):2928-2935.
11. Fritz J. Analyst 2008, 133(7):855-863.
12. Godin M., Williams P.J., Tabard-Cossa V., Laroche O., Beaulieu L.Y., Lennox R.B., Grutter P. Langmuir 2004, 20(17):7090-7096.
13. Godin M., Tabard-Cossa V., Miyahara Y., Monga T., Williams P.J., Beaulieu L.Y., Lennox R.B., Grutter P. Nanotechnology 2010, 21(7).
14. Graf N., Yegen E., Gross T., Lippitz A., Weigel W., Krakert S., Terfort A., Unger W.E.S. Surf. Sci. 2009, 603(18):2849-2860.
15. Gruber K., Horlacher T., Castelli R., Mader A., Seeberger P.H., Hermann B.A. ACS Nano 2011, 5(5):3670-3678.
16. Gunter R.L., Delinger W.G., Manygoats K., Kooser A., Porter T.L. Sens. Actuator A: Phys. 2003, 107(3):219-224.
17. Gupta A.K., Nair P.R., Akin D., Ladisch M.R., Broyles S., Alam M.A., Bashir R. Proc. Natl. Acad. Sci. U.S.A. 2006, 103(36):13362-13367.
18. Hartshorn K.L., White M.R., Tecle T., Holmskov U., Crouch E.C. J. Immunol. 2006, 176(11):6962-6972.
19. Huang P.H., Chen J.Y., Kuo C.M. Mol. Immunol. 2007, 44(8):1922-1934.
20. Huber F., Hegner M., Gerber C., Guntherodt H.J., Lang H.P. Biosens. Bioelectron. 2006, 21(8):1599-1605.
21. Ibach H. Physics of Surfaces and Interfaces 2006, Springer.
22. Ilic B., Yang Y., Craighead H.G. Appl. Phys. Lett. 2004, 85(13):2604-2606.
23. Iucci G., Battocchio C., Dettin M., Gambaretto R., Di Bello C., Borgatti F., Carravetta V., Monti S., Polzonetti G. Surf. Sci. 2007, 601(18):3843-3849.
24. Johnsson B., Lofas S., Lindquist G. Anal. Biochem. 1991, 198(2):268-277.
25. Johnson S., Evans D., Laurenson S., Paul D., Davies A.G., Ferrigno P.K., Walti C. Anal. Chem. 2008, 80(4):978-983.
26. Kreuter A., Skrygan M., Gambichler T., Brockmeyer N.H., Stucker M., Herzler C., Potthoff A., Altmeyer P., Pfister H., Wieland U. Br. J. Dermatol. 2009, 160(6):1197-1205.
27. Kulkarni S.K., Ethiraj A.S., Kharrazi S., Deobagkar D.N., Deobagkar D.D. Biosens. Bioelectron. 2005, 21(1):95-102.
28. Lee C.Y., Gong P., Harbers G.M., Grainger D.W., Castner D.G., Gamble L.J. Anal. Chem. 2006, 78(10):3316-3325.
29. Liu Y., Yu X., Zhao R., Shangguan D.H., Bo Z.Y., Liu G.Q. Biosens. Bioelectron. 2003, 18(11):1419-1427.
30. Milkani E., Lambert C.R., McGimpsey W.G. Anal. Biochem. 2011, 408(2):212-219.
31. Moulder J.F., Chastain J., King R.C. Handbook of X-ray Photoelectron Spectroscopy: A Reference Book of Standard Spectra for Identification and Interpretation of XPS Data 1995, Physical Electronics, Inc., Eden Prairie, MN, pp. 14-15, 58-61.
32. Mukhopadhyay R., Sumbayev V.V., Lorentzen M., Kjems J., Andreasen P.A., Besenbacher F. Nano Lett. 2005, 5(12):2385-2388.
33. Ndieyira J.W., Watari M., Barrera A.D., Zhou D., Vogtli M., Batchelor M., Cooper M.A., Strunz T., Horton M.A., Abell C., Rayment T., Aeppli G., McKendry R.A. Nat. Nanotechnol. 2008, 69:1-696.
34. Oyston P.C.F., Fox M.A., Richards S.J., Clark G.C. J. Med. Microbiol. 2009, 58(8):977-987.
35. Pan C.Y., Chao T.T., Chen J.C., Chen J.Y., Liu W.C., Lin C.H., Kuo C.M. Int. Immunopharmacol. 2007, 7(5):687-700.
36. Shieh J.R., Chi S.C. Dis. Aquat. Org. 2005, 63(1):53-60.
37. Shu W.M., Laurenson S., Knowles T.P.J., Ferrigno P.K., Seshia A.A. Biosens. Bioelectron. 2008, 24(2):233-237.
38. Squires T.M., Messinger R.J., Manalis S.R. Nat. Biotechnol. 2008, 26(4):417-426.
39. Wang G.S., Li X., Wang Z. Nucleic Acids Res. 2009, 37:D933-D937.
40. Yang Y.W., Fan L.J. Langmuir 2002, 18(4):1157-1164.
41. Yen Y.K., Huang C.Y., Chen C.H., Hung C.M., Wu K.C., Lee C.K., Chang J.S., Lin S.M., Huang L.S. Sens. Actuator B: Chem. 2009, 141(2):498-505.
42. Zhang Q.D., Huang Y.Y., Zhao R., Liu G.Q., Chen Y. Biosens. Bioelectron. 2008, 24(1):48-54.
43. Zhang Y.F., Venkatachalan S.P., Xu H., Xu X.H., Joshi P., Ji H.F., Schulte M. Biosens. Bioelectron. 2004, 19(11):1473-1478.