PAT1, a new member of the GRAS family, is involved in phytochrome A signal transduction

Genes and Development

Volumn 14, Issue 10, 2000, Pages 1269-1278

  Bolle, Cordelia ^a   Koncz, Csaba ^b   Chua, Nam Hai ^a  

^a ROCKEFELLER UNIVERSITY   (United States)

^b MAX PLANCK INSTITUTE FOR PLANT BREEDING RESEARCH   (Germany)

Author keywords

Arabidopsis; Far red; GRAS proteins; Phytochrome A; Signal transduction

Indexed keywords

PHYTOCHROME; PHYTOCHROME A SIGNAL TRANSDUCTION PROTEIN 1; REGULATOR PROTEIN; UNCLASSIFIED DRUG;

ARABIDOPSIS; ARTICLE; GENE MUTATION; GENE OVEREXPRESSION; GENETIC COMPLEMENTATION; LIGHT; MULTIGENE FAMILY; MUTANT; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PHOTORECEPTOR; PLANT; PLANT GROWTH; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; SIGNAL TRANSDUCTION; STOP CODON;

AMINO ACID MOTIFS; AMINO ACID SEQUENCE; ARABIDOPSIS; ARABIDOPSIS PROTEINS; CLONING, MOLECULAR; COLOR; CYTOPLASM; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, PLANT; GENES, DOMINANT; GENES, PLANT; GENETIC COMPLEMENTATION TEST; GERMINATION; HYPOCOTYL; LIGHT; MOLECULAR SEQUENCE DATA; MUTATION; PHENOTYPE; PHYTOCHROME; PHYTOCHROME A; PLANT PROTEINS; PLANTS, GENETICALLY MODIFIED; RNA, PLANT; SEQUENCE HOMOLOGY, AMINO ACID; SIGNAL TRANSDUCTION; SUBSTRATE SPECIFICITY;

ARABIDOPSIS;

EID: 0034657338     PISSN: 08909369     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (42)

1. Altschul, S.F., W. Gish, W. Miller, E.W. Myers, and D.J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215: 403-410.
2. Barizza, E., F. Lo Schiavo, M. Terzi, and F. Filippini. 1999. Evidence suggesting protein tyrosine phosphorylation in plants depends on the developmental conditions. FEBS Lett. 447: 191-194.
3. Barnes, S.A., N.K. Nishizawa, R.B. Quaggio, G.C. Whitelam, and N.H. Chua. 1996a. Far-red light blocks greening of Arabidopsis seedlings via a phytochrome A-mediated change in plastid development. Plant Cell 8: 601-615.
4. Barnes, S.A., R.B. Quaggio, G.C. Whitelam, and N.H. Chua. 1996b. fhy1 defines a branch point in phytochrome A signal transduction pathways for gene expression. Plant J. 10: 1155-1161.
5. Bowler, C., G. Neuhaus, H. Yamagata, and N.H. Chua. 1994. Cyclic GMP and calcium mediate phytochrome phototransduction. Cell 77: 73-81.
6. Canton, F.R. and P.H. Quail. 1999. Both phyA and phyB mediate light-imposed repression of PHYA gene expression in Arabidopsis. Plant Physiol. 121: 1207-1216.
7. Choi, G., H. Yi, J. Lee, Y.K. Kwon, M.S. Soh, B. Shin, Z. Luka, T.R. Hahn, and P.S. Song. 1999. Phytochrome signalling is mediated through nucleoside diphosphate kinase 2. Nature 401: 610-613.
8. Clough, S.J. and A.F. Bent. 1998. Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J. 16: 735-743.
9. Deng, X.W. and P.H. Quail. 1999. Signalling in light-controlled development. Semin. Cell Dev. Biol. 10: 121-129.
10. Di Laurenzio, L., J. Wysocka-Diller, J.E. Malamy, L. Pysh, Y. Helariutta, G. Freshour, M.G. Hahn, K.A. Feldmann, and P.N. Benfey. 1996. The SCARECROW gene regulates an asymmetric cell division that is essential for generating the radial organization of the Arabidopsis root. Cell 86: 423-433.
11. Fankhauser, C. and J. Chory. 1997. Light control of plant development. Annu. Rev. Cell. Dev. Biol. 13: 203-229.
12. Fankhauser, C., K.C. Yeh, J.C. Lagarias, H. Zhang, T.D. Elich, and J. Chory. 1999. PKS1, a substrate phosphorylated by phytochrome that modulates light signaling in Arabidopsis. Science 284: 1539-1541.
13. Fukaki, H., J. Wysocka-Diller, T. Kato, H. Fujisawa, P.N. Benfey, and M. Tasaka. 1998. Genetic evidence that the endodermis is essential for shoot gravitropism in Arabidopsis thaliana. Plant J. 14: 425-430.
14. Furuya, M. 1989. Molecular properties and biogenesis of phytochrome I and II. Adv. Biophys. 25: 133-167.
15. _. 1993. Phytochromes: Their molecular species, gene families, and functions. Annu. Rev. Plant Physiol. Plant Mol. Biol. 44: 617-645.
16. Guillen, G., V. Valdes-Lopez, R. Noguez, J. Olivares, L.C. Rodriguez-Zapata, H. Perez, L. Vidali, M.A. Villanueva, and F. Sanchez. 1999. Profilin in Phaseolus vulgaris is encoded by two genes (only one expressed in root nodules) but multiple isoforms are generated in vivo by phosphorylation on tyrosine residues. Plant J. 19: 497-508.
17. Hennig, L., C. Buche, K. Eichenberg, and E. Schäfer. 1999. Dynamic properties of endogenous phytochrome A in Arabidopsis seedlings. Plant Physiol. 121: 571-577.
18. Hoecker, U., Y. Xu, and P.H. Quail. 1998. SPA1: a new genetic locus involved in phytochrome A-specific signal transduction. Plant Cell 10: 19-33.
19. Hoecker, U., J.M. Tepperman, and P.H. Quail. 1999. SPA1, a WD-repeat protein specific to phytochrome A signal transduction. Science 284: 496-499.
20. Hudson, M., C. Ringli, M.T. Boylan, and P.H. Quail. 1999. The FAR1 locus encodes a novel nuclear protein specific to phytochrome A signaling. Genes & Dev. 13: 2017-2027.
21. Kircher, S., L. Kozma-Bognar, L. Kim, E. Adam, K. Harter, E. Schäfer, and F. Nagy. 1999. Light quality and quantity dependent nuclear import of phytochrome-A and B. Plant Cell 11: 1445-1456.
22. Koncz, C., N. Martini, R. Mayerhofer, Z. Koncz-Kalman, H. Korber, G.P. Redei, and J. Schell. 1989. High-frequency T-DNA-mediated gene tagging in plants. Proc. Natl. Acad. Sci. 86: 8467-8471.
23. Kost, B., P. Spielhofer, and N.H. Chua. 1998. A GFP-mouse talin fusion protein labels plant actin filaments in vivo and visualizes the actin cytoskeleton in growing pollen tubes. Plant J. 16: 393-101.
24. Lissemore, J.L. and P.H. Quail. 1988. Rapid transcriptional regulation by phytochrome of the genes for phytochrome and chlorophyll a/b-binding protein in Avena sativa. Mol. Cell. Biol. 8: 4840-4850.
25. Neff, M.M., C. Fankhauser, and J. Chory. 2000. Light: An indicator of time and place. Genes & Dev. 14: 257-271.
26. Neuhaus, G., C. Bowler, R. Kern, and N.H. Chua. 1993. Calcium/calmodulin-dependent and -independent phytochrome signal transduction pathways. Cell 73: 937-952.
27. Ni, M., J.M. Tepperman, and P.H. Quail. 1998. PIF3, a phytochrome-interacting factor necessary for normal photoinduced signal transduction, is a novel basic helix-loop-helix protein. Cell 95: 657-667.
28. Ni, M., J.M. Tepperman, and P.H. Quail. 1999. Binding of phytochrome B to its nuclear signalling partner PIF3 is reversibly induced by light. Nature 400: 781-784.
29. Patschinsky, T., T. Hunter, F.S. Esch, J.A. Cooper, and B.M. Sefton. 1982. Analysis of the sequence of amino acids surrounding sites of tyrosine phosphorylation. Proc. Natl. Acad. Sci. 79: 973-977.
30. Peng, J., P. Carol, D.E. Richards, K.E. King, R.J. Cowling, G.P. Murphy, and N.P. Harberd. 1997. The Arabidopsis GAI gene defines a signaling pathway that negatively regulates gibberellin responses. Genes & Dev. 11: 3194-3205.
31. Peng, J., D.E. Richards, N.M. Hartley, G.P. Murphy, K.M. Devos, J.E. Flintham, J. Beales, L.J. Fish, A.J. Worland, F. Pelica et al. 1999. "Green revolution" genes encode mutant gibberellin response modulators. Nature 400: 256-261.
32. Pysh, L.D., J.W. Wysocka-Diller, C. Camilleri, D. Bouchez, and P.N. Benfey. 1999. The GRAS gene family in Arabidopsis: Sequence characterization and basic expression analysis of the SCARECROW-LIKE genes. Plant J. 18: 111-119.
33. Quail, P.H., M.T. Boylan, B.M. Parks, T.W. Short, Y. Xu, and D. Wagner. 1995. Phytochromes: Photosensory perception and signal transduction. Science 268: 675-680.
34. Sakamoto, K. and A. Nagatani. 1996. Nuclear localization activity of phytochrome B. Plant J. 10: 859-868.
35. Sato, N. 1988. Nucleotide sequence and expression of the phytochrome gene in Pisum sativum: Differential regulation by light of multiple transcripts. Plant Mol. Biol. 11: 697-710.
36. Schumacher, K., T. Schmitt, M. Rossberg, G. Schmitz, and K. Theres. 1999. The Lateral suppressor (Ls) gene of tomato encodes a new member of the VHIID protein family. Proc. Natl. Acad. Sci. 96: 290-295.
37. Silverstone, A.L., C.N. Ciampaglio, and T.P. Sun. 1998. The Arabidopsis RGA gene encodes a transcriptional regulator repressing the gibberellin signal transduction pathway. Plant Cell 10: 155-169.
38. Soh, M.S., S.H. Hong, H. Hanzawa, M. Furuya, and H.G. Nam. 1998. Genetic identification of FIN2, a far red light-specific signaling component of Arabidopsis thaliana. Plant J. 16: 411-419.
39. Sperling, U., B. van Cleve, G. Frick, K. Apel, and G.A. Armstrong. 1997. Overexpression of light-dependent PORA or PORB in plants depleted of endogenous POR by far-red light enhances seedling survival in white light and protects against photooxidative damage. Plant J. 12: 649-658.
40. van Tuinen, A., L.H. Kerckhoffs, A. Nagatani, R.E. Kendrick, and M. Koorneef. 1995. Far-red light-insensitive, phytochrome A-deficient mutants of tomato. Mol. Gen. Genet. 246: 133-141.
41. Whitelam, G.C., E. Johnson, J. Peng, P. Carol, M.L. Anderson, J.S. Cowl, and N.P. Harberd. 1993. Phytochrome A null mutants of Arabidopsis display a wild-type phenotype in white light. Plant Cell 5: 757-768.
42. Yamaguchi, R., M. Nakamura, N. Mochizuki, S.A. Kay, and A. Nagatani. 1999. Light-dependent translocation of a phytochrome B-GFP fusion protein to the nucleus in transgenic Arabidopsis. J. Cell Biol. 145: 437-445.