메뉴 건너뛰기




Volumn 13, Issue 6, 2011, Pages 634-647

Detailed characterization of alterations of chromosomes 7, 9, and 10 in glioblastomas as assessed by single-nucleotide polymorphism arrays

Author keywords

[No Author keywords available]

Indexed keywords

EPIDERMAL GROWTH FACTOR RECEPTOR;

EID: 82955249326     PISSN: 15251578     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmoldx.2011.06.003     Document Type: Article
Times cited : (51)

References (79)
  • 1
    • 0035843243 scopus 로고    scopus 로고
    • Brain tumors
    • DeAngelis LM: Brain tumors. N Engl J Med 2001, 344:114-123
    • (2001) N Engl J Med , vol.344 , pp. 114-123
    • DeAngelis, L.M.1
  • 4
    • 4344594951 scopus 로고    scopus 로고
    • Prognostic factors for survival of patients with glioblastoma: Recursive partitioning analysis
    • DOI 10.1215/S1152851703000620
    • Lamborn KR, Chang SM, Prados MD: Prognostic factors for survival of patients with glioblastoma: recursive partitioning analysis. Neuro Oncol 2004, 6:227-235 (Pubitemid 39136506)
    • (2004) Neuro-Oncology , vol.6 , Issue.3 , pp. 227-235
    • Lamborn, K.R.1    Chang, S.M.2    Prados, M.D.3
  • 7
    • 0642306004 scopus 로고    scopus 로고
    • Molecular analysis of glioblastoma: Pathway profiling and its implications for patient therapy
    • Mischel PS, Nelson SF, Cloughesy TF: Molecular analysis of glioblastoma: pathway profiling and its implications for patient therapy. Cancer Biol Ther 2003, 2:242-247
    • (2003) Cancer Biol Ther , vol.2 , pp. 242-247
    • Mischel, P.S.1    Nelson, S.F.2    Cloughesy, T.F.3
  • 10
    • 33645732219 scopus 로고    scopus 로고
    • Molecular pathology of malignant gliomas
    • Louis DN: Molecular pathology of malignant gliomas. Annu Rev Pathol 2006, 1:97-117
    • (2006) Annu Rev Pathol , vol.1 , pp. 97-117
    • Louis, D.N.1
  • 12
    • 70449711757 scopus 로고    scopus 로고
    • Genetic alterations and signaling pathways in the evolution of gliomas
    • Ohgaki H, Kleihues P: Genetic alterations and signaling pathways in the evolution of gliomas. Cancer Sci 2009, 100:2235-2241
    • (2009) Cancer Sci , vol.100 , pp. 2235-2241
    • Ohgaki, H.1    Kleihues, P.2
  • 14
    • 70349330124 scopus 로고    scopus 로고
    • Genomic aberrations in 80 cases of primary glioblastoma multiforme: Pathogenetic heterogeneity and putative cytogenetic pathways
    • Dahlback HS, Brandal P, Meling TR, Gorunova L, Scheie D, Heim S: Genomic aberrations in 80 cases of primary glioblastoma multiforme: pathogenetic heterogeneity and putative cytogenetic pathways. Genes Chromosomes Cancer 2009, 48:908-924
    • (2009) Genes Chromosomes Cancer , vol.48 , pp. 908-924
    • Dahlback, H.S.1    Brandal, P.2    Meling, T.R.3    Gorunova, L.4    Scheie, D.5    Heim, S.6
  • 18
    • 33646230037 scopus 로고    scopus 로고
    • Genetically distinct and clinically relevant subtypes of glioblastoma defined by array-based comparative genomic hybridization (array-CGH)
    • Korshunov A, Sycheva R, Golanov A: Genetically distinct and clinically relevant subtypes of glioblastoma defined by array-based comparative genomic hybridization (array-CGH). Acta Neuropathol 2006, 111:465-474
    • (2006) Acta Neuropathol , vol.111 , pp. 465-474
    • Korshunov, A.1    Sycheva, R.2    Golanov, A.3
  • 19
    • 0031929455 scopus 로고    scopus 로고
    • Genetic analysis of glioblastoma multiforme provides evidence for subgroups within the grade
    • DOI 10.1002/(SICI)1098-2264(199803)21:3<195::AID-GCC3>3.0.CO;2-V
    • Mohapatra G, Bollen AW, Kim DH, Lamborn K, Moore DH, Prados MD, Feuerstein BG: Genetic analysis of glioblastoma multiforme provides evidence for subgroups within the grade. Genes Chromosomes Cancer 1998, 21:195-206 (Pubitemid 28136436)
    • (1998) Genes Chromosomes and Cancer , vol.21 , Issue.3 , pp. 195-206
    • Mohapatra, G.1    Bollen, A.W.2    Kim, D.H.3    Lamborn, K.4    Moore, D.H.5    Prados, M.D.6    Feuerstein, B.G.7
  • 20
    • 42549104976 scopus 로고    scopus 로고
    • Analysis of EGFR overexpression, EGFR gene amplification and the EGFRvIII mutation in Portuguese high-grade gliomas
    • Viana-Pereira M, Lopes JM, Little S, Milanezi F, Basto D, Pardal F, Jones C, Reis RM: Analysis of EGFR overexpression. EGFR gene amplification and the EGFRvIII mutation in Portuguese high-grade gliomas. Anticancer Res 2008, 28:913-920 (Pubitemid 351578937)
    • (2008) Anticancer Research , vol.28 , Issue.2 A , pp. 913-920
    • Viana-Pereira, M.1    Lopes, J.M.2    Little, S.3    Milanezi, F.4    Basto, D.5    Pardal, F.6    Jones, C.7    Reis, R.M.8
  • 21
    • 27744503993 scopus 로고    scopus 로고
    • Clinical significance of EGFR amplification and the aberrant EGFRvIII transcript in conventionally treated astrocytic gliomas
    • DOI 10.1007/s00109-005-0700-2
    • Liu L, Backlund LM, Nilsson BR, Grander D, Ichimura K, Goike HM, Collins VP: Clinical significance of EGFR amplification and the aberrant EGFRvIII transcript in conventionally treated astrocytic gliomas. J Mol Med 2005, 83:917-926 (Pubitemid 41598692)
    • (2005) Journal of Molecular Medicine , vol.83 , Issue.11 , pp. 917-926
    • Liu, L.1    Backlund, L.M.2    Nilsson, B.R.3    Grander, D.4    Ichimura, K.5    Goike, H.M.6    Collins, V.P.7
  • 22
    • 33846218204 scopus 로고    scopus 로고
    • Epidermal growth factor receptor-mediated signal transduction in the development and therapy of gliomas
    • DOI 10.1158/1078-0432.CCR-06-0874
    • Nicholas MK, Lukas RV, Jafri NF, Faoro L, Salgia R: Epidermal growth factor receptor- mediated signal transduction in the development and therapy of gliomas. Clin Cancer Res 2006, 12:7261-7270 (Pubitemid 46095397)
    • (2006) Clinical Cancer Research , vol.12 , Issue.24 , pp. 7261-7270
    • Nicholas, M.K.1    Lukas, R.V.2    Jafri, N.F.3    Faoro, L.4    Salgia, R.5
  • 24
    • 0034761379 scopus 로고    scopus 로고
    • Analysis of loss of heterozygosity on chromosome 10 in patients with malignant astrocytic tumors: Correlation with patient age and survival
    • Tada K, Shiraishi S, Kamiryo T, Nakamura H, Hirano H, Kuratsu J, Kochi M, Saya H, Ushio Y: Analysis of loss of heterozygosity on chromosome 10 in patients with malignant astrocytic tumors: correlation with patient age and survival. J Neurosurg 2001, 95:651-659 (Pubitemid 33031427)
    • (2001) Journal of Neurosurgery , vol.95 , Issue.4 , pp. 651-659
    • Tada, K.1    Shiraishi, S.2    Kamiryo, T.3    Nakamura, H.4    Hirano, H.5    Kuratsu, J.-I.6    Kochi, M.7    Saya, H.8    Ushio, Y.9
  • 25
    • 16644376059 scopus 로고    scopus 로고
    • Loss of heterozygosity on chromosome 10q associated with malignancy and prognosis in astrocytic tumors, and discovery of novel loss regions
    • Daido S, Takao S, Tamiya T, Ono Y, Terada K, Ito S, Ouchida M, Date I, Ohmoto T, Shimizu K: Loss of heterozygosity on chromosome 10q associated with malignancy and prognosis in astrocytic tumors, and discovery of novel loss regions. Oncol Rep 2004, 12:789-795
    • (2004) Oncol Rep , vol.12 , pp. 789-795
    • Daido, S.1    Takao, S.2    Tamiya, T.3    Ono, Y.4    Terada, K.5    Ito, S.6    Ouchida, M.7    Date, I.8    Ohmoto, T.9    Shimizu, K.10
  • 26
    • 1842536417 scopus 로고    scopus 로고
    • Analysis of 1p,19q, and 10q as prognostic markers for high-grade astrocytomas using fluorescence in situ hybridization on tissue microarrays from Radiation Therapy Oncology Group trials
    • DOI 10.1215/S1152851703000231
    • Brat DJ, Seiferheld WF, Perry A, Hammond EH, Murray KJ, Schulsinger AR, Mehta MP, Curran WJ: Analysis of 1p, 19q, 9p, and 10q as prognostic markers for high-grade astrocytomas using fluorescence in situ hybridization on tissue microarrays from Radiation Therapy Oncology Group trials. Neuro Oncol 2004, 6:96-103 (Pubitemid 38455755)
    • (2004) Neuro-Oncology , vol.6 , Issue.2 , pp. 96-103
    • Brat, D.1    Seiferheld, W.F.2    Perry, A.3    Hammond, E.H.4    Murray, K.J.5    Schulsinger, A.R.6    Mehta, M.P.7    Curran, W.J.8
  • 31
    • 33750715704 scopus 로고    scopus 로고
    • Glioblastoma multiforme with oligodendroglial component (GBMO): Favorable outcome after postoperative radiotherapy and chemotherapy with nimustine (ACNU) and teniposide (VM26)
    • Vordermark D, Ruprecht K, Rieckmann P, Roggendorf W, Vince GH, Warmuth-Metz M, Kolbl O, Flentje M: Glioblastoma multiforme with oligodendroglial component (GBMO): favorable outcome after postoperative radiotherapy and chemotherapy with nimustine (ACNU) and teniposide (VM26). BMC Cancer 2006, 6:247
    • (2006) BMC Cancer , vol.6 , pp. 247
    • Vordermark, D.1    Ruprecht, K.2    Rieckmann, P.3    Roggendorf, W.4    Vince, G.H.5    Warmuth-Metz, M.6    Kolbl, O.7    Flentje, M.8
  • 36
    • 20144368274 scopus 로고    scopus 로고
    • High-resolution genome-wide mapping of genetic alterations in human glial brain tumors
    • DOI 10.1158/0008-5472.CAN-04-4229
    • Bredel M, Bredel C, Juric D, Harsh GR, Vogel H, Recht LD, Sikic BI: High-resolution genome-wide mapping of genetic alterations in human glial brain tumors. Cancer Res 2005, 65:4088-4096 (Pubitemid 40775645)
    • (2005) Cancer Research , vol.65 , Issue.10 , pp. 4088-4096
    • Bredel, M.1    Bredel, C.2    Juric, D.3    Harsh, G.R.4    Vogel, H.5    Recht, L.D.6    Sikic, B.I.7
  • 40
    • 54549108740 scopus 로고    scopus 로고
    • Comprehensive genomic characterization defines human glioblastoma genes and core pathways
    • Comprehensive genomic characterization defines human glioblastoma genes and core pathways. Nature 2008, 455:1061-1068
    • (2008) Nature , vol.455 , pp. 1061-1068
  • 43
    • 55249111768 scopus 로고    scopus 로고
    • Ploidy status and copy number aberrations in primary glioblastomas defined by integrated analysis of allelic ratios, signal ratios and loss of heterozygosity using 500K SNP Mapping Arrays
    • Gardina PJ, Lo KC, Lee W, Cowell JK, Turpaz Y: Ploidy status and copy number aberrations in primary glioblastomas defined by integrated analysis of allelic ratios, signal ratios and loss of heterozygosity using 500K SNP Mapping Arrays. BMC Genomics 2008, 9:489
    • (2008) BMC Genomics , vol.9 , pp. 489
    • Gardina, P.J.1    Lo, K.C.2    Lee, W.3    Cowell, J.K.4    Turpaz, Y.5
  • 46
    • 75049083572 scopus 로고    scopus 로고
    • Interpreting aCGH-defined karyotypic changes in gliomas using copy number status, loss of heterozygosity and allelic ratios
    • Cowell JK, Lo KC, Luce J, Hawthorn L: Interpreting aCGH-defined karyotypic changes in gliomas using copy number status, loss of heterozygosity and allelic ratios. Exp Mol Pathol 2010, 88:82-89
    • (2010) Exp Mol Pathol , vol.88 , pp. 82-89
    • Cowell, J.K.1    Lo, K.C.2    Luce, J.3    Hawthorn, L.4
  • 49
    • 77950487385 scopus 로고    scopus 로고
    • Whole-genome profiling of pediatric diffuse intrinsic pontine gliomas highlights platelet-derived growth factor receptor alpha and poly (ADP-ribose) polymerase as potential therapeutic targets
    • Zarghooni M, Bartels U, Lee E, Buczkowicz P, Morrison A, Huang A, Bouffet E, Hawkins C: Whole-genome profiling of pediatric diffuse intrinsic pontine gliomas highlights platelet-derived growth factor receptor alpha and poly (ADP-ribose) polymerase as potential therapeutic targets. J Clin Oncol 2010, 28:1337-1344
    • (2010) J Clin Oncol , vol.28 , pp. 1337-1344
    • Zarghooni, M.1    Bartels, U.2    Lee, E.3    Buczkowicz, P.4    Morrison, A.5    Huang, A.6    Bouffet, E.7    Hawkins, C.8
  • 52
    • 2542548405 scopus 로고    scopus 로고
    • dChipSNP: Significance curve and clustering of SNP-array-based loss-of-heterozygosity data
    • DOI 10.1093/bioinformatics/bth069
    • Lin M, Wei LJ, Sellers WR, Lieberfarb M, Wong WH, Li C: dChipSNP: significance curve and clustering of SNP-array-based loss-of-heterozygosity data. Bioinformatics 2004, 20:1233-1240 (Pubitemid 38807579)
    • (2004) Bioinformatics , vol.20 , Issue.8 , pp. 1233-1240
    • Lin, M.1    Wie, L.-J.2    Sellers, W.R.3    Lieberfarb, M.4    Wong, W.H.5    Li, C.6
  • 54
    • 38549158349 scopus 로고    scopus 로고
    • Comprehensive analysis of loss of heterozygosity events in glioblastoma using the 100K SNP mapping arrays and comparison with copy number abnormalities defined by BAC array comparative genomic hybridization
    • DOI 10.1002/gcc.20524
    • Lo KC, Bailey D, Burkhardt T, Gardina P, Turpaz Y, Cowell JK: Comprehensive analysis of loss of heterozygosity events in glioblastoma using the 100K SNP mapping arrays and comparison with copy number abnormalities defined by BAC array comparative genomic hybridization. Genes Chromosomes Cancer 2008, 47:221-237 (Pubitemid 351162853)
    • (2008) Genes Chromosomes and Cancer , vol.47 , Issue.3 , pp. 221-237
    • Lo, K.C.1    Bailey, D.2    Burkhardt, T.3    Gardina, P.4    Turpaz, Y.5    Cowell, J.K.6
  • 57
    • 26944480000 scopus 로고    scopus 로고
    • Novel amplicons on the short arm of chromosome 7 identified using high resolution array CGH contain over expressed genes in addition to EGFR in glioblastoma multiforme
    • DOI 10.1002/gcc.20256
    • Rossi MR, La Duca J, Matsui S, Nowak NJ, Hawthorn L, Cowell JK: Novel amplicons on the short arm of chromosome 7 identified using high resolution array CGH contain over expressed genes in addition to EGFR in glioblastoma multiforme. Genes Chromosomes Cancer 2005, 44:392-404 (Pubitemid 41476790)
    • (2005) Genes Chromosomes and Cancer , vol.44 , Issue.4 , pp. 392-404
    • Rossi, M.R.1    Duca, J.L.2    Matsui, S.-I.3    Nowak, N.J.4    Hawthorn, L.5    Cowell, J.K.6
  • 58
    • 0029993450 scopus 로고    scopus 로고
    • Role of the INK4a locus in tumor suppression and cell mortality
    • DOI 10.1016/S0092-8674(00)81079-X
    • Serrano M, Lee H, Chin L, Cordon-Cardo C, Beach D, DePinho RA: Role of the INK4a locus in tumor suppression and cell mortality. Cell 1996, 85:27-37 (Pubitemid 26116804)
    • (1996) Cell , vol.85 , Issue.1 , pp. 27-37
    • Serrano, M.1    Lee, H.-W.2    Chin, L.3    Cordon-Cardo, C.4    Beach, D.5    DePinho, R.A.6
  • 60
    • 0032484510 scopus 로고    scopus 로고
    • The methylthioadenosine phosphorylase gene is frequently co-deleted with the p16(INK4a) gene in acute type adult T-cell leukemia
    • DOI 10.1002/(SICI)1097-0215(19980105)75:1<51::AID-IJC9>3.0.CO;2-0
    • Hori Y, Hori H, Yamada Y, Carrera CJ, Tomonaga M, Kamihira S, Carson DA, Nobori T: The methylthioadenosine phosphorylase gene is frequently co-deleted with the p16INK4a gene in acute type adult T-cell leukemia. Int J Cancer 1998, 75:51-56 (Pubitemid 28113977)
    • (1998) International Journal of Cancer , vol.75 , Issue.1 , pp. 51-56
    • Hori, Y.1    Hori, H.2    Yamada, Y.3    Carrera, C.J.4    Tomonaga, M.5    Kamihira, S.6    Carson, D.A.7    Nobori, T.8
  • 61
    • 0032548031 scopus 로고    scopus 로고
    • Homozygous deletions of methylthioadenosine phosphorylase (MTAP) are more frequent than p16(INK4A) (CDKN2) homozygous deletions in primary non-small cell lung cancers (NSCLC)
    • Schmid M, Malicki D, Nobori T, Rosenbach MD, Campbell K, Carson DA, Carrera CJ: Homozygous deletions of methylthioadenosine phosphorylase (MTAP) are more frequent than p16INK4A (CDKN2) homozygous deletions in primary non-small cell lung cancers (NSCLC). Oncogene 1998, 17:2669-2675 (Pubitemid 28544709)
    • (1998) Oncogene , vol.17 , Issue.20 , pp. 2669-2675
    • Schmid, M.1    Malicki, D.2    Nobori, T.3    Rosenbach, M.D.4    Campbell, K.5    Carson, D.A.6    Carrera, C.J.7
  • 62
    • 0037112524 scopus 로고    scopus 로고
    • cdkn2a/ARF, acts as a tumor suppressor in a breast cancer cell line
    • Christopher SA, Diegelman P, Porter CW, Kruger WD: Methylthioadenosine phosphorylase, a gene frequently codeleted with p16(cdkN2a/ARF), acts as a tumor suppressor in a breast cancer cell line. Cancer Res 2002, 62:6639-6644 (Pubitemid 35364132)
    • (2002) Cancer Research , vol.62 , Issue.22 , pp. 6639-6644
    • Christopher, S.A.1    Diegelman, P.2    Porter, C.W.3    Kruger, W.D.4
  • 66
    • 0037191917 scopus 로고    scopus 로고
    • Methylation, expression, and mutation analysis of the cell cycle control genes in human brain tumors
    • DOI 10.1038/sj.onc.1206031
    • Yin D, Xie D, Hofmann WK, Miller CW, Black KL, Koeffler HP: Methylation, expression, and mutation analysis of the cell cycle control genes in human brain tumors. Oncogene 2002, 21:8372-8378 (Pubitemid 35477879)
    • (2002) Oncogene , vol.21 , Issue.54 , pp. 8372-8378
    • Yin, D.1    Xie, D.2    Hofmann, W.-K.3    Miller, C.W.4    Black, K.L.5    Koeffler, H.P.6
  • 68
    • 0030928599 scopus 로고    scopus 로고
    • Fine mapping of a region of common deletion on chromosome arm 10p in human glioma
    • DOI 10.1002/(SICI)1098-2264(199710)20:2<167::AID-GCC7>3.0.CO;2-1
    • Voesten AM, Bijleveld EH, Westerveld A, Hulsebos TJ: Fine mapping of a region of common deletion on chromosome arm 10p in human glioma. Genes Chromosomes Cancer 1997, 20:167-172 (Pubitemid 27431141)
    • (1997) Genes Chromosomes and Cancer , vol.20 , Issue.2 , pp. 167-172
    • Voesten, A.M.J.1    Bijleveld, E.H.2    Westerveld, A.3    Hulsebos, T.J.M.4
  • 69
    • 0031967883 scopus 로고    scopus 로고
    • Distinct patterns of deletion on 10p and 10q suggest involvement of multiple tumor suppressor genes in the development of astrocytic gliomas of different malignancy grades
    • DOI 10.1002/(SICI)1098-2264(199805)22:1<9::AID-GCC2>3.0.CO;2-1
    • Ichimura K, Schmidt EE, Miyakawa A, Goike HM, Collins VP: Distinct patterns of deletion on 10p and 10q suggest involvement of multiple tumor suppressor genes in the development of astrocytic gliomas of different malignancy grades. Genes Chromosomes Cancer 1998, 22:9-15 (Pubitemid 28217801)
    • (1998) Genes Chromosomes and Cancer , vol.22 , Issue.1 , pp. 9-15
    • Ichimura, K.1    Schmidt, E.E.2    Miyakawa, A.3    Goike, H.M.4    Collins, V.P.5
  • 72
    • 0242499482 scopus 로고    scopus 로고
    • Genetic Alterations and Aberrant Expression of Genes Related to the Phosphatidyl-Inositol-3′ Kinase/Protein Kinase B (Akt) Signal Transduction Pathway in Glioblastomas
    • Knobbe CB, Reifenberger G: Genetic alterations and aberrant expression of genes related to the phosphatidyl-inositol-3′-kinase/protein kinase B (Akt) signal transduction pathway in glioblastomas. Brain Pathol 2003, 13:507-518 (Pubitemid 37420695)
    • (2003) Brain Pathology , vol.13 , Issue.4 , pp. 507-518
    • Knobbe, C.B.1    Reifenberger, G.2
  • 74
    • 0031679407 scopus 로고    scopus 로고
    • Survival of patients with glioblastoma multiforme is not influenced by altered expression of p16, p53, EGFR, MDM2 or Bcl-2 genes
    • Newcomb EW, Cohen H, Lee SR, Bhalla SK, Bloom J, Hayes RL, Miller DC: Survival of patients with glioblastoma multiforme is not influenced by altered expression of p16, p53. EGFR, MDM2 or Bcl-2 genes. Brain Pathol 1998, 8:655-667 (Pubitemid 28460924)
    • (1998) Brain Pathology , vol.8 , Issue.4 , pp. 655-667
    • Newcomb, E.W.1    Cohen, H.2    Lee, S.R.3    Bhalla, S.K.4    Bloom, J.5    Hayes, R.L.6    Miller, D.C.7
  • 75
    • 0029983510 scopus 로고    scopus 로고
    • Epidermal growth factor receptor: An independent predictor of survival in astrocytic tumors given definitive irradiation
    • DOI 10.1016/0360-3016(95)02184-1
    • Zhu A, Shaeffer J, Leslie S, Kolm P, El-Mahdi AM: Epidermal growth factor receptor: an independent predictor of survival in astrocytic tumors given definitive irradiation. Int J Radiat Oncol Biol Phys 1996, 34:809-815 (Pubitemid 26089218)
    • (1996) International Journal of Radiation Oncology Biology Physics , vol.34 , Issue.4 , pp. 809-815
    • Zhu, A.1    Shaeffer, J.2    Leslie, S.3    Kolm, P.4    El-Mahdi, A.M.5
  • 77
    • 23444435222 scopus 로고    scopus 로고
    • The prognostic relevance of molecular alterations in glioblastomas for patients age < 50 years
    • DOI 10.1002/cncr.21221
    • Korshunov A, Sycheva R, Golanov A: The prognostic relevance of molecular alterations in glioblastomas for patients age < 50 years. Cancer 2005, 104:825-832 (Pubitemid 41113684)
    • (2005) Cancer , vol.104 , Issue.4 , pp. 825-832
    • Korshunov, A.1    Sycheva, R.2    Golanov, A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.