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Volumn 40, Issue , 2012, Pages 25-33

Genetic diversity and differentiation of the endangered tree Elaeagnus mollis Diels (Elaeagnus L.) as revealed by Simple Sequence Repeat (SSR) Markers

Author keywords

Conservation strategy; Elaeagnus mollis Diels; Genetic differentiation; Genetic diversity; Simple sequence repeats (SSR)

Indexed keywords

ALLELE; ANTHROPOGENIC EFFECT; ASSESSMENT METHOD; BAYESIAN ANALYSIS; CLUSTER ANALYSIS; CONSERVATION GENETICS; ENDANGERED SPECIES; GENETIC DIFFERENTIATION; GENETIC MARKER; GENETIC STRUCTURE; HETEROZYGOSITY; MOLECULAR ANALYSIS; POPULATION STRUCTURE; SHRUB; WILD POPULATION;

EID: 80054930168     PISSN: 03051978     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bse.2011.09.009     Document Type: Review
Times cited : (28)

References (56)
  • 2
    • 72549110274 scopus 로고    scopus 로고
    • Genetic diversity and population structure of the endangered and medically important Rheum tanguticum (Polygonaceae) revealed by SSR Markers
    • Chen F.J., Wang A., Chen K.M., Wan D.S., Liu J.Q. Genetic diversity and population structure of the endangered and medically important Rheum tanguticum (Polygonaceae) revealed by SSR Markers. Biochem. Syst. Ecol. 2009, 37:613-621.
    • (2009) Biochem. Syst. Ecol. , vol.37 , pp. 613-621
    • Chen, F.J.1    Wang, A.2    Chen, K.M.3    Wan, D.S.4    Liu, J.Q.5
  • 3
    • 0842322959 scopus 로고    scopus 로고
    • Genetic variation in rare and common plants
    • Cote C.T. Genetic variation in rare and common plants. Annu. Rev. Ecol. Syst. 2003, 34:213-237.
    • (2003) Annu. Rev. Ecol. Syst. , vol.34 , pp. 213-237
    • Cote, C.T.1
  • 5
    • 0031812534 scopus 로고    scopus 로고
    • Isolation and characterization of microsatellites in trembling aspen (Populus tremuloides)
    • Dayanandan S.O., Rajora O.P., Bawa K.S. Isolation and characterization of microsatellites in trembling aspen (Populus tremuloides). Theor. Appl. Genet. 1998, 96:950-956.
    • (1998) Theor. Appl. Genet. , vol.96 , pp. 950-956
    • Dayanandan, S.O.1    Rajora, O.P.2    Bawa, K.S.3
  • 6
    • 84855346358 scopus 로고    scopus 로고
    • Isolation and characterization of 14 dinucleotide microsatellite loci in the endangered herb Saruma henryi Oliv. (Aristolochiaceae)
    • Dong S.S., Huang X., Qian Z.Q., Zhou T.H., Li S., Zhao G.F. Isolation and characterization of 14 dinucleotide microsatellite loci in the endangered herb Saruma henryi Oliv. (Aristolochiaceae). Conserv. Genet. Resour 2009, 1:221-224.
    • (2009) Conserv. Genet. Resour , vol.1 , pp. 221-224
    • Dong, S.S.1    Huang, X.2    Qian, Z.Q.3    Zhou, T.H.4    Li, S.5    Zhao, G.F.6
  • 7
    • 0002594984 scopus 로고
    • A rapid DNA isolation procedure for small quantities of fresh leaf material
    • Doyle J.J., Doyle J.L. A rapid DNA isolation procedure for small quantities of fresh leaf material. Phytochem. Bull. 1987, 19:11-15.
    • (1987) Phytochem. Bull. , vol.19 , pp. 11-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 8
    • 0030208902 scopus 로고    scopus 로고
    • Chloroplast DNA phylogeography of the argan tree of Morocco
    • El-Mousadik A., Petit R.J. Chloroplast DNA phylogeography of the argan tree of Morocco. Mol. Ecol 1996, 5:547-555.
    • (1996) Mol. Ecol , vol.5 , pp. 547-555
    • El-Mousadik, A.1    Petit, R.J.2
  • 9
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of cluster of individuals using the software STRUCTURE: a simulation study
    • Evanno G., Regnaut S., Goudet J. Detecting the number of cluster of individuals using the software STRUCTURE: a simulation study. Mol. Ecol. 2005, 14:2611-2620.
    • (2005) Mol. Ecol. , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 10
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin Version 3.0. An integrated software package for population genetics data analysis
    • Excoffier L., Laval G., Schneider S. Arlequin Version 3.0. An integrated software package for population genetics data analysis. Evol. Bioinform. Online 2005, 1:47-50.
    • (2005) Evol. Bioinform. Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 11
    • 0026681074 scopus 로고
    • Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data
    • Excoffier L., Smouse P.E., Quattro J.M. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 1992, 131:479-491.
    • (1992) Genetics , vol.131 , pp. 479-491
    • Excoffier, L.1    Smouse, P.E.2    Quattro, J.M.3
  • 12
    • 0348087039 scopus 로고    scopus 로고
    • Microsatellite polymorphism in antural populations of wild emmer wheat, Triticum dicoccoides, in Israel
    • Fahima T., Roder M.S., Wendehake V.M., Nevo E. Microsatellite polymorphism in antural populations of wild emmer wheat, Triticum dicoccoides, in Israel. Theor. Applied Genet. 2002, 104:17-29.
    • (2002) Theor. Applied Genet. , vol.104 , pp. 17-29
    • Fahima, T.1    Roder, M.S.2    Wendehake, V.M.3    Nevo, E.4
  • 13
    • 0034046986 scopus 로고    scopus 로고
    • Patterns of genetic variations in rare and widespread plant congeners
    • Gitzendanner M.A., Soltis P.S. Patterns of genetic variations in rare and widespread plant congeners. Am. J. Bot. 2000, 87:783-792.
    • (2000) Am. J. Bot. , vol.87 , pp. 783-792
    • Gitzendanner, M.A.1    Soltis, P.S.2
  • 14
    • 85007320774 scopus 로고
    • FSTAT Version 12. A computer program to calculate F-statistics
    • Goudet J. FSTAT Version 12. A computer program to calculate F-statistics. J. Hered. 1995, 86:485-486.
    • (1995) J. Hered. , vol.86 , pp. 485-486
    • Goudet, J.1
  • 15
    • 0030454565 scopus 로고    scopus 로고
    • Testing differentiation in diploid populations
    • Goudet J., Raymond M., DeMeeus T., Rousset F. Testing differentiation in diploid populations. Genetics 1996, 144:1933-1940.
    • (1996) Genetics , vol.144 , pp. 1933-1940
    • Goudet, J.1    Raymond, M.2    DeMeeus, T.3    Rousset, F.4
  • 16
    • 79251601290 scopus 로고    scopus 로고
    • Assessment of the genetic diversity among Glyptosternum maculatum, an endemic fish of Yarlung Zangbo River, Tibet, China using SSR markers
    • Guo B.Y., Xie C.X., Qi L.L., Qi P.Z., Wu C.W., Abbas K. Assessment of the genetic diversity among Glyptosternum maculatum, an endemic fish of Yarlung Zangbo River, Tibet, China using SSR markers. Biochem. Syst. Ecol. 2010, 38(6):1116-1121.
    • (2010) Biochem. Syst. Ecol. , vol.38 , Issue.6 , pp. 1116-1121
    • Guo, B.Y.1    Xie, C.X.2    Qi, L.L.3    Qi, P.Z.4    Wu, C.W.5    Abbas, K.6
  • 17
    • 0001983532 scopus 로고
    • Allozyme diversity in plant species
    • Sinauer Associates, Sunderland, MA, USA, A.H.D. Brown, M.T. Clegg, A.L. Kahler, B.S. Weir (Eds.)
    • Hamrick J.L., Godt M.J.W. Allozyme diversity in plant species. Plant Population Genetics. Breeding and Germplasm Resources 1989, 43-63. Sinauer Associates, Sunderland, MA, USA. A.H.D. Brown, M.T. Clegg, A.L. Kahler, B.S. Weir (Eds.).
    • (1989) Plant Population Genetics. Breeding and Germplasm Resources , pp. 43-63
    • Hamrick, J.L.1    Godt, M.J.W.2
  • 18
    • 0030429397 scopus 로고    scopus 로고
    • Effects of life history traits on genetic diversity in plant species
    • Hamrick J.L., Godt M.J.W. Effects of life history traits on genetic diversity in plant species. Philos. Trans. R. Soc. Lond. B. 1996, 351:1291-1298.
    • (1996) Philos. Trans. R. Soc. Lond. B. , vol.351 , pp. 1291-1298
    • Hamrick, J.L.1    Godt, M.J.W.2
  • 19
    • 0001983532 scopus 로고
    • Allozyme diversity in plant species
    • Sinauer, Sunderland, UK, A.H.D. Brown, M.T. Clegg, A.L. Kahler, B.S. Weir (Eds.)
    • Hamrick J.L., Godt M.W. Allozyme diversity in plant species. Plant Population Genetics, Breeding and Genetic Variation in Plants 1990, 43-63. Sinauer, Sunderland, UK. A.H.D. Brown, M.T. Clegg, A.L. Kahler, B.S. Weir (Eds.).
    • (1990) Plant Population Genetics, Breeding and Genetic Variation in Plants , pp. 43-63
    • Hamrick, J.L.1    Godt, M.W.2
  • 20
    • 77953130862 scopus 로고    scopus 로고
    • Genetic diversity of wild populations of Rheum tanguticum endemic to China as revealed by ISSR analysis
    • Hu Y.P., Wang L., Xie X.L., Yang J., Li Y., Zhang H.G. Genetic diversity of wild populations of Rheum tanguticum endemic to China as revealed by ISSR analysis. Biochem. Syst. Ecol. 2010, 38:264-274.
    • (2010) Biochem. Syst. Ecol. , vol.38 , pp. 264-274
    • Hu, Y.P.1    Wang, L.2    Xie, X.L.3    Yang, J.4    Li, Y.5    Zhang, H.G.6
  • 21
    • 85016964831 scopus 로고    scopus 로고
    • Megasporogenesis, Microsporogenesis and development of Gametophytes of Elaeagnus mollis
    • Liu Y.J., S J.X., D X.L., Zhang P., W X.Z. Megasporogenesis, Microsporogenesis and development of Gametophytes of Elaeagnus mollis. Scientia Silvae Sinicae 2008, 44(12):39-44.
    • (2008) Scientia Silvae Sinicae , vol.44 , Issue.12 , pp. 39-44
    • Liu, Y.J.1    S, J.X.2    D, X.L.3    Zhang, P.4    W, X.Z.5
  • 22
    • 33748053342 scopus 로고    scopus 로고
    • High genetic diversity vs. low genetic differentiation in Nouelia insignis (Asteraceae), a narrowly distributed and endemic species in China, revealed by ISSR fingerprinting
    • Luan S., Chiang T.Y., Gong X. High genetic diversity vs. low genetic differentiation in Nouelia insignis (Asteraceae), a narrowly distributed and endemic species in China, revealed by ISSR fingerprinting. Ann. Bot. 2006, 98:583-589.
    • (2006) Ann. Bot. , vol.98 , pp. 583-589
    • Luan, S.1    Chiang, T.Y.2    Gong, X.3
  • 23
    • 84855345603 scopus 로고    scopus 로고
    • Study on Leaf Traits of Elaeagnus mollis in Shanxi Province. Master, Shanxi Normal University.
    • Lv, J.Z., 2010. Study on Leaf Traits of Elaeagnus mollis in Shanxi Province. Master, Shanxi Normal University.
    • (2010)
    • Lv, J.Z.1
  • 24
    • 0014054519 scopus 로고
    • The detection of disease clustering and a generalized regression approach
    • Mantel N. The detection of disease clustering and a generalized regression approach. Cancer Res. 1967, 27:209-220.
    • (1967) Cancer Res. , vol.27 , pp. 209-220
    • Mantel, N.1
  • 25
    • 78650185110 scopus 로고    scopus 로고
    • Genetic diversity and phylogenetic relationships of Prunus microcarpa C.A. Mey. subsp. tortusa analyzed by simple sequence repeats (SSRs)
    • Mehmet N.N., Yuksel B., Adem B. Genetic diversity and phylogenetic relationships of Prunus microcarpa C.A. Mey. subsp. tortusa analyzed by simple sequence repeats (SSRs). Sci. Hortic. 2011, 127(3):220-227.
    • (2011) Sci. Hortic. , vol.127 , Issue.3 , pp. 220-227
    • Mehmet, N.N.1    Yuksel, B.2    Adem, B.3
  • 27
    • 0028601668 scopus 로고
    • Outcrossing rates of two endemic Shorea sp. from Sri Lankan tropical rain forest
    • Murawski D.A., Dayanandan B., Bawa K.S. Outcrossing rates of two endemic Shorea sp. from Sri Lankan tropical rain forest. Biotropica 1994, 26:23-29.
    • (1994) Biotropica , vol.26 , pp. 23-29
    • Murawski, D.A.1    Dayanandan, B.2    Bawa, K.S.3
  • 28
    • 0000655270 scopus 로고
    • Genetic distance between populations
    • Nei M. Genetic distance between populations. Am. Nat. 1972, 106:283-292.
    • (1972) Am. Nat. , vol.106 , pp. 283-292
    • Nei, M.1
  • 29
    • 0006919926 scopus 로고
    • Analysis of gene diversity in subdivided populations
    • Nei M. Analysis of gene diversity in subdivided populations. Proc. Nat. Acad. Sci. U.S.A. 1973, 70:3321-3323.
    • (1973) Proc. Nat. Acad. Sci. U.S.A. , vol.70 , pp. 3321-3323
    • Nei, M.1
  • 31
    • 1942485952 scopus 로고    scopus 로고
    • Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants
    • Nybom H. Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Mol. Ecol. 2004, 13:1143-1155.
    • (2004) Mol. Ecol. , vol.13 , pp. 1143-1155
    • Nybom, H.1
  • 32
    • 0034503218 scopus 로고    scopus 로고
    • Effects of life history traits and sampling strategies on genetic diversity estimates obtained with RAPD markers in plants
    • Nybom H., Bartish I.V. Effects of life history traits and sampling strategies on genetic diversity estimates obtained with RAPD markers in plants. Perspect. Plant Ecol. Evol. Syst. 2000, 3:93-114.
    • (2000) Perspect. Plant Ecol. Evol. Syst. , vol.3 , pp. 93-114
    • Nybom, H.1    Bartish, I.V.2
  • 35
    • 0030888985 scopus 로고    scopus 로고
    • Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance
    • Rousset F. Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance. Genetics 1997, 145:1219-1228.
    • (1997) Genetics , vol.145 , pp. 1219-1228
    • Rousset, F.1
  • 37
    • 21444440059 scopus 로고    scopus 로고
    • The endangered causes of Elaeagnus mollis, an endemic to China
    • Shangguan T.L., Zhang F. The endangered causes of Elaeagnus mollis, an endemic to China. Acta Ecologica Sinica 2001, 21(3):502-505.
    • (2001) Acta Ecologica Sinica , vol.21 , Issue.3 , pp. 502-505
    • Shangguan, T.L.1    Zhang, F.2
  • 38
    • 74149083978 scopus 로고    scopus 로고
    • Genetic diversity within and among populations of the endangered and endemic species Primula merrilliana in China
    • Shao J.W., Chen W.L., Peng Y.Q., Zhu G.P., Zhang X.P. Genetic diversity within and among populations of the endangered and endemic species Primula merrilliana in China. Biochem. Syst. Ecol. 2009, 37:699-706.
    • (2009) Biochem. Syst. Ecol. , vol.37 , pp. 699-706
    • Shao, J.W.1    Chen, W.L.2    Peng, Y.Q.3    Zhu, G.P.4    Zhang, X.P.5
  • 39
    • 0028816747 scopus 로고
    • A measure of population subdivision based on microsatellite allele frequencies
    • Slatkin M. A measure of population subdivision based on microsatellite allele frequencies. Genetics 1995, 139:457-462.
    • (1995) Genetics , vol.139 , pp. 457-462
    • Slatkin, M.1
  • 40
    • 84855355091 scopus 로고    scopus 로고
    • Exploitation of SSR marker of Hippophae rhamnoides
    • 93
    • Sun Y.L., Ruan C.J., Jin H. Exploitation of SSR marker of Hippophae rhamnoides. J. Anhui Agri. Sci. 2007, 35(1):45-46. 93.
    • (2007) J. Anhui Agri. Sci. , vol.35 , Issue.1 , pp. 45-46
    • Sun, Y.L.1    Ruan, C.J.2    Jin, H.3
  • 41
    • 34547781750 scopus 로고    scopus 로고
    • MEGA Version 4.0. Molecular evolutionary genetics analysis (MEGA) software
    • Tamura K., Dudley J., Nei M., Kumar S. MEGA Version 4.0. Molecular evolutionary genetics analysis (MEGA) software. Mol. Biol. Evol. 2007, 24:1596-1599.
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 42
    • 0035166893 scopus 로고    scopus 로고
    • Molecular markers in population genetics of forest trees
    • Wang X.R., Szmidt A.E. Molecular markers in population genetics of forest trees. Scand. J. Forest. Res. 2001, 16:199-220.
    • (2001) Scand. J. Forest. Res. , vol.16 , pp. 199-220
    • Wang, X.R.1    Szmidt, A.E.2
  • 43
    • 79851512633 scopus 로고    scopus 로고
    • Chloroplast microsatellite diversity of Clintonia udensis (Liliaceae) populations in East Asia
    • Wang Y.L., Guo J., Zhao G.F. Chloroplast microsatellite diversity of Clintonia udensis (Liliaceae) populations in East Asia. Biochem. Syst. Ecol. 2011, 39:22-30.
    • (2011) Biochem. Syst. Ecol. , vol.39 , pp. 22-30
    • Wang, Y.L.1    Guo, J.2    Zhao, G.F.3
  • 44
    • 33644656369 scopus 로고    scopus 로고
    • Genetic diversity of the endangered and endemic species Psathyrostachys huashanica natural populations using simple sequence repeats (SSRs) markers
    • Wang L., Guo J., Zhao G.F. Genetic diversity of the endangered and endemic species Psathyrostachys huashanica natural populations using simple sequence repeats (SSRs) markers. Biochem. Syst. Ecol. 2006, 34:310-318.
    • (2006) Biochem. Syst. Ecol. , vol.34 , pp. 310-318
    • Wang, L.1    Guo, J.2    Zhao, G.F.3
  • 45
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • Wier B.S., Cockerham C.C. Estimating F-statistics for the analysis of population structure. Evolution 1984, 38:1358-1370.
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Wier, B.S.1    Cockerham, C.C.2
  • 46
    • 0001771498 scopus 로고
    • Evolution in Mendelian populations
    • Wright S. Evolution in Mendelian populations. Genetics 1931, 16:97-159.
    • (1931) Genetics , vol.16 , pp. 97-159
    • Wright, S.1
  • 47
    • 0001024012 scopus 로고
    • Isolation by distance
    • Wright S. Isolation by distance. Genetics 1943, 28:114-138.
    • (1943) Genetics , vol.28 , pp. 114-138
    • Wright, S.1
  • 48
    • 4544304369 scopus 로고    scopus 로고
    • ISSR variation in the endemic and endangered plant Cycas guizhouensis (Cycadaceae)
    • Xiao L.Q., Ge X.J., Gong X., Hao G., Zheng S.X. ISSR variation in the endemic and endangered plant Cycas guizhouensis (Cycadaceae). Ann. Bot. 2004, 94:133-138.
    • (2004) Ann. Bot. , vol.94 , pp. 133-138
    • Xiao, L.Q.1    Ge, X.J.2    Gong, X.3    Hao, G.4    Zheng, S.X.5
  • 49
    • 75549088611 scopus 로고    scopus 로고
    • Biological character and conservation of Endangered Elaeagnus mollis Diels
    • Xie S.L., Ling Y.J. Biological character and conservation of Endangered Elaeagnus mollis Diels. Bull. Bot. Res. 1997, 17(2):153-157.
    • (1997) Bull. Bot. Res. , vol.17 , Issue.2 , pp. 153-157
    • Xie, S.L.1    Ling, Y.J.2
  • 50
    • 79953137223 scopus 로고    scopus 로고
    • Genetic structure and diversity of Medicago lupulina populations in northern and central China based on EST-SSRs markers
    • Yan J., Chu H.J., Wang H.C., Li J.Q. Genetic structure and diversity of Medicago lupulina populations in northern and central China based on EST-SSRs markers. Biodiversity Sci. 2008, 16(3):263-270.
    • (2008) Biodiversity Sci. , vol.16 , Issue.3 , pp. 263-270
    • Yan, J.1    Chu, H.J.2    Wang, H.C.3    Li, J.Q.4
  • 51
    • 0030454094 scopus 로고    scopus 로고
    • The population genetic consequences of habitat fragmentation for plants
    • Young A., Boyle T., Brown T. The population genetic consequences of habitat fragmentation for plants. Trends Ecol. Evol. 1996, 11:413-418.
    • (1996) Trends Ecol. Evol. , vol.11 , pp. 413-418
    • Young, A.1    Boyle, T.2    Brown, T.3
  • 52
    • 33645581875 scopus 로고    scopus 로고
    • Analysis on relationship between geographic distribution of Elaeagnus mollis and Eco-environment Factors in China
    • Zhang F., Han S.Q., Shangguan T.L. Analysis on relationship between geographic distribution of Elaeagnus mollis and Eco-environment Factors in China. J. Shanxi Univ. (Nat. Sci. Ed.) 2001, 24(1):86-88.
    • (2001) J. Shanxi Univ. (Nat. Sci. Ed.) , vol.24 , Issue.1 , pp. 86-88
    • Zhang, F.1    Han, S.Q.2    Shangguan, T.L.3
  • 53
    • 25844517886 scopus 로고    scopus 로고
    • Population patterns of dominant species in Elaesgnus mollis communities
    • Zhang F., Shangguan T.L. Population patterns of dominant species in Elaesgnus mollis communities. Shanxi. Acta Phytoecologica Sinica 2000, 24(5):590-594.
    • (2000) Shanxi. Acta Phytoecologica Sinica , vol.24 , Issue.5 , pp. 590-594
    • Zhang, F.1    Shangguan, T.L.2
  • 55
    • 84855346313 scopus 로고    scopus 로고
    • Study on Biological Activities and Element Analysis of Flavonoids in Elaeagnus mollis. Master, Shanxi Normal University.
    • Zhang, Z.F., 2008. Study on Biological Activities and Element Analysis of Flavonoids in Elaeagnus mollis. Master, Shanxi Normal University.
    • (2008)
    • Zhang, Z.F.1
  • 56
    • 70450220324 scopus 로고    scopus 로고
    • Characterization of EST-derived microsatellite loci in Saruma henryi Oliv., an endangerend Chinese endemic herb
    • Zhou T.H., Zhao G.F., Li S., Qian Z.Q. Characterization of EST-derived microsatellite loci in Saruma henryi Oliv., an endangerend Chinese endemic herb. Popul. Ecol. 2009, 1:67-70.
    • (2009) Popul. Ecol. , vol.1 , pp. 67-70
    • Zhou, T.H.1    Zhao, G.F.2    Li, S.3    Qian, Z.Q.4


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