Isolation and characterization of microsatellites in trembling aspen (Populus tremuloides)

Theoretical and Applied Genetics

Volumn 96, Issue 6-7, 1998, Pages 950-956

  Dayanandan, S ^a,b   Rajora, O P ^b   Bawa, K S ^a  

^a UNIVERSITY OF MASSACHUSETTS BOSTON   (United States)

^b UNIVERSITY OF ALBERTA   (Canada)

Author keywords

Clone identification; Microsatellite loci; Polymorphism; Poplars (Populus); Simple sequence repeats

Indexed keywords

ALLELE; CLONE; DNA ISOLATION; GENETIC COMPATIBILITY; GENETIC SCREENING; GENETIC SELECTION; GENOME LIBRARY; GENOTYPE; HETEROZYGOSITY; MICROSATELLITE DNA; POLYMERASE CHAIN REACTION; POPULUS CANADENSIS; POPULUS DELTOIDES; POPULUS MAXIMOWICZII; POPULUS NIGRA; PRIMER DNA;

POPULUS TREMULOIDES;

EID: 0031812534     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s001220050825     Document Type: Article

References (38)

1. Barrett JW, Rajora OP, Yeh FC, Dancik BP, Strobeck C (1993) Mitochondrial DNA variation and genetic relationships of Populus species. Genome 36:87-93
2. Chase MR, Kesseli RV, Bawa KS (1996) Microsatellite markers for population and conservation genetics of tropical trees. Am J Bot 83:51-57
3. Cheliak WM, Dancik BP (1982) Genetic diversity of natural populations of a clone-forming tree Papulus tremuloides. Can J Genet Cytol 24:611-616
4. Condit R, Hubbell S (1991) Abundance and DNA sequence of two-base repeat regions in tropical tree genomes. Genome 34:66-71
5. Dayanandan S, Bawa, KS, Kesseli RV (1997) Conservation of microsatellites among tropical trees (Leguminosae). Am J Bot 84(12):1658-1663
6. Dewey ME, Bell JC, Smith DN, Neale DB, Moran GF (1996) A genetic linkage map for Pinus radiata based on RFLP, RAPD, and microsatellite markers. Theor Appl Genet 92:673-679
7. Echt CS, Nelson CD (1997) Linkage mapping and genome length in eastern white opine (Pinus strobus L). Theor Appl Genet 94:1031-1037
8. Echt CS, May-Marquardt P, Hseih M, Zahorchak R (1996) Characterization of microsatellite markers in eastern white pine. Genome 39:1102-1108
9. Hearne C, Ghosh S, Todd J (1992) Microsatellites for linkage analysis of genetic traits. Trends Genet 8:288-294
10. Jarret RL, Merrick LC, Holms T, Evans J, Aradhya MK (1997) Simple sequence repeats in watermelon (Citrullus lantus (Thumb.) Matsum. and Nakai). Genome 40:433-441
11. Jerka J, Pethiyagoda C (1995) Simple repetitive DNA sequences from primates: compilation and analysis. J Mol Evol 40:120-126
12. Kijas JMH, Fowler JCS, Thomas MR (1995) An evaluation of sequence-tagged microsatellite site markers for genetic analysis within Citrus and related species. Genome 38:349-355
13. Kostia S, Sirkaa-Liisa V, Vakkari P, Pulkkinen P (1995) Microsatellite sequences in a conifer, Pinus sylvestris. Genome 38:1244-1248
14. Levine I, Cheng HH, Bacter JC, Hillel J (1995) Turkey microsatellite DNA loci amplified by chicken specific primers. Anim Genet 26:107 110
15. Moore SS, Sargeant LL, King TJ, Matick JS, Georges M, Hetzel DJS (1991) The conservation of dinucleotide microsatellites among mammalian genomes allows the use of heterologous PCR primer pairs in closely related species. Genomics 10:654-660
16. Morgante M, Olivieri AM (1993) PCR amplified microsatellites as markers in plant genetics. Plant J 3:175-182
17. Ondro WJ (1991) Present trends and future prospects for poplar utilization in Alberta. For Chron 67:271-274
18. Paetkau D, Strobeck C (1994) Microsatellite analysis of genetic variation in black bear populations. Mol Ecol 3:489-495
19. Pfeiffer A, Olivieri AM, Morgante M (1997) Identification and characterization of microsatellites in Norway spruce (Picea ahies K). Genome 40:411-419
20. Rajora OP (1988) Allozymes as aids for identification and differentiation of some Populus maximowiczii Henry clonal varieties. Biochem Syst Ecol 16:635-640
21. Rajora OP (1989a) Genetic structure and identification of Populus deltoides Marsh. clones based on allozymes. Genome 32: 440-448
22. Rajora OP (1989b) Characterization of 43 Populus nigra L. clones representing selections, cultivars and botanical varieties based on their multilocus allozyme genotypes. Euphytica 43:197-206
23. Rajora OP (1991) A long-term program plan for genetic improvement of aspen and other poplar hardwoods in Alberta. Alberta Forest Service, Edmonton, Alberta
24. Rajora OP, Dancik BP (1992a) Genetic characterization and relationships of Populus alba, P. tremula and P. × canescens, and their clones. Theor Appl Genet 84:291-298
25. Rajora, OP, Dancik BP (1992b) Chloroplast DNA inheritance in Populus. Theor Appl Genet 84:280-285
26. Rajora OP, Dancik BP (1995a) Chloroplast DNA variation in Populus. I. Intraspecific restriction fragment diversity within Populus deltoides, P. niyra, and P. maximowiczii. Theor Appl Genet 90:317-323
27. Rajora OP, Dancik, BP (1995b) Aspen decay and stain and genetic fingerprinting. Research Report, Canada-Alberta Partnership Agreement in Forestry, Edmonton, Alberta
28. Rajora OP, Dancik BP (1995c) Chloroplast DNA variation in Populus. II. Interspecific restriction fragment polymorphisms and genetic relationships among Populus deltoides, P. nigra, P. × canadensis, and P. maximowiczii. Theor Appl Genet 90: 324-330
29. Rajora OP, Zsuffa L (1989) Multilocus genetic structure, characterization and relationships of Populus × canadensis cultivars. Genome 32:99-108
30. Rajora OP, Barrett JW, Dancik BP, Strobeck C (1992) Maternal transmission of mitochondrial DNA in interspecific hybrids of Populus. Curr Genet 22:141-145
31. Schlotterer C, Amos B, Tautz D (1991) Conservation of polymorphic simple sequence loci in cetecean species. Nature 354: 63-65
32. Smith DN, Devey ME (1994) Occurrence and inheritance of microsatellites in Pinus radiata. Genome 37:977-983
33. Terauchi R, Konuma A (1994) Microsatellite polymorphism in Dioscorea tokora, a wild yam species. Genome 37:794-801
34. Van de Yen WTG, McNicol RJ (1996) Microsatellites as DNA markers in Sitka spruce. Theor Appl Genet 93:613-617
35. Wang Z, Weber JL, Zhong G, Tanksley SD (1994) Survey of plant short tandem repeats. Theor Appl Genet: 88:1-6
36. Weber JL (1990) Informativeness of human (dC-dA)n-(dG-dT)n polymorphisms. Genomics 7:524-530
37. Weber JL, May PE (1989) Abundant class of human DNA polymorphysms which can be typed using the polymerase chain reaction. Am J Hum Genet 44:388-396
38. Wu K, Tanksley SD (1993) Abundance, polymorphism and genetic mapping of microsatellites in rice. Mol Gen Genet 241: 225-235