iProphet: Multi-level integrative analysis of shotgun proteomic data improves peptide and protein identification rates and error estimates

Molecular and Cellular Proteomics

Volumn 10, Issue 12, 2011, Pages

  Shteynberg, David ^a   Deutsch, Eric W ^a   Lam, Henry ^b   Eng, Jimmy K ^c   Sun, Zhi ^a   Tasman, Natalie ^a   Mendoza, Luis ^a   Moritz, Robert L ^a   Aebersold, Ruedi ^d,e,f   Nesvizhskii, Alexey I ^g,h  

^a INSTITUTE FOR SYSTEMS BIOLOGY   (United States)

^b HONG KONG UNIVERSITY OF SCIENCE AND TECHNOLOGY   (Hong Kong)

^c UNIVERSITY OF WASHINGTON   (United States)

^d ETH ZURICH   (Switzerland)

^e UNIVERSITY OF ZURICH   (Switzerland)

^f Center for Systems Physiology and Metabolic Diseases   (Switzerland)

^g UNIVERSITY OF MICHIGAN MEDICAL SCHOOL   (United States)

^h UNIVERSITY OF MICHIGAN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PEPTIDE FRAGMENT; PROTEOME;

ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; CELL LYSATE; CHEMISTRY; COMPUTER PROGRAM; CONTROLLED STUDY; GEL ELECTROPHORESIS; HUMAN; HUMAN CELL; LEUKEMIA CELL LINE; LIQUID CHROMATOGRAPHY; MEASUREMENT ERROR; NONHUMAN; PRIORITY JOURNAL; PROBABILITY; PROTEIN ANALYSIS; PROTEIN DATABASE; PROTEIN MODIFICATION; PROTEOMICS; SEARCH ENGINE; STATISTICAL ANALYSIS; STREPTOCOCCUS PYOGENES; TANDEM MASS SPECTROMETRY;

ALGORITHMS; AMINO ACID SEQUENCE; CHEMISTRY; DATA INTERPRETATION, STATISTICAL; HUMANS; JURKAT CELLS; PEPTIDE FRAGMENTS; PROBABILITY; PROTEOME; PROTEOMICS; SEARCH ENGINE; SOFTWARE; STREPTOCOCCUS PYOGENES; TANDEM MASS SPECTROMETRY;

EID: 80053387432     PISSN: 15359476     EISSN: 15359484     Source Type: Journal    
DOI: 10.1074/mcp.M111.007690     Document Type: Article

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