Decoy methods for assessing false positives and false discovery rates in shotgun proteomics

Analytical Chemistry

Volumn 81, Issue 1, 2009, Pages 146-159

  Wang, Guanghui ^a   Wu, Wells W ^a   Zhang, Zheng ^b   Masilamani, Shyama ^b   Shen, Rong Fong ^c  

^a NATIONAL HEART LUNG AND BLOOD INSTITUTE   (United States)

^b VIRGINIA COMMONWEALTH UNIVERSITY   (United States)

^c NATIONAL INSTITUTE ON AGING   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOMARKER DISCOVERIES; DATABASE SEARCHES; DECOY METHODS; EFFECTIVE SIZES; FALSE DISCOVERY RATES; FALSE POSITIVES; FILTERING CRITERIONS; FILTERINGS; FIXED SETS; PROTEIN SAMPLES; PROTEOMICS; RAT KIDNEYS; RATE CALCULATIONS; SEQUEST; SET-UPS; SPECTRUM MATCHES; STANDARD PROTEINS; STOCHASTIC METHODS; TRUE POSITIVES;

AMINES; CARBON FIBER REINFORCED PLASTICS; INFORMATION RETRIEVAL; MOLECULAR BIOLOGY; PROTEINS; SEARCH ENGINES; TARGETS;

DATABASE SYSTEMS;

ALGORITHMS; ANIMALS; CHROMATOGRAPHY, LIQUID; DATABASES, PROTEIN; FALSE POSITIVE REACTIONS; KIDNEY; MALE; PROTEINS; PROTEOMICS; RATS; STOCHASTIC PROCESSES; TANDEM MASS SPECTROMETRY;

EID: 58149465395     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac801664q     Document Type: Article

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