Adaptive discriminant function analysis and reranking of MS/MS database search results for improved peptide identification in shotgun proteomics

Journal of Proteome Research

Volumn 7, Issue 11, 2008, Pages 4878-4889

  Ding, Ying ^a,b   Choi, Hyungwon ^a,b   Nesvizhskii, Alexey I ^a,b  

^a UNIVERSITY OF MICHIGAN MEDICAL SCHOOL   (United States)

^b UNIVERSITY OF MICHIGAN   (United States)

Author keywords

Adaptive discriminant analysis; Database searching; Decoy sequences; Mass accuracy; Peptide identification; Statistical modeling; Tandem mass spectrometry

Indexed keywords

ARTICLE; DISCRIMINANT ANALYSIS; HUMAN; PEPTIDE ANALYSIS; PRIORITY JOURNAL; PROTEIN DATABASE; PROTEOMICS; SERUM; TANDEM MASS SPECTROMETRY; ALGORITHM; CHEMISTRY; METHODOLOGY;

PEPTIDE; PLASMA PROTEIN;

ALGORITHMS; BLOOD PROTEINS; DATABASES, PROTEIN; DISCRIMINANT ANALYSIS; HUMANS; PEPTIDES; PROTEOMICS; TANDEM MASS SPECTROMETRY;

EID: 58149375925     PISSN: 15353893     EISSN: None     Source Type: Journal    
DOI: 10.1021/pr800484x     Document Type: Article

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