Morphology of filamentous fungi: Linking cellular biology to process engineering using Aspergillus niger

Advances in Biochemical Engineering/Biotechnology

Volumn 121, Issue , 2010, Pages 1-21

  Krull, Rainer ^a   Cordes, Christiana ^b   Horn, Harald ^c   Kampen, Ingo ^a   Kwade, Arno ^a   Neu, Thomas R ^d   Nörtemann, Bernd ^a  

^a TECHNICAL UNIVERSITY OF BRAUNSCHWEIG   (Germany)

^b Applied Biosciences and Process Technology   (Germany)

^c TECHNICAL UNIVERSITY OF MUNICH   (Germany)

^d HELMHOLTZ CENTRE FOR ENVIRONMENTAL RESEARCH UFZ   (Germany)

Author keywords

Aspergillus niger; Fluid dynamics; Fungal morphology; Mechanical stress; Systems biotechnology

Indexed keywords

FUNGAL PROTEIN;

ARTICLE; ASPERGILLUS NIGER; BIOLOGICAL MODEL; CELL PROLIFERATION; CELL SIZE; COMPUTER SIMULATION; CYTOLOGY; MECHANOTRANSDUCTION; METABOLIC ENGINEERING; METHODOLOGY; PHYSIOLOGY;

ASPERGILLUS NIGER; CELL PROLIFERATION; CELL SIZE; COMPUTER SIMULATION; CYTOLOGICAL TECHNIQUES; FUNGAL PROTEINS; MECHANOTRANSDUCTION, CELLULAR; METABOLIC ENGINEERING; MODELS, BIOLOGICAL;

ASPERGILLUS NIGER; BACTERIA (MICROORGANISMS); FUNGI;

EID: 80053105731     PISSN: 07246145     EISSN: None     Source Type: Book Series    
DOI: 10.1007/10_2009_60     Document Type: Article

References (92)

1. Cui YQ, Okkerse WJ, van der Lans RGJM, Luyben KChAM (1998) Biotechnol Bioeng 60:216
2. Hagemann T, Ringel A, Hempel DC, Krull R (2007) Biospektrum 2007. In: Proceedings of VAAM-Jahrestagung, Osnabrück, Germany
3. Lin PJ, Hagemann T, Stintzing A, Appel C, Hempel DC, Krull R (2008) In: Proceedings of European Bioperspectives 2008, Book of Abstracts, Hanover, Germany, p 50
4. Grimm LH, Kelly S, Völkerding II, Krull R, Hempel DC (2005) Biotechnol Bioeng 92:879
5. Stintzing A, Pilz R, Hempel DC, Krull R (2008) Chem Ing Tech 80:1837
6. Metz B, Kossen NWF (1977) Biotechnol Bioeng 14:781
7. Trinci APJ (1974) J Gen Microbiol 81:225
8. Schuhmann E, Bergter F (1976) Z Allg Mikrobiol 16:201
9. Caldwell IY, Trinci APJ (1973) Arch Microbiol 88:1
10. King R (1995) Chem Ing Tech 67:553
11. Spohr A, Dam-Mikkelsen C, Carlsen M, Nielsen J, Villadsen J (1998) Biotechnol Bioeng 58:541
12. Paul GC, Thomas CR (1998) In: Schügerl K (ed) Relation between morphology and process performances. Adv Biochem Eng Biotechnol, vol 60. Springer, Berlin, p 2
13. Grimm LH, Kelly S, Krull R, Hempel DC (2005) Appl Microbiol Biotechnol 49:375
14. Bergter F (1978) Z Allg Mikrobiol 18:143
15. Papagianni M (2004) Biotechnol Adv 22:189
16. Kelly S, Grimm LH, Bendig C, Hempel DC, Krull R (2006) Process Biochem 41:2113
17. Grimm LH, Kelly S, Hengstler J, Göbel A, Krull R, Hempel DC (2004) Biotechnol Bioeng 87:213
18. Amanullah A, Leonili E, Nienow AW, Thomas CR (2001) Bioprocess Biosyst Eng 24:101
19. Lin PJ, Grimm LH, Wulkow M, Hempel DC, Krull R (2008) Biotechnol Bioeng 99:341
20. Grimm LH (2006) In: Hempel DC (ed) ibvt-Schriftenreihe, vol 27. FIT-Verlag, Paderborn
21. Paul GC, Kent A, Thomas CR (1993) Biotechnol Bioeng 42:11
22. Bizukojc M, Ledakowicz S (2006) Process Biochem 41:1063
23. Nielsen J, Villadsen J (1994) Bioreaction engineering principles. Plenum, New York, London
24. Papagianni M (2006) Microb Cell Fact 5:1
25. Bowen WR, Lovitt RW (2000) Colloids Surf 173:205
26. Bowen WR, Lovitt RW (2000) J Colloid Interface Sci 228:428
27. Luckham PF (2004) Adv Colloid Interface Sci 111:29
28. Müller DJ, Dufrêne YF (2008) Nat Nanotechnol 3:261
29. Ryoo D, Choi CS (1999) Biotechnol Lett 21:97
30. Fujita M, Iwahori K (1994) J Ferment Bioeng 78:368
31. Israelachvili JN (1991) Intermolecular and surface forces. Academic, San Diego
32. Müller FW, Peukert W (2004) Int J Miner Process 74S:31
33. Götzinger M, Weigl B (2007) Colloids Surf B Biointerfaces 55:44
34. Butt HJ, Cappella B (2005) Surf Sci Rep 59:1
35. Hutter JL, Bechhoefer J (1993) Rev Sci Instrum 64:1868
36. Rinas U, El-Enshasy H, Emmler M, Hille A, Hempel DC, Horn H (2005) Chem Eng Sci 60:2729
37. Hille A (2008) In: Hempel DC (ed) ibvt-Schriftenreihe, vol 32. FIT-Verlag, Paderborn
38. Emerson S (1950) J Bacteriol 60:221
39. Prosser JI (1994) In: Gow NAR, Gadd GM (eds) The growing fungus. Chapman & Hall, London, p 319
40. Marshall KC, Alexander M (1960) J Bacteriol 80:412
41. Pirt SJ (1966) Proc R Soc B 166:369
42. Hamanaka T, Higashiyama K, Fujikawa S, Park EY (2001) Appl Microbiol Biotechnol 56:233
43. El-Enshasy H, Hellmuth K, Rinas U (1999) Appl Biochem Biotechnol 81:1
44. Hellendoorn L, Mulder H, Heuvel JCvd, Ottengraf SPP (1998) Biotechnol Bioeng 58:478
45. Bohle K (2009) In: Hempel DC (ed) ibvt-Schriftenreihe, vol 40. FIT-Verlag, Paderborn
46. Cui YQ, Lans RGJMvd, Luyben KCAM (1998) Biotechnol Bioeng 57:409
47. Hille A, Neu TR, Hempel DC, Horn H (2006) Chem Ing Tech 78:627
48. Hille A, Neu TR, Hempel DC, Horn H (2009) Biotechnol Bioeng 103:1202
49. Hille A, Neu TR, Hempel DC, Horn H (2005) Biotechnol Bioeng 92:614
50. Cronenberg CCH, Ottengraf SPP, Heuvel JCvd, Pottel F, Sziele D, Schügerl K, Bellgardt KH (1994) Bioproc Eng 10:209
51. Wittler R, Baumgartl H, Lübbers DW, Schügerl K (1986) Biotechnol Bioeng 28:1024
52. Huang MY, Bungay HR (1973) Biotechnol Bioeng 24:1193
53. Kelly S, Grimm LH, Hengstler J, Schultheis E, Krull R, Hempel DC (2004) Bioprocess Biosyst Eng 26:315
54. Papagianni M, Mattey M, Kristiansen B (1998) Biochem Eng J 2:197
55. Metz B, Bruijn Ewd, Suijdam JCv (1981) Biotechnol Bioeng 23:149
56. Suidjdam JCv, Metz B (1981) Biotechnol Bioeng 23:111
57. Ayazi Shamlou P, Makagiansar HY, Ison AP, Lilliy D, Thomas CR (1994) Chem Eng Sci 49:2621
58. Fujita M, Iwahori KST, Yanakawa K (1994) J Fermet Bioeng 78:368
59. Cui YQ, Lans RGJMvd, Luyben KCAM (1997) Biotechnol Bioeng 55:715
60. Johansen CL, Coolen L, Hunik JH (1998) Biotechnol Prog 14:233
61. Amanullah A, Christensen LH, Hansen K, Nienow AW, Thomas CR (2002) Biotechnol Bioeng 77:815
62. Amanullah A, Jüsten P, Davies A, Paul GC, Nienow AW, Thomas CR (2000) Biochem Eng J 5:109
63. Jüsten P, Paul GC, Nienow AW, Thomas CR (1996) Biotechnol Bioeng 52:672
64. Alkamo R, Micalea G, Grisafia F, Brucatoa A, Ciofalo M (2005) Chem Eng Sci 60:2303
65. Revstedt J, Fuchs L (2002) Chem Eng Technol 25:443
66. Chien KY (1982) AIAA J 20:33
67. Jones W, Launder B (1972) Int J Heat Mass Transf 15:301
68. Launder B, Sharma B (1974) Lett Heat Mass Transf 1:131
69. Launder B, Spalding D (1990) Comput Methods Appl Mech Eng 3:269
70. Wilcox D (1988) AIAA J 26:1414
71. Menter FR (1994) AIAA J 32:1598
72. Appel C, Hagemann T, Kähler CJ, Krull R (2007) Proc 10. Köthener Rührer-Kolloquium, Hochschule Anhalt (FH), 39-50, ISBN-13:978-3-86011-015-7, Köthen
73. Prasad AK, Adrian RJ (1993) Exp Fluids 15:49
74. Prasad AK, Jensen K (1995) Appl Opt 34:7092
75. Appel C, Hagemann T, Lin PJ, Stintzing A, Kähler CJ, Krull R (2007) In: Proceedings of the International Conference on Multiphase Flow ICMF 2007, Leipzig
76. Rodriguez Porcel EM, Casas Lopez JL, Sanchez Perez JA, Fernandez Sevilla JM, Chisti Y (2005) Biochem Eng J 26:139
77. Casas Lopez JL, Sanchez Perez JA, Fernandez Sevilla JM, Rodriguez Porcel EM, Chisti Y (2005) J Biotechnol 116:61
78. Visser J (2009) Eurofung. Fungal Genet Biol 46:S1
79. Pel HJ, de Winde JH, Archer DB, Dyer PS, Hofmann G, Schaap PJ, Turner G, de Vries RP, Albang R, Albermann K, Andersen MR, Bendtsen JD, Benen JA, van den Berg M, Breestraat S, Caddick MX, Contreras R, Cornell M, Coutinho PM, Danchin EG, Debets AJ, Dekker P, van Dijck PW, van Dijk A, Dijkhuizen L, Driessen AJ, d'Enfert C, Geysens S, Goosen C, Groot GS, de Groot PW, Guillemette T, Henrissat B, Herweijer M, van den Hombergh JP, van den Hondel CA, van der Heijden RT, van der Kaaij RM, Klis FM, Kools HJ, Kubicek CP, van Kuyk PA, Lauber J, Lu X, van der Maarel MJ, Meulenberg R, Menke H, Mortimer MA, Nielsen J, Oliver SG, Olsthoorn M, Pal K, van Peij NN, Ram AF, Rinas U, Roubos JA, Sagt CM, Schmoll M, Sun J, Ussery D, Varga J, Vervecken W, van de Vondervoort PJ, Wedler H, Wösten HA, Zeng AP, van Ooyen AJ, Visser J, Stam H (2007) Nat Biotechnol 25:221
80. Andersen MR, Vongsangnak W, Panagiotou G, Salazar MP, Lehmann L, Nielsen J (2008) Proc Natl Acad Sci USA 105:4387
81. Tsang A, Butler G, Powlowski J, Panisko EA, Baker SE (2009) Fungal Genet Biol 46:153
82. Wright JC, Sugden D, Francis-McIntyre S, Riba-Garcia I, Gaskell SJ, Grigoriev IV, Baker SE, Beynon RJ, Hubbard SJ (2009) BMC Genomics 10:61
83. Frisvad JC, Rank C, Nielsen KF, Larsen TO (2009) Med Mycol 47:53
84. Pedersen H, Christensen B, Hjort C, Nielsen J (2000) Metab Eng 1:34
85. Prathumpai W, Gabelgaard JB, Wanchanthuek P, van de Vondervoort PJ, de Groot MJ, McIntyre M, Nielsen J (2003) Biotechnol Prog 19:1136
86. Alvarez-Vasquez F, Gonzalez-Alcon C, Torres NV (2000) Biotechnol Bioeng 70:82
87. Torres NV (1994) Biotechnol Bioeng 44:104
88. David H, Akesson M, Nielsen J (2003) Eur J Biochem 270:4243
89. Melzer G, Dalpiaz A, Kucklick M, Göcke Y, Jonas R, Dersch P, Franco-Lara E, Nörtemann B, Hempel DC (2007) J Biotechnol 132:405
90. Melzer G, Eslahpazir M, Franco-Lara E, Nörtemann B, Hempel DC, Wittmann C (2009) BMC Syst Biol 3:120
91. Andersen MR, Nielsen ML, Nielsen J (2008) Mol Syst Biol 4:178
92. Andersen MR, Lehmann L, Nielsen J (2009) Genome Biol 10:R47