-
1
-
-
69249203647
-
Modeling signal transduction in enzyme cascades with the concept of elementary flux modes
-
J. Behre, and S. Schuster Modeling signal transduction in enzyme cascades with the concept of elementary flux modes J. Comput. Biol. 16 2009 829 844
-
(2009)
J. Comput. Biol.
, vol.16
, pp. 829-844
-
-
Behre, J.1
Schuster, S.2
-
2
-
-
43649083387
-
Structural robustness of metabolic networks with respect to multiple knockouts
-
DOI 10.1016/j.jtbi.2007.09.043, PII S0022519307004729
-
J. Behre, T. Wilhelm, A. von Kamp, E. Ruppin, and S. Schuster Structural robustness of metabolic networks with respect to multiple knockouts J. Theor. Biol. 252 2008 433 441 (Pubitemid 351681901)
-
(2008)
Journal of Theoretical Biology
, vol.252
, Issue.3
, pp. 433-441
-
-
Behre, J.1
Wilhelm, T.2
Von Kamp, A.3
Ruppin, E.4
Schuster, S.5
-
3
-
-
77957280314
-
Systems biology of the metabolism of Mycobacterium tuberculosis
-
D.J.V. Beste, and J. McFadden Systems biology of the metabolism of Mycobacterium tuberculosis Biochem. Soc. Trans. 38 2010 1286 1289
-
(2010)
Biochem. Soc. Trans.
, vol.38
, pp. 1286-1289
-
-
Beste, D.J.V.1
McFadden, J.2
-
4
-
-
77951109180
-
Utilizing elementary mode analysis, pathway thermodynamics, and a genetic algorithm for metabolic flux determination and optimal metabolic network design
-
10.1186/1752-0509-4-49
-
B.A. Boghigian, H. Shi, K. Lee, and B.A. Pfeifer Utilizing elementary mode analysis, pathway thermodynamics, and a genetic algorithm for metabolic flux determination and optimal metabolic network design BMC Syst. Biol. 4 2010 49 10.1186/1752-0509-4-49
-
(2010)
BMC Syst. Biol.
, vol.4
, pp. 49
-
-
Boghigian, B.A.1
Shi, H.2
Lee, K.3
Pfeifer, B.A.4
-
5
-
-
84856571424
-
CASOP GS: Computing intervention strategies targeted at production improvement in genome-scale metabolic networks
-
D. Schomburg, A. Grote, Gesellschaft für Informatik Bonn
-
K. Bohl, L.F. de Figueiredo, O. Hädicke, S. Klamt, C. Kost, S. Schuster, and C. Kaleta CASOP GS: Computing intervention strategies targeted at production improvement in genome-scale metabolic networks D. Schomburg, A. Grote, Lecture Notes in Informatics Vol. P-173 2010 Gesellschaft für Informatik Bonn 71 80
-
(2010)
Lecture Notes in Informatics
, vol.173
, pp. 71-80
-
-
Bohl, K.1
De Figueiredo, L.F.2
Hädicke, O.3
Klamt, S.4
Kost, C.5
Schuster, S.6
Kaleta, C.7
-
6
-
-
77958537509
-
Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions
-
10.1038/msb.2010.68
-
A. Bordbar, N.E. Lewis, J. Schellenberger, B.O. Palsson, and N. Jamshidi Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions Mol. Syst. Biol. 6 2010 422 10.1038/msb.2010.68
-
(2010)
Mol. Syst. Biol.
, vol.6
, pp. 422
-
-
Bordbar, A.1
Lewis, N.E.2
Schellenberger, J.3
Palsson, B.O.4
Jamshidi, N.5
-
7
-
-
8844231118
-
Metabolic pathway analysis of enzyme-deficient human red blood cells
-
DOI 10.1016/j.biosystems.2004.06.004, PII S0303264704001169
-
T. akir, C.S. Tacer, and K.O. Ülgen Metabolic pathway analysis of enzyme-deficient human red blood cells Biosystems 78 2004 49 67 (Pubitemid 39536132)
-
(2004)
BioSystems
, vol.78
, Issue.1-3
, pp. 49-67
-
-
Cakir, T.1
Tacer, C.S.2
Ulgen, K.O.3
-
8
-
-
0037142769
-
Metabolic pathway analysis of a recombinant yeast for rational strain development
-
DOI 10.1002/bit.10305
-
R. Carlson, D. Fell, and F. Srienc Metabolic pathway analysis of a recombinant yeast for rational strain development Biotechnol. Bioeng. 79 2002 121 134 (Pubitemid 34693357)
-
(2002)
Biotechnology and Bioengineering
, vol.79
, Issue.2
, pp. 121-134
-
-
Carlson, R.1
Fell, D.2
Srienc, F.3
-
9
-
-
75549090505
-
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
-
10.1093/nar/gkp875
-
R. Caspi, T. Altman, J.M. Dale, K. Dreher, C.A. Fulcher, F. Gilham, P. Kaipa, A.S. Karthikeyan, A. Kothari, M. Krummenacker, M. Latendresse, and L.A. Mueller The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases Nucleic Acids Res. 38 2010 D473 D479 10.1093/nar/gkp875
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Caspi, R.1
Altman, T.2
Dale, J.M.3
Dreher, K.4
Fulcher, C.A.5
Gilham, F.6
Kaipa, P.7
Karthikeyan, A.S.8
Kothari, A.9
Krummenacker, M.10
Latendresse, M.11
Mueller, L.A.12
-
10
-
-
0008338866
-
Complete set of steady states for the general stoichiometric dynamical system
-
B.L. Clarke Complete set of steady states for the general stoichiometric dynamical system J. Chem. Phys. 75 1981 4970 4979
-
(1981)
J. Chem. Phys.
, vol.75
, pp. 4970-4979
-
-
Clarke, B.L.1
-
11
-
-
0042662951
-
A method for classifying metabolites in topological pathway analyses based on minimization of pathway number
-
DOI 10.1016/S0303-2647(03)00067-4
-
T. Dandekar, F. Moldenhauer, S. Bulik, H. Bertram, and S. Schuster A method for classifying metabolites in topological pathway analyses based on minimization of pathway number Biosystems 70 2003 255 270 (Pubitemid 36993867)
-
(2003)
BioSystems
, vol.70
, Issue.3
, pp. 255-270
-
-
Dandekar, T.1
Moldenhauer, F.2
Bulik, S.3
Bertram, H.4
Schuster, S.5
-
12
-
-
75849164426
-
Computing the shortest elementary flux modes in genome-scale metabolic networks
-
L.F. de Figueiredo, A. Podhorski, A. Rubio, C. Kaleta, J.E. Beasley, S. Schuster, and F.J. Planes Computing the shortest elementary flux modes in genome-scale metabolic networks Bioinformatics 25 2009 3158 3165
-
(2009)
Bioinformatics
, vol.25
, pp. 3158-3165
-
-
De Figueiredo, L.F.1
Podhorski, A.2
Rubio, A.3
Kaleta, C.4
Beasley, J.E.5
Schuster, S.6
Planes, F.J.7
-
13
-
-
58049211936
-
Can sugars be produced from fatty acids? A test case for pathway analysis tools
-
L.F. de Figueiredo, S. Schuster, C. Kaleta, and D.A. Fell Can sugars be produced from fatty acids? A test case for pathway analysis tools Bioinformatics 25 2009 152 158
-
(2009)
Bioinformatics
, vol.25
, pp. 152-158
-
-
De Figueiredo, L.F.1
Schuster, S.2
Kaleta, C.3
Fell, D.A.4
-
14
-
-
58549108388
-
Reconstruction of biochemical networks in microorganisms
-
A.M. Feist, M.J. Herrgard, I. Thiele, J.L. Reed, and B.Ø. Palsson Reconstruction of biochemical networks in microorganisms Nat. Rev. Microbiol. 7 2009 129 143
-
(2009)
Nat. Rev. Microbiol.
, vol.7
, pp. 129-143
-
-
Feist, A.M.1
Herrgard, M.J.2
Thiele, I.3
Reed, J.L.4
Palsson B.Ø5
-
15
-
-
0344443759
-
A Novel Metabolic Cycle Catalyzes Glucose Oxidation and Anaplerosis in Hungry Escherichia coli
-
DOI 10.1074/jbc.M307968200
-
E. Fischer, and U. Sauer A novel metabolic cycle catalyzes glucose oxidation and anaplerosis in hungry Escherichia coli J. Biol. Chem. 278 2003 46446 46451 (Pubitemid 37452216)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.47
, pp. 46446-46451
-
-
Fischer, E.1
Sauer, U.2
-
16
-
-
13244292328
-
Computation of elementary modes: A unifying framework and the new binary approach
-
DOI 10.1186/1471-2105-5-175
-
J. Gagneur, and S. Klamt Computation of elementary modes: a unifying framework and the new binary approach BMC Bioinformatics 5 2004 175 10.1186/1471-2105-5-175 (Pubitemid 40195334)
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 175
-
-
Gagneur, J.1
Klamt, S.2
-
17
-
-
33748049119
-
Matrix formalism to describe functional states of transcriptional regulatory systems
-
DOI 10.1371/journal.pcbi.0020101
-
E.P. Gianchandani, J.A. Papin, N.D. Price, A.R. Joyce, and B.Ø. Palsson Matrix formalism to describe functional states of transcriptional regulatory systems PLoS Comput. Biol. 2 2006 e101 10.1371/journal.pcbi.0020101 (Pubitemid 44298478)
-
(2006)
PLoS Computational Biology
, vol.2
, Issue.8
, pp. 0902-0917
-
-
Gianchandani, E.P.1
Papin, J.A.2
Price, N.D.3
Joyce, A.R.4
Palsson, B.O.5
-
18
-
-
67650872959
-
Functional states of the genome-scale Escherichia coli transcriptional regulatory system
-
10.1371/journal.pcbi.1000403
-
E.P. Gianchandani, A.R. Joyce, B.Ø. Palsson, and J.A. Papin Functional states of the genome-scale Escherichia coli transcriptional regulatory system PLoS Comput. Biol. 5 2009 e1000403 10.1371/journal.pcbi. 1000403
-
(2009)
PLoS Comput. Biol.
, vol.5
, pp. 1000403
-
-
Gianchandani, E.P.1
Joyce, A.R.2
Palsson B.Ø3
Papin, J.A.4
-
19
-
-
77952585143
-
CASOP: A computational approach for strain optimization aiming at high productivity
-
O. Hädicke, and S. Klamt CASOP: A computational approach for strain optimization aiming at high productivity J. Biotechnol. 147 2010 88 101
-
(2010)
J. Biotechnol.
, vol.147
, pp. 88-101
-
-
Hädicke, O.1
Klamt, S.2
-
20
-
-
84856560417
-
EFMEvolver: Computing elementary flux modes in genome-scale metabolic networks
-
I. Grosse, S. Neumann, S. Posch, F. Schreiber, P. Stadler, Gesellschaft für Informatik Bonn
-
C. Kaleta, L.F. de Figueiredo, J. Behre, and S. Schuster EFMEvolver: Computing elementary flux modes in genome-scale metabolic networks I. Grosse, S. Neumann, S. Posch, F. Schreiber, P. Stadler, Lecture Notes in Informatics - Proceedings Vol. P-157 2009 Gesellschaft für Informatik Bonn 179 189
-
(2009)
Lecture Notes in Informatics - Proceedings
, vol.157
, pp. 179-189
-
-
Kaleta, C.1
De Figueiredo, L.F.2
Behre, J.3
Schuster, S.4
-
21
-
-
70349636598
-
Can the whole be less than the sum of its parts? Pathway analysis in genome-scale metabolic networks using elementary flux patterns
-
C. Kaleta, L.F. de Figueiredo, and S. Schuster Can the whole be less than the sum of its parts? Pathway analysis in genome-scale metabolic networks using elementary flux patterns Genome Res. 19 2009 1872 1883
-
(2009)
Genome Res.
, vol.19
, pp. 1872-1883
-
-
Kaleta, C.1
De Figueiredo, L.F.2
Schuster, S.3
-
22
-
-
75549090213
-
KEGG for representation and analysis of molecular networks involving diseases and drugs
-
10.1093/nar/gkp896
-
M. Kanehisa, S. Goto, M. Furumichi, M. Tanabe, and M. Hirakawa KEGG for representation and analysis of molecular networks involving diseases and drugs Nucleic Acids Res. 38 2010 D355 D360 10.1093/nar/gkp896
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Kanehisa, M.1
Goto, S.2
Furumichi, M.3
Tanabe, M.4
Hirakawa, M.5
-
23
-
-
76149135674
-
Theoretical study of lipid biosynthesis in wild-type Escherichia coli and in a protoplast-type L-form using elementary flux mode analysis
-
D. Kenanov, C. Kaleta, A. Petzold, C. Hoischen, S. Diekmann, R.A. Siddiqui, and S. Schuster Theoretical study of lipid biosynthesis in wild-type Escherichia coli and in a protoplast-type L-form using elementary flux mode analysis FEBS J. 277 2010 1023 1034
-
(2010)
FEBS J.
, vol.277
, pp. 1023-1034
-
-
Kenanov, D.1
Kaleta, C.2
Petzold, A.3
Hoischen, C.4
Diekmann, S.5
Siddiqui, R.A.6
Schuster, S.7
-
24
-
-
32144453095
-
Generalized concept of minimal cut sets in biochemical networks
-
DOI 10.1016/j.biosystems.2005.04.009, PII S0303264705001322
-
S. Klamt Generalized concept of minimal cut sets in biochemical networks Biosystems 83 2006 233 247 (Pubitemid 43204329)
-
(2006)
BioSystems
, vol.83
, Issue.2-3 SPEC. ISS.
, pp. 233-247
-
-
Klamt, S.1
-
25
-
-
0036039060
-
Combinatorial complexity of pathway analysis in metabolic networks
-
DOI 10.1023/A:1020390132244
-
S. Klamt, and J. Stelling Combinatorial complexity of pathway analysis in metabolic networks Mol. Biol. Rep. 29 2002 233 236 (Pubitemid 35021891)
-
(2002)
Molecular Biology Reports
, vol.29
, Issue.1-2
, pp. 233-236
-
-
Klamt, S.1
Stelling, J.2
-
26
-
-
0030571222
-
Pathway analysis, engineering, and physiological considerations for redirecting central metabolism
-
DOI 10.1002/(SICI)1097-0290(19961005)52:1<129::AID-BIT13>3.0.CO;2-J
-
J.C. Liao, S.Y. Hou, and Y.P. Chao Pathway analysis, engineering, and physiological considerations for redirecting central metabolism Biotechnol. Bioeng. 52 1996 129 140 (Pubitemid 26317947)
-
(1996)
Biotechnology and Bioengineering
, vol.52
, Issue.1
, pp. 129-140
-
-
Liao, J.C.1
Hou, S.-Y.2
Chao, Y.-P.3
-
27
-
-
77958460555
-
The challenges of integrating multiomic data sets
-
B.Ø. Palsson, and K. Zengler The challenges of integrating multiomic data sets Nat. Chem. Biol. 6 2010 787 789
-
(2010)
Nat. Chem. Biol.
, vol.6
, pp. 787-789
-
-
Palsson B.Ø1
Zengler, K.2
-
28
-
-
0344052685
-
METATOOL: For studying metabolic networks
-
DOI 10.1093/bioinformatics/15.3.251
-
T. Pfeiffer, I. Sánchez-Valdenebro, J.C. Nuño, F. Montero, and S. Schuster METATOOL: For studying metabolic networks Bioinformatics 15 1999 251 257 (Pubitemid 29197003)
-
(1999)
Bioinformatics
, vol.15
, Issue.3
, pp. 251-257
-
-
Pfeiffer, T.1
Sanchez-Valdenebro, I.2
Nuno, J.C.3
Montero, F.4
Schuster, S.5
-
29
-
-
0037317848
-
Elementary modes analysis of photosynthate metabolism in the chloroplast stroma
-
DOI 10.1046/j.1432-1033.2003.03390.x
-
M.G. Poolman, D.A. Fell, and C.A. Raines Elementary modes analysis of photosynthate metabolism in the chloroplast stroma Eur. J. Biochem. 270 2003 430 439 (Pubitemid 36177310)
-
(2003)
European Journal of Biochemistry
, vol.270
, Issue.3
, pp. 430-439
-
-
Poolman, M.G.1
Fell, D.A.2
Raines, C.A.3
-
30
-
-
9544253891
-
Genome-scale models of microbial cells: Evaluating the consequences of constraints
-
DOI 10.1038/nrmicro1023
-
N.D. Price, J.L. Reed, and B.Ø. Palsson Genome-scale models of microbial cells: Evaluating the consequences of constraints Nat. Rev. Microbiol. 2 2004 886 897 (Pubitemid 39567269)
-
(2004)
Nature Reviews Microbiology
, vol.2
, Issue.11
, pp. 886-897
-
-
Price, N.D.1
Reed, J.L.2
Palsson, B.O.3
-
31
-
-
65649105134
-
Constraint-based analysis of metabolic capacity of Salmonella typhimurium during host-pathogen interaction
-
10.1186/1752-0509-3-38
-
A. Raghunathan, J. Reed, S. Shin, B.Ø. Palsson, and S. Daefler Constraint-based analysis of metabolic capacity of Salmonella typhimurium during host-pathogen interaction BMC Syst. Biol. 3 2009 38 10.1186/1752-0509-3-38
-
(2009)
BMC Syst. Biol.
, vol.3
, pp. 38
-
-
Raghunathan, A.1
Reed, J.2
Shin, S.3
Palsson B.Ø4
Daefler, S.5
-
32
-
-
77956649528
-
Metabolic reconstruction, constraint-based analysis and game theory to probe genome-scale metabolic networks
-
E. Ruppin, J.A. Papin, L.F. de Figueiredo, and S. Schuster Metabolic reconstruction, constraint-based analysis and game theory to probe genome-scale metabolic networks Curr. Opin. Biotechnol. 21 2010 502 510
-
(2010)
Curr. Opin. Biotechnol.
, vol.21
, pp. 502-510
-
-
Ruppin, E.1
Papin, J.A.2
De Figueiredo, L.F.3
Schuster, S.4
-
33
-
-
0034615791
-
Theory for the systemic definition of metabolic pathways and their use in interpreting metabolic function from a pathway-oriented perspective
-
C.H. Schilling, D. Letscher, and B.Ø. Palsson Theory for the systemic definition of metabolic pathways and their use in interpreting metabolic function from a pathway-oriented perspective J. Theor. Biol. 203 2000 229 248
-
(2000)
J. Theor. Biol.
, vol.203
, pp. 229-248
-
-
Schilling, C.H.1
Letscher, D.2
Palsson B.Ø3
-
35
-
-
0000029295
-
On Elementary Flux Modes in biochemical reaction systems at steady state
-
S. Schuster, and C. Hilgetag On Elementary Flux Modes in biochemical reaction systems at steady state J. Biol. Syst. 2 1994 165 182
-
(1994)
J. Biol. Syst.
, vol.2
, pp. 165-182
-
-
Schuster, S.1
Hilgetag, C.2
-
36
-
-
27144455400
-
Adenine and adenosine salvage pathways in erythrocytes and the role of S-adenosylhomocysteine hydrolase: A theoretical study using elementary flux modes
-
DOI 10.1111/j.1742-4658.2005.04924.x
-
S. Schuster, and D. Kenanov Adenine and adenosine salvage pathways in erythrocytes and the role of S-adenosylhomocysteine hydrolase. A theoretical study using elementary flux modes FEBS J. 272 2005 5278 5290 (Pubitemid 41503157)
-
(2005)
FEBS Journal
, vol.272
, Issue.20
, pp. 5278-5290
-
-
Schuster, S.1
Kenanov, D.2
-
37
-
-
0033080396
-
Detection of elementary flux modes in biochemical networks: A promising tool for pathway analysis and metabolic engineering
-
DOI 10.1016/S0167-7799(98)01290-6, PII S0167779998012906
-
S. Schuster, T. Dandekar, and D.A. Fell Detection of elementary flux modes in biochemical networks: A promising tool for pathway analysis and metabolic engineering Trends Biotechnol. 17 1999 53 60 (Pubitemid 29332898)
-
(1999)
Trends in Biotechnology
, vol.17
, Issue.2
, pp. 53-60
-
-
Schuster, S.1
Dandekar, T.2
Fell, D.A.3
-
38
-
-
0036691976
-
Reaction routes in biochemical reaction systems: Algebraic properties, validated calculation procedure and example from nucleotide metabolism
-
DOI 10.1007/s002850200143
-
S. Schuster, C. Hilgetag, J.H. Woods, and D.A. Fell Reaction routes in biochemical reaction systems: Algebraic properties, validated calculation procedure and example from nucleotide metabolism J. Math. Biol. 45 2002 153 181 (Pubitemid 44200164)
-
(2002)
Journal of Mathematical Biology
, vol.45
, Issue.2
, pp. 153-181
-
-
Schuster, S.1
Hilgetag, C.2
Woods, J.H.3
Fell, P.A.4
-
39
-
-
0036188159
-
Exploring the pathway structure of metabolism: Decomposition into subnetworks and application to Mycoplasma pneumoniae
-
S. Schuster, T. Pfeiffer, F. Moldenhauer, I. Koch, and T. Dandekar Exploring the pathway structure of metabolism: Decomposition into subnetworks and application to Mycoplasma pneumoniae Bioinformatics 18 2002 351 361 (Pubitemid 34183123)
-
(2002)
Bioinformatics
, vol.18
, Issue.2
, pp. 351-361
-
-
Schuster, S.1
Pfeiffer, T.2
Moldenhauer, F.3
Koch, I.4
Dandekar, T.5
-
40
-
-
39549114813
-
Observing metabolic functions at the genome scale
-
DOI 10.1186/gb-2007-8-6-r123
-
J.M. Schwartz, C. Gaugain, J.C. Nacher, A. de Daruvar, and M. Kanehisa Observing metabolic functions at the genome scale Genome Biol. 8 2007 R123 10.1186/gb-2007-8-6-r123 (Pubitemid 351903159)
-
(2007)
Genome Biology
, vol.8
, Issue.6
-
-
Schwartz, J.-M.1
Gaugain, C.2
Nacher, J.C.3
De Daruvar, A.4
Kanehisa, M.5
-
41
-
-
0037079050
-
Metabolic network structure determines key aspects of functionality and regulation
-
DOI 10.1038/nature01166
-
J. Stelling, S. Klamt, K. Bettenbrock, S. Schuster, and E.D. Gilles Metabolic network structure determines key aspects of functionality and regulation Nature 420 2002 190 193 (Pubitemid 35340124)
-
(2002)
Nature
, vol.420
, Issue.6912
, pp. 190-193
-
-
Stelling, J.1
Klamt, S.2
Bettenbrock, K.3
Schuster, S.4
Gilles, E.D.5
-
43
-
-
52949098408
-
Large-scale computation of elementary flux modes with bit pattern trees
-
10.1093/bioinformatics/btn401
-
M. Terzer, and J. Stelling Large-scale computation of elementary flux modes with bit pattern trees Bioinformatics 24 2008 2229 2235 10.1093/bioinformatics/btn401
-
(2008)
Bioinformatics
, vol.24
, pp. 2229-2235
-
-
Terzer, M.1
Stelling, J.2
-
44
-
-
75149129569
-
A protocol for generating a high-quality genome-scale metabolic reconstruction
-
10.1038/nprot.2009.203
-
I. Thiele, and B.Ø. Palsson A protocol for generating a high-quality genome-scale metabolic reconstruction Nat. Protoc. 5 2010 93 121 10.1038/nprot.2009.203
-
(2010)
Nat. Protoc.
, vol.5
, pp. 93-121
-
-
Thiele, I.1
Palsson B.Ø2
-
45
-
-
70350517579
-
Metabolic engineering of Escherichia coli for efficient conversion of glycerol to ethanol
-
C.T. Trinh, and F. Srienc Metabolic engineering of Escherichia coli for efficient conversion of glycerol to ethanol Appl. Environ. Microbiol. 75 2009 6696 6705
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 6696-6705
-
-
Trinh, C.T.1
Srienc, F.2
-
46
-
-
33749448704
-
Design, construction and performance of the most efficient biomass producing E. coli bacterium
-
DOI 10.1016/j.ymben.2006.07.006, PII S109671760600067X
-
C.T. Trinh, R. Carlson, A. Wlaschin, and F. Srienc Design, construction and performance of the most efficient biomass producing E. coli bacterium Metab. Eng. 8 2006 628 638 (Pubitemid 44512166)
-
(2006)
Metabolic Engineering
, vol.8
, Issue.6
, pp. 628-638
-
-
Trinh, C.T.1
Carlson, R.2
Wlaschin, A.3
Srienc, F.4
-
47
-
-
76749169796
-
Rational design and construction of an efficient E. coli for production of diapolycopendioic acid
-
P. Unrean, C.T. Trinh, and F. Srienc Rational design and construction of an efficient E. coli for production of diapolycopendioic acid Metab. Eng. 12 2010 112 122
-
(2010)
Metab. Eng.
, vol.12
, pp. 112-122
-
-
Unrean, P.1
Trinh, C.T.2
Srienc, F.3
-
48
-
-
16344382935
-
An improved algorithm for stoichiometric network analysis: Theory and applications
-
DOI 10.1093/bioinformatics/bti127
-
R. Urbanczik, and C. Wagner An improved algorithm for stoichiometric network analysis: Theory and applications Bioinformatics 21 2005 1203 1210 (Pubitemid 40467946)
-
(2005)
Bioinformatics
, vol.21
, Issue.7
, pp. 1203-1210
-
-
Urbanczik, R.1
Wagner, C.2
-
49
-
-
0000491361
-
Conversion of fatty acids to carbohydrate: Application of isotopes to this problem and role of the Krebs cycle as a synthetic pathway
-
E.O. Weinman, E.H. Srisower, and I.L. Chaikoff Conversion of fatty acids to carbohydrate: Application of isotopes to this problem and role of the Krebs cycle as a synthetic pathway Physiol. Rev. 37 1957 252 272
-
(1957)
Physiol. Rev.
, vol.37
, pp. 252-272
-
-
Weinman, E.O.1
Srisower, E.H.2
Chaikoff, I.L.3
-
50
-
-
27144450553
-
Analysis of structural robustness of metabolic networks
-
T. Wilhelm, J. Behre, and S. Schuster Analysis of structural robustness of metabolic networks Syst. Biol. (Stevenage) 1 2004 114 120
-
(2004)
Syst. Biol. (Stevenage)
, vol.1
, pp. 114-120
-
-
Wilhelm, T.1
Behre, J.2
Schuster, S.3
-
51
-
-
60849128208
-
Analysis on relationship between extreme pathways and correlated reaction sets
-
10.1186/1471-2105-10-S1-S58
-
Y. Xi, Y.P.P. Chen, M. Cao, W. Wang, and F. Wang Analysis on relationship between extreme pathways and correlated reaction sets BMC Bioinformatics 10 Suppl 1 2009 S58 10.1186/1471-2105-10-S1-S58
-
(2009)
BMC Bioinformatics
, vol.10
, Issue.SUPPL. 1
, pp. 58
-
-
Xi, Y.1
Chen, Y.P.P.2
Cao, M.3
Wang, W.4
Wang, F.5
-
52
-
-
36348959154
-
Estimation of the number of extreme pathways for metabolic networks
-
DOI 10.1186/1471-2105-8-363
-
M. Yeung, I. Thiele, and B.Ø. Palsson Estimation of the number of extreme pathways for metabolic networks BMC Bioinformatics 8 2007 363 10.1186/1471-2105-8-363 (Pubitemid 350153341)
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 363
-
-
Yeung, M.1
Thiele, I.2
Palsson, B.Oo.3
|