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Volumn 6, Issue 8, 2011, Pages

Co-regulation of histone-modifying enzymes in cancer

Author keywords

[No Author keywords available]

Indexed keywords

HISTONE DEMETHYLASE; HISTONE METHYLTRANSFERASE; HISTONE; HISTONE LYSINE METHYLTRANSFERASE;

EID: 80051957764     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0024023     Document Type: Article
Times cited : (14)

References (41)
  • 1
    • 34948900481 scopus 로고    scopus 로고
    • Histone H3K4 demethylases are essential in development and differentiation
    • Benevolenskaya EV, (2007) Histone H3K4 demethylases are essential in development and differentiation. Biochem Cell Biol 85: 435-443.
    • (2007) Biochem Cell Biol , vol.85 , pp. 435-443
    • Benevolenskaya, E.V.1
  • 2
    • 77956643239 scopus 로고    scopus 로고
    • Quantitative interaction proteomics and genome-wide profiling of epigenetic histone marks and their readers
    • Vermeulen M, Eberl HC, Matarese F, Marks H, Denissov S, et al. (2010) Quantitative interaction proteomics and genome-wide profiling of epigenetic histone marks and their readers. Cell 142: 967-980.
    • (2010) Cell , vol.142 , pp. 967-980
    • Vermeulen, M.1    Eberl, H.C.2    Matarese, F.3    Marks, H.4    Denissov, S.5
  • 4
    • 67349266612 scopus 로고    scopus 로고
    • Haematopoietic malignancies caused by dysregulation of a chromatin-binding PHD finger
    • Wang GG, Song J, Wang Z, Dormann HL, Casadio F, et al. (2009) Haematopoietic malignancies caused by dysregulation of a chromatin-binding PHD finger. Nature 459: 847-851.
    • (2009) Nature , vol.459 , pp. 847-851
    • Wang, G.G.1    Song, J.2    Wang, Z.3    Dormann, H.L.4    Casadio, F.5
  • 5
    • 49349114931 scopus 로고    scopus 로고
    • Genome-wide analysis of the H3K4 histone demethylase RBP2 reveals a transcriptional program controlling differentiation
    • Lopez-Bigas N, Kisiel TA, Dewaal DC, Holmes KB, Volkert TL, et al. (2008) Genome-wide analysis of the H3K4 histone demethylase RBP2 reveals a transcriptional program controlling differentiation. Mol Cell 31: 520-530.
    • (2008) Mol Cell , vol.31 , pp. 520-530
    • Lopez-Bigas, N.1    Kisiel, T.A.2    Dewaal, D.C.3    Holmes, K.B.4    Volkert, T.L.5
  • 6
    • 0033786540 scopus 로고    scopus 로고
    • A screen for new trithorax group genes identified little imaginal discs, the Drosophila melanogaster homologue of human retinoblastoma binding protein 2
    • Gildea JJ, Lopez R, Shearn A, (2000) A screen for new trithorax group genes identified little imaginal discs, the Drosophila melanogaster homologue of human retinoblastoma binding protein 2. Genetics 156: 645-663.
    • (2000) Genetics , vol.156 , pp. 645-663
    • Gildea, J.J.1    Lopez, R.2    Shearn, A.3
  • 8
    • 33947245128 scopus 로고    scopus 로고
    • RBP2 belongs to a family of demethylases, specific for tri-and dimethylated lysine 4 on histone 3
    • Christensen J, Agger K, Cloos PA, Pasini D, Rose S, et al. (2007) RBP2 belongs to a family of demethylases, specific for tri-and dimethylated lysine 4 on histone 3. Cell 128: 1063-1076.
    • (2007) Cell , vol.128 , pp. 1063-1076
    • Christensen, J.1    Agger, K.2    Cloos, P.A.3    Pasini, D.4    Rose, S.5
  • 9
    • 4644220954 scopus 로고    scopus 로고
    • MLL: a histone methyltransferase disrupted in leukemia
    • Hess JL, (2004) MLL: a histone methyltransferase disrupted in leukemia. Trends Mol Med 10: 500-507.
    • (2004) Trends Mol Med , vol.10 , pp. 500-507
    • Hess, J.L.1
  • 10
    • 0035313867 scopus 로고    scopus 로고
    • The Polycomb group-no longer an exclusive club?
    • Brock HW, van Lohuizen M, (2001) The Polycomb group-no longer an exclusive club? Curr Opin Genet Dev 11: 175-181.
    • (2001) Curr Opin Genet Dev , vol.11 , pp. 175-181
    • Brock, H.W.1    van Lohuizen, M.2
  • 11
    • 33646230318 scopus 로고    scopus 로고
    • Histone and DNA methylation defects at Hox genes in mice expressing a SET domain-truncated form of Mll
    • Terranova R, Agherbi H, Boned A, Meresse S, Djabali M, (2006) Histone and DNA methylation defects at Hox genes in mice expressing a SET domain-truncated form of Mll. Proc Natl Acad Sci U S A 103: 6629-6634.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 6629-6634
    • Terranova, R.1    Agherbi, H.2    Boned, A.3    Meresse, S.4    Djabali, M.5
  • 13
    • 77957154350 scopus 로고    scopus 로고
    • Throwing the cancer switch: reciprocal roles of polycomb and trithorax proteins
    • Mills AA, (2010) Throwing the cancer switch: reciprocal roles of polycomb and trithorax proteins. Nat Rev Cancer 10: 669-682.
    • (2010) Nat Rev Cancer , vol.10 , pp. 669-682
    • Mills, A.A.1
  • 15
    • 78650638953 scopus 로고    scopus 로고
    • Integrative model of genomic factors for determining binding site selection by estrogen receptor-alpha
    • Joseph R, Orlov YL, Huss M, Sun W, Kong SL, et al. (2010) Integrative model of genomic factors for determining binding site selection by estrogen receptor-alpha. Mol Syst Biol 6: 456.
    • (2010) Mol Syst Biol , vol.6 , pp. 456
    • Joseph, R.1    Orlov, Y.L.2    Huss, M.3    Sun, W.4    Kong, S.L.5
  • 16
    • 15844394270 scopus 로고    scopus 로고
    • An Mll-AF9 fusion gene made by homologous recombination causes acute leukemia in chimeric mice: a method to create fusion oncogenes
    • Corral J, Lavenir I, Impey H, Warren AJ, Forster A, et al. (1996) An Mll-AF9 fusion gene made by homologous recombination causes acute leukemia in chimeric mice: a method to create fusion oncogenes. Cell 85: 853-861.
    • (1996) Cell , vol.85 , pp. 853-861
    • Corral, J.1    Lavenir, I.2    Impey, H.3    Warren, A.J.4    Forster, A.5
  • 17
    • 34249026300 scopus 로고    scopus 로고
    • High-resolution profiling of histone methylations in the human genome
    • Barski A, Cuddapah S, Cui K, Roh TY, Schones DE, et al. (2007) High-resolution profiling of histone methylations in the human genome. Cell 129: 823-837.
    • (2007) Cell , vol.129 , pp. 823-837
    • Barski, A.1    Cuddapah, S.2    Cui, K.3    Roh, T.Y.4    Schones, D.E.5
  • 18
    • 33947433221 scopus 로고    scopus 로고
    • Histone H3 phosphorylation in the rat pineal gland: adrenergic regulation and diurnal variation
    • Chik CL, Arnason TG, Dukewich WG, Price DM, Ranger A, et al. (2007) Histone H3 phosphorylation in the rat pineal gland: adrenergic regulation and diurnal variation. Endocrinology 148: 1465-1472.
    • (2007) Endocrinology , vol.148 , pp. 1465-1472
    • Chik, C.L.1    Arnason, T.G.2    Dukewich, W.G.3    Price, D.M.4    Ranger, A.5
  • 19
    • 55449105221 scopus 로고    scopus 로고
    • Genomewide analysis of PRC1 and PRC2 occupancy identifies two classes of bivalent domains
    • Ku M, Koche RP, Rheinbay E, Mendenhall EM, Endoh M, et al. (2008) Genomewide analysis of PRC1 and PRC2 occupancy identifies two classes of bivalent domains. PLoS Genet 4: e1000242.
    • (2008) PLoS Genet , vol.4
    • Ku, M.1    Koche, R.P.2    Rheinbay, E.3    Mendenhall, E.M.4    Endoh, M.5
  • 20
    • 55349106954 scopus 로고    scopus 로고
    • Evolutionary history of histone demethylase families: distinct evolutionary patterns suggest functional divergence
    • Zhou X, Ma H, (2008) Evolutionary history of histone demethylase families: distinct evolutionary patterns suggest functional divergence. BMC Evol Biol 8: 294.
    • (2008) BMC Evol Biol , vol.8 , pp. 294
    • Zhou, X.1    Ma, H.2
  • 21
    • 77950809059 scopus 로고    scopus 로고
    • A chromatin-mediated reversible drug-tolerant state in cancer cell subpopulations
    • Sharma SV, Lee DY, Li B, Quinlan MP, Takahashi F, et al. (2010) A chromatin-mediated reversible drug-tolerant state in cancer cell subpopulations. Cell 141: 69-80.
    • (2010) Cell , vol.141 , pp. 69-80
    • Sharma, S.V.1    Lee, D.Y.2    Li, B.3    Quinlan, M.P.4    Takahashi, F.5
  • 22
    • 0038748632 scopus 로고    scopus 로고
    • A novel gene (PLU-1) containing highly conserved putative DNA/chromatin binding motifs is specifically up-regulated in breast cancer
    • Lu PJ, Sundquist K, Baeckstrom D, Poulsom R, Hanby A, et al. (1999) A novel gene (PLU-1) containing highly conserved putative DNA/chromatin binding motifs is specifically up-regulated in breast cancer. J Biol Chem 274: 15633-15645.
    • (1999) J Biol Chem , vol.274 , pp. 15633-15645
    • Lu, P.J.1    Sundquist, K.2    Baeckstrom, D.3    Poulsom, R.4    Hanby, A.5
  • 23
    • 0142105414 scopus 로고    scopus 로고
    • EZH2 is downstream of the pRB-E2F pathway, essential for proliferation and amplified in cancer
    • Bracken AP, Pasini D, Capra M, Prosperini E, Colli E, et al. (2003) EZH2 is downstream of the pRB-E2F pathway, essential for proliferation and amplified in cancer. EMBO Journal 22: 5323-5335.
    • (2003) EMBO Journal , vol.22 , pp. 5323-5335
    • Bracken, A.P.1    Pasini, D.2    Capra, M.3    Prosperini, E.4    Colli, E.5
  • 24
    • 76749139057 scopus 로고    scopus 로고
    • The histone demethylase UTX enables RB-dependent cell fate control
    • Wang JK, Tsai MC, Poulin G, Adler AS, Chen S, et al. (2010) The histone demethylase UTX enables RB-dependent cell fate control. Genes Dev 24: 327-332.
    • (2010) Genes Dev , vol.24 , pp. 327-332
    • Wang, J.K.1    Tsai, M.C.2    Poulin, G.3    Adler, A.S.4    Chen, S.5
  • 25
    • 79955505888 scopus 로고    scopus 로고
    • When signaling kinases meet histones and histone modifiers in the nucleus
    • Baek SH, (2011) When signaling kinases meet histones and histone modifiers in the nucleus. Mol Cell 42: 274-284.
    • (2011) Mol Cell , vol.42 , pp. 274-284
    • Baek, S.H.1
  • 26
    • 0017167185 scopus 로고
    • The clonal evolution of tumor cell populations
    • Nowell PC, (1976) The clonal evolution of tumor cell populations. Science 194: 23-28.
    • (1976) Science , vol.194 , pp. 23-28
    • Nowell, P.C.1
  • 27
    • 75749124332 scopus 로고    scopus 로고
    • Somatic mutations altering EZH2 (Tyr641) in follicular and diffuse large B-cell lymphomas of germinal-center origin
    • Morin RD, Johnson NA, Severson TM, Mungall AJ, An J, et al. (2010) Somatic mutations altering EZH2 (Tyr641) in follicular and diffuse large B-cell lymphomas of germinal-center origin. Nat Genet 42: 181-185.
    • (2010) Nat Genet , vol.42 , pp. 181-185
    • Morin, R.D.1    Johnson, N.A.2    Severson, T.M.3    Mungall, A.J.4    An, J.5
  • 28
    • 77952160818 scopus 로고    scopus 로고
    • MicroRNA-101 negatively regulates Ezh2 and its expression is modulated by androgen receptor and HIF-1alpha/HIF-1beta
    • Cao P, Deng Z, Wan M, Huang W, Cramer SD, et al. (2010) MicroRNA-101 negatively regulates Ezh2 and its expression is modulated by androgen receptor and HIF-1alpha/HIF-1beta. Mol Cancer 9: 108.
    • (2010) Mol Cancer , vol.9 , pp. 108
    • Cao, P.1    Deng, Z.2    Wan, M.3    Huang, W.4    Cramer, S.D.5
  • 29
    • 21744457108 scopus 로고    scopus 로고
    • Global histone modification patterns predict risk of prostate cancer recurrence
    • Seligson DB, Horvath S, Shi T, Yu H, Tze S, et al. (2005) Global histone modification patterns predict risk of prostate cancer recurrence. Nature 435: 1262-1266.
    • (2005) Nature , vol.435 , pp. 1262-1266
    • Seligson, D.B.1    Horvath, S.2    Shi, T.3    Yu, H.4    Tze, S.5
  • 30
    • 62449276460 scopus 로고    scopus 로고
    • Ndy1/KDM2B immortalizes mouse embryonic fibroblasts by repressing the Ink4a/Arf locus
    • Tzatsos A, Pfau R, Kampranis SC, Tsichlis PN, (2009) Ndy1/KDM2B immortalizes mouse embryonic fibroblasts by repressing the Ink4a/Arf locus. Proc Natl Acad Sci U S A 106: 2641-2646.
    • (2009) Proc Natl Acad Sci U S A , vol.106 , pp. 2641-2646
    • Tzatsos, A.1    Pfau, R.2    Kampranis, S.C.3    Tsichlis, P.N.4
  • 31
    • 79953815457 scopus 로고    scopus 로고
    • KDM2b/JHDM1b, an H3K36me2-specific demethylase, is required for initiation and maintenance of acute myeloid leukemia
    • He J, Nguyen AT, Zhang Y, (2011) KDM2b/JHDM1b, an H3K36me2-specific demethylase, is required for initiation and maintenance of acute myeloid leukemia. Blood 117: 3869-3880.
    • (2011) Blood , vol.117 , pp. 3869-3880
    • He, J.1    Nguyen, A.T.2    Zhang, Y.3
  • 32
    • 33748951908 scopus 로고    scopus 로고
    • Essential role for activation of the Polycomb group (PcG) protein chromatin silencing pathway in metastatic prostate cancer
    • Berezovska OP, Glinskii AB, Yang Z, Li XM, Hoffman RM, et al. (2006) Essential role for activation of the Polycomb group (PcG) protein chromatin silencing pathway in metastatic prostate cancer. Cell Cycle 5: 1886-1901.
    • (2006) Cell Cycle , vol.5 , pp. 1886-1901
    • Berezovska, O.P.1    Glinskii, A.B.2    Yang, Z.3    Li, X.M.4    Hoffman, R.M.5
  • 33
    • 36349017912 scopus 로고    scopus 로고
    • A polycomb repression signature in metastatic prostate cancer predicts cancer outcome
    • Yu J, Rhodes DR, Tomlins SA, Cao X, Chen G, et al. (2007) A polycomb repression signature in metastatic prostate cancer predicts cancer outcome. Cancer Res 67: 10657-10663.
    • (2007) Cancer Res , vol.67 , pp. 10657-10663
    • Yu, J.1    Rhodes, D.R.2    Tomlins, S.A.3    Cao, X.4    Chen, G.5
  • 34
    • 69449102464 scopus 로고    scopus 로고
    • Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes
    • Wang Z, Zang C, Cui K, Schones DE, Barski A, et al. (2009) Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes. Cell 138: 1019-1031.
    • (2009) Cell , vol.138 , pp. 1019-1031
    • Wang, Z.1    Zang, C.2    Cui, K.3    Schones, D.E.4    Barski, A.5
  • 36
    • 76249090489 scopus 로고    scopus 로고
    • BioGPS: an extensible and customizable portal for querying and organizing gene annotation resources
    • Wu C, Orozco C, Boyer J, Leglise M, Goodale J, et al. (2009) BioGPS: an extensible and customizable portal for querying and organizing gene annotation resources. Genome Biol 10: R130.
    • (2009) Genome Biol , vol.10
    • Wu, C.1    Orozco, C.2    Boyer, J.3    Leglise, M.4    Goodale, J.5
  • 37
    • 0037314097 scopus 로고    scopus 로고
    • Matrix2png: a utility for visualizing matrix data
    • Pavlidis P, Noble WS, (2003) Matrix2png: a utility for visualizing matrix data. Bioinformatics 19: 295-296.
    • (2003) Bioinformatics , vol.19 , pp. 295-296
    • Pavlidis, P.1    Noble, W.S.2
  • 40
    • 77951947707 scopus 로고    scopus 로고
    • ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data
    • Zhu LJ, Gazin C, Lawson ND, Pages H, Lin SM, et al. (2010) ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data. BMC Bioinformatics 11: 237.
    • (2010) BMC Bioinformatics , vol.11 , pp. 237
    • Zhu, L.J.1    Gazin, C.2    Lawson, N.D.3    Pages, H.4    Lin, S.M.5
  • 41
    • 79955934629 scopus 로고    scopus 로고
    • Gitools: analysis and visualisation of genomic data using interactive heat-maps
    • Perez-Llamas C, Lopez-Bigas N, (2011) Gitools: analysis and visualisation of genomic data using interactive heat-maps. PLoS One 6: e19541.
    • (2011) PLoS One , vol.6
    • Perez-Llamas, C.1    Lopez-Bigas, N.2


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