Variable gain haptic coupling for molecular simulation

2011 IEEE World Haptics Conference, WHC 2011

Volumn , Issue , 2011, Pages 469-474

  Bolopion, Aude ^a   Cagneau, Barthélemy ^b   Redon, Stephane ^c   Régnier, Stéphane ^a  

^a UNIVERSITÉ PIERRE ET MARIE CURIE   (France)

^b Universite de Versailles Saint Quentin   (France)

^c INRIA RHÔNE ALPES   (France)

Author keywords

[No Author keywords available]

Indexed keywords

MOLECULAR INTERACTIONS; MOLECULES;

ATTRACTIVE FORCE; CONSTANT SCALING; FORCE AMPLIFICATION; HAPTIC RENDERING; HIGH DYNAMIC RANGE; MOLECULAR DOCKING SIMULATIONS; MOLECULAR SIMULATIONS; VARIABLE DISPLACEMENT;

MOLECULAR STRUCTURE;

EID: 79961194420     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/WHC.2011.5945531     Document Type: Conference Paper

References (19)

1. M. Hamdi, A. Ferreira., G. Sharma, and C. Mavroidis. Prototyping bio-nanorobots using molecular dynamics simulation and virtual reality. Microelectronics Journal, 39(2):190-201, 2008. (Pubitemid 351163269)
2. F. P. Brooks, M. Ouh-Young, J. J. Batter, and P. J. Kilpatrick. Project GROPE - haptic displays for scientific visualization. In Proceedings of the International Conference on Computer Graphics and Interactive Techniques, pages 177-185, 1990.
3. P.B. Persson, M.D. Cooper, L.A.E. Tibell, S. Ainsworth, A. Ynnerman, and B.-H. Jonsson. Designing and evaluating a haptic system for biomolecular education. In Proceedings of the Virtual Reality Conference, pages 171-178, 2007.
4. H. Nagata, H. Mizushima, and H. Tanaka. Concept and prototype of protein-ligand docking simulator with force feedback technology. Bioinformatics, 18(1):140-146, 2002. (Pubitemid 34145042)
5. Y.-G. Lee and K. W. Lyons. Smoothing haptic interaction using molecular force calculations. Computer-Aided Design, 36(1):75-90, 2004.
6. A. M. Wollacott and K. M. Merz Jr. Haptic applications for molecular structure manipulation. Journal of Molecular Graphics and Modelling, 25(6):801-805, 2007. (Pubitemid 46217920)
7. L. Dominjon, A. Lécuyer, J.-M. Burkhardt, G. Andrade-Barroso, and S. Richir. The "Bubble" technique: interacting with large virtual environments using haptic devices with limited workspace. In Proceedings of the First Joint Eurohaptics Conference and Symposium on Haptic Interfaces for Virtual Environment and Teleoperator Systems, pages 639-640, 2005.
8. E. Subasi and C. Basdogan. A new haptic interaction and visualization approach for rigid molecular docking in virtual environments. Presence: Teleoperators and Virtual Environments, 17(1):73-90, 2008.
9. F. Mobasser and K. Hashtrudi-Zaad. Adaptive teleoperation control using online estimate of operator's arm damping. In Proceedings of the 45th IEEE Conference on Decision and Control, pages 2032-2038, 2006.
10. W.-H. Zhu and S.E. Salcudean. Stability guaranteed teleoperation: an adaptive motion/force control approach. IEEE Transactions on Automatic Control, 45(11):1951-1969, 2000.
11. E. Vander Poorten, T. Kanno, and Y. Yokokohji. Robust variable-scale bilateral control for micro teleoperation. In Proceedings of the IEEE International Conference on Robotics and Automation, pages 655-662, 2008.
12. G. De Gersem, H. Van Brussel, and F. Tendick. Reliable and enhanced stiffness perception in soft-tissue telemanipulation. The International Journal of Robotics Research, 24(10):805-822, 2005. (Pubitemid 41494254)
13. P.B. Persson, M.D. Cooper, G.E. Host, L.A.E. Tibell, and A. Ynnerman. Improved feature detection over large force ranges using history dependent transfer functions. In Third Joint EuroHaptics conference and Symposium on Haptic Interfaces for Virtual Environment and Teleoperator Systems, pages 476-481, 2009.
14. R. Rossi, M. Isorce, S. Morin, J. Flocard, K. Arumugam, S. Crouzy, M. Vivaudou, and S. Redon. Adaptive torsion-angle quasi-statics: a general simulation method with applications to protein structure analysis and design. In Proceedings of the International Conference on Intelligent Systems for Molecular Biology, volume 23, pages i408-i417, 2007.
15. A. Bolopion, B. Cagneau, S. Redon, and S. Régnier. Comparing position and force control for interactive molecular simulators with haptic feedback. Journal of Molecular Graphics and Modelling, 29(2):280-289, 2010.
16. N. Diolaiti, G. Niemeyer, F. Barbagli, and J.K. Salisbury. Stability of haptic rendering: Discretization, quantization, time delay, and coulomb effects. IEEE Transactions on Robotics, 22(2):256-268, 2006.
17. A. Bolopion, B. Cagneau, S. Haliyo, and S. Régnier. Analysis of stability and transparency for nanoscale force feedback in bilateral coupling. Journal of Micro - Nano Mechatronics, (4):145-158, 2009.
18. B.R. Brooks, R.E. Bruccoleri, D.J. Olafson, D.J. States, S. Swaminathan, and M. Karplus. CHARMM: A program for macromolecular energy, minimization, and dynamics calculations. Journal of Computational Chemistry, 4:187-217, 1983.
19. C. D. Onal and M. Sitti. A scaled bilateral control system for experimental one-dimensional teleoperated nanomanipulation. The International Journal of Robotics Research, 28(4):484-497, 2009.