Haptic applications for molecular structure manipulation

Journal of Molecular Graphics and Modelling

Volumn 25, Issue 6, 2007, Pages 801-805

  Wollacott, Andrew M ^a   Merz Jr , Kenneth M ^b  

^a UNIVERSITY OF WASHINGTON   (United States)

^b UNIVERSITY OF FLORIDA   (United States)

Author keywords

Drug design; Force feedback; Haptic

Indexed keywords

COMPUTATIONAL METHODS; DRUG PRODUCTS; MOLECULAR DYNAMICS; MOLECULAR STRUCTURE;

DRUG DESIGN; FORCE FEEDBACK; INTERMOLECULAR INTERACTIONS;

HAPTIC INTERFACES;

ARTICLE; CHEMICAL STRUCTURE; METHODOLOGY; MOLECULAR INTERACTION; PRIORITY JOURNAL; SENSORY STIMULATION; TACTILE DISCRIMINATION; TECHNOLOGY; VISUAL INFORMATION; VISUAL STIMULATION;

COMPUTER GRAPHICS; DRUG DESIGN; MOLECULAR STRUCTURE; PHARMACEUTICAL PREPARATIONS; SOFTWARE;

EID: 33846886105     PISSN: 10933263     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmgm.2006.07.005     Document Type: Article

References (11)

1. R.J. Stone, Haptic feedback: a brief history from telepresence to virtual reality, Proceedings of the Haptic Human-Computer Interaction (2000) 1-16.
2. C.M. Sauer, W.A. Hastings, A.M. Okamura, Virtual environment for exploring atomic bonding, Proceedings of the Eurohaptics 2004 (2004) 232-239.
3. O.B. Bayazit, G.S.N.M. Amato, Ligand binding with OBPRM and haptic user input, Proceedings of the IEEE International Conference on Robot. Autom (2001) 954-959.
4. Nagata H., Mizushima H., and Tanaka H. Concept and prototype of protein-ligand docking simulator with force feedback technology. Bioinformatics 18 1 (2002) 140-146
5. J.G. Stone, P. Grayson, K. Schulten, A system for interactive molecular dynamics simulation, Proceedings of the ACM Symposium on Interactive 3D Graphics (2001) 191-194.
6. A. Krenek, Haptic rendering of molecular conformations, Proceedings of the Eurohaptics (2001).
7. G. Sankaranarayanan, S.Weghorst, S. Sanner,M. Gillet, A. Olson, Role of haptics in teaching structural molecular biology, Proceedings of the 11th Symposium on Haptic Interfaces for Virtual Environment and Teleoperator Systems (2003) 363-366.
8. Sensable Technologies. General Haptic Open Software Toolkit, Boston, MA.
9. D.A. Case, T.A. Darden, I.T.E. Cheatham, C.L. Simmerling, J. Wang, R.E. Duke, R. Luo, K.M. Merz, B. Wang, D.A. Pearlman, M. Crowley, S. Brozell, V. Tsui, H. Gohlke, J. Mongan, V. Hornak, G. Cui, P. Beroza, C. Schafmeister, J.W. Caldwell, W.S. Ross, P.A. Kollman, AMBER 8.0, (2004).
10. Cornell W.D., Cieplak P., Baylay C.I., Gould I.R., Merz K.M., Ferguson D.M., Spellmeyer D.C., Fox T., Caldwell J.W., and Kollman P.A. A second generation force field for the simulation of proteins, nucleic acids, and organic molecules. J. Am. Chem. Soc. 117 (1995) 5179-5197
11. DeLano W.L. The PyMOL Molecular Graphics System (2002), DeLano Scientific, San Carlos, CA, USA. http://www.pymol.org